CmaCh01G003060 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh01G003060
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Late embryogenesis abundant protein 3L-1
Location	Cma_Chr01 : 1481479 .. 1482359 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCTCGAGAATTTTCCCGAGAAACAAACGGAAAATCTATCCATGGCTCGCTCTTTCTCCGCCGTCAAGATCGCGTCGGCTCTCGTCTCCGATGGACTGTCCAACACTCTCTTCCGGTACTGAAATAAAACAATTCTCTGTTGTTCTTTTTCTTTTTTTATTAAATTTTATAAATAAAAAATACCCCTTTTTTCTGTATTAAATTATTCTGGCTTCTAACGTGCTGTGTGATCGGACAGGCGTGGGTATGCGGCGGTGGCACCACAAAGCGGTGCGGCGGCGAAAGGAGTTGCGGCAAGAATTGGCGCCAAGACGGCAAAAAGTACAGAGAAGGAGTCGTGGGTCCCAGACCCCGTCACCGGCTACTACCGGCCGGAGAATTGCGCCGCCGAGATCGACGCCGTGGACCTCCGGGCTATACTTCTGAAGGCGACAAGGAAGTAAAAATGAGTTGAAAAGCTTGGAGTGATGTCAATGAGAGCCAATTTTGGTTACAGCTGCTGGGCTATTGACTATTATTTGAAAAGTTTCTATATATAATTTTTTAAAATTATTTCATAAAAATAAATAAAAAATTTGGTCGATCAAGTAAAAAATGCTTTGTTTATGTCTCGAGTACTAATCGCAGCTCGTAATCATTCAGTTATGTTAATCTTACAACCTTGTGATTCTCGATAACTAGTTGTATCATCTCGACTTGAAATTTATAAGATGAAGAGGTTATTTGTTGATTTTAATCTTGTTTGCATAGGCTCGTGCACGTATTCATGCTCGAGAATACTAGAAGTTTTCACTTCACGCGTCTTCGCTCTTGATCGCCTCCTTTTAAAGGACATTCTTAACAGCAATATTCTTTATACCCTTAATTTTACTTGATTGGAG

mRNA sequence

TTCTCGAGAATTTTCCCGAGAAACAAACGGAAAATCTATCCATGGCTCGCTCTTTCTCCGCCGTCAAGATCGCGTCGGCTCTCGTCTCCGATGGACTGTCCAACACTCTCTTCCGGCGTGGGTATGCGGCGGTGGCACCACAAAGCGGTGCGGCGGCGAAAGGAGTTGCGGCAAGAATTGGCGCCAAGACGGCAAAAAGTACAGAGAAGGAGTCGTGGGTCCCAGACCCCGTCACCGGCTACTACCGGCCGGAGAATTGCGCCGCCGAGATCGACGCCGTGGACCTCCGGGCTATACTTCTGAAGGCGACAAGGAAGTAAAAATGAGTTGAAAAGCTTGGAGTGATGTCAATGAGAGCCAATTTTGGTTACAGCTGCTGGGCTATTGACTATTATTTGAAAAGTTTCTATATATAATTTTTTAAAATTATTTCATAAAAATAAATAAAAAATTTGGTCGATCAAGTAAAAAATGCTTTGTTTATGTCTCGAGTACTAATCGCAGCTCGTAATCATTCAGTTATGTTAATCTTACAACCTTGTGATTCTCGATAACTAGTTGTATCATCTCGACTTGAAATTTATAAGATGAAGAGGTTATTTGTTGATTTTAATCTTGTTTGCATAGGCTCGTGCACGTATTCATGCTCGAGAATACTAGAAGTTTTCACTTCACGCGTCTTCGCTCTTGATCGCCTCCTTTTAAAGGACATTCTTAACAGCAATATTCTTTATACCCTTAATTTTACTTGATTGGAG

Coding sequence (CDS)

ATGGCTCGCTCTTTCTCCGCCGTCAAGATCGCGTCGGCTCTCGTCTCCGATGGACTGTCCAACACTCTCTTCCGGCGTGGGTATGCGGCGGTGGCACCACAAAGCGGTGCGGCGGCGAAAGGAGTTGCGGCAAGAATTGGCGCCAAGACGGCAAAAAGTACAGAGAAGGAGTCGTGGGTCCCAGACCCCGTCACCGGCTACTACCGGCCGGAGAATTGCGCCGCCGAGATCGACGCCGTGGACCTCCGGGCTATACTTCTGAAGGCGACAAGGAAGTAA

Protein sequence

MARSFSAVKIASALVSDGLSNTLFRRGYAAVAPQSGAAAKGVAARIGAKTAKSTEKESWVPDPVTGYYRPENCAAEIDAVDLRAILLKATRK

Homology

[Close]

BLAST of CmaCh01G003060 vs. Swiss-Prot
Match: SAG21_ARATH (Protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial OS=Arabidopsis thaliana GN=SAG21 PE=2 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 3.9e-17
Identity = 55/95 (57.89%), Postives = 62/95 (65.26%), Query Frame = 1


Query: 1  MARSFSAVKIASALVSDGLSNTLFRRGYAAVAPQ--------SGAAAKGVAARIGAKTAK 60
          MARS S VKI SA VS  LSN +FRRGYAA A Q        SGA A  V  + G +  +
Sbjct: 1  MARSISNVKIVSAFVSRELSNAIFRRGYAATAAQGSVSSGGRSGAVASAVMKKKGVE--E 60

Query: 61 STEKESWVPDPVTGYYRPENCAAEIDAVDLRAILL 88
          ST+K SWVPDP TGYYRPE  + EIDA +LRA LL
Sbjct: 61 STQKISWVPDPKTGYYRPETGSNEIDAAELRAALL 93

[Close]

BLAST of CmaCh01G003060 vs. Swiss-Prot
Match: ARG2_VIGRR (Indole-3-acetic acid-induced protein ARG2 OS=Vigna radiata var. radiata GN=ARG2 PE=2 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 5.7e-16
Identity = 49/94 (52.13%), Postives = 62/94 (65.96%), Query Frame = 1


Query: 1  MARSFSAVKIASALVSDGLSNTLFRRGYAAVAPQSGAAAKGVAA-------RIGAKTAKS 60
          MARSF+ VK+ SALV+DG SNT  R G+AA A  + +A +G A+       + G +  + 
Sbjct: 1  MARSFTNVKVLSALVADGFSNTTTRHGFAAAAAATQSATRGGASIGGNMVPKSGEEKVRG 60

Query: 61 TEKESWVPDPVTGYYRPENCAAEIDAVDLRAILL 88
           EK SWVPDPVTGYYRPEN   EID  D+RA +L
Sbjct: 61 GEKVSWVPDPVTGYYRPEN-TNEIDVADMRATVL 93

[Close]

BLAST of CmaCh01G003060 vs. Swiss-Prot
Match: LEA5D_GOSHI (Late embryogenesis abundant protein Lea5-D OS=Gossypium hirsutum GN=LEA5-D PE=2 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 1.5e-13
Identity = 44/98 (44.90%), Postives = 56/98 (57.14%), Query Frame = 1


Query: 1  MARSFSAVKIASALVSDGLSNTLFRRGYAAVAPQSGAAAKGVAARIGAKTAKSTEKES-- 60
          MARS S+ K+  A + DGL  ++ RRGY+   P +  A+ G    +G    +   KES  
Sbjct: 1  MARSVSSFKLLGASIFDGLYVSISRRGYSGAPPAAVTASFGRPGAMGKVERRDAMKESSS 60

Query: 61 ---------WVPDPVTGYYRPENCAAEIDAVDLRAILL 88
                   W PDPVTGYYRPENC AEIDA +LR +LL
Sbjct: 61 SETRAYSSAWAPDPVTGYYRPENCGAEIDAAELREMLL 98

[Close]

BLAST of CmaCh01G003060 vs. Swiss-Prot
Match: LEA5A_GOSHI (Late embryogenesis abundant protein Lea5-A OS=Gossypium hirsutum GN=LEA5-A PE=2 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 7.6e-13
Identity = 45/98 (45.92%), Postives = 56/98 (57.14%), Query Frame = 1


Query: 1  MARSFSAVKIASALVSDGLSNTLFRRGYAAVAPQSGAAAKG-------VAARIGAKTAKS 60
          MARS S+ K   A V D L  ++ RRGY+   P +  A+ G       V  R   K + S
Sbjct: 1  MARSVSSFKFLGASVFDALYVSISRRGYSGAPPAAVTASFGRPGAMGKVERRYAMKESSS 60

Query: 61 TE----KESWVPDPVTGYYRPENCAAEIDAVDLRAILL 88
          +E      +W PDPVTGYYRPENC AEIDA DLR ++L
Sbjct: 61 SETRAYSSAWAPDPVTGYYRPENCGAEIDAADLREMML 98

[Close]

BLAST of CmaCh01G003060 vs. Swiss-Prot
Match: LEA5_CITSI (Late embryogenesis abundant protein Lea5 OS=Citrus sinensis GN=LEA5 PE=2 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 2.9e-12
Identity = 41/90 (45.56%), Postives = 54/90 (60.00%), Query Frame = 1


Query: 1  MARSFSAVKIASALVSDGLSNTLFRRGYAAVAPQSGAAAKGVAARIGAKTA---KSTEKE 60
          MARS    K+  A V+DG+S ++ RRGYAA AP    +  G+  +   + A    S    
Sbjct: 1  MARSLFKAKLLLAPVADGISLSISRRGYAAAAPLGTISRTGIMEKNDLRPAVREDSGASS 60

Query: 61 SWVPDPVTGYYRPENCAAEIDAVDLRAILL 88
          +W PDP+TGYYRPEN A EID  +LR +LL
Sbjct: 61 AWAPDPITGYYRPENRAVEIDPAELREMLL 90

[Close]

BLAST of CmaCh01G003060 vs. TrEMBL
Match: D7M417_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_327563 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.4e-16
Identity = 57/92 (61.96%), Postives = 64/92 (69.57%), Query Frame = 1


Query: 1   MARSFSAVKIASALVSDGLSNTLFRRGYAAVAPQ-----SGAAAKGVAARIGAKTAKSTE 60
           MARSFS VKI SA VS  LSN +FRRGYAA A Q     SGAAA  V  + G +  +ST+
Sbjct: 87  MARSFSNVKIVSAFVSRELSNAIFRRGYAATAAQGSGGRSGAAASAVMKKKGVE--ESTQ 146

Query: 61  KESWVPDPVTGYYRPENCAAEIDAVDLRAILL 88
           K SWVPDP TGYYRPE  + EIDA +LRA LL
Sbjct: 147 KISWVPDPKTGYYRPETGSNEIDAAELRAALL 176

[Close]

BLAST of CmaCh01G003060 vs. TrEMBL
Match: A0A061DQX0_THECC (Indole-3-acetic acid-induced protein ARG2, putative OS=Theobroma cacao GN=TCM_004676 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 3.9e-16
Identity = 52/92 (56.52%), Postives = 64/92 (69.57%), Query Frame = 1


Query: 1  MARSFSAVKIASALVSDGLSNTLFRRGYAAVAPQ--SGAAAKGVAA--RIGAKTAKSTEK 60
          MARSFS  K+ S  V+DG+SN + RRGYAA +    SG AA+  A   + G + A + EK
Sbjct: 1  MARSFSNAKLFSTFVADGISNAISRRGYAAASQGVVSGGAARNAAVVKKTGEEMAGAKEK 60

Query: 61 ESWVPDPVTGYYRPENCAAEIDAVDLRAILLK 89
           SWVPDPVTG+YRPEN A EID  +LRA+LLK
Sbjct: 61 VSWVPDPVTGFYRPENTAKEIDVAELRAMLLK 92

[Close]

BLAST of CmaCh01G003060 vs. TrEMBL
Match: W9QFH4_9ROSA (Indole-3-acetic acid-induced protein ARG2 OS=Morus notabilis GN=L484_011104 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 5.1e-16
Identity = 54/98 (55.10%), Postives = 63/98 (64.29%), Query Frame = 1


Query: 1  MARSFSAVKIASALVSDGLSNTLFRRGYAAVAPQ--------SGAAA--KGVAARIGAKT 60
          MARSFS  K  +ALV DG S  + RRG++A APQ        +GA A  + V  + G K 
Sbjct: 1  MARSFSGAKALTALVIDGFSTVITRRGFSAAAPQGVVSSVARAGATAGSRSVKKKSGEKI 60

Query: 61 AKSTEKESWVPDPVTGYYRPENCAAEIDAVDLRAILLK 89
            +TEK SWVPDPVTGYYRPEN A EID  +LRA LLK
Sbjct: 61 VGNTEKVSWVPDPVTGYYRPENGAQEIDVAELRATLLK 98

[Close]

BLAST of CmaCh01G003060 vs. TrEMBL
Match: A0A0A0K996_CUCSA (Protein induced upon tuberization OS=Cucumis sativus GN=Csa_7G398090 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 1.5e-15
Identity = 56/101 (55.45%), Postives = 64/101 (63.37%), Query Frame = 1


Query: 1   MARSFSAVKIASALVSDGLSNTLFRRGYAAVAPQSGAAAKGV------AARI-------G 60
           MARSFS  KI SA+VSDG S+ L  RGYAA A   G A+  V      AAR        G
Sbjct: 1   MARSFSNAKILSAVVSDGFSSLLSSRGYAAAAGSQGVASSAVKGGSVAAARSSNLLKKSG 60

Query: 61  AKTAKSTEKESWVPDPVTGYYRPENCAAEIDAVDLRAILLK 89
            +   +TEK SWVPDPVTGYYRPEN + EID  +LR+ILLK
Sbjct: 61  EEKVGTTEKVSWVPDPVTGYYRPENRSDEIDVAELRSILLK 101

[Close]

BLAST of CmaCh01G003060 vs. TrEMBL
Match: V7BH20_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G218700g PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 2.6e-15
Identity = 54/94 (57.45%), Postives = 62/94 (65.96%), Query Frame = 1


Query: 1  MARSFSAVKIASALVSDGLSNTLFRRGYAAVAPQSGAAAKGVAARIGAKTAKS------- 60
          MARSF+ VK+ SALV+DG SNTL RRG+AA A    A   G A+  G  T KS       
Sbjct: 1  MARSFTTVKVLSALVADGFSNTLTRRGFAAAAATQSATRGGGASISGNITPKSGEEKGRG 60

Query: 61 TEKESWVPDPVTGYYRPENCAAEIDAVDLRAILL 88
           EK SWVPDPVTGYY+PEN   EID  DLRA++L
Sbjct: 61 AEKVSWVPDPVTGYYKPEN-TNEIDVADLRAMVL 93

[Close]

BLAST of CmaCh01G003060 vs. TAIR10
Match: AT4G02380.1 (AT4G02380.1 senescence-associated gene 21)

HSP 1 Score: 88.6 bits (218), Expect = 2.2e-18
Identity = 55/95 (57.89%), Postives = 62/95 (65.26%), Query Frame = 1


Query: 1  MARSFSAVKIASALVSDGLSNTLFRRGYAAVAPQ--------SGAAAKGVAARIGAKTAK 60
          MARS S VKI SA VS  LSN +FRRGYAA A Q        SGA A  V  + G +  +
Sbjct: 1  MARSISNVKIVSAFVSRELSNAIFRRGYAATAAQGSVSSGGRSGAVASAVMKKKGVE--E 60

Query: 61 STEKESWVPDPVTGYYRPENCAAEIDAVDLRAILL 88
          ST+K SWVPDP TGYYRPE  + EIDA +LRA LL
Sbjct: 61 STQKISWVPDPKTGYYRPETGSNEIDAAELRAALL 93

[Close]

BLAST of CmaCh01G003060 vs. TAIR10
Match: AT1G02820.1 (AT1G02820.1 Late embryogenesis abundant 3 (LEA3) family protein)

HSP 1 Score: 73.9 bits (180), Expect = 5.6e-14
Identity = 43/87 (49.43%), Postives = 52/87 (59.77%), Query Frame = 1


Query: 1  MARSFSAVKIASALVSDGLSNTLFRRGYAAVAPQSGAAAKGVAARIGAKTAKSTEKESWV 60
          MARS +  KI S   S+ LSN +FRRG+AA A  +   +   A         S+EK  WV
Sbjct: 1  MARSLANAKIQSVFGSEKLSNAVFRRGFAAAAKTALDGSVSTAEMKKRAGEASSEKAPWV 60

Query: 61 PDPVTGYYRPENCAAEIDAVDLRAILL 88
          PDP TGYYRPE  + EID  +LRAILL
Sbjct: 61 PDPKTGYYRPETVSEEIDPAELRAILL 87

[Close]

BLAST of CmaCh01G003060 vs. TAIR10
Match: AT4G15910.1 (AT4G15910.1 drought-induced 21)

HSP 1 Score: 57.0 bits (136), Expect = 7.1e-09
Identity = 44/100 (44.00%), Postives = 57/100 (57.00%), Query Frame = 1


Query: 2   ARSFS-AVKIASALVSDGLS-NTLFRRGYAAVAPQSGAA--AKGVAARI--GAKTAKSTE 61
           ARS S AVK   +  S  LS + + RR Y A +    AA  +KG + R+  G    +  +
Sbjct: 3   ARSLSGAVKSLCSAASGSLSCSIVLRRSYVATSQNVTAAGLSKGGSTRVMVGKMEQRGLD 62

Query: 62  KES---WVPDPVTGYYRPENCAAEIDAVDLRAILLKATRK 93
           +E+   W PDPVTGYYRP N AAEID  +LR +LLK   K
Sbjct: 63  QEAESAWGPDPVTGYYRPSNRAAEIDPAELRELLLKNKAK 102

[Close]

BLAST of CmaCh01G003060 vs. TAIR10
Match: AT3G53770.1 (AT3G53770.1 late embryogenesis abundant 3 (LEA3) family protein)

HSP 1 Score: 48.5 bits (114), Expect = 2.5e-06
Identity = 19/34 (55.88%), Postives = 26/34 (76.47%), Query Frame = 1


Query: 59  WVPDPVTGYYRPENCAAEIDAVDLRAILLKATRK 93
           W+PDP TGYYRP+N A E+DAV+LR++     +K
Sbjct: 86  WMPDPQTGYYRPDNFARELDAVELRSLHFNKNQK 119

[Close]

BLAST of CmaCh01G003060 vs. NCBI nr
Match: gi|297809919|ref|XP_002872843.1| (hypothetical protein ARALYDRAFT_327563 [Arabidopsis lyrata subsp. lyrata])

HSP 1 Score: 93.6 bits (231), Expect = 1.9e-16
Identity = 57/92 (61.96%), Postives = 64/92 (69.57%), Query Frame = 1


Query: 1   MARSFSAVKIASALVSDGLSNTLFRRGYAAVAPQ-----SGAAAKGVAARIGAKTAKSTE 60
           MARSFS VKI SA VS  LSN +FRRGYAA A Q     SGAAA  V  + G +  +ST+
Sbjct: 87  MARSFSNVKIVSAFVSRELSNAIFRRGYAATAAQGSGGRSGAAASAVMKKKGVE--ESTQ 146

Query: 61  KESWVPDPVTGYYRPENCAAEIDAVDLRAILL 88
           K SWVPDP TGYYRPE  + EIDA +LRA LL
Sbjct: 147 KISWVPDPKTGYYRPETGSNEIDAAELRAALL 176

[Close]

BLAST of CmaCh01G003060 vs. NCBI nr
Match: gi|659101343|ref|XP_008451558.1| (PREDICTED: indole-3-acetic acid-induced protein ARG2-like [Cucumis melo])

HSP 1 Score: 92.0 bits (227), Expect = 5.7e-16
Identity = 58/102 (56.86%), Postives = 64/102 (62.75%), Query Frame = 1


Query: 1   MARSFSAVKIASALVSDGLSNTLFRRGYAAVAPQSGAAAK-----GVAARIGAKTAK--- 60
           MARSFS VKI SA+VSDG S+ L  RGYAA A   G A+      GVAA   +   K   
Sbjct: 1   MARSFSNVKILSAVVSDGFSSLLTSRGYAAAAGSQGVASSAVKGAGVAAARSSNLLKKSG 60

Query: 61  ------STEKESWVPDPVTGYYRPENCAAEIDAVDLRAILLK 89
                 STEK SWVPDPVTGYYRPEN   EID  +LR+ILLK
Sbjct: 61  EEKVVGSTEKVSWVPDPVTGYYRPENRCDEIDVAELRSILLK 102

[Close]

BLAST of CmaCh01G003060 vs. NCBI nr
Match: gi|590719079|ref|XP_007050958.1| (Indole-3-acetic acid-induced protein ARG2, putative [Theobroma cacao])

HSP 1 Score: 92.0 bits (227), Expect = 5.7e-16
Identity = 52/92 (56.52%), Postives = 64/92 (69.57%), Query Frame = 1


Query: 1  MARSFSAVKIASALVSDGLSNTLFRRGYAAVAPQ--SGAAAKGVAA--RIGAKTAKSTEK 60
          MARSFS  K+ S  V+DG+SN + RRGYAA +    SG AA+  A   + G + A + EK
Sbjct: 1  MARSFSNAKLFSTFVADGISNAISRRGYAAASQGVVSGGAARNAAVVKKTGEEMAGAKEK 60

Query: 61 ESWVPDPVTGYYRPENCAAEIDAVDLRAILLK 89
           SWVPDPVTG+YRPEN A EID  +LRA+LLK
Sbjct: 61 VSWVPDPVTGFYRPENTAKEIDVAELRAMLLK 92

[Close]

BLAST of CmaCh01G003060 vs. NCBI nr
Match: gi|703068640|ref|XP_010088289.1| (Indole-3-acetic acid-induced protein ARG2 [Morus notabilis])

HSP 1 Score: 91.7 bits (226), Expect = 7.4e-16
Identity = 54/98 (55.10%), Postives = 63/98 (64.29%), Query Frame = 1


Query: 1  MARSFSAVKIASALVSDGLSNTLFRRGYAAVAPQ--------SGAAA--KGVAARIGAKT 60
          MARSFS  K  +ALV DG S  + RRG++A APQ        +GA A  + V  + G K 
Sbjct: 1  MARSFSGAKALTALVIDGFSTVITRRGFSAAAPQGVVSSVARAGATAGSRSVKKKSGEKI 60

Query: 61 AKSTEKESWVPDPVTGYYRPENCAAEIDAVDLRAILLK 89
            +TEK SWVPDPVTGYYRPEN A EID  +LRA LLK
Sbjct: 61 VGNTEKVSWVPDPVTGYYRPENGAQEIDVAELRATLLK 98

[Close]

BLAST of CmaCh01G003060 vs. NCBI nr
Match: gi|1009174807|ref|XP_015868536.1| (PREDICTED: indole-3-acetic acid-induced protein ARG2-like [Ziziphus jujuba])

HSP 1 Score: 90.1 bits (222), Expect = 2.1e-15
Identity = 51/97 (52.58%), Postives = 61/97 (62.89%), Query Frame = 1


Query: 1  MARSFSAVKIASALVSDGLSNTLFRRGYAAVAPQ---------SGAAAKGVAARIGAKTA 60
          MARSFS  K+ SALV DG S  + RRGYAA +           +G + + V  + G +  
Sbjct: 1  MARSFSNAKLLSALVVDGFSTAISRRGYAAASQGVVSSVARGGAGGSGRNVVKKSGEEIV 60

Query: 61 KSTEKESWVPDPVTGYYRPENCAAEIDAVDLRAILLK 89
           STEK SW PDPVTGYYRPEN A EID  +LRA+LLK
Sbjct: 61 GSTEKVSWTPDPVTGYYRPENGAQEIDVAELRAMLLK 97

The following BLAST results are available for this feature:

BLAST of CmaCh01G003060 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SAG21_ARATH	3.9e-17	57.89	Protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial OS=Arabidopsis thaliana GN=...	[more]
ARG2_VIGRR	5.7e-16	52.13	Indole-3-acetic acid-induced protein ARG2 OS=Vigna radiata var. radiata GN=ARG2 ...	[more]
LEA5D_GOSHI	1.5e-13	44.90	Late embryogenesis abundant protein Lea5-D OS=Gossypium hirsutum GN=LEA5-D PE=2 ...	[more]
LEA5A_GOSHI	7.6e-13	45.92	Late embryogenesis abundant protein Lea5-A OS=Gossypium hirsutum GN=LEA5-A PE=2 ...	[more]
LEA5_CITSI	2.9e-12	45.56	Late embryogenesis abundant protein Lea5 OS=Citrus sinensis GN=LEA5 PE=2 SV=1	[more]

BLAST of CmaCh01G003060 vs. TrEMBL


Match Name	E-value	Identity	Description
D7M417_ARALL	1.4e-16	61.96	Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRA...	[more]
A0A061DQX0_THECC	3.9e-16	56.52	Indole-3-acetic acid-induced protein ARG2, putative OS=Theobroma cacao GN=TCM_00...	[more]
W9QFH4_9ROSA	5.1e-16	55.10	Indole-3-acetic acid-induced protein ARG2 OS=Morus notabilis GN=L484_011104 PE=4...	[more]
A0A0A0K996_CUCSA	1.5e-15	55.45	Protein induced upon tuberization OS=Cucumis sativus GN=Csa_7G398090 PE=4 SV=1	[more]
V7BH20_PHAVU	2.6e-15	57.45	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G218700g PE=4 SV=1	[more]

BLAST of CmaCh01G003060 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G02380.1	2.2e-18	57.89	senescence-associated gene 21	[more]
AT1G02820.1	5.6e-14	49.43	Late embryogenesis abundant 3 (LEA3) family protein	[more]
AT4G15910.1	7.1e-09	44.00	drought-induced 21	[more]
AT3G53770.1	2.5e-06	55.88	late embryogenesis abundant 3 (LEA3) family protein	[more]

BLAST of CmaCh01G003060 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|297809919\|ref\|XP_002872843.1\|	1.9e-16	61.96	hypothetical protein ARALYDRAFT_327563 [Arabidopsis lyrata subsp. lyrata]	[more]
gi\|659101343\|ref\|XP_008451558.1\|	5.7e-16	56.86	PREDICTED: indole-3-acetic acid-induced protein ARG2-like [Cucumis melo]	[more]
gi\|590719079\|ref\|XP_007050958.1\|	5.7e-16	56.52	Indole-3-acetic acid-induced protein ARG2, putative [Theobroma cacao]	[more]
gi\|703068640\|ref\|XP_010088289.1\|	7.4e-16	55.10	Indole-3-acetic acid-induced protein ARG2 [Morus notabilis]	[more]
gi\|1009174807\|ref\|XP_015868536.1\|	2.1e-15	52.58	PREDICTED: indole-3-acetic acid-induced protein ARG2-like [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004926	LEA_3

Vocabulary: **Biological Process**
Term	Definition
GO:0006950	response to stress

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071229	cellular response to acid chemical
biological_process	GO:0071310	cellular response to organic substance
biological_process	GO:1901701	cellular response to oxygen-containing compound
biological_process	GO:0033554	cellular response to stress
biological_process	GO:0006952	defense response
biological_process	GO:0009605	response to external stimulus
biological_process	GO:0007165	signal transduction
biological_process	GO:0006950	response to stress
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh01G003060.1	CmaCh01G003060.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004926	Late embryogenesis abundant protein, LEA5-type	PFAM	PF03242	LEA_3	coord: 1..87 score: 5.1
None	No IPR available	PANTHER	PTHR33509	FAMILY NOT NAMED	coord: 1..88 score: 2.7
None	No IPR available	PANTHER	PTHR33509:SF5	LATE EMBRYOGENESIS ABUNDANT 3 (LEA3) FAMILY PROTEIN	coord: 1..88 score: 2.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh01G003060	Cla015092	Watermelon (97103) v1	cmawmB407
CmaCh01G003060	ClCG09G005640	Watermelon (Charleston Gray)	cmawcgB377
CmaCh01G003060	CmoCh17G010560	Cucurbita moschata (Rifu)	cmacmoB466
CmaCh01G003060	CmoCh01G003190	Cucurbita moschata (Rifu)	cmacmoB468
CmaCh01G003060	Cp4.1LG12g05650	Cucurbita pepo (Zucchini)	cmacpeB465
CmaCh01G003060	MELO3C017950.2	Melon (DHL92) v3.6.1	cmamedB501

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh01G003060	CmaCh17G010820	Cucurbita maxima (Rimu)	cmacmaB360

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh01G003060	Cucumber (Gy14) v2	cgybcmaB516
CmaCh01G003060	Silver-seed gourd	carcmaB1059
CmaCh01G003060	Silver-seed gourd	carcmaB1134
CmaCh01G003060	Cucumber (Chinese Long) v3	cmacucB0567
CmaCh01G003060	Watermelon (97103) v2	cmawmbB445
CmaCh01G003060	Wax gourd	cmawgoB0553
CmaCh01G003060	Cucurbita maxima (Rimu)	cmacmaB255
CmaCh01G003060	Cucumber (Gy14) v1	cgycmaB0199
CmaCh01G003060	Cucurbita moschata (Rifu)	cmacmoB462
CmaCh01G003060	Wild cucumber (PI 183967)	cmacpiB478
CmaCh01G003060	Cucumber (Chinese Long) v2	cmacuB475
CmaCh01G003060	Melon (DHL92) v3.5.1	cmameB434
CmaCh01G003060	Watermelon (Charleston Gray)	cmawcgB387
CmaCh01G003060	Watermelon (97103) v1	cmawmB416
CmaCh01G003060	Cucurbita pepo (Zucchini)	cmacpeB491
CmaCh01G003060	Cucurbita pepo (Zucchini)	cmacpeB494
CmaCh01G003060	Bottle gourd (USVL1VR-Ls)	cmalsiB422