Cp4.1LG09g07810 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG09g07810
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionPrefoldin subunit 6
LocationCp4.1LG09 : 7158130 .. 7165725 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGCTATATATATGTTAATTTAACCTCGTCTTCGAATCTCCCAACAGATTTCCGCGCGTAGGTAGCGAAGGAAGTCGACGATTCGGTCAGTATGAGTTCCACAAGCGTTCTTCGAGAGCTACAGCGCGAGTTGGAGACGAAAGCCAACGATCTCAGCAAGCTACAAAAAGGTGAGCCTCTAATCGATTCTCGTTTACTTCCTGTTCATACGATCAGCAAGATTTATGGAAACATCAATGTTTTAATCAAATGCTGTGTCGATTGTTCTATCTGGATTCAATATTAACTATTTACTTGCCAAAAAGCCTTACATGGTGATCGATTCTTCAGATATTGCGAAGAATCACCAAGTGAGGAAGAAATACACTATTCAACTTGGTGAGAACGAGCTCGTCCTCAAGGTTTTGCCATTCCTTTCACTTGTCTTTATCGTGTTTTCAAGTATATATTCGTGCATAGTTTTGGTGACTTGAGTATTTCTATCTGTGAAGAAGTGTTGCAAAATAACAGAATTGATTTTATAGAATTTTCCCTTCCTGGTTTCAACTCAAACATTCATGTGTTATAATGGACTATGTTTCAAATCAAGTGAAAAAATCTGGTGTACAATAAGAATTTGAAGCATTCATATCGGTGGACATTTTTTTTATCAGCATAATTCTTTGCTACAAGGTGTGAACCTTTTTTTTCTTTCTTTTCTTGTCTGCTTACATACAGGAATTGGATCTACTCAGAGATGACGCAAATGTATTTAAACTGATTGGTCCAGTGCTCGTGAAGCAGGATCTGGCAGAAGCAAATGCAAACGTGCGCAAGAGAATTGATTACATCTCTGCAGAATTGTATGTTTTATTTTTCATTATTTTTTCCTTTTTGGTTTTTTAGGTCATGGATAGTAGTGACTCTAATACAGTAATACCAATCATTTGAAAACCATCATTAAACTAATTACTCGATGTGATTTTTTTCAAAGGTCATGGATAGTAGTGACTCTAATACAGTAATACCAATCATTTGAAAACCATCATTAAACTAATTACTCGATGTGATTTTTTTCAAAGTGTCTTCTTCATTTTACATTTCTCTTATGTCTCTAGGTTATCAAGTTGTTACTTTGTTTTAAATGAGGTGGTTTTTTTAGCTTTTGGACGATTCTAACTTAGCCGTAGTTGATTGTATTATGACTCTGTATGTGTTGAAACTCGTAAGCCCTTGTCAGGCATACTATTTGAAACATTTAGCTATGATTGTGAAAAGTAATGGGGCAAGAGAAACACCTTGTTTACAGCCTTTATGATGTAGCAGGATTAGTGGTTAATTCCTTGGTTAATTATGATTATGATTATGATTAGTTTGTTTGGTTAATTCCTTGGTTAATTAAAATTAAGATTAAGATTAAGATTAGTTTGTTTGGTTAATTCCTTGGTTAATTAAGATCAAGATTAGTCGTCTGATTTCTTGGTTAATTAGGATTATGATAAGTTTGTTTGGTGAATTCGTTGTTTAATTAGGATTATGATTAGTTTGTTTTCCAATTCTCCATAAGCCCCTCTTGTATTCCTAACTTTTTATTCTTAATAAATATTTGATTGTTTTATGGAGAGAATTTATCTTCTTAGGTTACACCAAATTAGAATCAGAACAATCATTTGAGCCAATAATGGCTGTCGTCCGGGGAGGATTGAAAAACTCCTGTTGATGCTGATCACAAGAGGGAGTTTTGTGAGTTGTGCTTGTTGTTCAACAACTCACATTTATATACAAGAGGTTTCTTTCAGAGTATTCCCTTTTCAAGAAACAGGGAAGAATATTCAAGAATGAAATTTTGCTACACAAGAAGACAGTTCAAAGCCACTAAATCCACTTTAGGATTTGGATCATGGCCAATGGAGGTAAAAAATTATTCAAGGACACACCTAAATCTCTACATAGATTGTGAAGCCTTGGGGGGAATCAAGAACGGGGTGGTCGAAATCTATCAAATTTTGGATAAAATGTTTAGCAATTTTGATCCATGTAATCAAAAAGTTCAATACGTGTGAGAACTTGCTCGACCGAAGTTATCATGCAATTATTTCAAAATTCCATGTGTAACAAAGGAAGGTGAAAAACATTCAATCGTGTGAAGCGAAGGTGATGAAACAAACAAAATAGAAATTGCTCGAAACTATGTAATTGTGCAATAGGAATCTAAAGAACCTCGACTGAAATTCTATTGTGAAGAAGGAAGGAAAATTGATGCAGTAGGTGCGTAACTTTTGGGAGAGATAGAATATGATGAAGGAGAATTAGTGGTTAATTAAATATTTTTGTTAATTTCATGGTTAAGTAGGATTATGATTAGATTGTTTAGTTAATTCCGTAGTTAATTAAAATGAGGATTAATTTGTTTGGTTAATTAGGATGAGGATTAGTTTGTTTGATTAATTCCTTGTATAATTATGATTCAGATTTGTTTGCTTTTCCAATTCTCTATAAATAGAGAATTGCCTCTCTTGTATTCTTGACTTTTCATTTATAATAACTGTTTGATTGATTCTTGGAGAGATAGCTCTTCGTACCCTCTTAGGCTACACCGCTTTACAGGCTTGATAAGTCCTACAAGCTTATTTTATTGTCAAGGAAAATGGAAAACAAAATGTGGGAGATGCAGACATGCCTCCAAGATTTCCATTTGGGGCCAAAGTCTTTCCTTGCAAGAACCTTGAGAAAATAATGTATTGAGCTTTTTAAAAGTTAATCTTCATAACTCACCTCCCCATTTGCCTTATGAACATAGCTTAGCATAGCAGTTATAACATCTAACTTTTCAATCACGATAAAGATGTATTGATTCTTGGAGAGAGTTCTCTTTTTATCCTCTTAGACTACACTACTTCACAGGCTTGATAAGACCTAGAGGCTTATTTTATTGTTTAGGAAGATGGAAAGTAAAATGTGGGAGATGCAAGCATGTCTTCAAGAAAGTCTTTCTTTATAAGAACGAACCTCGTGAAAATCTTGATCTATCATGTATCGAGTTTTTTCAAAGTCGGAATCCTCATAATTCACCTACCCACTTACCAGCATGAGCATAGTTTAGCAGTTAAAATATCTACTTCTCTCCTTGAGATCAAAGCTTCAAGTTCCATGTCTACTTACTTTTCCGGTAAAAAGGGCTGTTTCACTCTTGAACAAGGGAAAGAAAGACTCAAGATTAACGATCCTGAACTCCGGCTCCTTTGACTGAGTAAATGAATTAGCAGCTTTTGCTCGGTGAATAAGAAGAGTTTACAGTCTTTGTTGAATAAAGGGAAAGACTCAACTCAAGAAGAATTAGACTGAAGCAAGACAATAAAGAGTAAATGAATTAGTTACTTCACCCGGAATCAGGCCGGAAGGAAAGAGAGAGAAGCTCATGAACCTCTACAACTATTGGTCGAGCGGCTTCTCTCCTGCACCTGAACCTATCGTATTCCATCTTTGTTTTACTAAAAAAAGCTTCATACTCCACCCTTTTTCTTCCTCTCTTTATAGTTATCCACTATCTTGCTGTCAAGTAAATGGAATCAACTATTTGACGATTAGGAACATTTTGTTGTCAAGTAAATGGAATCAACTATTCCATTCCATCTTTCAGCTTGTTCAGAAGCACATTGGAACATTTTGTAAAGTCTACTTTTACCAAATTGATGGGATGATGTTAGATACTTTGAGAAACCCTCTCTTTCTTTGGAATCAGACTAAAAGAAGTCTGATTAATGTAAAAGGTAAGAACATCCGGCTCAAGGAACTTCTGAAGCACCTCAAGCAGATTATTTTTTGGTAAATATTCCAACACTTATTTAAAAATTCAGAAGAGTGACTATCTGGGCCTGGAGCTTTGTAAGTTTCAAGTTTATTGGCTGTTTTAATCTCTTACACGGATACAAGCCTTTCCAAATGTTGACCATCTTCCTAGATATAGGTCTCTGTCCCAACTTGGTGAGAAAACAAGATAGGGAATCTTTTTTTCTTTTGGTTTGAGAGGAGATAAGAACTTATTGAGTCAAATTATACTTATTAGAAGGCTAGAATGAAAATTTATTTGCAATCAGTTGATTATCATTTATGGTTAAATGTTTGCAAATATCTTACATTCTAATGAAAATTGTTAATAATATTGAAGTGTCTAAATTAGAAGAATTTGATGAGCATGATATGAAAAAATGTTCCTTTAATGCTAGTGCTATAAATTGTTTTTATTGTGCTTTAAGTAGTGATGAATTTAATAAAGTGTTTGTGTTCTTCTGCAAATGAAATTTGGAGAACTTTCAAAGTAACTCCGGAGGGAACAAATCAAGTTAATTAGCATGTTAGTCCATACTTATGAACTATTTTAAATGGAGGTAAATGAGTCTATGGTTGATATGTTTACTAGATTTACTAATATTATAAATACTTTAAAAAATCTTGGCAAAGTATATTCTACCTTCGAAAATGTAAAGGATTCCACAAAATTTCGAAAATGAGTTTCTTCAAAGAAAGTATTTATGAGATCCTTTACCTTTTGAATTGCTTATAATATTAGTAAGTAAATCTAGTGAACATATCAACAATATATTTATTTACATCCATTTTGAATAGTTCATAATTATGGACTAACATGTTAATTTTTGTATCTTTTAACTTGTAGAAGAACACAGACATTCGGTTAAATTCATCGTTACTCAAGGCACAATAAAAACAATTTATAGCACTAACATTAAAGGATATCATGCTCATCAAATACCTCTCCTAATTTAGGTACTTCAATGTTATTAACAATTTTCATTGGAATGTAAGGACCTTTACTAACATTTAACCATAAATGATAATCAACTAATTGCAAATAAATTTTCATTCTAGCCTTCCATTCAGTAGAATTTGGCCCATCAAAATAAGGAGGTCGAGAGATAGATTATCCTTTAATAATGCCGTTATTAACTCGTAGGTTTGCCATATACTCGAACAATAAAGTTTATGAAAAGAAATTGAGCAACTTGCTTTAATACCAATTGTTGGATTAGGATGAATAGGGTTTGGACAATAAGTTATTTAAATTATTTTATTTTATTTTTTATTTTCAAACTTTTATCAATTGAATGTCACAATTAATACGACAAGTGTATAAATAATTCAATTTAAGATAATAAACAATTAAAAACAAAACTAACAAATCACAATAATAATTTCAAAATTAAGGGAGATAAAGTTGGAGAAAGTAACATTGTAATTTTAGAGTAGTTCAGTCAAATTCGACCTACTCCACTGTCTAAGTGCCTTTTGGGAATTTGAATAAAAACTTTCTCGACTCTTTCCTCGAATCAGACAAAACCGTAATACTGCTCATTTTACGAGTTGAAGAGCAAACTCAATCATTTCCAGAACTTAGAACCAAACCAGTTCAAATGTTGGAATTTTTGAAGAATGGACCACAACTCTCTCAATAGTAGATTAACAATTTAAGTACTCACAACAATATCCTGAAATTGGAAGCTTGGGAAGAGCAACCATACGGATTTTAGAAAGAGAGAGGATTAAAAGTGTAGAAGAATTGTGTATCAGAAATTGGAAGCTAGGGAAGAGCAACAATAGGGATTTTAGTAAGAGAGAGGATTAAGAATTGTAGAAGAATTGTTTGTGAGTAAAGAGAAGAAAGTGTGTTTAAATAGGAACAGGAGTTGCTCAAATCATGACTTAATTTGAAATAGTCACCTTCCAAAACTTCATGCGTCATAGTTTGATAGTTTGATTGGTCCATGATGACAATTCAGCTGCCATGTCATTTTGTTAGGTATTTTTTACTCCATTTTGTTTCGACTATAACGACTTGAGTTCTAAACAACAAAAAGGTTACAAGGTAGAGGTGGGTAGCGAAAACTTGTGTCGAAGGACGTTTTTGAAAGATAATGCTCCGAATATAAAAAGAAAAATACTATGGCTACAAAAATATTTCACATCTTTTCTCTACTGCCTGTATCTTTTTCTTTCTGAACAAAGAGACGTAAATTGGTTGGAGATAGCCTTTCTGCAAAGGAAAGGTTATTAGGAGGAAGGGTCCTCAAGGTTTTGATAATGCAGGTTTATGGAGGGAAAGGCTGTTCAACCATTTTTTCTCAATAGCTGGTGGAACAACCTATTTTTTCTTCCTACTGTTGCCTCCCAGATGGAGATGTTGAGAGAGAGTTGAACACAGGGAAGAGCATAAATGAAAAGAGGGAAATATAGATCAAACAAGAAAGCAGAGTCGATCTTTCAAATCTATTTCCTTGCATTTTGTTCTTTATCATTTATGGCATTCTTCTTCCATATACGTTAACGATAGTGATAATATAGCTTTCTCATGCCAGTCGCCATTTTCATGCGTTTAATTCAATAATATTTACACAATTCAGGAAACGTCTGGATTCAGCCCTTCAAGATTTGGAAGAGAAGCAAAATAGCAAGAGAGACGCTGTATGTTCTTCTCATACCTCTATAGATCTTAAATTTAACCCTTTGGCTGATATTTGTAGGACCTCAACAAAAAGCAATAAAACATTTTTATTTTGTGTATGATTCTTGCATGTTTTGTTGGAGGATCCAGAAATGATTGTTTGAAAACAAAGAAAATGAAATCTGAACTTCTGATAAGAGAATGAAATCTGAACTTGATTCAAAACAATAGGTAAATTGAGAAATTCTTTGTGAGAACAGAAATGATTCTTGCATGTTTCTTCCTCTTTCAGATTCATTTTAATCTTTTATATTTCTTTCCCAATACAAAAGAGTTACAATAAACTTATCCAATTGAACAAAAAGTAGCAAAGCTATAAGAATGAAAGTGTGGGGACGATTTACCCAAGTATTTGAGGCTCTTTAGCAATAGTATCAACACGAGAGGTGAATTTCAATAAAGAGCTTGAGTCATGAACTCACTTCAAGTTCTTAAGATTATGGATAGAACGATTGAGTAGAGTTGAGATAACCGAGCCATAGATATGCGAGTTACCAGTCATGACTTAAACACCTTAAACGTTCTTTATTGAACACATTAGGTTTGATCGTTAAGAGGAAATGATTGGCCCAAGTGGCGATTTATTGAAGATTACTTATTGTTGGTTTTCTGTTTTCCAGATATTGAAGTTACAGCAGAGGAGTCAATCTCTGCAGGCTGGAAAAGCTAAAGCATAACATGTTCTGTTGTTTTCTTATATGTACGTCCTAAACTTCTGTTTATTTTTTTGCAATCTCTCTTGTACCAGTTAAAGATGCACTGCTCACCCAAATGCTTGACAATATTTAGTTAATTCAATTTTTATAATAAATTTGTGCCTTGCATCTGTTGAACTTTTATACTTCTTGCAAAGTATTTACTGAGAACTTGGCATCCTCTAAAAATTATTTAGCATATGTTTATTGACAAAACTTGGCATCTTCAAGGAAGAAGTATTGATGTTAAATTGCTTCTGAATTTCAAGGGTATAAGGGGTGTTTTATCCATTCTAGGGTGGTGTCTGCCACATTGGTCTAAATGGACTTTTGCTATGATTATTGTAGGGTCTAAATGGACGTTGGCAGGATATTTAGCCTTAAATTATGTACCATATGTATCATA

mRNA sequence

AGCTATATATATGTTAATTTAACCTCGTCTTCGAATCTCCCAACAGATTTCCGCGCGTAGGTAGCGAAGGAAGTCGACGATTCGGTCAGTATGAGTTCCACAAGCGTTCTTCGAGAGCTACAGCGCGAGTTGGAGACGAAAGCCAACGATCTCAGCAAGCTACAAAAAGATATTGCGAAGAATCACCAAGTGAGGAAGAAATACACTATTCAACTTGGTGAGAACGAGCTCGTCCTCAAGGAATTGGATCTACTCAGAGATGACGCAAATGTATTTAAACTGATTGGTCCAGTGCTCGTGAAGCAGGATCTGGCAGAAGCAAATGCAAACGTGCGCAAGAGAATTGATTACATCTCTGCAGAATTGAAACGTCTGGATTCAGCCCTTCAAGATTTGGAAGAGAAGCAAAATAGCAAGAGAGACGCTATATTGAAGTTACAGCAGAGGAGTCAATCTCTGCAGGCTGGAAAAGCTAAAGCATAACATGTTCTGTTGTTTTCTTATATGGTCTAAATGGACGTTGGCAGGATATTTAGCCTTAAATTATGTACCATATGTATCATA

Coding sequence (CDS)

ATGAGTTCCACAAGCGTTCTTCGAGAGCTACAGCGCGAGTTGGAGACGAAAGCCAACGATCTCAGCAAGCTACAAAAAGATATTGCGAAGAATCACCAAGTGAGGAAGAAATACACTATTCAACTTGGTGAGAACGAGCTCGTCCTCAAGGAATTGGATCTACTCAGAGATGACGCAAATGTATTTAAACTGATTGGTCCAGTGCTCGTGAAGCAGGATCTGGCAGAAGCAAATGCAAACGTGCGCAAGAGAATTGATTACATCTCTGCAGAATTGAAACGTCTGGATTCAGCCCTTCAAGATTTGGAAGAGAAGCAAAATAGCAAGAGAGACGCTATATTGAAGTTACAGCAGAGGAGTCAATCTCTGCAGGCTGGAAAAGCTAAAGCATAA

Protein sequence

MSSTSVLRELQRELETKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLRDDANVFKLIGPVLVKQDLAEANANVRKRIDYISAELKRLDSALQDLEEKQNSKRDAILKLQQRSQSLQAGKAKA
Homology
[Close]
BLAST of Cp4.1LG09g07810 vs. Swiss-Prot
Match: PFD6_BOVIN (Prefoldin subunit 6 OS=Bos taurus GN=PFDN6 PE=2 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 8.2e-21
Identity = 58/121 (47.93%), Postives = 83/121 (68.60%), Query Frame = 1 

Query: 10  LQRELETKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLRDDANVFKLIGPVL 69
           +Q++L+ +     +LQKD++K+   R+K   QL EN +V +EL LL     VFKL+GPVL
Sbjct: 5   IQKKLQGEVEKYQQLQKDLSKSMSGRQKLEAQLTENNIVKEELALLDGSNVVFKLLGPVL 64

Query: 70  VKQDLAEANANVRKRIDYISAELKRLDSALQDLEEKQNSKRDAILKLQQRSQSLQAGKAK 129
           VKQ+L EA A V KR+DYI+AE+KR +S L+DLE++   +R+ + +LQQ  Q  QA KA 
Sbjct: 65  VKQELGEARATVGKRLDYITAEIKRYESQLRDLEQQSEQQRETLAQLQQEFQRAQAAKAG 124

Query: 130 A 131
           A
Sbjct: 125 A 125

[Close]
BLAST of Cp4.1LG09g07810 vs. Swiss-Prot
Match: PFD6_HUMAN (Prefoldin subunit 6 OS=Homo sapiens GN=PFDN6 PE=1 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 1.4e-20
Identity = 58/121 (47.93%), Postives = 82/121 (67.77%), Query Frame = 1 

Query: 10  LQRELETKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLRDDANVFKLIGPVL 69
           +Q++L+ +     +LQKD++K+   R+K   QL EN +V +EL LL     VFKL+GPVL
Sbjct: 5   IQKKLQGEVEKYQQLQKDLSKSMSGRQKLEAQLTENNIVKEELALLDGSNVVFKLLGPVL 64

Query: 70  VKQDLAEANANVRKRIDYISAELKRLDSALQDLEEKQNSKRDAILKLQQRSQSLQAGKAK 129
           VKQ+L EA A V KR+DYI+AE+KR +S L+DLE +   +R+ + +LQQ  Q  QA KA 
Sbjct: 65  VKQELGEARATVGKRLDYITAEIKRYESQLRDLERQSEQQRETLAQLQQEFQRAQAAKAG 124

Query: 130 A 131
           A
Sbjct: 125 A 125

[Close]
BLAST of Cp4.1LG09g07810 vs. Swiss-Prot
Match: PFD6_CANLF (Prefoldin subunit 6 OS=Canis lupus familiaris GN=PFDN6 PE=3 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 1.4e-20
Identity = 58/121 (47.93%), Postives = 82/121 (67.77%), Query Frame = 1 

Query: 10  LQRELETKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLRDDANVFKLIGPVL 69
           +Q++L+ +     +LQKD++K+   R+K   QL EN +V +EL LL     VFKL+GPVL
Sbjct: 5   IQKKLQGEVEKYQQLQKDLSKSMSGRQKLEAQLTENNIVKEELALLDGSNVVFKLLGPVL 64

Query: 70  VKQDLAEANANVRKRIDYISAELKRLDSALQDLEEKQNSKRDAILKLQQRSQSLQAGKAK 129
           VKQ+L EA A V KR+DYI+AE+KR +S L+DLE +   +R+ + +LQQ  Q  QA KA 
Sbjct: 65  VKQELGEARATVGKRLDYITAEIKRYESQLRDLERQSEQQRETLAQLQQEFQRAQAAKAG 124

Query: 130 A 131
           A
Sbjct: 125 A 125

[Close]
BLAST of Cp4.1LG09g07810 vs. Swiss-Prot
Match: PFD6_MOUSE (Prefoldin subunit 6 OS=Mus musculus GN=Pfdn6 PE=1 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.8e-20
Identity = 57/119 (47.90%), Postives = 81/119 (68.07%), Query Frame = 1 

Query: 10  LQRELETKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLRDDANVFKLIGPVL 69
           +Q++L+ +     +LQKD++K+   R+K   QL EN +V +EL LL     VFKL+GPVL
Sbjct: 5   IQKKLQGEVEKYQQLQKDLSKSMSGRQKLEAQLTENNIVKEELALLDGSNVVFKLLGPVL 64

Query: 70  VKQDLAEANANVRKRIDYISAELKRLDSALQDLEEKQNSKRDAILKLQQRSQSLQAGKA 129
           VKQ+L EA A V KR+DYI+AE+KR +S L+DLE +   +R+ + +LQQ  Q  QA KA
Sbjct: 65  VKQELGEARATVGKRLDYITAEIKRYESQLRDLERQSEQQRETLAQLQQEFQRAQAAKA 123

[Close]
BLAST of Cp4.1LG09g07810 vs. Swiss-Prot
Match: PFD6_DROME (Probable prefoldin subunit 6 OS=Drosophila melanogaster GN=CG7770 PE=2 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 6.8e-15
Identity = 52/119 (43.70%), Postives = 74/119 (62.18%), Query Frame = 1 

Query: 3   STSVLRELQRELETKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLRDDANVF 62
           S ++ +++Q E+E+  N    LQK   K  + R     QL EN+ VL EL+LL  D  V+
Sbjct: 5   SAALYKKMQAEIESYQN----LQKSCLKMVKQRAVLESQLNENKCVLDELNLLGPDNKVY 64

Query: 63  KLIGPVLVKQDLAEANANVRKRIDYISAELKRLDSALQDLEEKQNSKRDAILKLQQRSQ 122
           KL GPVLVKQ+L E+  NV KRI+YIS ELK    AL+++E+     R+++ K QQ+ Q
Sbjct: 65  KLFGPVLVKQELEESRQNVGKRIEYISKELKSSTDALENMEKDMLKHRESVAKYQQQCQ 119

[Close]
BLAST of Cp4.1LG09g07810 vs. TrEMBL
Match: A0A059C611_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E02397 PE=4 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 5.7e-53
Identity = 117/130 (90.00%), Postives = 124/130 (95.38%), Query Frame = 1 

Query: 1   MSSTSVLRELQRELETKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLRDDAN 60
           MS++S LR+LQR+LE KANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLL +DAN
Sbjct: 1   MSTSSALRDLQRDLENKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLNEDAN 60

Query: 61  VFKLIGPVLVKQDLAEANANVRKRIDYISAELKRLDSALQDLEEKQNSKRDAILKLQQRS 120
           V+KLIGPVLVKQDLAEANANVRKRIDYISAELKRLD+ LQDLEEKQNSKRD ILKLQQR 
Sbjct: 61  VYKLIGPVLVKQDLAEANANVRKRIDYISAELKRLDATLQDLEEKQNSKRDMILKLQQRI 120

Query: 121 QSLQAGKAKA 131
           QSLQAGKAKA
Sbjct: 121 QSLQAGKAKA 130

[Close]
BLAST of Cp4.1LG09g07810 vs. TrEMBL
Match: F6HLR2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0003g03260 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 6.3e-52
Identity = 113/129 (87.60%), Postives = 124/129 (96.12%), Query Frame = 1 

Query: 2   SSTSVLRELQRELETKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLRDDANV 61
           SS++ +RELQRELETKANDLSKLQKDI+KNHQVRKKYTIQLGENELVLKELDLLR+DANV
Sbjct: 5   SSSAAMRELQRELETKANDLSKLQKDISKNHQVRKKYTIQLGENELVLKELDLLREDANV 64

Query: 62  FKLIGPVLVKQDLAEANANVRKRIDYISAELKRLDSALQDLEEKQNSKRDAILKLQQRSQ 121
           FKLIGPVLVKQDLAEANANVRKRIDYISAELKRLD+ LQDLEEKQNSK++A+ KLQQ+ Q
Sbjct: 65  FKLIGPVLVKQDLAEANANVRKRIDYISAELKRLDATLQDLEEKQNSKKEAVFKLQQKIQ 124

Query: 122 SLQAGKAKA 131
           +LQ GKAKA
Sbjct: 125 ALQPGKAKA 133

[Close]
BLAST of Cp4.1LG09g07810 vs. TrEMBL
Match: M5X431_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012619mg PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 1.8e-51
Identity = 113/130 (86.92%), Postives = 124/130 (95.38%), Query Frame = 1 

Query: 1   MSSTSVLRELQRELETKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLRDDAN 60
           M+S+S LRELQRELE KANDLSK+QKDI+KNHQVRKKYTIQLGENELVLKELDLL +DAN
Sbjct: 1   MASSSALRELQRELEAKANDLSKIQKDISKNHQVRKKYTIQLGENELVLKELDLLSEDAN 60

Query: 61  VFKLIGPVLVKQDLAEANANVRKRIDYISAELKRLDSALQDLEEKQNSKRDAILKLQQRS 120
           VFKLIGPVLVKQDLAEA ANVRKRI+YISAELKRLD+ LQDLEEKQNSK++ +LKLQQR+
Sbjct: 61  VFKLIGPVLVKQDLAEARANVRKRIEYISAELKRLDATLQDLEEKQNSKKETMLKLQQRA 120

Query: 121 QSLQAGKAKA 131
           QSLQAGKAKA
Sbjct: 121 QSLQAGKAKA 130

[Close]
BLAST of Cp4.1LG09g07810 vs. TrEMBL
Match: A0A0D2UM46_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G043400 PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 4.1e-51
Identity = 113/129 (87.60%), Postives = 125/129 (96.90%), Query Frame = 1 

Query: 2   SSTSVLRELQRELETKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLRDDANV 61
           SS++ LR+LQ +LE KANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLL++DANV
Sbjct: 3   SSSTALRDLQSDLENKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLKEDANV 62

Query: 62  FKLIGPVLVKQDLAEANANVRKRIDYISAELKRLDSALQDLEEKQNSKRDAILKLQQRSQ 121
           +KLIGPVLVKQDLAEANANVRKRI+YISAELKRLDS+LQDLEEKQ+SKR+AILK+QQR Q
Sbjct: 63  YKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSSLQDLEEKQHSKREAILKVQQRIQ 122

Query: 122 SLQAGKAKA 131
           SLQAGKAKA
Sbjct: 123 SLQAGKAKA 131

[Close]
BLAST of Cp4.1LG09g07810 vs. TrEMBL
Match: M5X2X5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013298mg PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 4.1e-51
Identity = 112/130 (86.15%), Postives = 124/130 (95.38%), Query Frame = 1 

Query: 1   MSSTSVLRELQRELETKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLRDDAN 60
           M+S+S LRELQRELE KANDLSK+QKDI+KNHQVRKKYTIQLGENELVLKELDLL +DAN
Sbjct: 1   MASSSALRELQRELEAKANDLSKIQKDISKNHQVRKKYTIQLGENELVLKELDLLSEDAN 60

Query: 61  VFKLIGPVLVKQDLAEANANVRKRIDYISAELKRLDSALQDLEEKQNSKRDAILKLQQRS 120
           VFKLIGPVLVKQDLAEA ANVRKRI+YISAELKRLD+ LQDL+EKQNSK++ +LKLQQR+
Sbjct: 61  VFKLIGPVLVKQDLAEARANVRKRIEYISAELKRLDTTLQDLDEKQNSKKETMLKLQQRA 120

Query: 121 QSLQAGKAKA 131
           QSLQAGKAKA
Sbjct: 121 QSLQAGKAKA 130

[Close]
BLAST of Cp4.1LG09g07810 vs. TAIR10
Match: AT1G29990.1 (AT1G29990.1 prefoldin 6)

HSP 1 Score: 198.7 bits (504), Expect = 2.1e-51
Identity = 104/128 (81.25%), Postives = 120/128 (93.75%), Query Frame = 1 

Query: 3   STSVLRELQRELETKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLRDDANVF 62
           S+S +R+LQR+LE KANDL K+QKDI KNHQ+RKKYTIQLGENELVLKELDLL +DANV+
Sbjct: 2   SSSTVRDLQRDLENKANDLGKIQKDIGKNHQLRKKYTIQLGENELVLKELDLLEEDANVY 61

Query: 63  KLIGPVLVKQDLAEANANVRKRIDYISAELKRLDSALQDLEEKQNSKRDAILKLQQRSQS 122
           KLIGPVLVKQDLAEANANVRKRI+YISAELKRLD+ LQD+EEKQN+KR+ I+KLQQR Q+
Sbjct: 62  KLIGPVLVKQDLAEANANVRKRIEYISAELKRLDAILQDMEEKQNNKRETIMKLQQRLQT 121

Query: 123 LQAGKAKA 131
           +QAGKAKA
Sbjct: 122 IQAGKAKA 129

[Close]
BLAST of Cp4.1LG09g07810 vs. NCBI nr
Match: gi|659068358|ref|XP_008444032.1| (PREDICTED: prefoldin subunit 6 [Cucumis melo])

HSP 1 Score: 221.1 bits (562), Expect = 1.1e-54
Identity = 121/130 (93.08%), Postives = 125/130 (96.15%), Query Frame = 1 

Query: 1   MSSTSVLRELQRELETKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLRDDAN 60
           MSSTS LRELQRELE KANDLSKLQKDIAKNHQVRKKYT+QLGENELVLKELDLL+DD N
Sbjct: 1   MSSTSALRELQRELEAKANDLSKLQKDIAKNHQVRKKYTVQLGENELVLKELDLLQDDTN 60

Query: 61  VFKLIGPVLVKQDLAEANANVRKRIDYISAELKRLDSALQDLEEKQNSKRDAILKLQQRS 120
           V+KLIGPVLVKQDLAEANANVRKRI+YISAELKRLDSALQDLEEKQNS RDAILKLQQR 
Sbjct: 61  VYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSALQDLEEKQNSNRDAILKLQQRI 120

Query: 121 QSLQAGKAKA 131
           QSLQAGKAKA
Sbjct: 121 QSLQAGKAKA 130

[Close]
BLAST of Cp4.1LG09g07810 vs. NCBI nr
Match: gi|702344701|ref|XP_010056888.1| (PREDICTED: prefoldin subunit 6 [Eucalyptus grandis])

HSP 1 Score: 214.9 bits (546), Expect = 8.2e-53
Identity = 117/130 (90.00%), Postives = 124/130 (95.38%), Query Frame = 1 

Query: 1   MSSTSVLRELQRELETKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLRDDAN 60
           MS++S LR+LQR+LE KANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLL +DAN
Sbjct: 1   MSTSSALRDLQRDLENKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLNEDAN 60

Query: 61  VFKLIGPVLVKQDLAEANANVRKRIDYISAELKRLDSALQDLEEKQNSKRDAILKLQQRS 120
           V+KLIGPVLVKQDLAEANANVRKRIDYISAELKRLD+ LQDLEEKQNSKRD ILKLQQR 
Sbjct: 61  VYKLIGPVLVKQDLAEANANVRKRIDYISAELKRLDATLQDLEEKQNSKRDMILKLQQRI 120

Query: 121 QSLQAGKAKA 131
           QSLQAGKAKA
Sbjct: 121 QSLQAGKAKA 130

[Close]
BLAST of Cp4.1LG09g07810 vs. NCBI nr
Match: gi|449459354|ref|XP_004147411.1| (PREDICTED: prefoldin subunit 6 [Cucumis sativus])

HSP 1 Score: 213.8 bits (543), Expect = 1.8e-52
Identity = 116/130 (89.23%), Postives = 123/130 (94.62%), Query Frame = 1 

Query: 1   MSSTSVLRELQRELETKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLRDDAN 60
           MSS++ LRE+QRELE KANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLL+DD N
Sbjct: 1   MSSSTALREVQRELEAKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDDTN 60

Query: 61  VFKLIGPVLVKQDLAEANANVRKRIDYISAELKRLDSALQDLEEKQNSKRDAILKLQQRS 120
           V+KLIGPVLVKQDLAEANANVRKRI+YISAELKRLDS LQDLEEKQN KRD +LKLQQR 
Sbjct: 61  VYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSILQDLEEKQNRKRDVVLKLQQRI 120

Query: 121 QSLQAGKAKA 131
           QSLQAGKAKA
Sbjct: 121 QSLQAGKAKA 130

[Close]
BLAST of Cp4.1LG09g07810 vs. NCBI nr
Match: gi|720093341|ref|XP_010246020.1| (PREDICTED: prefoldin subunit 6 [Nelumbo nucifera])

HSP 1 Score: 213.0 bits (541), Expect = 3.1e-52
Identity = 115/130 (88.46%), Postives = 123/130 (94.62%), Query Frame = 1 

Query: 1   MSSTSVLRELQRELETKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLRDDAN 60
           MSS+S LRELQ ELETKANDLSKLQK+IAKNHQVRKKYT+QLGENELVLKELDLL +DAN
Sbjct: 1   MSSSSALRELQHELETKANDLSKLQKEIAKNHQVRKKYTVQLGENELVLKELDLLNEDAN 60

Query: 61  VFKLIGPVLVKQDLAEANANVRKRIDYISAELKRLDSALQDLEEKQNSKRDAILKLQQRS 120
           VFKLIGPVLVKQDLAEA ANVRKRIDYISAELKRLD  LQDLEEKQNSK+DA+LK+QQR 
Sbjct: 61  VFKLIGPVLVKQDLAEAKANVRKRIDYISAELKRLDGTLQDLEEKQNSKKDAVLKVQQRI 120

Query: 121 QSLQAGKAKA 131
           Q+LQAGKAKA
Sbjct: 121 QALQAGKAKA 130

[Close]
BLAST of Cp4.1LG09g07810 vs. NCBI nr
Match: gi|802596172|ref|XP_012072099.1| (PREDICTED: prefoldin subunit 6 [Jatropha curcas])

HSP 1 Score: 211.5 bits (537), Expect = 9.0e-52
Identity = 113/130 (86.92%), Postives = 125/130 (96.15%), Query Frame = 1 

Query: 1   MSSTSVLRELQRELETKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLRDDAN 60
           M+S++ +RELQR+LE KANDLSK QKDIAKNHQVRKKYT+QLGENELVLKELDLL++DAN
Sbjct: 1   MASSTAIRELQRDLENKANDLSKHQKDIAKNHQVRKKYTVQLGENELVLKELDLLKEDAN 60

Query: 61  VFKLIGPVLVKQDLAEANANVRKRIDYISAELKRLDSALQDLEEKQNSKRDAILKLQQRS 120
           V+KLIGPVLVKQDLAEANANVRKRIDYISAELKRLD+ LQDLEEKQNSK+DAILKLQQR 
Sbjct: 61  VYKLIGPVLVKQDLAEANANVRKRIDYISAELKRLDATLQDLEEKQNSKKDAILKLQQRI 120

Query: 121 QSLQAGKAKA 131
           Q+LQAGKAKA
Sbjct: 121 QTLQAGKAKA 130

The following BLAST results are available for this feature:
BLAST of Cp4.1LG09g07810 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PFD6_BOVIN8.2e-2147.93Prefoldin subunit 6 OS=Bos taurus GN=PFDN6 PE=2 SV=1[more]
PFD6_HUMAN1.4e-2047.93Prefoldin subunit 6 OS=Homo sapiens GN=PFDN6 PE=1 SV=1[more]
PFD6_CANLF1.4e-2047.93Prefoldin subunit 6 OS=Canis lupus familiaris GN=PFDN6 PE=3 SV=1[more]
PFD6_MOUSE1.8e-2047.90Prefoldin subunit 6 OS=Mus musculus GN=Pfdn6 PE=1 SV=1[more]
PFD6_DROME6.8e-1543.70Probable prefoldin subunit 6 OS=Drosophila melanogaster GN=CG7770 PE=2 SV=1[more]
BLAST of Cp4.1LG09g07810 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A059C611_EUCGR5.7e-5390.00Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E02397 PE=4 SV=1[more]
F6HLR2_VITVI6.3e-5287.60Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0003g03260 PE=4 SV=... [more]
M5X431_PRUPE1.8e-5186.92Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012619mg PE=4 SV=1[more]
A0A0D2UM46_GOSRA4.1e-5187.60Uncharacterized protein OS=Gossypium raimondii GN=B456_011G043400 PE=4 SV=1[more]
M5X2X5_PRUPE4.1e-5186.15Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013298mg PE=4 SV=1[more]
BLAST of Cp4.1LG09g07810 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G29990.12.1e-5181.25 prefoldin 6[more]
BLAST of Cp4.1LG09g07810 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659068358|ref|XP_008444032.1|1.1e-5493.08PREDICTED: prefoldin subunit 6 [Cucumis melo][more]
gi|702344701|ref|XP_010056888.1|8.2e-5390.00PREDICTED: prefoldin subunit 6 [Eucalyptus grandis][more]
gi|449459354|ref|XP_004147411.1|1.8e-5289.23PREDICTED: prefoldin subunit 6 [Cucumis sativus][more]
gi|720093341|ref|XP_010246020.1|3.1e-5288.46PREDICTED: prefoldin subunit 6 [Nelumbo nucifera][more]
gi|802596172|ref|XP_012072099.1|9.0e-5286.92PREDICTED: prefoldin subunit 6 [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0051082unfolded protein binding
Vocabulary: Cellular Component
TermDefinition
GO:0016272prefoldin complex
Vocabulary: Biological Process
TermDefinition
GO:0006457protein folding
Vocabulary: INTERPRO
TermDefinition
IPR009053Prefoldin
IPR002777PFD_beta-like
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0043622 cortical microtubule organization
biological_process GO:0006094 gluconeogenesis
biological_process GO:0006096 glycolytic process
biological_process GO:0006457 protein folding
biological_process GO:0046686 response to cadmium ion
biological_process GO:0009651 response to salt stress
cellular_component GO:0005829 cytosol
cellular_component GO:0016272 prefoldin complex
molecular_function GO:0051082 unfolded protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG09g07810.1Cp4.1LG09g07810.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002777Prefoldin beta-likePFAMPF01920Prefoldin_2coord: 16..118
score: 8.5
IPR009053PrefoldinGENE3DG3DSA:1.10.287.370coord: 9..121
score: 4.6
IPR009053PrefoldinunknownSSF46579Prefoldincoord: 14..118
score: 1.96
NoneNo IPR availableunknownCoilCoilcoord: 85..119
score: -coord: 7..27
scor
NoneNo IPR availablePANTHERPTHR21431PREFOLDIN SUBUNIT 6coord: 1..128
score: 7.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG09g07810gCucsa.212390.2Cucumber (Gy14) v1cgycpeB0585
Cp4.1LG09g07810CmaCh13G005560Cucurbita maxima (Rimu)cmacpeB212
Cp4.1LG09g07810CmaCh18G004620Cucurbita maxima (Rimu)cmacpeB415
Cp4.1LG09g07810CmoCh18G004390Cucurbita moschata (Rifu)cmocpeB377
Cp4.1LG09g07810CmoCh13G005880Cucurbita moschata (Rifu)cmocpeB182
Cp4.1LG09g07810Cla019606Watermelon (97103) v1cpewmB024
Cp4.1LG09g07810Csa1G448940Cucumber (Chinese Long) v2cpecuB019
Cp4.1LG09g07810MELO3C002717Melon (DHL92) v3.5.1cpemeB026
Cp4.1LG09g07810ClCG03G007080Watermelon (Charleston Gray)cpewcgB035
Cp4.1LG09g07810CSPI01G21400Wild cucumber (PI 183967)cpecpiB016
Cp4.1LG09g07810Lsi02G008680Bottle gourd (USVL1VR-Ls)cpelsiB026
Cp4.1LG09g07810MELO3C002717.2Melon (DHL92) v3.6.1cpemedB031
Cp4.1LG09g07810CsaV3_1G032650Cucumber (Chinese Long) v3cpecucB0019
Cp4.1LG09g07810Bhi08G001720Wax gourdcpewgoB0039
Cp4.1LG09g07810CsGy1G021110Cucumber (Gy14) v2cgybcpeB006
Cp4.1LG09g07810Carg19924Silver-seed gourdcarcpeB1119
Cp4.1LG09g07810Carg14543Silver-seed gourdcarcpeB0211
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG09g07810Cp4.1LG20g05010Cucurbita pepo (Zucchini)cpecpeB048
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG09g07810Cucumber (Chinese Long) v2cpecuB051
Cp4.1LG09g07810Bottle gourd (USVL1VR-Ls)cpelsiB021
Cp4.1LG09g07810Watermelon (Charleston Gray)cpewcgB027
Cp4.1LG09g07810Watermelon (97103) v1cpewmB039
Cp4.1LG09g07810Watermelon (97103) v1cpewmB054
Cp4.1LG09g07810Melon (DHL92) v3.5.1cpemeB044
Cp4.1LG09g07810Cucumber (Gy14) v2cgybcpeB706
Cp4.1LG09g07810Melon (DHL92) v3.6.1cpemedB052
Cp4.1LG09g07810Silver-seed gourdcarcpeB0771
Cp4.1LG09g07810Silver-seed gourdcarcpeB1324
Cp4.1LG09g07810Cucumber (Chinese Long) v3cpecucB0054
Cp4.1LG09g07810Wax gourdcpewgoB0035
Cp4.1LG09g07810Cucurbita pepo (Zucchini)cpecpeB018
Cp4.1LG09g07810Cucurbita pepo (Zucchini)cpecpeB043
Cp4.1LG09g07810Cucumber (Gy14) v1cgycpeB0030
Cp4.1LG09g07810Cucurbita maxima (Rimu)cmacpeB653
Cp4.1LG09g07810Cucurbita maxima (Rimu)cmacpeB858
Cp4.1LG09g07810Cucurbita moschata (Rifu)cmocpeB603
Cp4.1LG09g07810Cucurbita moschata (Rifu)cmocpeB798
Cp4.1LG09g07810Wild cucumber (PI 183967)cpecpiB046