Cla019606 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla019606
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Prefoldin subunit 6 (AHRD V1 -* B6T5S0_MAIZE); contains Interpro domain(s) IPR002777 Prefoldin beta-like
Location	Chr3 : 7608940 .. 7609876 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTCTACAAGCGCTCTTCGAGAGCTACAGCGCGAGCTGGAGACGAAAGCCAACGATCTCAGCAAGCTACAGAAAGGCAAGACTCTAATCGATTATCGTTTCCTCCCTGTTGTTCATTCGATTAGCACGTTTTATCGAAACATCAATATTTCAATTCAAATACTGCGTCGACTGTGCTATCTGGATTCAATACTATCAATTTACTTTCACAAAAAGCCTAACATGGTGATGGATTTATCAGATATTGCGAAGAACCACCAAGTGAGGAAGAAGTACACTATTCAGCTGGGTGAGAACGAGCTCGTGCTTAAGGTTTTCTCACCCCTCTCACTTGTTTCCTTTACCTGTTTGCTTGTGCATGGTTCAGTAGCGAGGAGGGGAAGTACGATAAGAGAATTTTCTGACTCGTTTATTTCTGTCCGTGCAGAAGTTGCAAAAAATAGAATGAATTGTGTTAATATTCCCCTTTTCGGTTTCAATTTTGTACATTCCTGTGTTATAATGAATTATGATATGTAAATTATCATTAGGGGCAAATTGCGTCAAGGGGATTTTTTTCACTTGATTTGACATGTAGTTTAGATTATGGAAATTTCTTTACATTTATATAATCTGGTATACAATAAGAATTTGAAGCACTCTTATCGGTGGCCATTTTTCTCATTCATTGCTACTACGTGTGAACTTGTTTCTTGATCTGCTTCTTTAATTACCTATGCAGGAATTGGATCTGCTTAATGACGAATCAAATGTATATAAATTGATTGGTCCAGTGCTCGTGAAGCAAGATTTAGCAGAAGCAAATGCGAATGTGCGCAAGAGAATTGAATACATCTCTGCAGAATTGTATGTTTTTTCATTTGTGTTCCATACAGTCTCTTATCAAAAAAAGAAAAAAAAAAGTTTTCCATATAGTTTTTTAGCTCCTGGATAG

mRNA sequence

ATGAGTTCTACAAGCGCTCTTCGAGAGCTACAGCGCGAGCTGGAGACGAAAGCCAACGATCTCAGCAAGCTACAGAAAGGCAAGACTCTAATCGATTATCGTTTCCTCCCTGTTGTTCATTCGATTAGCACGTTTTATCGAAACATCAATATTTCAATTCAAATACTGCGTCGACTGTGCTATCTGGATTCAATACTATCAATTTACTTTCACAAAAAGCCTAACATGGTGATGGATTTATCAGATATTGCGAAGAACCACCAAGTGAGGAAGAAGTACACTATTCAGCTGGGTGAGAACGAGCTCGTGCTTAAGGAATTGGATCTGCTTAATGACGAATCAAATGTATATAAATTGATTGGTCCAGTGCTCGTGAAGCAAGATTTAGCAGAAGCAAATGCGAATGTGCGCAAGAGAATTGAATACATCTCTGCAGAATTGTATGTTTTTTCATTTGTGTTCCATACAGTCTCTTATCAAAAAAAGAAAAAAAAAAGTTTTCCATATAGTTTTTTAGCTCCTGGATAG

Coding sequence (CDS)

ATGAGTTCTACAAGCGCTCTTCGAGAGCTACAGCGCGAGCTGGAGACGAAAGCCAACGATCTCAGCAAGCTACAGAAAGGCAAGACTCTAATCGATTATCGTTTCCTCCCTGTTGTTCATTCGATTAGCACGTTTTATCGAAACATCAATATTTCAATTCAAATACTGCGTCGACTGTGCTATCTGGATTCAATACTATCAATTTACTTTCACAAAAAGCCTAACATGGTGATGGATTTATCAGATATTGCGAAGAACCACCAAGTGAGGAAGAAGTACACTATTCAGCTGGGTGAGAACGAGCTCGTGCTTAAGGAATTGGATCTGCTTAATGACGAATCAAATGTATATAAATTGATTGGTCCAGTGCTCGTGAAGCAAGATTTAGCAGAAGCAAATGCGAATGTGCGCAAGAGAATTGAATACATCTCTGCAGAATTGTATGTTTTTTCATTTGTGTTCCATACAGTCTCTTATCAAAAAAAGAAAAAAAAAAGTTTTCCATATAGTTTTTTAGCTCCTGGATAG

Protein sequence

MSSTSALRELQRELETKANDLSKLQKGKTLIDYRFLPVVHSISTFYRNINISIQILRRLCYLDSILSIYFHKKPNMVMDLSDIAKNHQVRKKYTIQLGENELVLKELDLLNDESNVYKLIGPVLVKQDLAEANANVRKRIEYISAELYVFSFVFHTVSYQKKKKKSFPYSFLAPG

Homology

[Close]

BLAST of Cla019606 vs. Swiss-Prot
Match: PFD6_BOVIN (Prefoldin subunit 6 OS=Bos taurus GN=PFDN6 PE=2 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 4.7e-11
Identity = 35/84 (41.67%), Postives = 54/84 (64.29%), Query Frame = 1


Query: 82  DIAKNHQVRKKYTIQLGENELVLKELDLLNDESNVYKLIGPVLVKQDLAEANANVRKRIE 141
           D++K+   R+K   QL EN +V +EL LL+  + V+KL+GPVLVKQ+L EA A V KR++
Sbjct: 22  DLSKSMSGRQKLEAQLTENNIVKEELALLDGSNVVFKLLGPVLVKQELGEARATVGKRLD 81

Query: 142 YISAELYVFSFVFHTVSYQKKKKK 166
           YI+AE+  +      +  Q ++++
Sbjct: 82  YITAEIKRYESQLRDLEQQSEQQR 105

[Close]

BLAST of Cla019606 vs. Swiss-Prot
Match: PFD6_CANLF (Prefoldin subunit 6 OS=Canis lupus familiaris GN=PFDN6 PE=3 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 6.1e-11
Identity = 35/84 (41.67%), Postives = 54/84 (64.29%), Query Frame = 1


Query: 82  DIAKNHQVRKKYTIQLGENELVLKELDLLNDESNVYKLIGPVLVKQDLAEANANVRKRIE 141
           D++K+   R+K   QL EN +V +EL LL+  + V+KL+GPVLVKQ+L EA A V KR++
Sbjct: 22  DLSKSMSGRQKLEAQLTENNIVKEELALLDGSNVVFKLLGPVLVKQELGEARATVGKRLD 81

Query: 142 YISAELYVFSFVFHTVSYQKKKKK 166
           YI+AE+  +      +  Q ++++
Sbjct: 82  YITAEIKRYESQLRDLERQSEQQR 105

[Close]

BLAST of Cla019606 vs. Swiss-Prot
Match: PFD6_MOUSE (Prefoldin subunit 6 OS=Mus musculus GN=Pfdn6 PE=1 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 6.1e-11
Identity = 35/84 (41.67%), Postives = 54/84 (64.29%), Query Frame = 1


Query: 82  DIAKNHQVRKKYTIQLGENELVLKELDLLNDESNVYKLIGPVLVKQDLAEANANVRKRIE 141
           D++K+   R+K   QL EN +V +EL LL+  + V+KL+GPVLVKQ+L EA A V KR++
Sbjct: 22  DLSKSMSGRQKLEAQLTENNIVKEELALLDGSNVVFKLLGPVLVKQELGEARATVGKRLD 81

Query: 142 YISAELYVFSFVFHTVSYQKKKKK 166
           YI+AE+  +      +  Q ++++
Sbjct: 82  YITAEIKRYESQLRDLERQSEQQR 105

[Close]

BLAST of Cla019606 vs. Swiss-Prot
Match: PFD6_HUMAN (Prefoldin subunit 6 OS=Homo sapiens GN=PFDN6 PE=1 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 6.1e-11
Identity = 35/84 (41.67%), Postives = 54/84 (64.29%), Query Frame = 1


Query: 82  DIAKNHQVRKKYTIQLGENELVLKELDLLNDESNVYKLIGPVLVKQDLAEANANVRKRIE 141
           D++K+   R+K   QL EN +V +EL LL+  + V+KL+GPVLVKQ+L EA A V KR++
Sbjct: 22  DLSKSMSGRQKLEAQLTENNIVKEELALLDGSNVVFKLLGPVLVKQELGEARATVGKRLD 81

Query: 142 YISAELYVFSFVFHTVSYQKKKKK 166
           YI+AE+  +      +  Q ++++
Sbjct: 82  YITAEIKRYESQLRDLERQSEQQR 105

[Close]

BLAST of Cla019606 vs. Swiss-Prot
Match: PFD6_DROME (Probable prefoldin subunit 6 OS=Drosophila melanogaster GN=CG7770 PE=2 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 2.3e-10
Identity = 34/52 (65.38%), Postives = 38/52 (73.08%), Query Frame = 1


Query: 96  QLGENELVLKELDLLNDESNVYKLIGPVLVKQDLAEANANVRKRIEYISAEL 148
           QL EN+ VL EL+LL  ++ VYKL GPVLVKQ+L E+  NV KRIEYIS EL
Sbjct: 39  QLNENKCVLDELNLLGPDNKVYKLFGPVLVKQELEESRQNVGKRIEYISKEL 90

[Close]

BLAST of Cla019606 vs. TrEMBL
Match: A0A067KPA0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04610 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 5.9e-37
Identity = 94/170 (55.29%), Postives = 114/170 (67.06%), Query Frame = 1


Query: 1   MSSTSALRELQRELETKANDLSKLQKGKTLIDYRFLPVVHSISTFYRNINISIQILRRLC 60
           M+S++A+RELQR+LE KANDLSK QKGK L+ +   P  +SI T                
Sbjct: 1   MASSTAIRELQRDLENKANDLSKHQKGKLLVSFFTEP--YSICT---------------- 60

Query: 61  YLDSILSIYFHKKPNMVMD-LSDIAKNHQVRKKYTIQLGENELVLKELDLLNDESNVYKL 120
               +L I+  K P M    ++DIAKNHQVRKKYT+QLGENELVLKELDLL +++NVYKL
Sbjct: 61  ---QLLIIFKDKNPKMTQQSMADIAKNHQVRKKYTVQLGENELVLKELDLLKEDANVYKL 120

Query: 121 IGPVLVKQDLAEANANVRKRIEYISAELYVFSFVFHTVSYQKKKKKSFPY 170
           IGPVLVKQDLAEANANVRKRI+YISAEL         +  ++  KK   Y
Sbjct: 121 IGPVLVKQDLAEANANVRKRIDYISAELKRLDATLQDLEEKQNSKKDALY 149

[Close]

BLAST of Cla019606 vs. TrEMBL
Match: A0A0A0LUZ0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G448940 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.1e-30
Identity = 73/80 (91.25%), Postives = 75/80 (93.75%), Query Frame = 1


Query: 78  MDLSDIAKNHQVRKKYTIQLGENELVLKELDLLNDESNVYKLIGPVLVKQDLAEANANVR 137
           MDLSDIAKNHQVRKKYTIQLGENELVLKELDLL D++NVYKLIGPVLVKQDLAEANANVR
Sbjct: 1   MDLSDIAKNHQVRKKYTIQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVR 60

Query: 138 KRIEYISAELYVFSFVFHTV 158
           KRIEYISAEL V S VFH V
Sbjct: 61  KRIEYISAELCVSSSVFHIV 80

[Close]

BLAST of Cla019606 vs. TrEMBL
Match: A0A0D3D5V3_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 5.5e-27
Identity = 64/69 (92.75%), Postives = 68/69 (98.55%), Query Frame = 1


Query: 82  DIAKNHQVRKKYTIQLGENELVLKELDLLNDESNVYKLIGPVLVKQDLAEANANVRKRIE 141
           +IAKNHQ+RKKYTIQLGENELVLKELDLL D++NVYKLIGPVLVKQDLAEANANVRKRIE
Sbjct: 28  EIAKNHQLRKKYTIQLGENELVLKELDLLEDDANVYKLIGPVLVKQDLAEANANVRKRIE 87

Query: 142 YISAELYVF 151
           YISAELYVF
Sbjct: 88  YISAELYVF 96

[Close]

BLAST of Cla019606 vs. TrEMBL
Match: A0A0D3D5V3_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1)

HSP 1 Score: 40.8 bits (94), Expect = 2.0e+00
Identity = 38/121 (31.40%), Postives = 60/121 (49.59%), Query Frame = 1


Query: 2   SSTSALRELQRELETKANDLSKLQKGKTLIDYRFLPVVHSISTFYR-NINISIQILRRLC 61
           SS+ ALR++QR+LE KANDL+K+QK         +   H +   Y   +  +  +L+ L 
Sbjct: 3   SSSMALRDMQRDLEAKANDLAKIQKE--------IAKNHQLRKKYTIQLGENELVLKELD 62

Query: 62  YLDSILSIYFHKKPNMVMDLSDIAK-NHQVRKKYTIQLGENELVLKELDLLNDESNVYKL 121
            L+   ++Y  K    V+   D+A+ N  VRK+      E  +    L LL  E+ V K 
Sbjct: 63  LLEDDANVY--KLIGPVLVKQDLAEANANVRKRIEYISAELYVFFLLLLLLGVEATVAKF 113

HSP 2 Score: 128.3 bits (321), Expect = 9.4e-27
Identity = 67/78 (85.90%), Postives = 71/78 (91.03%), Query Frame = 1


Query: 75  NMVMDLS----DIAKNHQVRKKYTIQLGENELVLKELDLLNDESNVYKLIGPVLVKQDLA 134
           N   DLS    DIAKNHQVRKKYTIQLGENELVLKELDLLN+++NVYKLIGPVLVKQDLA
Sbjct: 16  NKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLNEDANVYKLIGPVLVKQDLA 75

Query: 135 EANANVRKRIEYISAELY 149
           EANANVRKRI+YISAELY
Sbjct: 76  EANANVRKRIDYISAELY 93

[Close]

BLAST of Cla019606 vs. TrEMBL
Match: A0A059C5P8_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E02397 PE=4 SV=1)

HSP 1 Score: 44.3 bits (103), Expect = 1.8e-01
Identity = 21/26 (80.77%), Postives = 25/26 (96.15%), Query Frame = 1


Query: 1  MSSTSALRELQRELETKANDLSKLQK 27
          MS++SALR+LQR+LE KANDLSKLQK
Sbjct: 1  MSTSSALRDLQRDLENKANDLSKLQK 26

HSP 2 Score: 126.7 bits (317), Expect = 2.7e-26
Identity = 64/72 (88.89%), Postives = 68/72 (94.44%), Query Frame = 1


Query: 82  DIAKNHQVRKKYTIQLGENELVLKELDLLNDESNVYKLIGPVLVKQDLAEANANVRKRIE 141
           DI KNHQVRKKYTIQLGENELVLKEL LLN+ +NVYKLIGPVLVKQDLAEANANVRKRIE
Sbjct: 27  DIGKNHQVRKKYTIQLGENELVLKELGLLNEGANVYKLIGPVLVKQDLAEANANVRKRIE 86

Query: 142 YISAELYVFSFV 154
           YISAELYV S++
Sbjct: 87  YISAELYVSSYL 98

[Close]

BLAST of Cla019606 vs. NCBI nr
Match: gi|643730535|gb|KDP37967.1| (hypothetical protein JCGZ_04610 [Jatropha curcas])

HSP 1 Score: 162.2 bits (409), Expect = 8.5e-37
Identity = 94/170 (55.29%), Postives = 114/170 (67.06%), Query Frame = 1


Query: 1   MSSTSALRELQRELETKANDLSKLQKGKTLIDYRFLPVVHSISTFYRNINISIQILRRLC 60
           M+S++A+RELQR+LE KANDLSK QKGK L+ +   P  +SI T                
Sbjct: 1   MASSTAIRELQRDLENKANDLSKHQKGKLLVSFFTEP--YSICT---------------- 60

Query: 61  YLDSILSIYFHKKPNMVMD-LSDIAKNHQVRKKYTIQLGENELVLKELDLLNDESNVYKL 120
               +L I+  K P M    ++DIAKNHQVRKKYT+QLGENELVLKELDLL +++NVYKL
Sbjct: 61  ---QLLIIFKDKNPKMTQQSMADIAKNHQVRKKYTVQLGENELVLKELDLLKEDANVYKL 120

Query: 121 IGPVLVKQDLAEANANVRKRIEYISAELYVFSFVFHTVSYQKKKKKSFPY 170
           IGPVLVKQDLAEANANVRKRI+YISAEL         +  ++  KK   Y
Sbjct: 121 IGPVLVKQDLAEANANVRKRIDYISAELKRLDATLQDLEEKQNSKKDALY 149

[Close]

BLAST of Cla019606 vs. NCBI nr
Match: gi|700210467|gb|KGN65563.1| (hypothetical protein Csa_1G448940 [Cucumis sativus])

HSP 1 Score: 141.4 bits (355), Expect = 1.5e-30
Identity = 73/80 (91.25%), Postives = 75/80 (93.75%), Query Frame = 1


Query: 78  MDLSDIAKNHQVRKKYTIQLGENELVLKELDLLNDESNVYKLIGPVLVKQDLAEANANVR 137
           MDLSDIAKNHQVRKKYTIQLGENELVLKELDLL D++NVYKLIGPVLVKQDLAEANANVR
Sbjct: 1   MDLSDIAKNHQVRKKYTIQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVR 60

Query: 138 KRIEYISAELYVFSFVFHTV 158
           KRIEYISAEL V S VFH V
Sbjct: 61  KRIEYISAELCVSSSVFHIV 80

[Close]

BLAST of Cla019606 vs. NCBI nr
Match: gi|629108652|gb|KCW73798.1| (hypothetical protein EUGRSUZ_E02397 [Eucalyptus grandis])

HSP 1 Score: 128.3 bits (321), Expect = 1.4e-26
Identity = 67/78 (85.90%), Postives = 71/78 (91.03%), Query Frame = 1


Query: 75  NMVMDLS----DIAKNHQVRKKYTIQLGENELVLKELDLLNDESNVYKLIGPVLVKQDLA 134
           N   DLS    DIAKNHQVRKKYTIQLGENELVLKELDLLN+++NVYKLIGPVLVKQDLA
Sbjct: 16  NKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLNEDANVYKLIGPVLVKQDLA 75

Query: 135 EANANVRKRIEYISAELY 149
           EANANVRKRI+YISAELY
Sbjct: 76  EANANVRKRIDYISAELY 93

[Close]

BLAST of Cla019606 vs. NCBI nr
Match: gi|629108652|gb|KCW73798.1| (hypothetical protein EUGRSUZ_E02397 [Eucalyptus grandis])

HSP 1 Score: 44.3 bits (103), Expect = 2.6e-01
Identity = 21/26 (80.77%), Postives = 25/26 (96.15%), Query Frame = 1


Query: 1  MSSTSALRELQRELETKANDLSKLQK 27
          MS++SALR+LQR+LE KANDLSKLQK
Sbjct: 1  MSTSSALRDLQRDLENKANDLSKLQK 26

HSP 2 Score: 127.1 bits (318), Expect = 3.0e-26
Identity = 64/84 (76.19%), Postives = 72/84 (85.71%), Query Frame = 1


Query: 82  DIAKNHQVRKKYTIQLGENELVLKELDLLNDESNVYKLIGPVLVKQDLAEANANVRKRIE 141
           DIAKNHQVRKKYTIQLGENELVLKELDLL D++NVYKLIGPVLVKQDLAEANANVRKRIE
Sbjct: 27  DIAKNHQVRKKYTIQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIE 86

Query: 142 YISAELYVFSFVFHTVSYQKKKKK 166
           YISAEL     +   +  ++ +K+
Sbjct: 87  YISAELKRLDSILQDLEEKQNRKR 110

[Close]

BLAST of Cla019606 vs. NCBI nr
Match: gi|449459354|ref|XP_004147411.1| (PREDICTED: prefoldin subunit 6 [Cucumis sativus])

HSP 1 Score: 47.0 bits (110), Expect = 4.0e-02
Identity = 38/111 (34.23%), Postives = 61/111 (54.95%), Query Frame = 1


Query: 1   MSSTSALRELQRELETKANDLSKLQKGKTLIDYRFLPVVHSISTFYR-NINISIQILRRL 60
           MSS++ALRE+QRELE KANDLSKLQK         +   H +   Y   +  +  +L+ L
Sbjct: 1   MSSSTALREVQRELEAKANDLSKLQKD--------IAKNHQVRKKYTIQLGENELVLKEL 60

Query: 61  CYLDSILSIYFHKKPNMV-MDLSDIAKNHQVRKKY-TIQLGENELVLKELD 109
             L    ++Y    P +V  DL++   N + R +Y + +L   + +L++L+
Sbjct: 61  DLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSILQDLE 103

HSP 2 Score: 127.1 bits (318), Expect = 3.0e-26
Identity = 65/84 (77.38%), Postives = 71/84 (84.52%), Query Frame = 1


Query: 82  DIAKNHQVRKKYTIQLGENELVLKELDLLNDESNVYKLIGPVLVKQDLAEANANVRKRIE 141
           DIAKNHQVRKKYTIQLGENELVLKELDLLN+E+NVYKLIGPVLVKQDLAEANANVRKRI+
Sbjct: 24  DIAKNHQVRKKYTIQLGENELVLKELDLLNEEANVYKLIGPVLVKQDLAEANANVRKRID 83

Query: 142 YISAELYVFSFVFHTVSYQKKKKK 166
           YISAEL         +  ++  KK
Sbjct: 84  YISAELKRLDATLQDLEEKQNSKK 107

The following BLAST results are available for this feature:

BLAST of Cla019606 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PFD6_BOVIN	4.7e-11	41.67	Prefoldin subunit 6 OS=Bos taurus GN=PFDN6 PE=2 SV=1	[more]
PFD6_CANLF	6.1e-11	41.67	Prefoldin subunit 6 OS=Canis lupus familiaris GN=PFDN6 PE=3 SV=1	[more]
PFD6_MOUSE	6.1e-11	41.67	Prefoldin subunit 6 OS=Mus musculus GN=Pfdn6 PE=1 SV=1	[more]
PFD6_HUMAN	6.1e-11	41.67	Prefoldin subunit 6 OS=Homo sapiens GN=PFDN6 PE=1 SV=1	[more]
PFD6_DROME	2.3e-10	65.38	Probable prefoldin subunit 6 OS=Drosophila melanogaster GN=CG7770 PE=2 SV=1	[more]

BLAST of Cla019606 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A067KPA0_JATCU	5.9e-37	55.29	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04610 PE=4 SV=1	[more]
A0A0A0LUZ0_CUCSA	1.1e-30	91.25	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G448940 PE=4 SV=1	[more]
A0A0D3D5V3_BRAOL	5.5e-27	92.75	Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1	[more]
A0A0D3D5V3_BRAOL	2.0e+00	31.40	Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1	[more]
A0A059C5P8_EUCGR	1.8e-01	80.77	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E02397 PE=4 SV=1	[more]

BLAST of Cla019606 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|643730535\|gb\|KDP37967.1\|	8.5e-37	55.29	hypothetical protein JCGZ_04610 [Jatropha curcas]	[more]
gi\|700210467\|gb\|KGN65563.1\|	1.5e-30	91.25	hypothetical protein Csa_1G448940 [Cucumis sativus]	[more]
gi\|629108652\|gb\|KCW73798.1\|	1.4e-26	85.90	hypothetical protein EUGRSUZ_E02397 [Eucalyptus grandis]	[more]
gi\|629108652\|gb\|KCW73798.1\|	2.6e-01	80.77	hypothetical protein EUGRSUZ_E02397 [Eucalyptus grandis]	[more]
gi\|449459354\|ref\|XP_004147411.1\|	4.0e-02	34.23	PREDICTED: prefoldin subunit 6 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002777	PFD_beta-like
IPR009053	Prefoldin

Vocabulary: **Biological Process**
Term	Definition
GO:0006457	protein folding

Vocabulary: **Cellular Component**
Term	Definition
GO:0016272	prefoldin complex

Vocabulary: **Molecular Function**
Term	Definition
GO:0051082	unfolded protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043622	cortical microtubule organization
biological_process	GO:0006094	gluconeogenesis
biological_process	GO:0006096	glycolytic process
biological_process	GO:0006457	protein folding
biological_process	GO:0046686	response to cadmium ion
biological_process	GO:0009651	response to salt stress
biological_process	GO:0051131	chaperone-mediated protein complex assembly
cellular_component	GO:0005829	cytosol
cellular_component	GO:0016272	prefoldin complex
molecular_function	GO:0051082	unfolded protein binding
molecular_function	GO:0051087	chaperone binding

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
WMU08774	watermelon unigene v2 vs TrEMBL	transcribed_cluster
WMU11730	watermelon EST collection version 2.0	transcribed_cluster
WMU28315	watermelon unigene v2 vs TrEMBL	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla019606	Cla019606.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
WMU28315	WMU28315	transcribed_cluster
WMU11730	WMU11730	transcribed_cluster
WMU08774	WMU08774	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002777	Prefoldin beta-like	PFAM	PF01920	Prefoldin_2	coord: 82..147 score: 9.3
IPR009053	Prefoldin	GENE3D	G3DSA:1.10.287.370		coord: 82..148 score: 8.1
IPR009053	Prefoldin	unknown	SSF46579	Prefoldin	coord: 82..147 score: 1.78
None	No IPR available	unknown	Coil	Coil	coord: 7..27 scor
None	No IPR available	PANTHER	PTHR21431	PREFOLDIN SUBUNIT 6	coord: 82..147 score: 5.1
None	No IPR available	PANTHER	PTHR21431:SF0	PREFOLDIN SUBUNIT 6	coord: 82..147 score: 5.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla019606	Cla97C03G058310	Watermelon (97103) v2	wmwmbB124
Cla019606	Csa1G448940	Cucumber (Chinese Long) v2	cuwmB009
Cla019606	MELO3C002717	Melon (DHL92) v3.5.1	mewmB147
Cla019606	ClCG03G007080	Watermelon (Charleston Gray)	wcgwmB223
Cla019606	CSPI01G21400	Wild cucumber (PI 183967)	cpiwmB011
Cla019606	gCucsa.212390.2	Cucumber (Gy14) v1	cgywmB408
Cla019606	CmaCh13G005560	Cucurbita maxima (Rimu)	cmawmB186
Cla019606	CmaCh18G004620	Cucurbita maxima (Rimu)	cmawmB370
Cla019606	CmoCh13G005880	Cucurbita moschata (Rifu)	cmowmB174
Cla019606	CmoCh18G004390	Cucurbita moschata (Rifu)	cmowmB362
Cla019606	Lsi02G008680	Bottle gourd (USVL1VR-Ls)	lsiwmB188
Cla019606	Cp4.1LG09g07810	Cucurbita pepo (Zucchini)	cpewmB024
Cla019606	Cp4.1LG20g05010	Cucurbita pepo (Zucchini)	cpewmB508
Cla019606	CsGy1G021110	Cucumber (Gy14) v2	cgybwmB011
Cla019606	MELO3C002717.2	Melon (DHL92) v3.6.1	medwmB144
Cla019606	Carg14543	Silver-seed gourd	carwmB0141
Cla019606	Carg19924	Silver-seed gourd	carwmB0797
Cla019606	CsaV3_1G032650	Cucumber (Chinese Long) v3	cucwmB014
Cla019606	Bhi08G001720	Wax gourd	wgowmB472

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla019606	Silver-seed gourd	carwmB0544
Cla019606	Silver-seed gourd	carwmB0956
Cla019606	Cucumber (Chinese Long) v3	cucwmB506
Cla019606	Watermelon (97103) v2	wmwmbB113
Cla019606	Watermelon (97103) v2	wmwmbB121
Cla019606	Wax gourd	wgowmB367
Cla019606	Wax gourd	wgowmB421
Cla019606	Watermelon (97103) v1	wmwmB084
Cla019606	Watermelon (97103) v1	wmwmB093
Cla019606	Cucumber (Gy14) v1	cgywmB022
Cla019606	Cucurbita maxima (Rimu)	cmawmB622
Cla019606	Cucurbita maxima (Rimu)	cmawmB819
Cla019606	Cucurbita moschata (Rifu)	cmowmB613
Cla019606	Cucurbita moschata (Rifu)	cmowmB809
Cla019606	Melon (DHL92) v3.5.1	mewmB562
Cla019606	Watermelon (Charleston Gray)	wcgwmB125
Cla019606	Cucumber (Chinese Long) v2	cuwmB480
Cla019606	Cucurbita pepo (Zucchini)	cpewmB069
Cla019606	Cucurbita pepo (Zucchini)	cpewmB279
Cla019606	Cucurbita pepo (Zucchini)	cpewmB478
Cla019606	Bottle gourd (USVL1VR-Ls)	lsiwmB053
Cla019606	Bottle gourd (USVL1VR-Ls)	lsiwmB136
Cla019606	Cucumber (Gy14) v2	cgybwmB451
Cla019606	Melon (DHL92) v3.6.1	medwmB549