ClCG03G007080 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG03G007080
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Prefoldin subunit
Location	CG_Chr03 : 8026159 .. 8035927 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTCTACAAGCGCTCTTCGAGAGCTACAGCGCGAGCTGGAGACGAAAGCCAACGATCTCAGCAAGCTACAGAAAGGCAAGACTCTAATCGATTATCGTTTCCTCCCTGTTGTTCATTCGATTAGCACGTTTTATCGAAACATCAATATTTCAATTCAAATACTGCGTCGACTGTGCTATCTGGATTCAATACTATCAATTTACTTTCACAAAAAGCCTAACATGGTGATGGATTTATCAGATATTGCGAAGAACCACCAAGTGAGGAAGAAGTACACTATTCAGCTGGGTGAGAACGAGCTCGTGCTTAAGGTTTTCTCACCCCTCTCACTTGTTTCCTTTACCTGTTTGCTTGTGCATGGTTCAGTAGCGAGGAGGGGAAGTACGATAAGAGAATTTTCTGACTCGTTTATTTCTGTCCGTGCAGAAGTTGCAAAAAATAGAATGAATTGTGTTAATATTCCCCTTTTCGGTTTCAATTTTGTACATTCCTGTGTTATAATGAATTATGATATGTAAATTATCATTAGGGGCAAATTGCGTCAAGGGGATTTTTTTCACTTGATTTGACATGTAGTTTAGATTATGGAAATTTCTTTACATTTATATAATCTGGTATACAATAAGAATTTGAAGCACTCTTATCGGTGGCCATTTTTCTCATTCATTGCTACTACGTGTGAACTTGTTTCTTGATCTGCTTCTTTAATTACCTATGCAGGAATTGGATCTGCTTAATGACGAATCAAATGTATATAAATTGATTGGTCCAGTGCTCGTGAAGCAAGATTTAGCAGAAGCAAATGCGAATGTGCGCAAGAGAATTGAATACATCTCTGCAGAATTGTATGTTTTTTCATTTGTGTTCCATACAGTCTCTTATCAAAAAAAGAAAAAAAAAAGTTTTCCATATAGTTTTTTAGCTCCTGGATAGTAGTGATGATAATACCATAACACTAGGCATTTGAGAACTGTCATCAGACTAATTACCCAATAAGGATGTGATTTTTACCTTTTGGATGGCTCTAGCTTAACCTAGCTGATCATTATGGACTTTGTATATGTTGAAACTATGTTGGATGTTTATGGAAGCAAGATGGAGGAGACAAGATGGGTGTTGTCATCTGAAGTTGCTTGATTGATATGGATTTTGTATTTGCCTATTTACAACCCCTTTCAAGAGTGTCAATTTTTTTTGGATAAGAGATTAAGAGTATCAATTTGGATATCCTTGCCGAGTGTCAGGTCGTACTTCTCTAACCGTGTGGCATCATGATTTACGCCTGTTCATGGTTAGCCTTAAGGGAAACTCAAGTCCCAATCTACTTTTTGCTCATTTTTTTTGAAGCTTCGTCGTACTTTAGGCAAGGTTCTGTCATCCTCAACCGAACTGAACTCATGCAGAGCTGACTTCATTCGGCCATACACGTCACCTATATGTGTATTTTCCAGATTCGTGACTCTAGCCGACTTGCCTCTACCCTAGGCCAAGTCTTGAGGCTCGACCTTGCCCATATACGACGCTGAGGTCATCACAATGTAATGTCATGTATCTCGTCGTCATTTTGGTCCCCAACAACACGGCTCCCATACTTCTATATCACTTTAGAACGTCGCCCGAATGAGCTCGGACCCTTCATTGAGTCAAAACAGACTTATAACACTCTATCGGGGCTTACCGGGTGAAGAGACACTTATTGGGGCTTTCCAGGCATAATAATGCTTACCAGGTTCTATTAGGCCATTACATTGCTTACTGGGACAAGTCGGGGTCCCACATTCTGGATGCCATCCTGAGTGTCGTGACAACATGAACTTTCTCTCTTTTGCTCGGGTTGGGCTTATCGAGAACCGTCATAACCAACCCACGAGTATTTTCCCAACTTGAGGCTTCCTGGACATCCATCCATCCGGACATATTGAGGCATGAACCCTCCTGTGTCCATGCTTGAGTCAATGCAGAGCCAAAATGGCATATACCGAGTATTGTATTGAACCTCCCATTGACATGAAATTCGATGTGCTTCCATATTACATCAATATGGATCTAATTCTAGAGCCGCTCGTCCAAACTCGCGACGAAACCCCCACCTTCAAGGTCATGGCTTGGGGCCCTATCTAGCCCCACTAAGCTTGTCACTGACACTGCCGATGGCATTGATGCTTGTTTTCTTGCTTGTTGCTCAACTTGGTATGCTTGCCACTTATCTTGGTGTGTTGGATGATGCACCGTCCTCCTCGGTTGCATCACGACACTTTTCTTGGCCCTCTGTCTTTGCCGGATGTGTCGACACTCTTGTGTCGCCACTACACTGTCTGCACAAGTGAGGTCACAATCTACTATCTCAAAGTTAGATTGTGACACCGAGCATACTACTTGAAATATTAGCTAGGATGAAAAGAAACAAAGCAAGAGAAACACCTAGTTTAGAACCTTTAGAGGCTTGATAATCATAAGACCTATAGGATTATTTTATTGTTGAGGAAGATGGAAGAAAATGTTGGAAATGTTGGCAATTCGTTTTTCGGTTCTTTGGAAGGTGAAAATTTCAAAGAAGGTGAAGTTCTTTATCTGGCAAGTTTTTCATGGAAGAATCAATAACTTGGATAGGCTCTCGAGGAAGTTGCTATCCTTGGTGGCACCTTTTTGCTGTATTATGGGTCGGAGGGCAGAGGAAAACTTGAATTGTTGAAACTATAATTAAGCTCGTTCGGTTTGGAACTACTTCTTTGGAGTGTTTGGTATTTAGTTGGCACATCACAGAGCTTTTTTATTATCATGATCGAGGAGTTTCTCCTCCATCTCCTGTGTAGGGAAATAGGGAGTTTCTTATGGAAAGTTGGGGTGTATGCTTTGTTATGGAGTATTTTAAGGGAGTGAAGTAATAGAATCTTTAGGGGGATTGAGTGGGATCCTTTCCATGTTTGATCACTGCTGGATGATGCGGCAAATGGTAGCATGCATAAGCATAACCTTTTTAACTTGAGTTTTACCGAATCGATGGGATGAAACTAGATACTTTGAGAAGCCATCGCTTTCTTTGGATTAAGATATAAAAGAAGTCTCACTAATGCAAGTAAGAACATCATTTTTAAAAGAGTCCACCTTAAGCAGATTTTTTTTTTATTAACATTCCAACACTTATTTAAAAATTCAGAAGAGTGCCAATATGGGTTGCAGCTTTGCAAGTTCCAGGTGATCATGCTTGCTTTAATCCTTTAAATGGATAAAAGTCTTTCCAAATGCCTACTATCTTCCAAGAGATAGGTCTCTCTCAGTCCCAACTTGTTGAGAAAATAAAATAGGAAATCCTATTTAGAGTTAAAGAGCTTTGAAAGAATTAGGGATGTTAGCACTCATATCCAGAAAATTGGCTTGAATTATGATAATGACTAATTCAAAATTGCAAAATAAGACATGTCCTCTAATGCTGAAATCTTTATGAGAAAAAAGGAAGAAATTTATCTCCTTGGCGTAGCCATTTGGATATTTTTCCTTCACGAGTGCTTTTCTACTCTCACTATTTTTGTAAGTTGGAGTTTCAAAGTTTTTGCAAGATGTTTCTCTTTGGTTGGCCTAAGCACTTCTTTTGCAGGTTTTTTTTTTTTTATAATGTCCGTGTATTCTTTCATTTTTTTTTCAATGAAAGTTGTCGTTTTCATTAAAAAAAATAAAATAAAAAAACTAAGAGGAAGAGTCCTCCAAGGTTTCAATAATCCAGGTTTATGGAGGGAAGTCTTAGTAATAACCGATAACTGTTCTATCATTTTTTCTCTACAGCTGCTACCAACTACTGGAACCATGTTTTGCTTCCTATTATTTCCTTCCAGTTTCATGATTCATGCAAAACGTCCTCTTTTGTTAGTGATCTCTTGGACCCATGCCAAGAAATGATGGTTCTGAAGCTCATCCCTAAGATCTTTTGAAATAGAGGGATAGAAATAAGGTTAGAGAGAACATCTAAAAAATAGGTCACTTCATATTGAATGGAGGAGATGGTGTAAGTATTAAACTATCCCCTTTTTTCTATCATTCCTTCAATAAGATTTTTCTGACAAAGTCAATTACAAACACCTTGTATATACTATATAGTGCATGTATGCATGTAACTGCTAAGGGAGAAGCTGGAGCAACAAAGAACGTCAAATATGTAAAAAGAAAAAAAGAAGAGTAAATAGGCAGATGAACAAGATCATAATGCGAGAGGAACAAGGAGATGGAGACATAAAATATACATATGACAATTCAATTCTTCACTTGTTTTCTTATCACCAACTATGAGAATAGTAATCTGGTAGACCATTTGATCAAATATTACACCTGTATTTGTGAAACTTAAAAGCAGTAATGTCCAATATGACTACTTGATAATAACTTAATAAGTGTTTCAATTTAAAATCCATGGAATTCTTATTACGTATGGTTAGATAAGTTGAGCTCAGGTTGAGGTTGAGCTCAAGGTGCATAGAACATGTCTCTCAAGTCTCACCCGAGGCCAAAAAAAAAAAAAAAAAAAGTTGCCTGAGTGAGATATGTTGTATTCTATCGACCTTTAGAGGGTCAAATAGTGGTTGATAGACAAGATTCTAGAAGCTGGAAATTGGATTCTTCAGGTTTGTTTTCAGTTAATTCTCGTTAAGCATTTGGTTGCCTCTCCTCCCATGGATAACAAGCTGTATAAAGCTTTGTGAAAATCAAGCTGTCCAAGGAGAATTAATATCATTATTTGGGTTATGATTTTTGGGGCGCTTAATTGTTCCATCACTCTTCAAAGGAAGCCCCAAGTTGCTCACTTTTACCCTCAATTTGTCTTCTTTGTTCAGCGGATAATGAAGATTCTCAACACCTTTTCTTTGATTTCTGTTATCCCAAGGAGAGTTGGAGGAAGCTTTTCATATTGTTTAACCTTCAATGGGTGTTGTGTGATGATTTCAAGTCTAATGTCATCCAACTTCTAGTGGACCCTTGCTTAAAAGCTCAATCTCAATTTTTGTGGGCTAACGCGGTTAAAGCGATTCTCTCTAAAATCTGGTTTGAGAGGAATCAACGCATTTTCCACAATAAGCCACTTCTTTGGTTTGATCGTTATGAGGTTGCTTGAGTCTTTCATACATCAATGAAATTTGTTTCTTACTAAAAAGAAAAAGAAAATTGCTTGAGTCAAAGCTTCTACATGGTGTTCTCTCTAATTATTTTGCAGATTATTTGATTTAAGACATTTGCTTAATCTGGAGTGTTTTTATCACTTCGTCTTAAAGTAAAATCTTTGTTTTAGCCTTGTATTGCTCTTTTTGTATTGACAACTTTTAGCATTATGTTTTATCTCTTCATTTGTAATTTTAGCATTGGTCTTTTTTCATTAATTCAATGAAAAGTCTTGTTTCCATTTAAAAAAAAAGTGTCTTTGTCTTACCTAGGTAATGAGAATTCATATTTGGAGGGCTTAGGCAAAAAAATTATTGTATAGAACATTGCTCTCTACATAAGCAAAAAAAACATACCTAAATAAGAAGGGACGTTTGGGGCACTGAGTTGGTTATTGTAGTTAGTGGGTTATAATAGTCTGTATTTAGGGAGCGGACTATTTTAATCTAGATTATAATAGTTTGTGCGTGGGGTGTAGACTATTTTGGTCTAGGTAGGAAATAGTAAACACTGTAACAAAGAGAGAAAGAGATGATGTAGGAAATGGTAAACAATATAACAAAGAGGGATTTGAAATAGTAATATTGTAGTTAGTTGTAGGTTATAACACCAACTATTATAGTTGGAGCCCCGAACATAGAGTGGGCTATTATAGCCCACTCCACCTCCACCAACTTGCCCAAACACCCCGAAATGACAAGCAGATGGAGAGAGAGTTGAACATATGGAAGGGCATAGGTAAAAAGAGGGAAATAGGTGGGTCAAGAGAGTAAATTTGAGACTACCAATAAGAAACATGAAAGGGGATTTAATATGGGACAGATACAGTTTACCTTTTATTTAGGGTGCCAATTTTCCAAATCTATATCCTTGCATTTCATTCTTTATAAATTGCAACATTCTACTTCCGTATACCTTAATAATAATGAAACTACGTCCATATATCTTAATAATAATGAAAATATAGTTTTCTCGTACTAGTCACCATTTTCATTTGGTTTAATTCAATGATTTTTTGCACAATTCAGGAAACGTCTTGATTCAGCCCTTCAAGATTTGGAAGAGAAGCAAAATAGCAAGAGAGATGCTGTTAGTACTTTTCTTATTTCTGTTGATCTTAAAGCTAACCTTTGGCTGATATTTGCAGGACCCCAAAATAAAGCAATAAAACATTTTTCGTGTGTCTGATTCTTGCTTGTTTATTGGAGAATCTAGAAATGATTTCTTGGCTTCAGATATGAATAATACACACGGCATACAAAAAAGTTTGAAAACAAAGAAACTGAAATCTGAACTTGATTCAAAACCATAGGCAAATTTAGAAAATGACTAAATTTAGGGAAGTTTGTTTGAGCATTCTGCCTCATCTCCTTTTTCCTTGACGTGAAACTAAGTTCAAGATGCATGACCTTCTGTCTGCTACCTTACATCTAGGTTGAACTAGTAGTATAAATAATTGAAGTTGGACTGAATAGTGGTTTTTGAAACTACATCAAAGTCCTCTCCCAATTGAAGCATTGAGGACTGGTGGAGAGAGGGAAAAAAAAAAAAAAAAGAATGAGAAAAAGAATGTCAATATTGACAAAATAGAGTTAATGCATTTCTTTTTTCTTTCCCACGATCTTCCTAAGGTTACTCCATAATGATTAAATAAGGCTTCTTGTTCTTTCAGATTTTTTTGATCTTATGTATTTTCTTACTCCATAAACGAGCTAAATGTTACTCCATGAATTTATAGTTGATTATAGTTAAAAAAAAAAAAAGAAGACACGTTATTATATTAAGTACAAACTAACAAATGTGAAATAAAAAAATTGATGAAAGACAAACATATAGAAGAAAAATTTGAAGGACAGACATGTCAATTGAGTCTGCCCTCTCCTCTACTTGGGCATCTTAAAAAATCCATGTTGCAAGAGGGCATCCAAAAGTTGATAAACACCCCTATGTGAGCAAGATATTTCACATTACTGCAAAGCAAACTGGGTTTCAGATGCCCATCCTATGGGAATCTTGAATTCCCACCAAACAAATGGTACCTTAGCTTTAGGTCCCAAATTCCCAAGTCAGCCTTCCAAAATTACTTGCAGTAGCATTTTTCTGATTGGTGATTGAGAAATTTCTCCTTACAATTACTGATTTTCAGTTTGCTTTCATCAAGGATAGACAAAATATTGATGCTAGGTCTTATTGCAAATGAATTGATTGATTTTAAGGTTTTGTTATAAAGCTTGACATCGAAAATCTTTTGGTAAGGTGGATTGGGTTTTGTTAGATTACATTAAACTCTTGAAAGGCTTTGAAAACTGATGAGATAATGGGTTATAGGGTATTTCTCCTCTCCAATCTTATCATTGGAAAGCCTAGGGAAAAGTTTTAGGGTATAAGACAAGGATGTCTCTGTCACCTTTCATCTTCATTCTGGTCAGTGATTCTTTTAGCCGCCTTTTTTTTAGAGAGGTATGAGCACAAGCTTTTTGGAAGGCTCTTCCATTGGAGATTTCTCTCCTTTAAACCATTTGCAATTCATTGATAATACAGTCCTGTTTTCTTGTTCATCTCTGGAAAATGATATGAATTTTAAGTTATCGGGAGTTTTAAGATTCTTTGAGCCTTAATGCAACCATGAGTAAGACTAAGGTCCTTCGCATCAAAGATTAGCAACTTTCACCTTCAAGAAGCTGCAAATATCTTCAGTTGTTGAATCAAAAATTGCCTTCTGCCTACCTTGGCCTTCCTCTCATGGGAAACCCCCAAAATAGATCCTTTCGGGATTCTGTGCTCATAAAGATACAAAAGATGGTCCAAGGATGGTTTTTTCTCCAAATATGGTAGCCAGGTTCTTATTCTTTCATTCCTATTCTGCCTCCCAATATACTACATTTCTTGTTTTCAGATGCCAAAAGGGATGGCTAAATCTTTTGAAAAAAGGTTTTAAGACTTCAATGGAAAGAGGCTAAATACCTAGTGGCTTGGGATAAAATCTCCTGCTTCGCAATGGGGTCTAGGCCTCGTAACATCCTGGAGAAAAACAAATCCCTCATGGCAAGGCGGATTAGGAGATTTGCCTAGGAAAAAGTAGCCTTATGGAGACTCCATCTGTGACAAGTATGGTCCAACTGATCTGGATTGCTAGCCTGACGGCAAGTACATCTCCCTCTATAGAGTCCCTTAGAGATACTTGGAAGCCCAAATCTGTGATTTCTGCAAACACAGTCTATAAGGTTGATAATGGCCTAGACTTTTGTAAATAGCCTGAATTCTTACTTTTGGAAAGATCCATGGATGAGCGATTGTCCCCTTAAACACACTTTCCCAAATCTCCACCGTCTCTCAAATGAGAACAACAAATTGGTGGCTGGTCTTTGGGACAACCAATCAAATCTGTGGAACCTAAACTATAGAAGAATTTGAATGAGGAAAAAAATTGAAGATTGGCTTCCTTTGATGGACAAGATAAACATCAAAGCTTTAGGACAAAATCCTTATTGCTGGTTTTAGCCCCTTTGACAGGGGCTGCATACATGGGGACCTTAGAACACACCCCCTTGTTGCCAAAAAAATAAAAGAATTCCTCCATCATCTTTCTATAGTCACGTTGGCTAGCCAGATCAAAACCAAGCTAATCAAAGAAACAAGTCCACACGGCATAAGTAAAATCACAACTCTAAAGCATATGATCAAGGTCCTCTGCTGCTGCCCTTCTACAAGAATGCAATACCAAGACCCCGTCAAATTAGATATCTTCCTTGACACCCTGTCCAAGGTATTAACCCTTTCATGGAGAATCTGCCAAACAATAAACTTAACCTTCTTTGGAATTTTCATTCTCCACATAGAAGCAAAAATCAAATCTCTCTCCGGAGAAGGGTTAACCAGTCAAAGAGAAGGATTTACAGGAAAAATCCTCGGAGGGCTAGGGCACCATAAGCGAAATCTCCTTTTCCCAGAAGAGCATTGAAACTCCCCTAACAAAGAAAGGATAGCAACAATGTCTCCCCGTTTCCCTTTGAGACAACAAATGATGGAATTTCAAAATGGAGGCTGGCTGAGCCAGAACATCAGCCACCGAAACAAACTGGTATTGGTTGTTCACGATGAATTTGTGAGTGTAATGCTTAACATTGAATGTAGAGGCTGAATGGGATAAAGGCTTCTTTTGTCAGATTCGTTCTAGAAACAAAAACTTCCTTATTTCAGCACGATCATTAGTTGGATTTGTATAAAACCTTTTCTGCTTTGGATATTACTCAAATACTTTGCAATTCATTTGCTTATTGTTGGTTTGCTGTCTTGCAGATATTGAAGTTACAGCAGAGGATACAATCTCTGCAGGCTGGAAAAGCTAAAGCGTAACATGTTTTATTGTTGTTTTTCAGCTGTACGTCCTAAACTTATGTTTATCTTTTTGCAATCTCTCTTGTATGAGTTACAGATACACTGCTCACTCAAAATCTTGACAATATTTCATTAGTTCGATTTTGATATTAGATAAGTGCATAGCTTTTGTATTTCTTGCAAAGTACTTAACGAGAACTTAGCATCTATAAAAAATATTTTGCATTTGTAATTTGACAAGAACTTGGCATCTTGAAAGAAAAAGTATTGATGATAATTTTC

mRNA sequence

ATGAGTTCTACAAGCGCTCTTCGAGAGCTACAGCGCGAGCTGGAGACGAAAGCCAACGATCTCAGCAAGCTACAGAAAGGCAAGACTCTAATCGATTATCGTTTCCTCCCTGTTGTTCATTCGATTAGCACGTTTTATCGAAACATCAATATTTCAATTCAAATACTGCGTCGACTGTGCTATCTGGATTCAATACTATCAATTTACTTTCACAAAAAGCCTAACATGGTGATGGATTTATCAGATATTGCGAAGAACCACCAAGTGAGGAAGAAGTACACTATTCAGCTGGGTGAGAACGAGCTCGTGCTTAAGGAATTGGATCTGCTTAATGACGAATCAAATGTATATAAATTGATTGGTCCAGTGCTCGTGAAGCAAGATTTAGCAGAAGCAAATGCGAATGTGCGCAAGAGAATTGAATACATCTCTGCAGAATTGAAACGTCTTGATTCAGCCCTTCAAGATTTGGAAGAGAAGCAAAATAGCAAGAGAGATGCTATATTGAAGTTACAGCAGAGGATACAATCTCTGCAGGCTGGAAAAGCTAAAGCGTAACATGTTTTATTGTTGTTTTTCAGCTGTACGTCCTAAACTTATGTTTATCTTTTTGCAATCTCTCTTGTATGAGTTACAGATACACTGCTCACTCAAAATCTTGACAATATTTCATTAGTTCGATTTTGATATTAGATAAGTGCATAGCTTTTGTATTTCTTGCAAAGTACTTAACGAGAACTTAGCATCTATAAAAAATATTTTGCATTTGTAATTTGACAAGAACTTGGCATCTTGAAAGAAAAAGTATTGATGATAATTTTC

Coding sequence (CDS)

ATGAGTTCTACAAGCGCTCTTCGAGAGCTACAGCGCGAGCTGGAGACGAAAGCCAACGATCTCAGCAAGCTACAGAAAGGCAAGACTCTAATCGATTATCGTTTCCTCCCTGTTGTTCATTCGATTAGCACGTTTTATCGAAACATCAATATTTCAATTCAAATACTGCGTCGACTGTGCTATCTGGATTCAATACTATCAATTTACTTTCACAAAAAGCCTAACATGGTGATGGATTTATCAGATATTGCGAAGAACCACCAAGTGAGGAAGAAGTACACTATTCAGCTGGGTGAGAACGAGCTCGTGCTTAAGGAATTGGATCTGCTTAATGACGAATCAAATGTATATAAATTGATTGGTCCAGTGCTCGTGAAGCAAGATTTAGCAGAAGCAAATGCGAATGTGCGCAAGAGAATTGAATACATCTCTGCAGAATTGAAACGTCTTGATTCAGCCCTTCAAGATTTGGAAGAGAAGCAAAATAGCAAGAGAGATGCTATATTGAAGTTACAGCAGAGGATACAATCTCTGCAGGCTGGAAAAGCTAAAGCGTAA

Protein sequence

MSSTSALRELQRELETKANDLSKLQKGKTLIDYRFLPVVHSISTFYRNINISIQILRRLCYLDSILSIYFHKKPNMVMDLSDIAKNHQVRKKYTIQLGENELVLKELDLLNDESNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSALQDLEEKQNSKRDAILKLQQRIQSLQAGKAKA

Homology

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BLAST of ClCG03G007080 vs. Swiss-Prot
Match: PFD6_BOVIN (Prefoldin subunit 6 OS=Bos taurus GN=PFDN6 PE=2 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.0e-20
Identity = 51/104 (49.04%), Postives = 72/104 (69.23%), Query Frame = 1


Query: 82  DIAKNHQVRKKYTIQLGENELVLKELDLLNDESNVYKLIGPVLVKQDLAEANANVRKRIE 141
           D++K+   R+K   QL EN +V +EL LL+  + V+KL+GPVLVKQ+L EA A V KR++
Sbjct: 22  DLSKSMSGRQKLEAQLTENNIVKEELALLDGSNVVFKLLGPVLVKQELGEARATVGKRLD 81

Query: 142 YISAELKRLDSALQDLEEKQNSKRDAILKLQQRIQSLQAGKAKA 186
           YI+AE+KR +S L+DLE++   +R+ + +LQQ  Q  QA KA A
Sbjct: 82  YITAEIKRYESQLRDLEQQSEQQRETLAQLQQEFQRAQAAKAGA 125

[Close]

BLAST of ClCG03G007080 vs. Swiss-Prot
Match: PFD6_HUMAN (Prefoldin subunit 6 OS=Homo sapiens GN=PFDN6 PE=1 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 3.4e-20
Identity = 51/104 (49.04%), Postives = 71/104 (68.27%), Query Frame = 1


Query: 82  DIAKNHQVRKKYTIQLGENELVLKELDLLNDESNVYKLIGPVLVKQDLAEANANVRKRIE 141
           D++K+   R+K   QL EN +V +EL LL+  + V+KL+GPVLVKQ+L EA A V KR++
Sbjct: 22  DLSKSMSGRQKLEAQLTENNIVKEELALLDGSNVVFKLLGPVLVKQELGEARATVGKRLD 81

Query: 142 YISAELKRLDSALQDLEEKQNSKRDAILKLQQRIQSLQAGKAKA 186
           YI+AE+KR +S L+DLE +   +R+ + +LQQ  Q  QA KA A
Sbjct: 82  YITAEIKRYESQLRDLERQSEQQRETLAQLQQEFQRAQAAKAGA 125

[Close]

BLAST of ClCG03G007080 vs. Swiss-Prot
Match: PFD6_CANLF (Prefoldin subunit 6 OS=Canis lupus familiaris GN=PFDN6 PE=3 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 3.4e-20
Identity = 51/104 (49.04%), Postives = 71/104 (68.27%), Query Frame = 1


Query: 82  DIAKNHQVRKKYTIQLGENELVLKELDLLNDESNVYKLIGPVLVKQDLAEANANVRKRIE 141
           D++K+   R+K   QL EN +V +EL LL+  + V+KL+GPVLVKQ+L EA A V KR++
Sbjct: 22  DLSKSMSGRQKLEAQLTENNIVKEELALLDGSNVVFKLLGPVLVKQELGEARATVGKRLD 81

Query: 142 YISAELKRLDSALQDLEEKQNSKRDAILKLQQRIQSLQAGKAKA 186
           YI+AE+KR +S L+DLE +   +R+ + +LQQ  Q  QA KA A
Sbjct: 82  YITAEIKRYESQLRDLERQSEQQRETLAQLQQEFQRAQAAKAGA 125

[Close]

BLAST of ClCG03G007080 vs. Swiss-Prot
Match: PFD6_MOUSE (Prefoldin subunit 6 OS=Mus musculus GN=Pfdn6 PE=1 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 5.8e-20
Identity = 50/102 (49.02%), Postives = 70/102 (68.63%), Query Frame = 1


Query: 82  DIAKNHQVRKKYTIQLGENELVLKELDLLNDESNVYKLIGPVLVKQDLAEANANVRKRIE 141
           D++K+   R+K   QL EN +V +EL LL+  + V+KL+GPVLVKQ+L EA A V KR++
Sbjct: 22  DLSKSMSGRQKLEAQLTENNIVKEELALLDGSNVVFKLLGPVLVKQELGEARATVGKRLD 81

Query: 142 YISAELKRLDSALQDLEEKQNSKRDAILKLQQRIQSLQAGKA 184
           YI+AE+KR +S L+DLE +   +R+ + +LQQ  Q  QA KA
Sbjct: 82  YITAEIKRYESQLRDLERQSEQQRETLAQLQQEFQRAQAAKA 123

[Close]

BLAST of ClCG03G007080 vs. Swiss-Prot
Match: PFD6_CAEBR (Probable prefoldin subunit 6 OS=Caenorhabditis briggsae GN=pfd-6 PE=3 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.5e-15
Identity = 39/97 (40.21%), Postives = 66/97 (68.04%), Query Frame = 1


Query: 82  DIAKNHQVRKKYTIQLGENELVLKELDLLNDESNVYKLIGPVLVKQDLAEANANVRKRIE 141
           D  K    R++  ++L E++ V  ELDL++ +S VYKL+GPVLV+QDL EA + V KR+E
Sbjct: 20  DREKYFSSRQEMEMRLTESKNVKAELDLMDSDSKVYKLMGPVLVRQDLEEARSTVEKRLE 79

Query: 142 YISAELKRLDSALQDLEEKQNSKRDAILKLQQRIQSL 179
           +I +E+KR+++++ D+ +K   +RD ++ +Q+  Q +
Sbjct: 80  FIESEIKRVEASITDVNKKSIEQRDKVMNMQKAFQMM 116

[Close]

BLAST of ClCG03G007080 vs. TrEMBL
Match: A0A067KPA0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04610 PE=4 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 1.1e-46
Identity = 108/169 (63.91%), Postives = 128/169 (75.74%), Query Frame = 1


Query: 1   MSSTSALRELQRELETKANDLSKLQKGKTLIDYRFLPVVHSISTFYRNINISIQILRRLC 60
           M+S++A+RELQR+LE KANDLSK QKGK L+ +   P  +SI T                
Sbjct: 1   MASSTAIRELQRDLENKANDLSKHQKGKLLVSFFTEP--YSICT---------------- 60

Query: 61  YLDSILSIYFHKKPNMVMD-LSDIAKNHQVRKKYTIQLGENELVLKELDLLNDESNVYKL 120
               +L I+  K P M    ++DIAKNHQVRKKYT+QLGENELVLKELDLL +++NVYKL
Sbjct: 61  ---QLLIIFKDKNPKMTQQSMADIAKNHQVRKKYTVQLGENELVLKELDLLKEDANVYKL 120

Query: 121 IGPVLVKQDLAEANANVRKRIEYISAELKRLDSALQDLEEKQNSKRDAI 169
           IGPVLVKQDLAEANANVRKRI+YISAELKRLD+ LQDLEEKQNSK+DA+
Sbjct: 121 IGPVLVKQDLAEANANVRKRIDYISAELKRLDATLQDLEEKQNSKKDAL 148

[Close]

BLAST of ClCG03G007080 vs. TrEMBL
Match: A0A059C611_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E02397 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 2.8e-45
Identity = 101/115 (87.83%), Postives = 106/115 (92.17%), Query Frame = 1


Query: 75  NMVMDLS----DIAKNHQVRKKYTIQLGENELVLKELDLLNDESNVYKLIGPVLVKQDLA 134
           N   DLS    DIAKNHQVRKKYTIQLGENELVLKELDLLN+++NVYKLIGPVLVKQDLA
Sbjct: 16  NKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLNEDANVYKLIGPVLVKQDLA 75

Query: 135 EANANVRKRIEYISAELKRLDSALQDLEEKQNSKRDAILKLQQRIQSLQAGKAKA 186
           EANANVRKRI+YISAELKRLD+ LQDLEEKQNSKRD ILKLQQRIQSLQAGKAKA
Sbjct: 76  EANANVRKRIDYISAELKRLDATLQDLEEKQNSKRDMILKLQQRIQSLQAGKAKA 130

[Close]

BLAST of ClCG03G007080 vs. TrEMBL
Match: A0A059C611_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E02397 PE=4 SV=1)

HSP 1 Score: 44.7 bits (104), Expect = 1.5e-01
Identity = 37/111 (33.33%), Postives = 60/111 (54.05%), Query Frame = 1


Query: 1   MSSTSALRELQRELETKANDLSKLQKGKTLIDYRFLPVVHSISTFYR-NINISIQILRRL 60
           MS++SALR+LQR+LE KANDLSKLQK         +   H +   Y   +  +  +L+ L
Sbjct: 1   MSTSSALRDLQRDLENKANDLSKLQKD--------IAKNHQVRKKYTIQLGENELVLKEL 60

Query: 61  CYLDSILSIYFHKKPNMV-MDLSDIAKNHQVRKKY-TIQLGENELVLKELD 109
             L+   ++Y    P +V  DL++   N + R  Y + +L   +  L++L+
Sbjct: 61  DLLNEDANVYKLIGPVLVKQDLAEANANVRKRIDYISAELKRLDATLQDLE 103

HSP 2 Score: 187.6 bits (475), Expect = 1.4e-44
Identity = 100/115 (86.96%), Postives = 107/115 (93.04%), Query Frame = 1


Query: 75  NMVMDLS----DIAKNHQVRKKYTIQLGENELVLKELDLLNDESNVYKLIGPVLVKQDLA 134
           N   DLS    DIAKNHQVRKKYTIQLGENELVLKELDLL +++NVYKLIGPVLVKQDLA
Sbjct: 17  NKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLKEDANVYKLIGPVLVKQDLA 76

Query: 135 EANANVRKRIEYISAELKRLDSALQDLEEKQNSKRDAILKLQQRIQSLQAGKAKA 186
           EANANVRKRIEYISAELKRLDS+LQDLEEKQ+SKR+AILK+QQRIQSLQAGKAKA
Sbjct: 77  EANANVRKRIEYISAELKRLDSSLQDLEEKQHSKREAILKVQQRIQSLQAGKAKA 131

[Close]

BLAST of ClCG03G007080 vs. TrEMBL
Match: A0A0D2UM46_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G043400 PE=4 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 1.3e-02
Identity = 58/186 (31.18%), Postives = 79/186 (42.47%), Query Frame = 1


Query: 2   SSTSALRELQRELETKANDLSKLQKGKTLIDYRFLPVVHSISTFYR-NINISIQILRRLC 61
           SS++ALR+LQ +LE KANDLSKLQK         +   H +   Y   +  +  +L+ L 
Sbjct: 3   SSSTALRDLQSDLENKANDLSKLQKD--------IAKNHQVRKKYTIQLGENELVLKELD 62

Query: 62  YLDSILSIYFHKKPNMVMDLSDIAK-NHQVRKKYTIQLGENELVLKELDLLNDESNVYKL 121
            L    ++Y  K    V+   D+A+ N  VRK+        E +  EL  L+        
Sbjct: 63  LLKEDANVY--KLIGPVLVKQDLAEANANVRKRI-------EYISAELKRLDSS------ 122

Query: 122 IGPVLVKQDLAEANANVRKRIEYISAELKRLDSALQDLEEKQNSKRDAILKLQQRIQSLQ 181
                  QDL E   + R+ I                             K+QQRIQSLQ
Sbjct: 123 ------LQDLEEKQHSKREAIL----------------------------KVQQRIQSLQ 131

Query: 182 AGKAKA 186
           AGKAKA
Sbjct: 183 AGKAKA 131

HSP 2 Score: 185.7 bits (470), Expect = 5.3e-44
Identity = 99/115 (86.09%), Postives = 106/115 (92.17%), Query Frame = 1


Query: 75  NMVMDLS----DIAKNHQVRKKYTIQLGENELVLKELDLLNDESNVYKLIGPVLVKQDLA 134
           N   DLS    DIAKNHQVRKKYTIQLGENELVLKELDLLN+++NVYKLIGPVLVKQDLA
Sbjct: 17  NKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLNEDANVYKLIGPVLVKQDLA 76

Query: 135 EANANVRKRIEYISAELKRLDSALQDLEEKQNSKRDAILKLQQRIQSLQAGKAKA 186
           EANANVRKRIEYISAELKRLD +LQDLEEKQ+SKR+AILK+QQRIQS QAGKAKA
Sbjct: 77  EANANVRKRIEYISAELKRLDGSLQDLEEKQHSKREAILKVQQRIQSHQAGKAKA 131

[Close]

BLAST of ClCG03G007080 vs. TrEMBL
Match: A0A0D2QGV1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G155300 PE=4 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 1.7e-02
Identity = 58/186 (31.18%), Postives = 80/186 (43.01%), Query Frame = 1


Query: 2   SSTSALRELQRELETKANDLSKLQKGKTLIDYRFLPVVHSISTFYR-NINISIQILRRLC 61
           SS++ALRELQ++LE KANDLSKLQK         +   H +   Y   +  +  +L+ L 
Sbjct: 3   SSSTALRELQQDLENKANDLSKLQKD--------IAKNHQVRKKYTIQLGENELVLKELD 62

Query: 62  YLDSILSIYFHKKPNMVMDLSDIAK-NHQVRKKYTIQLGENELVLKELDLLNDESNVYKL 121
            L+   ++Y  K    V+   D+A+ N  VRK+        E +  EL  L+        
Sbjct: 63  LLNEDANVY--KLIGPVLVKQDLAEANANVRKRI-------EYISAELKRLDGS------ 122

Query: 122 IGPVLVKQDLAEANANVRKRIEYISAELKRLDSALQDLEEKQNSKRDAILKLQQRIQSLQ 181
                  QDL E   + R+ I                             K+QQRIQS Q
Sbjct: 123 ------LQDLEEKQHSKREAIL----------------------------KVQQRIQSHQ 131

Query: 182 AGKAKA 186
           AGKAKA
Sbjct: 183 AGKAKA 131

HSP 2 Score: 185.3 bits (469), Expect = 6.9e-44
Identity = 95/104 (91.35%), Postives = 104/104 (100.00%), Query Frame = 1


Query: 82  DIAKNHQVRKKYTIQLGENELVLKELDLLNDESNVYKLIGPVLVKQDLAEANANVRKRIE 141
           +IAK+HQVRKKYTIQLGENELVLKELDLLN+++NVYKLIGPVLVKQDLAEANANVRKRIE
Sbjct: 2   NIAKSHQVRKKYTIQLGENELVLKELDLLNEDANVYKLIGPVLVKQDLAEANANVRKRIE 61

Query: 142 YISAELKRLDSALQDLEEKQNSKRDAILKLQQRIQSLQAGKAKA 186
           YISAELKRLDS+LQDLEEKQ+SKR+AILK+QQRIQSLQAGKAKA
Sbjct: 62  YISAELKRLDSSLQDLEEKQHSKREAILKVQQRIQSLQAGKAKA 105

[Close]

BLAST of ClCG03G007080 vs. TAIR10
Match: AT1G29990.1 (AT1G29990.1 prefoldin 6)

HSP 1 Score: 178.3 bits (451), Expect = 4.3e-45
Identity = 88/104 (84.62%), Postives = 98/104 (94.23%), Query Frame = 1


Query: 82  DIAKNHQVRKKYTIQLGENELVLKELDLLNDESNVYKLIGPVLVKQDLAEANANVRKRIE 141
           DI KNHQ+RKKYTIQLGENELVLKELDLL +++NVYKLIGPVLVKQDLAEANANVRKRIE
Sbjct: 26  DIGKNHQLRKKYTIQLGENELVLKELDLLEEDANVYKLIGPVLVKQDLAEANANVRKRIE 85

Query: 142 YISAELKRLDSALQDLEEKQNSKRDAILKLQQRIQSLQAGKAKA 186
           YISAELKRLD+ LQD+EEKQN+KR+ I+KLQQR+Q++QAGKAKA
Sbjct: 86  YISAELKRLDAILQDMEEKQNNKRETIMKLQQRLQTIQAGKAKA 129

HSP 2 Score: 49.3 bits (116), Expect = 3.0e-06
Identity = 56/187 (29.95%), Postives = 79/187 (42.25%), Query Frame = 1


Query: 3   STSALRELQRELETKANDLSKLQK--GKTLIDYRFLPVVHSISTFYR-NINISIQILRRL 62
           S+S +R+LQR+LE KANDL K+QK  GK           H +   Y   +  +  +L+ L
Sbjct: 2   SSSTVRDLQRDLENKANDLGKIQKDIGKN----------HQLRKKYTIQLGENELVLKEL 61

Query: 63  CYLDSILSIYFHKKPNMVMDLSDIAK-NHQVRKKYTIQLGENELVLKELDLLNDESNVYK 122
             L+   ++Y  K    V+   D+A+ N  VRK+      E    LK LD          
Sbjct: 62  DLLEEDANVY--KLIGPVLVKQDLAEANANVRKRIEYISAE----LKRLD---------- 121

Query: 123 LIGPVLVKQDLAEANANVRKRIEYISAELKRLDSALQDLEEKQNSKRDAILKLQQRIQSL 182
                 + QD+ E   N R+ I                            +KLQQR+Q++
Sbjct: 122 -----AILQDMEEKQNNKRETI----------------------------MKLQQRLQTI 129

Query: 183 QAGKAKA 186
           QAGKAKA
Sbjct: 182 QAGKAKA 129

[Close]

BLAST of ClCG03G007080 vs. NCBI nr
Match: gi|643730535|gb|KDP37967.1| (hypothetical protein JCGZ_04610 [Jatropha curcas])

HSP 1 Score: 194.5 bits (493), Expect = 1.6e-46
Identity = 108/169 (63.91%), Postives = 128/169 (75.74%), Query Frame = 1


Query: 1   MSSTSALRELQRELETKANDLSKLQKGKTLIDYRFLPVVHSISTFYRNINISIQILRRLC 60
           M+S++A+RELQR+LE KANDLSK QKGK L+ +   P  +SI T                
Sbjct: 1   MASSTAIRELQRDLENKANDLSKHQKGKLLVSFFTEP--YSICT---------------- 60

Query: 61  YLDSILSIYFHKKPNMVMD-LSDIAKNHQVRKKYTIQLGENELVLKELDLLNDESNVYKL 120
               +L I+  K P M    ++DIAKNHQVRKKYT+QLGENELVLKELDLL +++NVYKL
Sbjct: 61  ---QLLIIFKDKNPKMTQQSMADIAKNHQVRKKYTVQLGENELVLKELDLLKEDANVYKL 120

Query: 121 IGPVLVKQDLAEANANVRKRIEYISAELKRLDSALQDLEEKQNSKRDAI 169
           IGPVLVKQDLAEANANVRKRI+YISAELKRLD+ LQDLEEKQNSK+DA+
Sbjct: 121 IGPVLVKQDLAEANANVRKRIDYISAELKRLDATLQDLEEKQNSKKDAL 148

[Close]

BLAST of ClCG03G007080 vs. NCBI nr
Match: gi|659068358|ref|XP_008444032.1| (PREDICTED: prefoldin subunit 6 [Cucumis melo])

HSP 1 Score: 191.8 bits (486), Expect = 1.1e-45
Identity = 99/104 (95.19%), Postives = 102/104 (98.08%), Query Frame = 1


Query: 82  DIAKNHQVRKKYTIQLGENELVLKELDLLNDESNVYKLIGPVLVKQDLAEANANVRKRIE 141
           DIAKNHQVRKKYT+QLGENELVLKELDLL D++NVYKLIGPVLVKQDLAEANANVRKRIE
Sbjct: 27  DIAKNHQVRKKYTVQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIE 86

Query: 142 YISAELKRLDSALQDLEEKQNSKRDAILKLQQRIQSLQAGKAKA 186
           YISAELKRLDSALQDLEEKQNS RDAILKLQQRIQSLQAGKAKA
Sbjct: 87  YISAELKRLDSALQDLEEKQNSNRDAILKLQQRIQSLQAGKAKA 130

[Close]

BLAST of ClCG03G007080 vs. NCBI nr
Match: gi|659068358|ref|XP_008444032.1| (PREDICTED: prefoldin subunit 6 [Cucumis melo])

HSP 1 Score: 49.7 bits (117), Expect = 6.5e-03
Identity = 41/111 (36.94%), Postives = 60/111 (54.05%), Query Frame = 1


Query: 1   MSSTSALRELQRELETKANDLSKLQKGKTLIDYRFLPVVHSISTFYR-NINISIQILRRL 60
           MSSTSALRELQRELE KANDLSKLQK         +   H +   Y   +  +  +L+ L
Sbjct: 1   MSSTSALRELQRELEAKANDLSKLQKD--------IAKNHQVRKKYTVQLGENELVLKEL 60

Query: 61  CYLDSILSIYFHKKPNMV-MDLSDIAKNHQVRKKY-TIQLGENELVLKELD 109
             L    ++Y    P +V  DL++   N + R +Y + +L   +  L++L+
Sbjct: 61  DLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSALQDLE 103

HSP 2 Score: 189.9 bits (481), Expect = 4.0e-45
Identity = 101/115 (87.83%), Postives = 106/115 (92.17%), Query Frame = 1


Query: 75  NMVMDLS----DIAKNHQVRKKYTIQLGENELVLKELDLLNDESNVYKLIGPVLVKQDLA 134
           N   DLS    DIAKNHQVRKKYTIQLGENELVLKELDLLN+++NVYKLIGPVLVKQDLA
Sbjct: 16  NKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLNEDANVYKLIGPVLVKQDLA 75

Query: 135 EANANVRKRIEYISAELKRLDSALQDLEEKQNSKRDAILKLQQRIQSLQAGKAKA 186
           EANANVRKRI+YISAELKRLD+ LQDLEEKQNSKRD ILKLQQRIQSLQAGKAKA
Sbjct: 76  EANANVRKRIDYISAELKRLDATLQDLEEKQNSKRDMILKLQQRIQSLQAGKAKA 130

[Close]

BLAST of ClCG03G007080 vs. NCBI nr
Match: gi|702344701|ref|XP_010056888.1| (PREDICTED: prefoldin subunit 6 [Eucalyptus grandis])

HSP 1 Score: 44.7 bits (104), Expect = 2.1e-01
Identity = 37/111 (33.33%), Postives = 60/111 (54.05%), Query Frame = 1


Query: 1   MSSTSALRELQRELETKANDLSKLQKGKTLIDYRFLPVVHSISTFYR-NINISIQILRRL 60
           MS++SALR+LQR+LE KANDLSKLQK         +   H +   Y   +  +  +L+ L
Sbjct: 1   MSTSSALRDLQRDLENKANDLSKLQKD--------IAKNHQVRKKYTIQLGENELVLKEL 60

Query: 61  CYLDSILSIYFHKKPNMV-MDLSDIAKNHQVRKKY-TIQLGENELVLKELD 109
             L+   ++Y    P +V  DL++   N + R  Y + +L   +  L++L+
Sbjct: 61  DLLNEDANVYKLIGPVLVKQDLAEANANVRKRIDYISAELKRLDATLQDLE 103

HSP 2 Score: 188.3 bits (477), Expect = 1.2e-44
Identity = 97/104 (93.27%), Postives = 100/104 (96.15%), Query Frame = 1


Query: 82  DIAKNHQVRKKYTIQLGENELVLKELDLLNDESNVYKLIGPVLVKQDLAEANANVRKRIE 141
           DIAKNHQVRKKYTIQLGENELVLKELDLL D++NVYKLIGPVLVKQDLAEANANVRKRIE
Sbjct: 27  DIAKNHQVRKKYTIQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIE 86

Query: 142 YISAELKRLDSALQDLEEKQNSKRDAILKLQQRIQSLQAGKAKA 186
           YISAELKRLDS LQDLEEKQN KRD +LKLQQRIQSLQAGKAKA
Sbjct: 87  YISAELKRLDSILQDLEEKQNRKRDVVLKLQQRIQSLQAGKAKA 130

[Close]

BLAST of ClCG03G007080 vs. NCBI nr
Match: gi|449459354|ref|XP_004147411.1| (PREDICTED: prefoldin subunit 6 [Cucumis sativus])

HSP 1 Score: 47.0 bits (110), Expect = 4.2e-02
Identity = 38/111 (34.23%), Postives = 61/111 (54.95%), Query Frame = 1


Query: 1   MSSTSALRELQRELETKANDLSKLQKGKTLIDYRFLPVVHSISTFYR-NINISIQILRRL 60
           MSS++ALRE+QRELE KANDLSKLQK         +   H +   Y   +  +  +L+ L
Sbjct: 1   MSSSTALREVQRELEAKANDLSKLQKD--------IAKNHQVRKKYTIQLGENELVLKEL 60

Query: 61  CYLDSILSIYFHKKPNMV-MDLSDIAKNHQVRKKY-TIQLGENELVLKELD 109
             L    ++Y    P +V  DL++   N + R +Y + +L   + +L++L+
Sbjct: 61  DLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSILQDLE 103

HSP 2 Score: 187.6 bits (475), Expect = 2.0e-44
Identity = 100/115 (86.96%), Postives = 107/115 (93.04%), Query Frame = 1


Query: 75  NMVMDLS----DIAKNHQVRKKYTIQLGENELVLKELDLLNDESNVYKLIGPVLVKQDLA 134
           N   DLS    DIAKNHQVRKKYTIQLGENELVLKELDLL +++NVYKLIGPVLVKQDLA
Sbjct: 17  NKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLKEDANVYKLIGPVLVKQDLA 76

Query: 135 EANANVRKRIEYISAELKRLDSALQDLEEKQNSKRDAILKLQQRIQSLQAGKAKA 186
           EANANVRKRIEYISAELKRLDS+LQDLEEKQ+SKR+AILK+QQRIQSLQAGKAKA
Sbjct: 77  EANANVRKRIEYISAELKRLDSSLQDLEEKQHSKREAILKVQQRIQSLQAGKAKA 131

The following BLAST results are available for this feature:

BLAST of ClCG03G007080 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PFD6_BOVIN	2.0e-20	49.04	Prefoldin subunit 6 OS=Bos taurus GN=PFDN6 PE=2 SV=1	[more]
PFD6_HUMAN	3.4e-20	49.04	Prefoldin subunit 6 OS=Homo sapiens GN=PFDN6 PE=1 SV=1	[more]
PFD6_CANLF	3.4e-20	49.04	Prefoldin subunit 6 OS=Canis lupus familiaris GN=PFDN6 PE=3 SV=1	[more]
PFD6_MOUSE	5.8e-20	49.02	Prefoldin subunit 6 OS=Mus musculus GN=Pfdn6 PE=1 SV=1	[more]
PFD6_CAEBR	1.5e-15	40.21	Probable prefoldin subunit 6 OS=Caenorhabditis briggsae GN=pfd-6 PE=3 SV=1	[more]

BLAST of ClCG03G007080 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A067KPA0_JATCU	1.1e-46	63.91	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04610 PE=4 SV=1	[more]
A0A059C611_EUCGR	2.8e-45	87.83	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E02397 PE=4 SV=1	[more]
A0A059C611_EUCGR	1.5e-01	33.33	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E02397 PE=4 SV=1	[more]
A0A0D2UM46_GOSRA	1.3e-02	31.18	Uncharacterized protein OS=Gossypium raimondii GN=B456_011G043400 PE=4 SV=1	[more]
A0A0D2QGV1_GOSRA	1.7e-02	31.18	Uncharacterized protein OS=Gossypium raimondii GN=B456_009G155300 PE=4 SV=1	[more]

BLAST of ClCG03G007080 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G29990.1	4.3e-45	84.62	prefoldin 6	[more]

BLAST of ClCG03G007080 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|643730535\|gb\|KDP37967.1\|	1.6e-46	63.91	hypothetical protein JCGZ_04610 [Jatropha curcas]	[more]
gi\|659068358\|ref\|XP_008444032.1\|	1.1e-45	95.19	PREDICTED: prefoldin subunit 6 [Cucumis melo]	[more]
gi\|659068358\|ref\|XP_008444032.1\|	6.5e-03	36.94	PREDICTED: prefoldin subunit 6 [Cucumis melo]	[more]
gi\|702344701\|ref\|XP_010056888.1\|	2.1e-01	33.33	PREDICTED: prefoldin subunit 6 [Eucalyptus grandis]	[more]
gi\|449459354\|ref\|XP_004147411.1\|	4.2e-02	34.23	PREDICTED: prefoldin subunit 6 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002777	PFD_beta-like
IPR009053	Prefoldin

Vocabulary: **Biological Process**
Term	Definition
GO:0006457	protein folding

Vocabulary: **Cellular Component**
Term	Definition
GO:0016272	prefoldin complex

Vocabulary: **Molecular Function**
Term	Definition
GO:0051082	unfolded protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043622	cortical microtubule organization
biological_process	GO:0006094	gluconeogenesis
biological_process	GO:0006096	glycolytic process
biological_process	GO:0006457	protein folding
biological_process	GO:0046686	response to cadmium ion
biological_process	GO:0009651	response to salt stress
cellular_component	GO:0005829	cytosol
cellular_component	GO:0016272	prefoldin complex
molecular_function	GO:0051082	unfolded protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG03G007080.1	ClCG03G007080.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002777	Prefoldin beta-like	PFAM	PF01920	Prefoldin_2	coord: 82..173 score: 2.4
IPR009053	Prefoldin	GENE3D	G3DSA:1.10.287.370		coord: 82..176 score: 1.8
IPR009053	Prefoldin	unknown	SSF46579	Prefoldin	coord: 82..173 score: 1.83
None	No IPR available	unknown	Coil	Coil	coord: 7..27 score: -coord: 140..174 scor
None	No IPR available	PANTHER	PTHR21431	PREFOLDIN SUBUNIT 6	coord: 82..183 score: 7.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG03G007080	Csa1G448940	Cucumber (Chinese Long) v2	cuwcgB036
ClCG03G007080	MELO3C002717	Melon (DHL92) v3.5.1	mewcgB150
ClCG03G007080	Cla019606	Watermelon (97103) v1	wcgwmB223
ClCG03G007080	Cla97C03G058310	Watermelon (97103) v2	wcgwmbB186
ClCG03G007080	Bhi08G001720	Wax gourd	wcgwgoB341
ClCG03G007080	CSPI01G21400	Wild cucumber (PI 183967)	cpiwcgB039
ClCG03G007080	gCucsa.212390.2	Cucumber (Gy14) v1	cgywcgB388
ClCG03G007080	CmaCh13G005560	Cucurbita maxima (Rimu)	cmawcgB195
ClCG03G007080	CmaCh18G004620	Cucurbita maxima (Rimu)	cmawcgB357
ClCG03G007080	CmoCh18G004390	Cucurbita moschata (Rifu)	cmowcgB352
ClCG03G007080	CmoCh13G005880	Cucurbita moschata (Rifu)	cmowcgB185
ClCG03G007080	Lsi02G008680	Bottle gourd (USVL1VR-Ls)	lsiwcgB188
ClCG03G007080	Cp4.1LG09g07810	Cucurbita pepo (Zucchini)	cpewcgB035
ClCG03G007080	Cp4.1LG20g05010	Cucurbita pepo (Zucchini)	cpewcgB468
ClCG03G007080	CsGy1G021110	Cucumber (Gy14) v2	cgybwcgB034
ClCG03G007080	MELO3C002717.2	Melon (DHL92) v3.6.1	medwcgB142
ClCG03G007080	Carg19924	Silver-seed gourd	carwcgB0773
ClCG03G007080	Carg14543	Silver-seed gourd	carwcgB0144
ClCG03G007080	CsaV3_1G032650	Cucumber (Chinese Long) v3	cucwcgB039

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG03G007080	Watermelon (Charleston Gray)	wcgwcgB093
ClCG03G007080	Cucumber (Gy14) v1	cgywcgB027
ClCG03G007080	Cucurbita maxima (Rimu)	cmawcgB583
ClCG03G007080	Cucurbita maxima (Rimu)	cmawcgB759
ClCG03G007080	Cucurbita moschata (Rifu)	cmowcgB582
ClCG03G007080	Cucurbita moschata (Rifu)	cmowcgB760
ClCG03G007080	Wild cucumber (PI 183967)	cpiwcgB486
ClCG03G007080	Cucumber (Chinese Long) v2	cuwcgB462
ClCG03G007080	Melon (DHL92) v3.5.1	mewcgB523
ClCG03G007080	Watermelon (97103) v1	wcgwmB238
ClCG03G007080	Watermelon (97103) v1	wcgwmB245
ClCG03G007080	Cucurbita pepo (Zucchini)	cpewcgB069
ClCG03G007080	Cucurbita pepo (Zucchini)	cpewcgB277
ClCG03G007080	Cucurbita pepo (Zucchini)	cpewcgB431
ClCG03G007080	Bottle gourd (USVL1VR-Ls)	lsiwcgB133
ClCG03G007080	Cucumber (Gy14) v2	cgybwcgB424
ClCG03G007080	Melon (DHL92) v3.6.1	medwcgB518
ClCG03G007080	Silver-seed gourd	carwcgB0532
ClCG03G007080	Silver-seed gourd	carwcgB0932
ClCG03G007080	Cucumber (Chinese Long) v3	cucwcgB483
ClCG03G007080	Watermelon (97103) v2	wcgwmbB174
ClCG03G007080	Watermelon (97103) v2	wcgwmbB183
ClCG03G007080	Wax gourd	wcgwgoB332
ClCG03G007080	Wax gourd	wcgwgoB336