Cp4.1LG09g00920 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG09g00920
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionPentatricopeptide repeat-containing protein, putative
LocationCp4.1LG09 : 531877 .. 533304 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACGCTTTATCGCTTCTGAGTGCGCGGATAGTCTGCAGATTGGTTTCAAATTCTTTCATTGTGCGTCGAACAATTTGGAATCGGAGTTTTGGTAGTGATGACCGATTTGAGTTTGTTATGGAACCCTATAAGAAGGGGTTCGAGAGATCAGAGTCTTGTGAGTTTGAGAGTCTTAGATGCGATGATTTGTCTGTGAGAAGGGGTTTTCTAGAGGATTCGAAAACTGATGCTGGAAAAGTTCTTGAGGTTCTCAAACAGGATGGGCCTGGATTTGACACATTAGTGGCTTTGGATGAACTCCAACTAAAGGTCTCAGGAGTTCTTGTTAGGGAAGTTTTGAGGGGGATTTTGAGAAGCATAAATGTTCTAAACAAAACTCAGTGTGCAAAATTGGGGTACAAGTTCTTCGTGTGGTCTGGTAAGATTGAGAATTTCAACCACACCGCGAGTTCGTATCATATGATCATGAAAATATTTGCTGAATGTGAGGAGTTCAAGGCTATGTGGAGGTTAGTTGATGAGATGACTGAGAAAGGGTACCCTGTTACTGCAAGGACATTCACCTTATTGATATGTACTTGTGGTGATGCAGGCTTGGCTAGGAAAGTTGTCGAGAGGTTTATCAAATCGAAAACGTTCAATTACAGGCCGTTTAAGCACTCGTATAATGCCATTCTCCATGCACTTCTTGGTATAAAACAGTACAAGTTGATTGAATGGGTGTATCAGCAAATGCTGCTTGATGGTCATAGCTCGGACATGCTGACATATAATTTGCTATTGTATGCAAGGTGCAAATTGGGGAAATTGGATCAGTTTCACAGGTTGCTTGATGAAATGGCCAGGAATGGGTTCTCTCCTGATTATCATACTTATAACATTCTTCTCTATGTTCTTGGCAAAGGAGACAAGCCTCTTGCAGCTTTAAACCTTTTGAACCACATGAGGGAAGTGGGCTCTGATCCGAGCATTCTTCACTTCACGACGTTGATAAATGGACTTAGTCGGGCTGGAAATTTGGATGCTTGCAAATATTTTTTTGATGAACTTTCTAATAACGGTTGCACTCCTGATGTCGTTTGCTACACTGTGATGATCACAAGCTATACAGTAGCTGGGGAGCACGAAAAGGCTCGAGAACTTTTCGATGAGATGGTAATAAAGGGCCAACTCCCTAATGTATTTACATACAACTCCATGATTCGTGGGTTTTGTATGGTCGGCGAATTCGAGGAAGCTTATACTATGCTCGAAGAAATGGAATCCCGAGGCTGCAAACCAAATTTTCTTGTATATAGTACCCTTGTAAGTTATTTGCGAAACGCTGGACAGCTTTCCGAGGCTCACAAAGTTATTACACATATGGTCGAGAAGGGGCAATACGCGCATTTAGTGACGAAATTCAAGGGATATAGAAGATGCTAG

mRNA sequence

ATGAACGCTTTATCGCTTCTGAGTGCGCGGATAGTCTGCAGATTGGTTTCAAATTCTTTCATTGTGCGTCGAACAATTTGGAATCGGAGTTTTGGTAGTGATGACCGATTTGAGTTTGTTATGGAACCCTATAAGAAGGGGTTCGAGAGATCAGAGTCTTGTGAGTTTGAGAGTCTTAGATGCGATGATTTGTCTGTGAGAAGGGGTTTTCTAGAGGATTCGAAAACTGATGCTGGAAAAGTTCTTGAGGTTCTCAAACAGGATGGGCCTGGATTTGACACATTAGTGGCTTTGGATGAACTCCAACTAAAGGTCTCAGGAGTTCTTGTTAGGGAAGTTTTGAGGGGGATTTTGAGAAGCATAAATGTTCTAAACAAAACTCAGTGTGCAAAATTGGGGTACAAGTTCTTCGTGTGGTCTGGTAAGATTGAGAATTTCAACCACACCGCGAGTTCGTATCATATGATCATGAAAATATTTGCTGAATGTGAGGAGTTCAAGGCTATGTGGAGGTTAGTTGATGAGATGACTGAGAAAGGGTACCCTGTTACTGCAAGGACATTCACCTTATTGATATGTACTTGTGGTGATGCAGGCTTGGCTAGGAAAGTTGTCGAGAGGTTTATCAAATCGAAAACGTTCAATTACAGGCCGTTTAAGCACTCGTATAATGCCATTCTCCATGCACTTCTTGGTATAAAACAGTACAAGTTGATTGAATGGGTGTATCAGCAAATGCTGCTTGATGGTCATAGCTCGGACATGCTGACATATAATTTGCTATTGTATGCAAGGTGCAAATTGGGGAAATTGGATCAGTTTCACAGGTTGCTTGATGAAATGGCCAGGAATGGGTTCTCTCCTGATTATCATACTTATAACATTCTTCTCTATGTTCTTGGCAAAGGAGACAAGCCTCTTGCAGCTTTAAACCTTTTGAACCACATGAGGGAAGTGGGCTCTGATCCGAGCATTCTTCACTTCACGACGTTGATAAATGGACTTAGTCGGGCTGGAAATTTGGATGCTTGCAAATATTTTTTTGATGAACTTTCTAATAACGGTTGCACTCCTGATGTCGTTTGCTACACTGTGATGATCACAAGCTATACAGTAGCTGGGGAGCACGAAAAGGCTCGAGAACTTTTCGATGAGATGGTAATAAAGGGCCAACTCCCTAATGTATTTACATACAACTCCATGATTCGTGGGTTTTGTATGGTCGGCGAATTCGAGGAAGCTTATACTATGCTCGAAGAAATGGAATCCCGAGGCTGCAAACCAAATTTTCTTGTATATAGTACCCTTGTAAGTTATTTGCGAAACGCTGGACAGCTTTCCGAGGCTCACAAAGTTATTACACATATGGTCGAGAAGGGGCAATACGCGCATTTAGTGACGAAATTCAAGGGATATAGAAGATGCTAG

Coding sequence (CDS)

ATGAACGCTTTATCGCTTCTGAGTGCGCGGATAGTCTGCAGATTGGTTTCAAATTCTTTCATTGTGCGTCGAACAATTTGGAATCGGAGTTTTGGTAGTGATGACCGATTTGAGTTTGTTATGGAACCCTATAAGAAGGGGTTCGAGAGATCAGAGTCTTGTGAGTTTGAGAGTCTTAGATGCGATGATTTGTCTGTGAGAAGGGGTTTTCTAGAGGATTCGAAAACTGATGCTGGAAAAGTTCTTGAGGTTCTCAAACAGGATGGGCCTGGATTTGACACATTAGTGGCTTTGGATGAACTCCAACTAAAGGTCTCAGGAGTTCTTGTTAGGGAAGTTTTGAGGGGGATTTTGAGAAGCATAAATGTTCTAAACAAAACTCAGTGTGCAAAATTGGGGTACAAGTTCTTCGTGTGGTCTGGTAAGATTGAGAATTTCAACCACACCGCGAGTTCGTATCATATGATCATGAAAATATTTGCTGAATGTGAGGAGTTCAAGGCTATGTGGAGGTTAGTTGATGAGATGACTGAGAAAGGGTACCCTGTTACTGCAAGGACATTCACCTTATTGATATGTACTTGTGGTGATGCAGGCTTGGCTAGGAAAGTTGTCGAGAGGTTTATCAAATCGAAAACGTTCAATTACAGGCCGTTTAAGCACTCGTATAATGCCATTCTCCATGCACTTCTTGGTATAAAACAGTACAAGTTGATTGAATGGGTGTATCAGCAAATGCTGCTTGATGGTCATAGCTCGGACATGCTGACATATAATTTGCTATTGTATGCAAGGTGCAAATTGGGGAAATTGGATCAGTTTCACAGGTTGCTTGATGAAATGGCCAGGAATGGGTTCTCTCCTGATTATCATACTTATAACATTCTTCTCTATGTTCTTGGCAAAGGAGACAAGCCTCTTGCAGCTTTAAACCTTTTGAACCACATGAGGGAAGTGGGCTCTGATCCGAGCATTCTTCACTTCACGACGTTGATAAATGGACTTAGTCGGGCTGGAAATTTGGATGCTTGCAAATATTTTTTTGATGAACTTTCTAATAACGGTTGCACTCCTGATGTCGTTTGCTACACTGTGATGATCACAAGCTATACAGTAGCTGGGGAGCACGAAAAGGCTCGAGAACTTTTCGATGAGATGGTAATAAAGGGCCAACTCCCTAATGTATTTACATACAACTCCATGATTCGTGGGTTTTGTATGGTCGGCGAATTCGAGGAAGCTTATACTATGCTCGAAGAAATGGAATCCCGAGGCTGCAAACCAAATTTTCTTGTATATAGTACCCTTGTAAGTTATTTGCGAAACGCTGGACAGCTTTCCGAGGCTCACAAAGTTATTACACATATGGTCGAGAAGGGGCAATACGCGCATTTAGTGACGAAATTCAAGGGATATAGAAGATGCTAG

Protein sequence

MNALSLLSARIVCRLVSNSFIVRRTIWNRSFGSDDRFEFVMEPYKKGFERSESCEFESLRCDDLSVRRGFLEDSKTDAGKVLEVLKQDGPGFDTLVALDELQLKVSGVLVREVLRGILRSINVLNKTQCAKLGYKFFVWSGKIENFNHTASSYHMIMKIFAECEEFKAMWRLVDEMTEKGYPVTARTFTLLICTCGDAGLARKVVERFIKSKTFNYRPFKHSYNAILHALLGIKQYKLIEWVYQQMLLDGHSSDMLTYNLLLYARCKLGKLDQFHRLLDEMARNGFSPDYHTYNILLYVLGKGDKPLAALNLLNHMREVGSDPSILHFTTLINGLSRAGNLDACKYFFDELSNNGCTPDVVCYTVMITSYTVAGEHEKARELFDEMVIKGQLPNVFTYNSMIRGFCMVGEFEEAYTMLEEMESRGCKPNFLVYSTLVSYLRNAGQLSEAHKVITHMVEKGQYAHLVTKFKGYRRC
Homology
[Close]
BLAST of Cp4.1LG09g00920 vs. Swiss-Prot
Match: PPR81_ARATH (Pentatricopeptide repeat-containing protein At1g55630 OS=Arabidopsis thaliana GN=At1g55630 PE=2 SV=1)

HSP 1 Score: 610.9 bits (1574), Expect = 1.2e-173
Identity = 300/476 (63.03%), Postives = 367/476 (77.10%), Query Frame = 1 

Query: 1   MNALSLLSARIVCRLVSNSFIVRRTIWNRSFGSDDRFEFVMEPYKKGFERSE-SCEFESL 60
           MN++   S  +  R  S      R   N S G D       EP K  +E SE  CEF+  
Sbjct: 1   MNSVIHYSTSVAVRKASRFLFTSRKFCNGSIGGDVTDNGTEEPLKITWESSEMDCEFDQE 60

Query: 61  RCDD-LSVRRGFLEDSKTDAGKVLEVLKQDGPGFDTLVALDELQLKVSGVLVREVLRGIL 120
              + +SVR+ F+E +K  A +VL+ L+QD PGF+T  ALDEL + +SG+LVREVL GIL
Sbjct: 61  ENGEKISVRKRFMESTKLSASRVLDTLQQDCPGFNTKSALDELNVSISGLLVREVLVGIL 120

Query: 121 RSINVLNKTQCAKLGYKFFVWSGKIENFNHTASSYHMIMKIFAECEEFKAMWRLVDEMTE 180
           R+++  NKT+CAKL YKFFVW G  ENF HTA+ YH++MKIFAEC E+KAM RL+DEM +
Sbjct: 121 RTLSFDNKTRCAKLAYKFFVWCGGQENFRHTANCYHLLMKIFAECGEYKAMCRLIDEMIK 180

Query: 181 KGYPVTARTFTLLICTCGDAGLARKVVERFIKSKTFNYRPFKHSYNAILHALLGIKQYKL 240
            GYP TA TF LLICTCG+AGLAR VVE+FIKSKTFNYRP+KHSYNAILH+LLG+KQYKL
Sbjct: 181 DGYPTTACTFNLLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKL 240

Query: 241 IEWVYQQMLLDGHSSDMLTYNLLLYARCKLGKLDQFHRLLDEMARNGFSPDYHTYNILLY 300
           I+WVY+QML DG + D+LTYN++++A  +LGK D+ +RLLDEM ++GFSPD +TYNILL+
Sbjct: 241 IDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLH 300

Query: 301 VLGKGDKPLAALNLLNHMREVGSDPSILHFTTLINGLSRAGNLDACKYFFDELSNNGCTP 360
            L  G+KPLAALNLLNHMREVG +P ++HFTTLI+GLSRAG L+ACKYF DE    GCTP
Sbjct: 301 HLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTP 360

Query: 361 DVVCYTVMITSYTVAGEHEKARELFDEMVIKGQLPNVFTYNSMIRGFCMVGEFEEAYTML 420
           DVVCYTVMIT Y   GE EKA E+F EM  KGQLPNVFTYNSMIRGFCM G+F+EA  +L
Sbjct: 361 DVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALL 420

Query: 421 EEMESRGCKPNFLVYSTLVSYLRNAGQLSEAHKVITHMVEKGQYAHLVTKFKGYRR 475
           +EMESRGC PNF+VYSTLV+ L+NAG++ EAH+V+  MVEKG Y HL++K K YRR
Sbjct: 421 KEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKGHYVHLISKLKKYRR 476

[Close]
BLAST of Cp4.1LG09g00920 vs. Swiss-Prot
Match: PP288_ARATH (Pentatricopeptide repeat-containing protein At3g60050 OS=Arabidopsis thaliana GN=At3g60050 PE=2 SV=1)

HSP 1 Score: 598.6 bits (1542), Expect = 6.0e-170
Identity = 298/475 (62.74%), Postives = 367/475 (77.26%), Query Frame = 1 

Query: 1   MNALSLLSARIVCRLVSNSFIVRRTIWNRSFGSDDRFEFVMEPYKKGF-ERSESCEFESL 60
           MN   +L   +V +     FI R+   N +FG ++  +        GF E S   E  S+
Sbjct: 1   MNLALVLGTNVVRKAYRFLFISRK-FCNGNFGGNE-IDNGFPDLDCGFDEDSNISELRSI 60

Query: 61  RCDDLSVRRGFLEDSKTDAGKVLEVLKQDGPGFDTLVALDELQLKVSGVLVREVLRGILR 120
             + +SVR  FLE +   A +VL  L+ D  GF++   LDEL ++VSG+LVREVL GILR
Sbjct: 61  DREVISVRSRFLESANHSASRVLVTLQLDESGFNSKSVLDELNVRVSGLLVREVLVGILR 120

Query: 121 SINVLNKTQCAKLGYKFFVWSGKIENFNHTASSYHMIMKIFAECEEFKAMWRLVDEMTEK 180
           +++  NK +CAKL Y+FF+WSG+ E F HT +SYH++MKIFAEC E+KAMWRLVDEM + 
Sbjct: 121 NLSYDNKARCAKLAYRFFLWSGEQECFRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQD 180

Query: 181 GYPVTARTFTLLICTCGDAGLARKVVERFIKSKTFNYRPFKHSYNAILHALLGIKQYKLI 240
           G+P TARTF LLIC+CG+AGLA++ V +F+KSKTFNYRPFKHSYNAIL++LLG+KQYKLI
Sbjct: 181 GFPTTARTFNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLI 240

Query: 241 EWVYQQMLLDGHSSDMLTYNLLLYARCKLGKLDQFHRLLDEMARNGFSPDYHTYNILLYV 300
           EWVY+QML DG S D+LTYN+LL+   +LGK+D+F RL DEMAR+GFSPD +TYNILL++
Sbjct: 241 EWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHI 300

Query: 301 LGKGDKPLAALNLLNHMREVGSDPSILHFTTLINGLSRAGNLDACKYFFDELSNNGCTPD 360
           LGKG+KPLAAL  LNHM+EVG DPS+LH+TTLI+GLSRAGNL+ACKYF DE+   GC PD
Sbjct: 301 LGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPD 360

Query: 361 VVCYTVMITSYTVAGEHEKARELFDEMVIKGQLPNVFTYNSMIRGFCMVGEFEEAYTMLE 420
           VVCYTVMIT Y V+GE +KA+E+F EM +KGQLPNVFTYNSMIRG CM GEF EA  +L+
Sbjct: 361 VVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLK 420

Query: 421 EMESRGCKPNFLVYSTLVSYLRNAGQLSEAHKVITHMVEKGQYAHLVTKFKGYRR 475
           EMESRGC PNF+VYSTLVSYLR AG+LSEA KVI  MV+KG Y HLV K   YRR
Sbjct: 421 EMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKGHYVHLVPKMMKYRR 473

[Close]
BLAST of Cp4.1LG09g00920 vs. Swiss-Prot
Match: PP236_ARATH (Pentatricopeptide repeat-containing protein At3g16010 OS=Arabidopsis thaliana GN=At3g16010 PE=2 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 2.5e-38
Identity = 110/373 (29.49%), Postives = 179/373 (47.99%), Query Frame = 1 

Query: 91  GFDTLVALDELQLKVSGVLVREVLRGILRSINVLNKTQCAKLGYKFFVWSGKIENFNHTA 150
           G D   AL+ L+LKV   LVR +L  I   INV           +FF W+GK  NF H  
Sbjct: 77  GPDAEKALEVLKLKVDHRLVRSILE-IDVEINVK---------IQFFKWAGKRRNFQHDC 136

Query: 151 SSYHMIMKIFAECEEFKAMWRLVDEMTEKGY-PVTARTFTLLICTCGDAGLARKVVERFI 210
           S+Y  +++   E   +  M+R + E+    Y  V+    + L+   G A +  K +  F 
Sbjct: 137 STYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKMVSKALSVFY 196

Query: 211 KSKTFNYRPFKHSYNAILHALLGIKQYKLIEWVYQQMLLDGHS-SDMLTYNLLLYARCKL 270
           ++K    +P   +YN+++  L+   Q++ +  VY +M  +G    D +TY+ L+ +  KL
Sbjct: 197 QAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKL 256

Query: 271 GKLDQFHRLLDEMARNGFSPDYHTYNILLYVLGKGDKPLAALNLLNHMREVGSDPSILHF 330
           G+ D   RL DEM  N   P    Y  LL +  K  K   AL+L   M+  G  P++  +
Sbjct: 257 GRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTY 316

Query: 331 TTLINGLSRAGNLDACKYFFDELSNNGCTPDVVCYTVMITSYTVAGEHEKARELFDEMVI 390
           T LI GL +AG +D    F+ ++  +G TPDVV    ++      G  E+   +F EM +
Sbjct: 317 TELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGM 376

Query: 391 KGQLPNVFTYNSMIRG-FCMVGEFEEAYTMLEEMESRGCKPNFLVYSTLVSYLRNAGQLS 450
               P V +YN++I+  F       E  +  ++M++    P+   YS L+       ++ 
Sbjct: 377 WRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVE 436

Query: 451 EAHKVITHMVEKG 461
           +A  ++  M EKG
Sbjct: 437 KALLLLEEMDEKG 439

[Close]
BLAST of Cp4.1LG09g00920 vs. Swiss-Prot
Match: PP447_ARATH (Putative pentatricopeptide repeat-containing protein At5g65820 OS=Arabidopsis thaliana GN=At5g65820 PE=3 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 6.0e-37
Identity = 104/391 (26.60%), Postives = 185/391 (47.31%), Query Frame = 1 

Query: 72  EDSKTDAGKVLEVLKQDGPGFDTLVALDELQLKVSGVLVREVLRGILRSINVLNKT-QCA 131
           ++  +D  K   +L++    F + V   EL L  SGV +R    G++    VLN+     
Sbjct: 77  DEFASDVEKSYRILRK----FHSRVPKLELALNESGVELRP---GLIE--RVLNRCGDAG 136

Query: 132 KLGYKFFVWSGKIENFNHTASSYHMIMKIFAECEEFKAMWRLVDEM-TEKGYPVTARTFT 191
            LGY+FFVW+ K   + H+   Y  ++KI ++  +F A+W L++EM  E    +    F 
Sbjct: 137 NLGYRFFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFV 196

Query: 192 LLICTCGDAGLARKVVERFIKSKTFNYRPFKHSYNAILHALLGIKQYKLIEWVYQQMLLD 251
           +L+     A + +K +E   +   F + P ++ +  +L AL      K    +++ M + 
Sbjct: 197 VLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRM- 256

Query: 252 GHSSDMLTYNLLLYARCKLGKLDQFHRLLDEMARNGFSPDYHTYNILLYVLGKGDKPLAA 311
               ++  +  LLY  C++GK+ +   +L +M   GF PD   Y  LL       K   A
Sbjct: 257 RFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADA 316

Query: 312 LNLLNHMREVGSDPSILHFTTLINGLSRAGNLDACKYFFDELSNNGCTPDVVCYTVMITS 371
            +LL  MR  G +P+   +T LI  L +   ++     F E+    C  DVV YT +++ 
Sbjct: 317 YDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSG 376

Query: 372 YTVAGEHEKARELFDEMVIKGQLPNVFTYNSMIRGFCMVGEFEEAYTMLEEMESRGCKPN 431
           +   G+ +K   + D+M+ KG +P+  TY  ++        FEE   ++E+M      P+
Sbjct: 377 FCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPD 436

Query: 432 FLVYSTLVSYLRNAGQLSEAHKVITHMVEKG 461
             +Y+ ++      G++ EA ++   M E G
Sbjct: 437 IGIYNVVIRLACKLGEVKEAVRLWNEMEENG 457

[Close]
BLAST of Cp4.1LG09g00920 vs. Swiss-Prot
Match: PP298_ARATH (Pentatricopeptide repeat-containing protein At4g01400, mitochondrial OS=Arabidopsis thaliana GN=At4g01400 PE=2 SV=2)

HSP 1 Score: 156.0 bits (393), Expect = 1.0e-36
Identity = 101/335 (30.15%), Postives = 159/335 (47.46%), Query Frame = 1 

Query: 132 LGYKFFVWSGKIENFNHTASSYHMIMKIFAECEEFKAMWRLVDEMTEKGYPVTARTFTLL 191
           L  + F ++ +  NF H+ SS+ +++        F  +  ++ +    GYP+T   FT L
Sbjct: 66  LAKEIFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYPLTGEIFTYL 125

Query: 192 ICTCGDAGLARKVVERFIKSKTFNYRPFKHSYNAILHALLGIKQY--KLIEWVYQQMLLD 251
           I    +A L  KV+  F K   FN+ P     N IL  L+  + Y  K  E +++   L 
Sbjct: 126 IKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFE-LFKSSRLH 185

Query: 252 GHSSDMLTYNLLLYARCKLGKLDQFHRLLDEMARNGFSPDYHTYNILLYVLGKGDKPLAA 311
           G   +  +YNLL+ A C    L   ++L  +M      PD  +Y IL+    +  +   A
Sbjct: 186 GVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGA 245

Query: 312 LNLLNHMREVGSDPSILHFTTLINGLSRAGNLDACKYFFDELSNNGCTPDVVCYTVMITS 371
           + LL+ M   G  P  L +TTL+N L R   L         +   GC PD+V Y  MI  
Sbjct: 246 MELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILG 305

Query: 372 YTVAGEHEKARELFDEMVIKGQLPNVFTYNSMIRGFCMVGEFEEAYTMLEEMESRGCKPN 431
           +        AR++ D+M+  G  PN  +Y ++I G C  G F+E    LEEM S+G  P+
Sbjct: 306 FCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPH 365

Query: 432 FLVYSTLVSYLRNAGQLSEAHKVITHMVEKGQYAH 465
           F V + LV    + G++ EA  V+  +++ G+  H
Sbjct: 366 FSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLH 399

[Close]
BLAST of Cp4.1LG09g00920 vs. TrEMBL
Match: A0A0A0L8P4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G182100 PE=4 SV=1)

HSP 1 Score: 797.7 bits (2059), Expect = 7.5e-228
Identity = 381/476 (80.04%), Postives = 431/476 (90.55%), Query Frame = 1 

Query: 1   MNALSLLSARIVCRLVSNSFIVRRTIWNRSFGSDDRFEFVMEPYKKGFE-RSESCEFESL 60
           MN+LSL+S+RIVCRL S SFIVRRTIWNR+F SDDRF+F +EP+    +  S+S E +S 
Sbjct: 1   MNSLSLVSSRIVCRLFSTSFIVRRTIWNRNFCSDDRFQFFVEPFSYLADGNSDSFETDSR 60

Query: 61  RCDDLSVRRGFLEDSKTDAGKVLEVLKQDGPGFDTLVALDELQLKVSGVLVREVLRGILR 120
           R DD S RR FL+D+K DA KV+E+LKQDGPGFDT +ALDELQLKVSGVLV EVL+GIL+
Sbjct: 61  RWDDFSFRRSFLKDAKIDAEKVIEILKQDGPGFDTFLALDELQLKVSGVLVGEVLKGILK 120

Query: 121 SINVLNKTQCAKLGYKFFVWSGKIENFNHTASSYHMIMKIFAECEEFKAMWRLVDEMTEK 180
           S +VLNKTQCAKLGYKFF+WSG+IEN+ HT +SYH+IMKIFAECEEFKAMWR++DEMTEK
Sbjct: 121 SKSVLNKTQCAKLGYKFFIWSGRIENYRHTVNSYHIIMKIFAECEEFKAMWRVLDEMTEK 180

Query: 181 GYPVTARTFTLLICTCGDAGLARKVVERFIKSKTFNYRPFKHSYNAILHALLGIKQYKLI 240
           GYPVTARTF +LICTCG+AGLA++VVERFIKSKTFN+RP+KHSYNAILH L+ +KQYKLI
Sbjct: 181 GYPVTARTFMILICTCGEAGLAKRVVERFIKSKTFNFRPYKHSYNAILHGLVIVKQYKLI 240

Query: 241 EWVYQQMLLDGHSSDMLTYNLLLYARCKLGKLDQFHRLLDEMARNGFSPDYHTYNILLYV 300
            WVY QMLLD HS D+LTYN+LL++ CKLGKLDQFHRLLDEMAR GFSPD+HTYNILLYV
Sbjct: 241 GWVYDQMLLDDHSPDILTYNVLLFSSCKLGKLDQFHRLLDEMARKGFSPDFHTYNILLYV 300

Query: 301 LGKGDKPLAALNLLNHMREVGSDPSILHFTTLINGLSRAGNLDACKYFFDELSNNGCTPD 360
           LGKGDKPLAALNLLNHMREVG  P++LHFTTLINGLSRAGNLDACKYFFDEL NNGC PD
Sbjct: 301 LGKGDKPLAALNLLNHMREVGFGPNVLHFTTLINGLSRAGNLDACKYFFDELGNNGCIPD 360

Query: 361 VVCYTVMITSYTVAGEHEKARELFDEMVIKGQLPNVFTYNSMIRGFCMVGEFEEAYTMLE 420
           VVCYTVMITS+T AG+HEKAR  FDEM++KGQLPNVFTYNSMIRGFCMVG+F+EAY+ML 
Sbjct: 361 VVCYTVMITSFTEAGQHEKARAFFDEMIMKGQLPNVFTYNSMIRGFCMVGKFKEAYSMLS 420

Query: 421 EMESRGCKPNFLVYSTLVSYLRNAGQLSEAHKVITHMVEKGQYAHLVTKFKGYRRC 476
           EMESRGC+PNFLVYSTLVSYLRNAG+L EAHKVI  MVE GQYAHL+TKFKGYRRC
Sbjct: 421 EMESRGCRPNFLVYSTLVSYLRNAGKLGEAHKVIKQMVENGQYAHLMTKFKGYRRC 476

[Close]
BLAST of Cp4.1LG09g00920 vs. TrEMBL
Match: M5XQE6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025794mg PE=4 SV=1)

HSP 1 Score: 672.2 bits (1733), Expect = 4.8e-190
Identity = 313/427 (73.30%), Postives = 376/427 (88.06%), Query Frame = 1 

Query: 49  ERSESCEFESLRCDDLSVRRGFLEDSKTDAGKVLEVLKQDGPGFDTLVALDELQLKVSGV 108
           E+    E+E+   +  S+RR F E++K    +VLEVL+QDGPGFDT  ALDEL ++VSG+
Sbjct: 20  EKQNVPEYENRPREYFSLRRSFFENAKIHTRRVLEVLQQDGPGFDTKAALDELHIEVSGL 79

Query: 109 LVREVLRGILRSINVLNKTQCAKLGYKFFVWSGKIENFNHTASSYHMIMKIFAECEEFKA 168
           LVREVL  IL+ +N  +K +CAKLGYKFFVWSG++EN+ HTA++YH++MKIFA+CEEFKA
Sbjct: 80  LVREVLFKILKQVNYASKMRCAKLGYKFFVWSGQLENYRHTANTYHLMMKIFADCEEFKA 139

Query: 169 MWRLVDEMTEKGYPVTARTFTLLICTCGDAGLARKVVERFIKSKTFNYRPFKHSYNAILH 228
           MWRLVDEM EKGYP TA+TF +LICTCG+AGLA+KVVERFIKSKTFNYRPFKHSYNAILH
Sbjct: 140 MWRLVDEMIEKGYPTTAQTFNILICTCGEAGLAKKVVERFIKSKTFNYRPFKHSYNAILH 199

Query: 229 ALLGIKQYKLIEWVYQQMLLDGHSSDMLTYNLLLYARCKLGKLDQFHRLLDEMARNGFSP 288
           +L+ +KQYKLIEWVYQQML DGH +D+LTYN+++YA+ +LGKLDQFHRLL+EM R+GF+P
Sbjct: 200 SLVVVKQYKLIEWVYQQMLADGHCTDILTYNVMMYAKYRLGKLDQFHRLLEEMGRSGFAP 259

Query: 289 DYHTYNILLYVLGKGDKPLAALNLLNHMREVGSDPSILHFTTLINGLSRAGNLDACKYFF 348
           D HTYNILL+VLGKGDKPLAALNLLNHM+EVG DPS+LHFTTLI+GLSR+GNLDACKYFF
Sbjct: 260 DLHTYNILLHVLGKGDKPLAALNLLNHMKEVGLDPSVLHFTTLIDGLSRSGNLDACKYFF 319

Query: 349 DELSNNGCTPDVVCYTVMITSYTVAGEHEKARELFDEMVIKGQLPNVFTYNSMIRGFCMV 408
           DE+  + C PDVVCYTVMI+ Y VAGE EKA+ +FDEM+  GQLPNVFTYN+MIRG CM 
Sbjct: 320 DEMIKHECFPDVVCYTVMISGYIVAGELEKAQGVFDEMIPNGQLPNVFTYNAMIRGLCMA 379

Query: 409 GEFEEAYTMLEEMESRGCKPNFLVYSTLVSYLRNAGQLSEAHKVITHMVEKGQYAHLVTK 468
           G+FEEA +ML++MESRGC PNF VYSTLVSYLRNAG+L++AH+VITHMVEKGQY HL++K
Sbjct: 380 GKFEEACSMLKDMESRGCNPNFTVYSTLVSYLRNAGKLAKAHEVITHMVEKGQYTHLLSK 439

Query: 469 FKGYRRC 476
           FKGYRRC
Sbjct: 440 FKGYRRC 446

[Close]
BLAST of Cp4.1LG09g00920 vs. TrEMBL
Match: W9S7I4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_015785 PE=4 SV=1)

HSP 1 Score: 669.8 bits (1727), Expect = 2.4e-189
Identity = 324/478 (67.78%), Postives = 388/478 (81.17%), Query Frame = 1 

Query: 11  IVCRLVSNSFIVRRTIWNRSF---GSDDRFEFVMEPYKKGFERS-------ESCEFESLR 70
           +V ++  +S +V R   NRSF     ++ ++   EP K+ ++ S       E  +F S  
Sbjct: 21  VVSKVTLSSLVVIRNFCNRSFDGVNGENGYDCFEEPLKRMWKSSYFDSDMDEQSDFYSRE 80

Query: 71  CD---DLSVRRGFLEDSKTDAGKVLEVLKQDGPGFDTLVALDELQLKVSGVLVREVLRGI 130
                + SVR+ F E ++ DAG+VLEVL+QDGPGFD   ALDEL ++VSG+LVR+VL GI
Sbjct: 81  MPARGNFSVRQSFFETARIDAGRVLEVLQQDGPGFDAKPALDELNIRVSGLLVRKVLLGI 140

Query: 131 LRSINVLNKTQCAKLGYKFFVWSGKIENFNHTASSYHMIMKIFAECEEFKAMWRLVDEMT 190
           L +I+  NK +CAKLG+KFF WSG+  N+ HTA+SYH+++KIFAECEEFKAMWRLVDEM 
Sbjct: 141 LSNISHTNKIRCAKLGFKFFTWSGQQGNYRHTANSYHLLIKIFAECEEFKAMWRLVDEMI 200

Query: 191 EKGYPVTARTFTLLICTCGDAGLARKVVERFIKSKTFNYRPFKHSYNAILHALLGIKQYK 250
           E+G+P TART  +LICTCG+AGLARKVVERFIKSKTFN+RPFKHSYNAILH LL   QYK
Sbjct: 201 ERGFPTTARTLNILICTCGEAGLARKVVERFIKSKTFNFRPFKHSYNAILHCLLVTNQYK 260

Query: 251 LIEWVYQQMLLDGHSSDMLTYNLLLYARCKLGKLDQFHRLLDEMARNGFSPDYHTYNILL 310
           LIEWVYQQML DG S D+LTYN+L+  + +LGKLDQFHRLLDEM R GFSPD HTYNILL
Sbjct: 261 LIEWVYQQMLADGFSPDILTYNVLMLTKYRLGKLDQFHRLLDEMGRRGFSPDLHTYNILL 320

Query: 311 YVLGKGDKPLAALNLLNHMREVGSDPSILHFTTLINGLSRAGNLDACKYFFDELSNNGCT 370
           +VLGKGDKPLAALNLLNHM+E G DP +LHFTTLI+GLSRAGNLDAC++FFDE+  NGC 
Sbjct: 321 HVLGKGDKPLAALNLLNHMKETGIDPGVLHFTTLIDGLSRAGNLDACRFFFDEMPKNGCI 380

Query: 371 PDVVCYTVMITSYTVAGEHEKARELFDEMVIKGQLPNVFTYNSMIRGFCMVGEFEEAYTM 430
           PDVVCYTVMIT Y VAGE EKA+ +FDEM+ KGQ+PNVFTYNSMIRG CM G+FEEA +M
Sbjct: 381 PDVVCYTVMITGYVVAGELEKAQSIFDEMITKGQIPNVFTYNSMIRGLCMAGKFEEACSM 440

Query: 431 LEEMESRGCKPNFLVYSTLVSYLRNAGQLSEAHKVITHMVEKGQYAHLVTKFKGYRRC 476
           L++MESRGC PNFLVY+TLVS LRNAG+LSEAH+V+ HMVEKGQY HL++KFKGYRRC
Sbjct: 441 LKDMESRGCNPNFLVYTTLVSNLRNAGKLSEAHQVVKHMVEKGQYVHLLSKFKGYRRC 498

[Close]
BLAST of Cp4.1LG09g00920 vs. TrEMBL
Match: V4S4A4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10004849mg PE=4 SV=1)

HSP 1 Score: 667.2 bits (1720), Expect = 1.5e-188
Identity = 312/411 (75.91%), Postives = 367/411 (89.29%), Query Frame = 1 

Query: 65  SVRRGFLEDSKTDAGKVLEVLKQDGPGFDTLVALDELQLKVSGVLVREVLRGILRSINVL 124
           S+RR FL++ K DA +VLE+L+ DGPGFD  + L E  ++VS +LVREVL GILRS+N  
Sbjct: 77  SIRRMFLDNVKFDASRVLEILQNDGPGFDAKLVLSESGIRVSEILVREVLSGILRSVNYA 136

Query: 125 NKTQCAKLGYKFFVWSGKIENFNHTASSYHMIMKIFAECEEFKAMWRLVDEMTEKGYPVT 184
           +KT+CAKLGYKFFVWSG+ ENF HTA+SYH+IMKIFA+CEEFKAMWRLVDEM E G+P T
Sbjct: 137 DKTKCAKLGYKFFVWSGQQENFRHTANSYHLIMKIFADCEEFKAMWRLVDEMIENGFPTT 196

Query: 185 ARTFTLLICTCGDAGLARKVVERFIKSKTFNYRPFKHSYNAILHALLGIKQYKLIEWVYQ 244
           ARTF +LICTCG+ GLARKVVERFIKSK FN+RPFK+SYNAILHALLGI+QYKLIEWVYQ
Sbjct: 197 ARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQ 256

Query: 245 QMLLDGHSSDMLTYNLLLYARCKLGKLDQFHRLLDEMARNGFSPDYHTYNILLYVLGKGD 304
           QM  +G++ D+LTYN+++ A+ +LGKLDQFHRLLDEM R+GFSPD+HTYNILL+VLGKGD
Sbjct: 257 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 316

Query: 305 KPLAALNLLNHMREVGSDPSILHFTTLINGLSRAGNLDACKYFFDELSNNGCTPDVVCYT 364
           KPLAALNLLNHM+EVG DPS+LHFTTL++GLSRAGNLDACKYFFDE++N GC PDVVCYT
Sbjct: 317 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 376

Query: 365 VMITSYTVAGEHEKARELFDEMVIKGQLPNVFTYNSMIRGFCMVGEFEEAYTMLEEMESR 424
           VMITSY  AGE EKA++LFD M+ KGQLPNVFTYNSMIRGFCM G+F+EA TM++EMESR
Sbjct: 377 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 436

Query: 425 GCKPNFLVYSTLVSYLRNAGQLSEAHKVITHMVEKGQYAHLVTKFKGYRRC 476
           GC PNFLVY+TLVS LRNAG+L+EAH+VI HMVEKG+Y HLV+KFK Y+RC
Sbjct: 437 GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKFKRYKRC 487

[Close]
BLAST of Cp4.1LG09g00920 vs. TrEMBL
Match: A0A059DJY2_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A02787 PE=4 SV=1)

HSP 1 Score: 660.2 bits (1702), Expect = 1.9e-186
Identity = 327/487 (67.15%), Postives = 387/487 (79.47%), Query Frame = 1 

Query: 1   MNALSLLSARIVCRLVSNSFIVRRTIWNRSFGSD---DRFEFVMEPYKKGFERSES---- 60
           MN+ +L   RIV + +S+  I  RT+ +R F      + FE V EP KK +         
Sbjct: 1   MNSRALFGPRIVHK-ISHLLISCRTLCDRGFRGGKIKEGFECVEEPLKKMWVNDSDGFMD 60

Query: 61  -----CEFESLRCDDLSVRRGFLEDSKTDAGKVLEVLKQDGPGFDTLVALDELQLKVSGV 120
                 E+ES   +  S R+ F  +++  A KVL VL+QDGPGFD   +L+EL+++VSG+
Sbjct: 61  DARILSEYESSDEEYYSTRQNFCANARVGAEKVLRVLQQDGPGFDVKTSLEELRVRVSGL 120

Query: 121 LVREVLRGILRSINVLNKTQCAKLGYKFFVWSGKIENFNHTASSYHMIMKIFAECEEFKA 180
           LVREVL GILRS    NK++C KLGYKFFVWSG  EN+ HT  +YH +MKIFAEC+EFKA
Sbjct: 121 LVREVLLGILRSTEFANKSRCVKLGYKFFVWSGMQENYRHTTDAYHSMMKIFAECDEFKA 180

Query: 181 MWRLVDEMTEKGYPVTARTFTLLICTCGDAGLARKVVERFIKSKTFNYRPFKHSYNAILH 240
           MWRLVDEM EKG  +TARTF +LICTCG+ GLAR+VVERFIKSK FNYRPFKHSYNAILH
Sbjct: 181 MWRLVDEMIEKGLFMTARTFNILICTCGEVGLARRVVERFIKSKAFNYRPFKHSYNAILH 240

Query: 241 ALLGIKQYKLIEWVYQQMLLDGHSSDMLTYNLLLYARCKLGKLDQFHRLLDEMARNGFSP 300
           +L+ +KQYKLIEWVYQQML DG S D+LTYN+L+ A+ +LGKLDQFHRLLDEM R GFSP
Sbjct: 241 SLVALKQYKLIEWVYQQMLADGLSPDILTYNILMCAKYRLGKLDQFHRLLDEMGRRGFSP 300

Query: 301 DYHTYNILLYVLGKGDKPLAALNLLNHMREVGSDPSILHFTTLINGLSRAGNLDACKYFF 360
           D+HTYN+LL+VLGKGDKPLAAL+LLNHMREVG DPS+LHFTTL++GLSRAGNLDACKYFF
Sbjct: 301 DFHTYNLLLHVLGKGDKPLAALSLLNHMREVGIDPSVLHFTTLMDGLSRAGNLDACKYFF 360

Query: 361 DELSNNGCTPDVVCYTVMITSYTVAGEHEKARELFDEMVIKGQLPNVFTYNSMIRGFCMV 420
           DE+  N C PDVVCYTV+IT Y VAGE EKA E+F++M+I GQLPNVFTYNSMIRG+CM 
Sbjct: 361 DEMIKNNCKPDVVCYTVLITGYVVAGELEKAIEMFNKMMIDGQLPNVFTYNSMIRGYCMA 420

Query: 421 GEFEEAYTMLEEMESRGCKPNFLVYSTLVSYLRNAGQLSEAHKVITHMVEKGQYAHLVTK 476
           G F EA +ML EME+RGC PNFLVYSTLVSYLRNAG+LS+AH VI  MVEKGQY HLV+K
Sbjct: 421 GNFAEACSMLNEMEARGCNPNFLVYSTLVSYLRNAGKLSQAHSVIRRMVEKGQYVHLVSK 480

[Close]
BLAST of Cp4.1LG09g00920 vs. TAIR10
Match: AT1G55630.1 (AT1G55630.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 610.9 bits (1574), Expect = 6.6e-175
Identity = 300/476 (63.03%), Postives = 367/476 (77.10%), Query Frame = 1 

Query: 1   MNALSLLSARIVCRLVSNSFIVRRTIWNRSFGSDDRFEFVMEPYKKGFERSE-SCEFESL 60
           MN++   S  +  R  S      R   N S G D       EP K  +E SE  CEF+  
Sbjct: 1   MNSVIHYSTSVAVRKASRFLFTSRKFCNGSIGGDVTDNGTEEPLKITWESSEMDCEFDQE 60

Query: 61  RCDD-LSVRRGFLEDSKTDAGKVLEVLKQDGPGFDTLVALDELQLKVSGVLVREVLRGIL 120
              + +SVR+ F+E +K  A +VL+ L+QD PGF+T  ALDEL + +SG+LVREVL GIL
Sbjct: 61  ENGEKISVRKRFMESTKLSASRVLDTLQQDCPGFNTKSALDELNVSISGLLVREVLVGIL 120

Query: 121 RSINVLNKTQCAKLGYKFFVWSGKIENFNHTASSYHMIMKIFAECEEFKAMWRLVDEMTE 180
           R+++  NKT+CAKL YKFFVW G  ENF HTA+ YH++MKIFAEC E+KAM RL+DEM +
Sbjct: 121 RTLSFDNKTRCAKLAYKFFVWCGGQENFRHTANCYHLLMKIFAECGEYKAMCRLIDEMIK 180

Query: 181 KGYPVTARTFTLLICTCGDAGLARKVVERFIKSKTFNYRPFKHSYNAILHALLGIKQYKL 240
            GYP TA TF LLICTCG+AGLAR VVE+FIKSKTFNYRP+KHSYNAILH+LLG+KQYKL
Sbjct: 181 DGYPTTACTFNLLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKL 240

Query: 241 IEWVYQQMLLDGHSSDMLTYNLLLYARCKLGKLDQFHRLLDEMARNGFSPDYHTYNILLY 300
           I+WVY+QML DG + D+LTYN++++A  +LGK D+ +RLLDEM ++GFSPD +TYNILL+
Sbjct: 241 IDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLH 300

Query: 301 VLGKGDKPLAALNLLNHMREVGSDPSILHFTTLINGLSRAGNLDACKYFFDELSNNGCTP 360
            L  G+KPLAALNLLNHMREVG +P ++HFTTLI+GLSRAG L+ACKYF DE    GCTP
Sbjct: 301 HLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTP 360

Query: 361 DVVCYTVMITSYTVAGEHEKARELFDEMVIKGQLPNVFTYNSMIRGFCMVGEFEEAYTML 420
           DVVCYTVMIT Y   GE EKA E+F EM  KGQLPNVFTYNSMIRGFCM G+F+EA  +L
Sbjct: 361 DVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALL 420

Query: 421 EEMESRGCKPNFLVYSTLVSYLRNAGQLSEAHKVITHMVEKGQYAHLVTKFKGYRR 475
           +EMESRGC PNF+VYSTLV+ L+NAG++ EAH+V+  MVEKG Y HL++K K YRR
Sbjct: 421 KEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKGHYVHLISKLKKYRR 476

[Close]
BLAST of Cp4.1LG09g00920 vs. TAIR10
Match: AT3G60050.1 (AT3G60050.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 598.6 bits (1542), Expect = 3.4e-171
Identity = 298/475 (62.74%), Postives = 367/475 (77.26%), Query Frame = 1 

Query: 1   MNALSLLSARIVCRLVSNSFIVRRTIWNRSFGSDDRFEFVMEPYKKGF-ERSESCEFESL 60
           MN   +L   +V +     FI R+   N +FG ++  +        GF E S   E  S+
Sbjct: 1   MNLALVLGTNVVRKAYRFLFISRK-FCNGNFGGNE-IDNGFPDLDCGFDEDSNISELRSI 60

Query: 61  RCDDLSVRRGFLEDSKTDAGKVLEVLKQDGPGFDTLVALDELQLKVSGVLVREVLRGILR 120
             + +SVR  FLE +   A +VL  L+ D  GF++   LDEL ++VSG+LVREVL GILR
Sbjct: 61  DREVISVRSRFLESANHSASRVLVTLQLDESGFNSKSVLDELNVRVSGLLVREVLVGILR 120

Query: 121 SINVLNKTQCAKLGYKFFVWSGKIENFNHTASSYHMIMKIFAECEEFKAMWRLVDEMTEK 180
           +++  NK +CAKL Y+FF+WSG+ E F HT +SYH++MKIFAEC E+KAMWRLVDEM + 
Sbjct: 121 NLSYDNKARCAKLAYRFFLWSGEQECFRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQD 180

Query: 181 GYPVTARTFTLLICTCGDAGLARKVVERFIKSKTFNYRPFKHSYNAILHALLGIKQYKLI 240
           G+P TARTF LLIC+CG+AGLA++ V +F+KSKTFNYRPFKHSYNAIL++LLG+KQYKLI
Sbjct: 181 GFPTTARTFNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLI 240

Query: 241 EWVYQQMLLDGHSSDMLTYNLLLYARCKLGKLDQFHRLLDEMARNGFSPDYHTYNILLYV 300
           EWVY+QML DG S D+LTYN+LL+   +LGK+D+F RL DEMAR+GFSPD +TYNILL++
Sbjct: 241 EWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHI 300

Query: 301 LGKGDKPLAALNLLNHMREVGSDPSILHFTTLINGLSRAGNLDACKYFFDELSNNGCTPD 360
           LGKG+KPLAAL  LNHM+EVG DPS+LH+TTLI+GLSRAGNL+ACKYF DE+   GC PD
Sbjct: 301 LGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPD 360

Query: 361 VVCYTVMITSYTVAGEHEKARELFDEMVIKGQLPNVFTYNSMIRGFCMVGEFEEAYTMLE 420
           VVCYTVMIT Y V+GE +KA+E+F EM +KGQLPNVFTYNSMIRG CM GEF EA  +L+
Sbjct: 361 VVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLK 420

Query: 421 EMESRGCKPNFLVYSTLVSYLRNAGQLSEAHKVITHMVEKGQYAHLVTKFKGYRR 475
           EMESRGC PNF+VYSTLVSYLR AG+LSEA KVI  MV+KG Y HLV K   YRR
Sbjct: 421 EMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKGHYVHLVPKMMKYRR 473

[Close]
BLAST of Cp4.1LG09g00920 vs. TAIR10
Match: AT3G60040.1 (AT3G60040.1 F-box family protein)

HSP 1 Score: 169.9 bits (429), Expect = 3.9e-42
Identity = 85/153 (55.56%), Postives = 104/153 (67.97%), Query Frame = 1 

Query: 322 DPSILHFTTLINGLSRAGNLDACKYFFDELSNNGCTPDVVCYTVMITSYTVAGEHEKARE 381
           D + L    L++ L +     A     + +   G  P V+ YT +I  Y V+GE +KA+E
Sbjct: 686 DGTQLLLIILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKE 745

Query: 382 LFDEMVIKGQLPNVFTYNSMIRGFCMVGEFEEAYTMLEEMESRGCKPNFLVYSTLVSYLR 441
           +F EM +KGQLPNVFTYNSMIRG CM GEF EA  +L+EMESRGC PNF+VYSTLV YLR
Sbjct: 746 MFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLR 805

Query: 442 NAGQLSEAHKVITHMVEKGQYAHLVTKFKGYRR 475
            AG+LSEA KVI  MV+KG Y HLV+K   YRR
Sbjct: 806 KAGKLSEARKVIKEMVKKGHYVHLVSKMMKYRR 838

[Close]
BLAST of Cp4.1LG09g00920 vs. TAIR10
Match: AT3G16010.1 (AT3G16010.1 Pentatricopeptide repeat (PPR-like) superfamily protein)

HSP 1 Score: 161.4 bits (407), Expect = 1.4e-39
Identity = 110/373 (29.49%), Postives = 179/373 (47.99%), Query Frame = 1 

Query: 91  GFDTLVALDELQLKVSGVLVREVLRGILRSINVLNKTQCAKLGYKFFVWSGKIENFNHTA 150
           G D   AL+ L+LKV   LVR +L  I   INV           +FF W+GK  NF H  
Sbjct: 77  GPDAEKALEVLKLKVDHRLVRSILE-IDVEINVK---------IQFFKWAGKRRNFQHDC 136

Query: 151 SSYHMIMKIFAECEEFKAMWRLVDEMTEKGY-PVTARTFTLLICTCGDAGLARKVVERFI 210
           S+Y  +++   E   +  M+R + E+    Y  V+    + L+   G A +  K +  F 
Sbjct: 137 STYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKMVSKALSVFY 196

Query: 211 KSKTFNYRPFKHSYNAILHALLGIKQYKLIEWVYQQMLLDGHS-SDMLTYNLLLYARCKL 270
           ++K    +P   +YN+++  L+   Q++ +  VY +M  +G    D +TY+ L+ +  KL
Sbjct: 197 QAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKL 256

Query: 271 GKLDQFHRLLDEMARNGFSPDYHTYNILLYVLGKGDKPLAALNLLNHMREVGSDPSILHF 330
           G+ D   RL DEM  N   P    Y  LL +  K  K   AL+L   M+  G  P++  +
Sbjct: 257 GRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTY 316

Query: 331 TTLINGLSRAGNLDACKYFFDELSNNGCTPDVVCYTVMITSYTVAGEHEKARELFDEMVI 390
           T LI GL +AG +D    F+ ++  +G TPDVV    ++      G  E+   +F EM +
Sbjct: 317 TELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGM 376

Query: 391 KGQLPNVFTYNSMIRG-FCMVGEFEEAYTMLEEMESRGCKPNFLVYSTLVSYLRNAGQLS 450
               P V +YN++I+  F       E  +  ++M++    P+   YS L+       ++ 
Sbjct: 377 WRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVE 436

Query: 451 EAHKVITHMVEKG 461
           +A  ++  M EKG
Sbjct: 437 KALLLLEEMDEKG 439

[Close]
BLAST of Cp4.1LG09g00920 vs. TAIR10
Match: AT5G65820.1 (AT5G65820.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 156.8 bits (395), Expect = 3.4e-38
Identity = 104/391 (26.60%), Postives = 185/391 (47.31%), Query Frame = 1 

Query: 72  EDSKTDAGKVLEVLKQDGPGFDTLVALDELQLKVSGVLVREVLRGILRSINVLNKT-QCA 131
           ++  +D  K   +L++    F + V   EL L  SGV +R    G++    VLN+     
Sbjct: 77  DEFASDVEKSYRILRK----FHSRVPKLELALNESGVELRP---GLIE--RVLNRCGDAG 136

Query: 132 KLGYKFFVWSGKIENFNHTASSYHMIMKIFAECEEFKAMWRLVDEM-TEKGYPVTARTFT 191
            LGY+FFVW+ K   + H+   Y  ++KI ++  +F A+W L++EM  E    +    F 
Sbjct: 137 NLGYRFFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFV 196

Query: 192 LLICTCGDAGLARKVVERFIKSKTFNYRPFKHSYNAILHALLGIKQYKLIEWVYQQMLLD 251
           +L+     A + +K +E   +   F + P ++ +  +L AL      K    +++ M + 
Sbjct: 197 VLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRM- 256

Query: 252 GHSSDMLTYNLLLYARCKLGKLDQFHRLLDEMARNGFSPDYHTYNILLYVLGKGDKPLAA 311
               ++  +  LLY  C++GK+ +   +L +M   GF PD   Y  LL       K   A
Sbjct: 257 RFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADA 316

Query: 312 LNLLNHMREVGSDPSILHFTTLINGLSRAGNLDACKYFFDELSNNGCTPDVVCYTVMITS 371
            +LL  MR  G +P+   +T LI  L +   ++     F E+    C  DVV YT +++ 
Sbjct: 317 YDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSG 376

Query: 372 YTVAGEHEKARELFDEMVIKGQLPNVFTYNSMIRGFCMVGEFEEAYTMLEEMESRGCKPN 431
           +   G+ +K   + D+M+ KG +P+  TY  ++        FEE   ++E+M      P+
Sbjct: 377 FCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPD 436

Query: 432 FLVYSTLVSYLRNAGQLSEAHKVITHMVEKG 461
             +Y+ ++      G++ EA ++   M E G
Sbjct: 437 IGIYNVVIRLACKLGEVKEAVRLWNEMEENG 457

[Close]
BLAST of Cp4.1LG09g00920 vs. NCBI nr
Match: gi|659077478|ref|XP_008439226.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g55630-like [Cucumis melo])

HSP 1 Score: 810.1 bits (2091), Expect = 2.1e-231
Identity = 388/476 (81.51%), Postives = 435/476 (91.39%), Query Frame = 1 

Query: 1   MNALSLLSARIVCRLVSNSFIVRRTIWNRSFGSDDRFEFVMEPYKKGFE-RSESCEFESL 60
           MN+LSL+S+RIVCRL S SFIVRRTIWNRSF SDDRF+FV+EP+    +  S+S E +S 
Sbjct: 1   MNSLSLVSSRIVCRLFSTSFIVRRTIWNRSFCSDDRFQFVVEPFSYFADGNSDSFETDSR 60

Query: 61  RCDDLSVRRGFLEDSKTDAGKVLEVLKQDGPGFDTLVALDELQLKVSGVLVREVLRGILR 120
           R DD S+RR FL+D+K DA KV+E+LKQDGPGFDT +ALDEL+L+VSGVLV EVL+GIL+
Sbjct: 61  RWDDFSLRRSFLKDAKIDAEKVIEILKQDGPGFDTFLALDELKLQVSGVLVGEVLKGILK 120

Query: 121 SINVLNKTQCAKLGYKFFVWSGKIENFNHTASSYHMIMKIFAECEEFKAMWRLVDEMTEK 180
           S +VLNKTQCAKLGYKFFVWS +IEN+ HT  SYHMIMKIFAECEEFKAMWRL+DEMTEK
Sbjct: 121 STSVLNKTQCAKLGYKFFVWSSRIENYRHTVKSYHMIMKIFAECEEFKAMWRLLDEMTEK 180

Query: 181 GYPVTARTFTLLICTCGDAGLARKVVERFIKSKTFNYRPFKHSYNAILHALLGIKQYKLI 240
           GYPVTARTF +LICTCGDAGLA+KVVERFIKSKTFN+RP+KHSYNAILH L+ +KQYKLI
Sbjct: 181 GYPVTARTFMILICTCGDAGLAKKVVERFIKSKTFNFRPYKHSYNAILHGLVVVKQYKLI 240

Query: 241 EWVYQQMLLDGHSSDMLTYNLLLYARCKLGKLDQFHRLLDEMARNGFSPDYHTYNILLYV 300
           EWVY+QMLLDGH  D+LTYN+LL++RCKLGKLDQFHRLLDEMAR GFSPD+HTYNILLYV
Sbjct: 241 EWVYEQMLLDGHGPDILTYNVLLFSRCKLGKLDQFHRLLDEMARKGFSPDFHTYNILLYV 300

Query: 301 LGKGDKPLAALNLLNHMREVGSDPSILHFTTLINGLSRAGNLDACKYFFDELSNNGCTPD 360
           LGKGDKPLAALNLLNHMREVG  P+ILHFTTLINGLSRAGNLDACKYFFDEL N+ C PD
Sbjct: 301 LGKGDKPLAALNLLNHMREVGFGPNILHFTTLINGLSRAGNLDACKYFFDELGNHDCIPD 360

Query: 361 VVCYTVMITSYTVAGEHEKARELFDEMVIKGQLPNVFTYNSMIRGFCMVGEFEEAYTMLE 420
           VVCYTVMITSYT AG+HEKAR  FDEM++KGQLPNVFTYNSMIRGFCMVG+F+EAY+ML 
Sbjct: 361 VVCYTVMITSYTEAGQHEKARAFFDEMIMKGQLPNVFTYNSMIRGFCMVGKFKEAYSMLS 420

Query: 421 EMESRGCKPNFLVYSTLVSYLRNAGQLSEAHKVITHMVEKGQYAHLVTKFKGYRRC 476
           EMESRGC+PNFLVYSTLVSYLRNAG+L+EAHKVIT MVE GQYAHL+TKFKGYRRC
Sbjct: 421 EMESRGCRPNFLVYSTLVSYLRNAGKLAEAHKVITRMVENGQYAHLMTKFKGYRRC 476

[Close]
BLAST of Cp4.1LG09g00920 vs. NCBI nr
Match: gi|449446161|ref|XP_004140840.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g55630-like [Cucumis sativus])

HSP 1 Score: 797.7 bits (2059), Expect = 1.1e-227
Identity = 381/476 (80.04%), Postives = 431/476 (90.55%), Query Frame = 1 

Query: 1   MNALSLLSARIVCRLVSNSFIVRRTIWNRSFGSDDRFEFVMEPYKKGFE-RSESCEFESL 60
           MN+LSL+S+RIVCRL S SFIVRRTIWNR+F SDDRF+F +EP+    +  S+S E +S 
Sbjct: 1   MNSLSLVSSRIVCRLFSTSFIVRRTIWNRNFCSDDRFQFFVEPFSYLADGNSDSFETDSR 60

Query: 61  RCDDLSVRRGFLEDSKTDAGKVLEVLKQDGPGFDTLVALDELQLKVSGVLVREVLRGILR 120
           R DD S RR FL+D+K DA KV+E+LKQDGPGFDT +ALDELQLKVSGVLV EVL+GIL+
Sbjct: 61  RWDDFSFRRSFLKDAKIDAEKVIEILKQDGPGFDTFLALDELQLKVSGVLVGEVLKGILK 120

Query: 121 SINVLNKTQCAKLGYKFFVWSGKIENFNHTASSYHMIMKIFAECEEFKAMWRLVDEMTEK 180
           S +VLNKTQCAKLGYKFF+WSG+IEN+ HT +SYH+IMKIFAECEEFKAMWR++DEMTEK
Sbjct: 121 SKSVLNKTQCAKLGYKFFIWSGRIENYRHTVNSYHIIMKIFAECEEFKAMWRVLDEMTEK 180

Query: 181 GYPVTARTFTLLICTCGDAGLARKVVERFIKSKTFNYRPFKHSYNAILHALLGIKQYKLI 240
           GYPVTARTF +LICTCG+AGLA++VVERFIKSKTFN+RP+KHSYNAILH L+ +KQYKLI
Sbjct: 181 GYPVTARTFMILICTCGEAGLAKRVVERFIKSKTFNFRPYKHSYNAILHGLVIVKQYKLI 240

Query: 241 EWVYQQMLLDGHSSDMLTYNLLLYARCKLGKLDQFHRLLDEMARNGFSPDYHTYNILLYV 300
            WVY QMLLD HS D+LTYN+LL++ CKLGKLDQFHRLLDEMAR GFSPD+HTYNILLYV
Sbjct: 241 GWVYDQMLLDDHSPDILTYNVLLFSSCKLGKLDQFHRLLDEMARKGFSPDFHTYNILLYV 300

Query: 301 LGKGDKPLAALNLLNHMREVGSDPSILHFTTLINGLSRAGNLDACKYFFDELSNNGCTPD 360
           LGKGDKPLAALNLLNHMREVG  P++LHFTTLINGLSRAGNLDACKYFFDEL NNGC PD
Sbjct: 301 LGKGDKPLAALNLLNHMREVGFGPNVLHFTTLINGLSRAGNLDACKYFFDELGNNGCIPD 360

Query: 361 VVCYTVMITSYTVAGEHEKARELFDEMVIKGQLPNVFTYNSMIRGFCMVGEFEEAYTMLE 420
           VVCYTVMITS+T AG+HEKAR  FDEM++KGQLPNVFTYNSMIRGFCMVG+F+EAY+ML 
Sbjct: 361 VVCYTVMITSFTEAGQHEKARAFFDEMIMKGQLPNVFTYNSMIRGFCMVGKFKEAYSMLS 420

Query: 421 EMESRGCKPNFLVYSTLVSYLRNAGQLSEAHKVITHMVEKGQYAHLVTKFKGYRRC 476
           EMESRGC+PNFLVYSTLVSYLRNAG+L EAHKVI  MVE GQYAHL+TKFKGYRRC
Sbjct: 421 EMESRGCRPNFLVYSTLVSYLRNAGKLGEAHKVIKQMVENGQYAHLMTKFKGYRRC 476

[Close]
BLAST of Cp4.1LG09g00920 vs. NCBI nr
Match: gi|645257085|ref|XP_008234250.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g60050-like [Prunus mume])

HSP 1 Score: 683.3 bits (1762), Expect = 3.0e-193
Identity = 329/488 (67.42%), Postives = 405/488 (82.99%), Query Frame = 1 

Query: 1   MNALSLLSARIVCRLVSNSFIVRRTIWNRSFGS---DDRFEFVMEPYKKGF--------- 60
           MN +SL   R++ + +S  F+V R + +  FG    D+  EF+ EP K+ +         
Sbjct: 1   MNCISLFGPRVIQK-ISCYFVVARKLSDGCFGGNKGDNGHEFIEEPLKRIWRSSDFDSVL 60

Query: 61  -ERSESCEFESLRCDDLSVRRGFLEDSKTDAGKVLEVLKQDGPGFDTLVALDELQLKVSG 120
            E+    E+E+   +  S+RR F E++K    +VLEVL+QDGPGFDT  ALDEL ++VSG
Sbjct: 61  DEKQNVHEYENRPREYFSLRRSFFENAKIHTRRVLEVLQQDGPGFDTKAALDELHIEVSG 120

Query: 121 VLVREVLRGILRSINVLNKTQCAKLGYKFFVWSGKIENFNHTASSYHMIMKIFAECEEFK 180
           +LVREVL  IL+ +N  +K +CAKLGYKFFVWSG++EN+ HTA++YH++MKIFA+CEEFK
Sbjct: 121 LLVREVLFNILKQVNYASKMRCAKLGYKFFVWSGQLENYRHTANTYHLMMKIFADCEEFK 180

Query: 181 AMWRLVDEMTEKGYPVTARTFTLLICTCGDAGLARKVVERFIKSKTFNYRPFKHSYNAIL 240
           AMWRLVDEM EKGYP TA+TF++LI TCG+AGLA+KVVERFIKSKTFNYRPFKHSYNAIL
Sbjct: 181 AMWRLVDEMIEKGYPTTAQTFSILIRTCGEAGLAKKVVERFIKSKTFNYRPFKHSYNAIL 240

Query: 241 HALLGIKQYKLIEWVYQQMLLDGHSSDMLTYNLLLYARCKLGKLDQFHRLLDEMARNGFS 300
           H+L+ +KQYKLIEWVYQQML DGH +D+LTYN+++YA+ +LGKLDQFHRLL+EM R+GF+
Sbjct: 241 HSLVVVKQYKLIEWVYQQMLADGHCTDILTYNVMMYAKYRLGKLDQFHRLLEEMGRSGFA 300

Query: 301 PDYHTYNILLYVLGKGDKPLAALNLLNHMREVGSDPSILHFTTLINGLSRAGNLDACKYF 360
           PD+HTYNILL+VLGKGDKPLAALNLLNHM+EVG DPS+LHFTTLI+GLSRAGNLDACKYF
Sbjct: 301 PDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLIDGLSRAGNLDACKYF 360

Query: 361 FDELSNNGCTPDVVCYTVMITSYTVAGEHEKARELFDEMVIKGQLPNVFTYNSMIRGFCM 420
           FDE+  + C PDVVCYTVMI+ Y VAGE EKA+ +FDEM+  GQLPNVFTYN+MIRG CM
Sbjct: 361 FDEMIKHECFPDVVCYTVMISGYIVAGELEKAQGVFDEMIPNGQLPNVFTYNAMIRGLCM 420

Query: 421 VGEFEEAYTMLEEMESRGCKPNFLVYSTLVSYLRNAGQLSEAHKVITHMVEKGQYAHLVT 476
            G+FEEA +ML++MESRGC PNF VYSTLVSYLRNAG+ ++AH+VITHMVEKGQY HL++
Sbjct: 421 AGKFEEACSMLKDMESRGCNPNFTVYSTLVSYLRNAGKRAKAHEVITHMVEKGQYTHLLS 480

[Close]
BLAST of Cp4.1LG09g00920 vs. NCBI nr
Match: gi|596041207|ref|XP_007220061.1| (hypothetical protein PRUPE_ppa025794mg [Prunus persica])

HSP 1 Score: 672.2 bits (1733), Expect = 6.8e-190
Identity = 313/427 (73.30%), Postives = 376/427 (88.06%), Query Frame = 1 

Query: 49  ERSESCEFESLRCDDLSVRRGFLEDSKTDAGKVLEVLKQDGPGFDTLVALDELQLKVSGV 108
           E+    E+E+   +  S+RR F E++K    +VLEVL+QDGPGFDT  ALDEL ++VSG+
Sbjct: 20  EKQNVPEYENRPREYFSLRRSFFENAKIHTRRVLEVLQQDGPGFDTKAALDELHIEVSGL 79

Query: 109 LVREVLRGILRSINVLNKTQCAKLGYKFFVWSGKIENFNHTASSYHMIMKIFAECEEFKA 168
           LVREVL  IL+ +N  +K +CAKLGYKFFVWSG++EN+ HTA++YH++MKIFA+CEEFKA
Sbjct: 80  LVREVLFKILKQVNYASKMRCAKLGYKFFVWSGQLENYRHTANTYHLMMKIFADCEEFKA 139

Query: 169 MWRLVDEMTEKGYPVTARTFTLLICTCGDAGLARKVVERFIKSKTFNYRPFKHSYNAILH 228
           MWRLVDEM EKGYP TA+TF +LICTCG+AGLA+KVVERFIKSKTFNYRPFKHSYNAILH
Sbjct: 140 MWRLVDEMIEKGYPTTAQTFNILICTCGEAGLAKKVVERFIKSKTFNYRPFKHSYNAILH 199

Query: 229 ALLGIKQYKLIEWVYQQMLLDGHSSDMLTYNLLLYARCKLGKLDQFHRLLDEMARNGFSP 288
           +L+ +KQYKLIEWVYQQML DGH +D+LTYN+++YA+ +LGKLDQFHRLL+EM R+GF+P
Sbjct: 200 SLVVVKQYKLIEWVYQQMLADGHCTDILTYNVMMYAKYRLGKLDQFHRLLEEMGRSGFAP 259

Query: 289 DYHTYNILLYVLGKGDKPLAALNLLNHMREVGSDPSILHFTTLINGLSRAGNLDACKYFF 348
           D HTYNILL+VLGKGDKPLAALNLLNHM+EVG DPS+LHFTTLI+GLSR+GNLDACKYFF
Sbjct: 260 DLHTYNILLHVLGKGDKPLAALNLLNHMKEVGLDPSVLHFTTLIDGLSRSGNLDACKYFF 319

Query: 349 DELSNNGCTPDVVCYTVMITSYTVAGEHEKARELFDEMVIKGQLPNVFTYNSMIRGFCMV 408
           DE+  + C PDVVCYTVMI+ Y VAGE EKA+ +FDEM+  GQLPNVFTYN+MIRG CM 
Sbjct: 320 DEMIKHECFPDVVCYTVMISGYIVAGELEKAQGVFDEMIPNGQLPNVFTYNAMIRGLCMA 379

Query: 409 GEFEEAYTMLEEMESRGCKPNFLVYSTLVSYLRNAGQLSEAHKVITHMVEKGQYAHLVTK 468
           G+FEEA +ML++MESRGC PNF VYSTLVSYLRNAG+L++AH+VITHMVEKGQY HL++K
Sbjct: 380 GKFEEACSMLKDMESRGCNPNFTVYSTLVSYLRNAGKLAKAHEVITHMVEKGQYTHLLSK 439

Query: 469 FKGYRRC 476
           FKGYRRC
Sbjct: 440 FKGYRRC 446

[Close]
BLAST of Cp4.1LG09g00920 vs. NCBI nr
Match: gi|703141203|ref|XP_010107444.1| (hypothetical protein L484_015785 [Morus notabilis])

HSP 1 Score: 669.8 bits (1727), Expect = 3.4e-189
Identity = 324/478 (67.78%), Postives = 388/478 (81.17%), Query Frame = 1 

Query: 11  IVCRLVSNSFIVRRTIWNRSF---GSDDRFEFVMEPYKKGFERS-------ESCEFESLR 70
           +V ++  +S +V R   NRSF     ++ ++   EP K+ ++ S       E  +F S  
Sbjct: 21  VVSKVTLSSLVVIRNFCNRSFDGVNGENGYDCFEEPLKRMWKSSYFDSDMDEQSDFYSRE 80

Query: 71  CD---DLSVRRGFLEDSKTDAGKVLEVLKQDGPGFDTLVALDELQLKVSGVLVREVLRGI 130
                + SVR+ F E ++ DAG+VLEVL+QDGPGFD   ALDEL ++VSG+LVR+VL GI
Sbjct: 81  MPARGNFSVRQSFFETARIDAGRVLEVLQQDGPGFDAKPALDELNIRVSGLLVRKVLLGI 140

Query: 131 LRSINVLNKTQCAKLGYKFFVWSGKIENFNHTASSYHMIMKIFAECEEFKAMWRLVDEMT 190
           L +I+  NK +CAKLG+KFF WSG+  N+ HTA+SYH+++KIFAECEEFKAMWRLVDEM 
Sbjct: 141 LSNISHTNKIRCAKLGFKFFTWSGQQGNYRHTANSYHLLIKIFAECEEFKAMWRLVDEMI 200

Query: 191 EKGYPVTARTFTLLICTCGDAGLARKVVERFIKSKTFNYRPFKHSYNAILHALLGIKQYK 250
           E+G+P TART  +LICTCG+AGLARKVVERFIKSKTFN+RPFKHSYNAILH LL   QYK
Sbjct: 201 ERGFPTTARTLNILICTCGEAGLARKVVERFIKSKTFNFRPFKHSYNAILHCLLVTNQYK 260

Query: 251 LIEWVYQQMLLDGHSSDMLTYNLLLYARCKLGKLDQFHRLLDEMARNGFSPDYHTYNILL 310
           LIEWVYQQML DG S D+LTYN+L+  + +LGKLDQFHRLLDEM R GFSPD HTYNILL
Sbjct: 261 LIEWVYQQMLADGFSPDILTYNVLMLTKYRLGKLDQFHRLLDEMGRRGFSPDLHTYNILL 320

Query: 311 YVLGKGDKPLAALNLLNHMREVGSDPSILHFTTLINGLSRAGNLDACKYFFDELSNNGCT 370
           +VLGKGDKPLAALNLLNHM+E G DP +LHFTTLI+GLSRAGNLDAC++FFDE+  NGC 
Sbjct: 321 HVLGKGDKPLAALNLLNHMKETGIDPGVLHFTTLIDGLSRAGNLDACRFFFDEMPKNGCI 380

Query: 371 PDVVCYTVMITSYTVAGEHEKARELFDEMVIKGQLPNVFTYNSMIRGFCMVGEFEEAYTM 430
           PDVVCYTVMIT Y VAGE EKA+ +FDEM+ KGQ+PNVFTYNSMIRG CM G+FEEA +M
Sbjct: 381 PDVVCYTVMITGYVVAGELEKAQSIFDEMITKGQIPNVFTYNSMIRGLCMAGKFEEACSM 440

Query: 431 LEEMESRGCKPNFLVYSTLVSYLRNAGQLSEAHKVITHMVEKGQYAHLVTKFKGYRRC 476
           L++MESRGC PNFLVY+TLVS LRNAG+LSEAH+V+ HMVEKGQY HL++KFKGYRRC
Sbjct: 441 LKDMESRGCNPNFLVYTTLVSNLRNAGKLSEAHQVVKHMVEKGQYVHLLSKFKGYRRC 498

The following BLAST results are available for this feature:
BLAST of Cp4.1LG09g00920 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PPR81_ARATH1.2e-17363.03Pentatricopeptide repeat-containing protein At1g55630 OS=Arabidopsis thaliana GN... [more]
PP288_ARATH6.0e-17062.74Pentatricopeptide repeat-containing protein At3g60050 OS=Arabidopsis thaliana GN... [more]
PP236_ARATH2.5e-3829.49Pentatricopeptide repeat-containing protein At3g16010 OS=Arabidopsis thaliana GN... [more]
PP447_ARATH6.0e-3726.60Putative pentatricopeptide repeat-containing protein At5g65820 OS=Arabidopsis th... [more]
PP298_ARATH1.0e-3630.15Pentatricopeptide repeat-containing protein At4g01400, mitochondrial OS=Arabidop... [more]
BLAST of Cp4.1LG09g00920 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L8P4_CUCSA7.5e-22880.04Uncharacterized protein OS=Cucumis sativus GN=Csa_3G182100 PE=4 SV=1[more]
M5XQE6_PRUPE4.8e-19073.30Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025794mg PE=4 SV=1[more]
W9S7I4_9ROSA2.4e-18967.78Uncharacterized protein OS=Morus notabilis GN=L484_015785 PE=4 SV=1[more]
V4S4A4_9ROSI1.5e-18875.91Uncharacterized protein OS=Citrus clementina GN=CICLE_v10004849mg PE=4 SV=1[more]
A0A059DJY2_EUCGR1.9e-18667.15Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A02787 PE=4 SV=1[more]
BLAST of Cp4.1LG09g00920 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G55630.16.6e-17563.03 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT3G60050.13.4e-17162.74 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT3G60040.13.9e-4255.56 F-box family protein[more]
AT3G16010.11.4e-3929.49 Pentatricopeptide repeat (PPR-like) superfamily protein[more]
AT5G65820.13.4e-3826.60 Pentatricopeptide repeat (PPR) superfamily protein[more]
BLAST of Cp4.1LG09g00920 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659077478|ref|XP_008439226.1|2.1e-23181.51PREDICTED: pentatricopeptide repeat-containing protein At1g55630-like [Cucumis m... [more]
gi|449446161|ref|XP_004140840.1|1.1e-22780.04PREDICTED: pentatricopeptide repeat-containing protein At1g55630-like [Cucumis s... [more]
gi|645257085|ref|XP_008234250.1|3.0e-19367.42PREDICTED: pentatricopeptide repeat-containing protein At3g60050-like [Prunus mu... [more]
gi|596041207|ref|XP_007220061.1|6.8e-19073.30hypothetical protein PRUPE_ppa025794mg [Prunus persica][more]
gi|703141203|ref|XP_010107444.1|3.4e-18967.78hypothetical protein L484_015785 [Morus notabilis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG09g00920.1Cp4.1LG09g00920.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 328..356
score: 2.
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 254..300
score: 3.3E-10coord: 358..406
score: 1.7
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 417..460
score: 0
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 152..184
score: 0.0029coord: 328..360
score: 5.7E-8coord: 361..394
score: 3.2E-7coord: 291..324
score: 2.6E-4coord: 396..429
score: 1.2E-12coord: 257..289
score: 3.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 219..253
score: 6.697coord: 429..463
score: 8.583coord: 149..183
score: 8.791coord: 394..428
score: 14.754coord: 359..393
score: 11.498coord: 184..218
score: 6.621coord: 289..323
score: 9.46coord: 254..288
score: 11.794coord: 324..358
score: 10
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 223..291
score: 6.7E-5coord: 362..458
score: 6.
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 124..463
score: 2.6E-211coord: 81..100
score: 2.6E
NoneNo IPR availablePANTHERPTHR24015:SF361SUBFAMILY NOT NAMEDcoord: 124..463
score: 2.6E-211coord: 81..100
score: 2.6E
NoneNo IPR availableunknownSSF81901HCP-likecoord: 223..423
score: 2.8

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG09g00920Cucsa.107790Cucumber (Gy14) v1cgycpeB0240
Cp4.1LG09g00920CmaCh16G001270Cucurbita maxima (Rimu)cmacpeB339
Cp4.1LG09g00920CmaCh18G012460Cucurbita maxima (Rimu)cmacpeB415
Cp4.1LG09g00920CmoCh18G012690Cucurbita moschata (Rifu)cmocpeB376
Cp4.1LG09g00920CmoCh16G001340Cucurbita moschata (Rifu)cmocpeB303
Cp4.1LG09g00920Cla006179Watermelon (97103) v1cpewmB032
Cp4.1LG09g00920Csa3G182100Cucumber (Chinese Long) v2cpecuB039
Cp4.1LG09g00920CSPI03G16930Wild cucumber (PI 183967)cpecpiB034
Cp4.1LG09g00920Lsi05G012270Bottle gourd (USVL1VR-Ls)cpelsiB035
Cp4.1LG09g00920CsaV3_3G017100Cucumber (Chinese Long) v3cpecucB0039
Cp4.1LG09g00920Bhi01G000962Wax gourdcpewgoB0025
Cp4.1LG09g00920CsGy3G017010Cucumber (Gy14) v2cgybcpeB287
Cp4.1LG09g00920Carg22100Silver-seed gourdcarcpeB1038
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG09g00920Cp4.1LG14g06120Cucurbita pepo (Zucchini)cpecpeB023
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG09g00920Cucurbita pepo (Zucchini)cpecpeB052
Cp4.1LG09g00920Cucurbita pepo (Zucchini)cpecpeB057
Cp4.1LG09g00920Cucumber (Gy14) v1cgycpeB0788
Cp4.1LG09g00920Cucurbita maxima (Rimu)cmacpeB253
Cp4.1LG09g00920Cucurbita maxima (Rimu)cmacpeB598
Cp4.1LG09g00920Cucurbita moschata (Rifu)cmocpeB546
Cp4.1LG09g00920Wild cucumber (PI 183967)cpecpiB040
Cp4.1LG09g00920Cucumber (Chinese Long) v2cpecuB038
Cp4.1LG09g00920Cucumber (Chinese Long) v2cpecuB046
Cp4.1LG09g00920Bottle gourd (USVL1VR-Ls)cpelsiB039
Cp4.1LG09g00920Watermelon (Charleston Gray)cpewcgB023
Cp4.1LG09g00920Watermelon (Charleston Gray)cpewcgB044
Cp4.1LG09g00920Watermelon (Charleston Gray)cpewcgB046
Cp4.1LG09g00920Watermelon (97103) v1cpewmB036
Cp4.1LG09g00920Melon (DHL92) v3.5.1cpemeB020
Cp4.1LG09g00920Melon (DHL92) v3.5.1cpemeB043
Cp4.1LG09g00920Cucumber (Gy14) v2cgybcpeB584
Cp4.1LG09g00920Melon (DHL92) v3.6.1cpemedB049
Cp4.1LG09g00920Melon (DHL92) v3.6.1cpemedB050
Cp4.1LG09g00920Silver-seed gourdcarcpeB0994
Cp4.1LG09g00920Silver-seed gourdcarcpeB1373
Cp4.1LG09g00920Cucumber (Chinese Long) v3cpecucB0045