CmaCh18G012460 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh18G012460
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionPentatricopeptide repeat-containing protein, putative
LocationCma_Chr18 : 9734075 .. 9735502 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACGCTTTATCGCTTCTGAGTACGCGGATAGTCTGGAGATTGGTTTCAAATTCTTTCATTGTGCGTCGAACAATTTGGAATCGGAGTTTTGGTAGTGATGACCGATTTGAGTTTGTTATGGAACCCTATAAGAAGGGGTTGGAGAGATCAGAGTCTTGTGAGTTTGAGAGTCTTAGATACGATGATTTGTCTGTGAGAAGGGGTTTTCTAGAGGATTCGAAAACTGATGCTGGAAAAGTTCTTGAGGTTCTCAAACAGGATGGTCCTGGATTTGACACATTAGTGGCTTTGGATGAACTCCAACTAAAGGTCTCAGGAGTTCTTGTTAGGGAAGTTTTGAGGGGGATTTTGAGAAGCATAAATGTTCTAGACAAAACTCAGTGTGCAAAATTGGGGTACAAGTTCTTCGTGTGGTCTGGTAAGGTTGAGAATTTCAACCACACCGCTAGTTCGTATCATTTGATCATGAAAATATTTGCTGAATGCGAGGAGTTCAAGGCTATGTGGAGGTTAGTTGATGAAATGACTGAGAAAGGGTACCCTGTTACTGCAAGGACATTTACGTTATTGATATGTACTTGTGGTGATGCAGGGTTGGCTAGGAAAGTTGTCGAGAGGTTTATCAAATCGAAAACGTTCAATTACAGGCCGTTTAAGCACTCTTACAATGCCATTCTCCATGCACTTCTTGGTATAAAACAGTACAAGTTGATTGAATGGGTGTATCAGCAAATGCTGCTTGATGGTCATAGCTCGGACATGCTGACATATAATTTGCTATTGTATGCAAGGTGCAAATTGGGGAAATTGGATCAGTTTCACAGGTTGCTTGATGAAATGGCCAGGAATGGGTTCTCTCCTGATTATCATACTTATAACATTCTTCTCTATGTTCTTGGCAAAGGAGACAAGCCTCTTGCCGCTTTAAACCTTTTGAACCACATGAGGGAAGTAGGCTCTGATCCGAGCATTCTTCACTTCACGACGTTGATAAATGGACTTAGTCGGGCTGGAAATTTGGAGGCTTGCAAATATTTTTTTGATGAACTTTCTAATAACGGCTGCACTCCTGATGTCGTTTGCTACACTGTGATGATCACAAGCTATACAGTAGCTGGGGAGCATGAAAAGGCTCGAGAACTTTTCGATGAGATGGTAATAAAGGGCCAACTCCCTAATGTATTTACATACAACTCCATGATTCGTGGGTTTTGTATGGTCGGTGAATTCGAGGAAGCTTACACTATGCTCAAAGAAATGGAATCCCGAGGCTGCAAACCAAATTTTCTTGTATATAGTACCCTTGTAAGTTATTTGCGAAACGCTGGACAGCTTTCCGAGGCTCACAAAGTTATTACACATATGGTCGAGAAGGGGCAATACGCGCATTTAGTGACGAAATTCAAGGGATATAGAAGATGCTAG

mRNA sequence

ATGAACGCTTTATCGCTTCTGAGTACGCGGATAGTCTGGAGATTGGTTTCAAATTCTTTCATTGTGCGTCGAACAATTTGGAATCGGAGTTTTGGTAGTGATGACCGATTTGAGTTTGTTATGGAACCCTATAAGAAGGGGTTGGAGAGATCAGAGTCTTGTGAGTTTGAGAGTCTTAGATACGATGATTTGTCTGTGAGAAGGGGTTTTCTAGAGGATTCGAAAACTGATGCTGGAAAAGTTCTTGAGGTTCTCAAACAGGATGGTCCTGGATTTGACACATTAGTGGCTTTGGATGAACTCCAACTAAAGGTCTCAGGAGTTCTTGTTAGGGAAGTTTTGAGGGGGATTTTGAGAAGCATAAATGTTCTAGACAAAACTCAGTGTGCAAAATTGGGGTACAAGTTCTTCGTGTGGTCTGGTAAGGTTGAGAATTTCAACCACACCGCTAGTTCGTATCATTTGATCATGAAAATATTTGCTGAATGCGAGGAGTTCAAGGCTATGTGGAGGTTAGTTGATGAAATGACTGAGAAAGGGTACCCTGTTACTGCAAGGACATTTACGTTATTGATATGTACTTGTGGTGATGCAGGGTTGGCTAGGAAAGTTGTCGAGAGGTTTATCAAATCGAAAACGTTCAATTACAGGCCGTTTAAGCACTCTTACAATGCCATTCTCCATGCACTTCTTGGTATAAAACAGTACAAGTTGATTGAATGGGTGTATCAGCAAATGCTGCTTGATGGTCATAGCTCGGACATGCTGACATATAATTTGCTATTGTATGCAAGGTGCAAATTGGGGAAATTGGATCAGTTTCACAGGTTGCTTGATGAAATGGCCAGGAATGGGTTCTCTCCTGATTATCATACTTATAACATTCTTCTCTATGTTCTTGGCAAAGGAGACAAGCCTCTTGCCGCTTTAAACCTTTTGAACCACATGAGGGAAGTAGGCTCTGATCCGAGCATTCTTCACTTCACGACGTTGATAAATGGACTTAGTCGGGCTGGAAATTTGGAGGCTTGCAAATATTTTTTTGATGAACTTTCTAATAACGGCTGCACTCCTGATGTCGTTTGCTACACTGTGATGATCACAAGCTATACAGTAGCTGGGGAGCATGAAAAGGCTCGAGAACTTTTCGATGAGATGGTAATAAAGGGCCAACTCCCTAATGTATTTACATACAACTCCATGATTCGTGGGTTTTGTATGGTCGGTGAATTCGAGGAAGCTTACACTATGCTCAAAGAAATGGAATCCCGAGGCTGCAAACCAAATTTTCTTGTATATAGTACCCTTGTAAGTTATTTGCGAAACGCTGGACAGCTTTCCGAGGCTCACAAAGTTATTACACATATGGTCGAGAAGGGGCAATACGCGCATTTAGTGACGAAATTCAAGGGATATAGAAGATGCTAG

Coding sequence (CDS)

ATGAACGCTTTATCGCTTCTGAGTACGCGGATAGTCTGGAGATTGGTTTCAAATTCTTTCATTGTGCGTCGAACAATTTGGAATCGGAGTTTTGGTAGTGATGACCGATTTGAGTTTGTTATGGAACCCTATAAGAAGGGGTTGGAGAGATCAGAGTCTTGTGAGTTTGAGAGTCTTAGATACGATGATTTGTCTGTGAGAAGGGGTTTTCTAGAGGATTCGAAAACTGATGCTGGAAAAGTTCTTGAGGTTCTCAAACAGGATGGTCCTGGATTTGACACATTAGTGGCTTTGGATGAACTCCAACTAAAGGTCTCAGGAGTTCTTGTTAGGGAAGTTTTGAGGGGGATTTTGAGAAGCATAAATGTTCTAGACAAAACTCAGTGTGCAAAATTGGGGTACAAGTTCTTCGTGTGGTCTGGTAAGGTTGAGAATTTCAACCACACCGCTAGTTCGTATCATTTGATCATGAAAATATTTGCTGAATGCGAGGAGTTCAAGGCTATGTGGAGGTTAGTTGATGAAATGACTGAGAAAGGGTACCCTGTTACTGCAAGGACATTTACGTTATTGATATGTACTTGTGGTGATGCAGGGTTGGCTAGGAAAGTTGTCGAGAGGTTTATCAAATCGAAAACGTTCAATTACAGGCCGTTTAAGCACTCTTACAATGCCATTCTCCATGCACTTCTTGGTATAAAACAGTACAAGTTGATTGAATGGGTGTATCAGCAAATGCTGCTTGATGGTCATAGCTCGGACATGCTGACATATAATTTGCTATTGTATGCAAGGTGCAAATTGGGGAAATTGGATCAGTTTCACAGGTTGCTTGATGAAATGGCCAGGAATGGGTTCTCTCCTGATTATCATACTTATAACATTCTTCTCTATGTTCTTGGCAAAGGAGACAAGCCTCTTGCCGCTTTAAACCTTTTGAACCACATGAGGGAAGTAGGCTCTGATCCGAGCATTCTTCACTTCACGACGTTGATAAATGGACTTAGTCGGGCTGGAAATTTGGAGGCTTGCAAATATTTTTTTGATGAACTTTCTAATAACGGCTGCACTCCTGATGTCGTTTGCTACACTGTGATGATCACAAGCTATACAGTAGCTGGGGAGCATGAAAAGGCTCGAGAACTTTTCGATGAGATGGTAATAAAGGGCCAACTCCCTAATGTATTTACATACAACTCCATGATTCGTGGGTTTTGTATGGTCGGTGAATTCGAGGAAGCTTACACTATGCTCAAAGAAATGGAATCCCGAGGCTGCAAACCAAATTTTCTTGTATATAGTACCCTTGTAAGTTATTTGCGAAACGCTGGACAGCTTTCCGAGGCTCACAAAGTTATTACACATATGGTCGAGAAGGGGCAATACGCGCATTTAGTGACGAAATTCAAGGGATATAGAAGATGCTAG

Protein sequence

MNALSLLSTRIVWRLVSNSFIVRRTIWNRSFGSDDRFEFVMEPYKKGLERSESCEFESLRYDDLSVRRGFLEDSKTDAGKVLEVLKQDGPGFDTLVALDELQLKVSGVLVREVLRGILRSINVLDKTQCAKLGYKFFVWSGKVENFNHTASSYHLIMKIFAECEEFKAMWRLVDEMTEKGYPVTARTFTLLICTCGDAGLARKVVERFIKSKTFNYRPFKHSYNAILHALLGIKQYKLIEWVYQQMLLDGHSSDMLTYNLLLYARCKLGKLDQFHRLLDEMARNGFSPDYHTYNILLYVLGKGDKPLAALNLLNHMREVGSDPSILHFTTLINGLSRAGNLEACKYFFDELSNNGCTPDVVCYTVMITSYTVAGEHEKARELFDEMVIKGQLPNVFTYNSMIRGFCMVGEFEEAYTMLKEMESRGCKPNFLVYSTLVSYLRNAGQLSEAHKVITHMVEKGQYAHLVTKFKGYRRC
Homology
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BLAST of CmaCh18G012460 vs. Swiss-Prot
Match: PPR81_ARATH (Pentatricopeptide repeat-containing protein At1g55630 OS=Arabidopsis thaliana GN=At1g55630 PE=2 SV=1)

HSP 1 Score: 614.4 bits (1583), Expect = 1.1e-174
Identity = 303/476 (63.66%), Postives = 367/476 (77.10%), Query Frame = 1 

Query: 1   MNALSLLSTRIVWRLVSNSFIVRRTIWNRSFGSDDRFEFVMEPYKKGLERSE-SCEFESL 60
           MN++   ST +  R  S      R   N S G D       EP K   E SE  CEF+  
Sbjct: 1   MNSVIHYSTSVAVRKASRFLFTSRKFCNGSIGGDVTDNGTEEPLKITWESSEMDCEFDQE 60

Query: 61  RYDD-LSVRRGFLEDSKTDAGKVLEVLKQDGPGFDTLVALDELQLKVSGVLVREVLRGIL 120
              + +SVR+ F+E +K  A +VL+ L+QD PGF+T  ALDEL + +SG+LVREVL GIL
Sbjct: 61  ENGEKISVRKRFMESTKLSASRVLDTLQQDCPGFNTKSALDELNVSISGLLVREVLVGIL 120

Query: 121 RSINVLDKTQCAKLGYKFFVWSGKVENFNHTASSYHLIMKIFAECEEFKAMWRLVDEMTE 180
           R+++  +KT+CAKL YKFFVW G  ENF HTA+ YHL+MKIFAEC E+KAM RL+DEM +
Sbjct: 121 RTLSFDNKTRCAKLAYKFFVWCGGQENFRHTANCYHLLMKIFAECGEYKAMCRLIDEMIK 180

Query: 181 KGYPVTARTFTLLICTCGDAGLARKVVERFIKSKTFNYRPFKHSYNAILHALLGIKQYKL 240
            GYP TA TF LLICTCG+AGLAR VVE+FIKSKTFNYRP+KHSYNAILH+LLG+KQYKL
Sbjct: 181 DGYPTTACTFNLLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKL 240

Query: 241 IEWVYQQMLLDGHSSDMLTYNLLLYARCKLGKLDQFHRLLDEMARNGFSPDYHTYNILLY 300
           I+WVY+QML DG + D+LTYN++++A  +LGK D+ +RLLDEM ++GFSPD +TYNILL+
Sbjct: 241 IDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLH 300

Query: 301 VLGKGDKPLAALNLLNHMREVGSDPSILHFTTLINGLSRAGNLEACKYFFDELSNNGCTP 360
            L  G+KPLAALNLLNHMREVG +P ++HFTTLI+GLSRAG LEACKYF DE    GCTP
Sbjct: 301 HLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTP 360

Query: 361 DVVCYTVMITSYTVAGEHEKARELFDEMVIKGQLPNVFTYNSMIRGFCMVGEFEEAYTML 420
           DVVCYTVMIT Y   GE EKA E+F EM  KGQLPNVFTYNSMIRGFCM G+F+EA  +L
Sbjct: 361 DVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALL 420

Query: 421 KEMESRGCKPNFLVYSTLVSYLRNAGQLSEAHKVITHMVEKGQYAHLVTKFKGYRR 475
           KEMESRGC PNF+VYSTLV+ L+NAG++ EAH+V+  MVEKG Y HL++K K YRR
Sbjct: 421 KEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKGHYVHLISKLKKYRR 476

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BLAST of CmaCh18G012460 vs. Swiss-Prot
Match: PP288_ARATH (Pentatricopeptide repeat-containing protein At3g60050 OS=Arabidopsis thaliana GN=At3g60050 PE=2 SV=1)

HSP 1 Score: 602.4 bits (1552), Expect = 4.2e-171
Identity = 299/474 (63.08%), Postives = 366/474 (77.22%), Query Frame = 1 

Query: 1   MNALSLLSTRIVWRLVSNSFIVRRTIWNRSFGSDDRFEFVMEPYKKGLERSESCEFESLR 60
           MN   +L T +V +     FI R+   N +FG ++      +      E S   E  S+ 
Sbjct: 1   MNLALVLGTNVVRKAYRFLFISRK-FCNGNFGGNEIDNGFPDLDCGFDEDSNISELRSID 60

Query: 61  YDDLSVRRGFLEDSKTDAGKVLEVLKQDGPGFDTLVALDELQLKVSGVLVREVLRGILRS 120
            + +SVR  FLE +   A +VL  L+ D  GF++   LDEL ++VSG+LVREVL GILR+
Sbjct: 61  REVISVRSRFLESANHSASRVLVTLQLDESGFNSKSVLDELNVRVSGLLVREVLVGILRN 120

Query: 121 INVLDKTQCAKLGYKFFVWSGKVENFNHTASSYHLIMKIFAECEEFKAMWRLVDEMTEKG 180
           ++  +K +CAKL Y+FF+WSG+ E F HT +SYHL+MKIFAEC E+KAMWRLVDEM + G
Sbjct: 121 LSYDNKARCAKLAYRFFLWSGEQECFRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDG 180

Query: 181 YPVTARTFTLLICTCGDAGLARKVVERFIKSKTFNYRPFKHSYNAILHALLGIKQYKLIE 240
           +P TARTF LLIC+CG+AGLA++ V +F+KSKTFNYRPFKHSYNAIL++LLG+KQYKLIE
Sbjct: 181 FPTTARTFNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIE 240

Query: 241 WVYQQMLLDGHSSDMLTYNLLLYARCKLGKLDQFHRLLDEMARNGFSPDYHTYNILLYVL 300
           WVY+QML DG S D+LTYN+LL+   +LGK+D+F RL DEMAR+GFSPD +TYNILL++L
Sbjct: 241 WVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHIL 300

Query: 301 GKGDKPLAALNLLNHMREVGSDPSILHFTTLINGLSRAGNLEACKYFFDELSNNGCTPDV 360
           GKG+KPLAAL  LNHM+EVG DPS+LH+TTLI+GLSRAGNLEACKYF DE+   GC PDV
Sbjct: 301 GKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDV 360

Query: 361 VCYTVMITSYTVAGEHEKARELFDEMVIKGQLPNVFTYNSMIRGFCMVGEFEEAYTMLKE 420
           VCYTVMIT Y V+GE +KA+E+F EM +KGQLPNVFTYNSMIRG CM GEF EA  +LKE
Sbjct: 361 VCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKE 420

Query: 421 MESRGCKPNFLVYSTLVSYLRNAGQLSEAHKVITHMVEKGQYAHLVTKFKGYRR 475
           MESRGC PNF+VYSTLVSYLR AG+LSEA KVI  MV+KG Y HLV K   YRR
Sbjct: 421 MESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKGHYVHLVPKMMKYRR 473

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BLAST of CmaCh18G012460 vs. Swiss-Prot
Match: PP236_ARATH (Pentatricopeptide repeat-containing protein At3g16010 OS=Arabidopsis thaliana GN=At3g16010 PE=2 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 9.3e-38
Identity = 109/373 (29.22%), Postives = 178/373 (47.72%), Query Frame = 1 

Query: 91  GFDTLVALDELQLKVSGVLVREVLRGILRSINVLDKTQCAKLGYKFFVWSGKVENFNHTA 150
           G D   AL+ L+LKV   LVR +L  I   INV           +FF W+GK  NF H  
Sbjct: 77  GPDAEKALEVLKLKVDHRLVRSILE-IDVEINVK---------IQFFKWAGKRRNFQHDC 136

Query: 151 SSYHLIMKIFAECEEFKAMWRLVDEMTEKGY-PVTARTFTLLICTCGDAGLARKVVERFI 210
           S+Y  +++   E   +  M+R + E+    Y  V+    + L+   G A +  K +  F 
Sbjct: 137 STYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKMVSKALSVFY 196

Query: 211 KSKTFNYRPFKHSYNAILHALLGIKQYKLIEWVYQQMLLDGHS-SDMLTYNLLLYARCKL 270
           ++K    +P   +YN+++  L+   Q++ +  VY +M  +G    D +TY+ L+ +  KL
Sbjct: 197 QAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKL 256

Query: 271 GKLDQFHRLLDEMARNGFSPDYHTYNILLYVLGKGDKPLAALNLLNHMREVGSDPSILHF 330
           G+ D   RL DEM  N   P    Y  LL +  K  K   AL+L   M+  G  P++  +
Sbjct: 257 GRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTY 316

Query: 331 TTLINGLSRAGNLEACKYFFDELSNNGCTPDVVCYTVMITSYTVAGEHEKARELFDEMVI 390
           T LI GL +AG ++    F+ ++  +G TPDVV    ++      G  E+   +F EM +
Sbjct: 317 TELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGM 376

Query: 391 KGQLPNVFTYNSMIRG-FCMVGEFEEAYTMLKEMESRGCKPNFLVYSTLVSYLRNAGQLS 450
               P V +YN++I+  F       E  +   +M++    P+   YS L+       ++ 
Sbjct: 377 WRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVE 436

Query: 451 EAHKVITHMVEKG 461
           +A  ++  M EKG
Sbjct: 437 KALLLLEEMDEKG 439

[Close]
BLAST of CmaCh18G012460 vs. Swiss-Prot
Match: PP447_ARATH (Putative pentatricopeptide repeat-containing protein At5g65820 OS=Arabidopsis thaliana GN=At5g65820 PE=3 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 3.5e-37
Identity = 109/414 (26.33%), Postives = 193/414 (46.62%), Query Frame = 1 

Query: 48  LERSESCEFESLRYDDLSVRRGFLEDSKTDAGKVLEVLKQDGPGFDTLVALDELQLKVSG 107
           LE+S +   ++ +YD+ +          +D  K   +L++    F + V   EL L  SG
Sbjct: 63  LEKSHNDRTKNSKYDEFA----------SDVEKSYRILRK----FHSRVPKLELALNESG 122

Query: 108 VLVREVLRGILRSINVLDKTQCAKLGYKFFVWSGKVENFNHTASSYHLIMKIFAECEEFK 167
           V +R  L  I R +N         LGY+FFVW+ K   + H+   Y  ++KI ++  +F 
Sbjct: 123 VELRPGL--IERVLNRCG--DAGNLGYRFFVWAAKQPRYCHSIEVYKSMVKILSKMRQFG 182

Query: 168 AMWRLVDEM-TEKGYPVTARTFTLLICTCGDAGLARKVVERFIKSKTFNYRPFKHSYNAI 227
           A+W L++EM  E    +    F +L+     A + +K +E   +   F + P ++ +  +
Sbjct: 183 AVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCL 242

Query: 228 LHALLGIKQYKLIEWVYQQMLLDGHSSDMLTYNLLLYARCKLGKLDQFHRLLDEMARNGF 287
           L AL      K    +++ M +     ++  +  LLY  C++GK+ +   +L +M   GF
Sbjct: 243 LDALCKHGSVKDAAKLFEDMRM-RFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGF 302

Query: 288 SPDYHTYNILLYVLGKGDKPLAALNLLNHMREVGSDPSILHFTTLINGLSRAGNLEACKY 347
            PD   Y  LL       K   A +LL  MR  G +P+   +T LI  L +   +E    
Sbjct: 303 EPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMK 362

Query: 348 FFDELSNNGCTPDVVCYTVMITSYTVAGEHEKARELFDEMVIKGQLPNVFTYNSMIRGFC 407
            F E+    C  DVV YT +++ +   G+ +K   + D+M+ KG +P+  TY  ++    
Sbjct: 363 VFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHE 422

Query: 408 MVGEFEEAYTMLKEMESRGCKPNFLVYSTLVSYLRNAGQLSEAHKVITHMVEKG 461
               FEE   ++++M      P+  +Y+ ++      G++ EA ++   M E G
Sbjct: 423 KKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENG 457

[Close]
BLAST of CmaCh18G012460 vs. Swiss-Prot
Match: PP298_ARATH (Pentatricopeptide repeat-containing protein At4g01400, mitochondrial OS=Arabidopsis thaliana GN=At4g01400 PE=2 SV=2)

HSP 1 Score: 156.8 bits (395), Expect = 6.0e-37
Identity = 100/335 (29.85%), Postives = 159/335 (47.46%), Query Frame = 1 

Query: 132 LGYKFFVWSGKVENFNHTASSYHLIMKIFAECEEFKAMWRLVDEMTEKGYPVTARTFTLL 191
           L  + F ++ +  NF H+ SS+ +++        F  +  ++ +    GYP+T   FT L
Sbjct: 66  LAKEIFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYPLTGEIFTYL 125

Query: 192 ICTCGDAGLARKVVERFIKSKTFNYRPFKHSYNAILHALLGIKQY--KLIEWVYQQMLLD 251
           I    +A L  KV+  F K   FN+ P     N IL  L+  + Y  K  E +++   L 
Sbjct: 126 IKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFE-LFKSSRLH 185

Query: 252 GHSSDMLTYNLLLYARCKLGKLDQFHRLLDEMARNGFSPDYHTYNILLYVLGKGDKPLAA 311
           G   +  +YNLL+ A C    L   ++L  +M      PD  +Y IL+    +  +   A
Sbjct: 186 GVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGA 245

Query: 312 LNLLNHMREVGSDPSILHFTTLINGLSRAGNLEACKYFFDELSNNGCTPDVVCYTVMITS 371
           + LL+ M   G  P  L +TTL+N L R   L         +   GC PD+V Y  MI  
Sbjct: 246 MELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILG 305

Query: 372 YTVAGEHEKARELFDEMVIKGQLPNVFTYNSMIRGFCMVGEFEEAYTMLKEMESRGCKPN 431
           +        AR++ D+M+  G  PN  +Y ++I G C  G F+E    L+EM S+G  P+
Sbjct: 306 FCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPH 365

Query: 432 FLVYSTLVSYLRNAGQLSEAHKVITHMVEKGQYAH 465
           F V + LV    + G++ EA  V+  +++ G+  H
Sbjct: 366 FSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLH 399

[Close]
BLAST of CmaCh18G012460 vs. TrEMBL
Match: A0A0A0L8P4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G182100 PE=4 SV=1)

HSP 1 Score: 793.1 bits (2047), Expect = 1.9e-226
Identity = 377/476 (79.20%), Postives = 431/476 (90.55%), Query Frame = 1 

Query: 1   MNALSLLSTRIVWRLVSNSFIVRRTIWNRSFGSDDRFEFVMEPYKKGLE-RSESCEFESL 60
           MN+LSL+S+RIV RL S SFIVRRTIWNR+F SDDRF+F +EP+    +  S+S E +S 
Sbjct: 1   MNSLSLVSSRIVCRLFSTSFIVRRTIWNRNFCSDDRFQFFVEPFSYLADGNSDSFETDSR 60

Query: 61  RYDDLSVRRGFLEDSKTDAGKVLEVLKQDGPGFDTLVALDELQLKVSGVLVREVLRGILR 120
           R+DD S RR FL+D+K DA KV+E+LKQDGPGFDT +ALDELQLKVSGVLV EVL+GIL+
Sbjct: 61  RWDDFSFRRSFLKDAKIDAEKVIEILKQDGPGFDTFLALDELQLKVSGVLVGEVLKGILK 120

Query: 121 SINVLDKTQCAKLGYKFFVWSGKVENFNHTASSYHLIMKIFAECEEFKAMWRLVDEMTEK 180
           S +VL+KTQCAKLGYKFF+WSG++EN+ HT +SYH+IMKIFAECEEFKAMWR++DEMTEK
Sbjct: 121 SKSVLNKTQCAKLGYKFFIWSGRIENYRHTVNSYHIIMKIFAECEEFKAMWRVLDEMTEK 180

Query: 181 GYPVTARTFTLLICTCGDAGLARKVVERFIKSKTFNYRPFKHSYNAILHALLGIKQYKLI 240
           GYPVTARTF +LICTCG+AGLA++VVERFIKSKTFN+RP+KHSYNAILH L+ +KQYKLI
Sbjct: 181 GYPVTARTFMILICTCGEAGLAKRVVERFIKSKTFNFRPYKHSYNAILHGLVIVKQYKLI 240

Query: 241 EWVYQQMLLDGHSSDMLTYNLLLYARCKLGKLDQFHRLLDEMARNGFSPDYHTYNILLYV 300
            WVY QMLLD HS D+LTYN+LL++ CKLGKLDQFHRLLDEMAR GFSPD+HTYNILLYV
Sbjct: 241 GWVYDQMLLDDHSPDILTYNVLLFSSCKLGKLDQFHRLLDEMARKGFSPDFHTYNILLYV 300

Query: 301 LGKGDKPLAALNLLNHMREVGSDPSILHFTTLINGLSRAGNLEACKYFFDELSNNGCTPD 360
           LGKGDKPLAALNLLNHMREVG  P++LHFTTLINGLSRAGNL+ACKYFFDEL NNGC PD
Sbjct: 301 LGKGDKPLAALNLLNHMREVGFGPNVLHFTTLINGLSRAGNLDACKYFFDELGNNGCIPD 360

Query: 361 VVCYTVMITSYTVAGEHEKARELFDEMVIKGQLPNVFTYNSMIRGFCMVGEFEEAYTMLK 420
           VVCYTVMITS+T AG+HEKAR  FDEM++KGQLPNVFTYNSMIRGFCMVG+F+EAY+ML 
Sbjct: 361 VVCYTVMITSFTEAGQHEKARAFFDEMIMKGQLPNVFTYNSMIRGFCMVGKFKEAYSMLS 420

Query: 421 EMESRGCKPNFLVYSTLVSYLRNAGQLSEAHKVITHMVEKGQYAHLVTKFKGYRRC 476
           EMESRGC+PNFLVYSTLVSYLRNAG+L EAHKVI  MVE GQYAHL+TKFKGYRRC
Sbjct: 421 EMESRGCRPNFLVYSTLVSYLRNAGKLGEAHKVIKQMVENGQYAHLMTKFKGYRRC 476

[Close]
BLAST of CmaCh18G012460 vs. TrEMBL
Match: M5XQE6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025794mg PE=4 SV=1)

HSP 1 Score: 673.3 bits (1736), Expect = 2.1e-190
Identity = 314/427 (73.54%), Postives = 375/427 (87.82%), Query Frame = 1 

Query: 49  ERSESCEFESLRYDDLSVRRGFLEDSKTDAGKVLEVLKQDGPGFDTLVALDELQLKVSGV 108
           E+    E+E+   +  S+RR F E++K    +VLEVL+QDGPGFDT  ALDEL ++VSG+
Sbjct: 20  EKQNVPEYENRPREYFSLRRSFFENAKIHTRRVLEVLQQDGPGFDTKAALDELHIEVSGL 79

Query: 109 LVREVLRGILRSINVLDKTQCAKLGYKFFVWSGKVENFNHTASSYHLIMKIFAECEEFKA 168
           LVREVL  IL+ +N   K +CAKLGYKFFVWSG++EN+ HTA++YHL+MKIFA+CEEFKA
Sbjct: 80  LVREVLFKILKQVNYASKMRCAKLGYKFFVWSGQLENYRHTANTYHLMMKIFADCEEFKA 139

Query: 169 MWRLVDEMTEKGYPVTARTFTLLICTCGDAGLARKVVERFIKSKTFNYRPFKHSYNAILH 228
           MWRLVDEM EKGYP TA+TF +LICTCG+AGLA+KVVERFIKSKTFNYRPFKHSYNAILH
Sbjct: 140 MWRLVDEMIEKGYPTTAQTFNILICTCGEAGLAKKVVERFIKSKTFNYRPFKHSYNAILH 199

Query: 229 ALLGIKQYKLIEWVYQQMLLDGHSSDMLTYNLLLYARCKLGKLDQFHRLLDEMARNGFSP 288
           +L+ +KQYKLIEWVYQQML DGH +D+LTYN+++YA+ +LGKLDQFHRLL+EM R+GF+P
Sbjct: 200 SLVVVKQYKLIEWVYQQMLADGHCTDILTYNVMMYAKYRLGKLDQFHRLLEEMGRSGFAP 259

Query: 289 DYHTYNILLYVLGKGDKPLAALNLLNHMREVGSDPSILHFTTLINGLSRAGNLEACKYFF 348
           D HTYNILL+VLGKGDKPLAALNLLNHM+EVG DPS+LHFTTLI+GLSR+GNL+ACKYFF
Sbjct: 260 DLHTYNILLHVLGKGDKPLAALNLLNHMKEVGLDPSVLHFTTLIDGLSRSGNLDACKYFF 319

Query: 349 DELSNNGCTPDVVCYTVMITSYTVAGEHEKARELFDEMVIKGQLPNVFTYNSMIRGFCMV 408
           DE+  + C PDVVCYTVMI+ Y VAGE EKA+ +FDEM+  GQLPNVFTYN+MIRG CM 
Sbjct: 320 DEMIKHECFPDVVCYTVMISGYIVAGELEKAQGVFDEMIPNGQLPNVFTYNAMIRGLCMA 379

Query: 409 GEFEEAYTMLKEMESRGCKPNFLVYSTLVSYLRNAGQLSEAHKVITHMVEKGQYAHLVTK 468
           G+FEEA +MLK+MESRGC PNF VYSTLVSYLRNAG+L++AH+VITHMVEKGQY HL++K
Sbjct: 380 GKFEEACSMLKDMESRGCNPNFTVYSTLVSYLRNAGKLAKAHEVITHMVEKGQYTHLLSK 439

Query: 469 FKGYRRC 476
           FKGYRRC
Sbjct: 440 FKGYRRC 446

[Close]
BLAST of CmaCh18G012460 vs. TrEMBL
Match: V4S4A4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10004849mg PE=4 SV=1)

HSP 1 Score: 671.0 bits (1730), Expect = 1.1e-189
Identity = 314/411 (76.40%), Postives = 367/411 (89.29%), Query Frame = 1 

Query: 65  SVRRGFLEDSKTDAGKVLEVLKQDGPGFDTLVALDELQLKVSGVLVREVLRGILRSINVL 124
           S+RR FL++ K DA +VLE+L+ DGPGFD  + L E  ++VS +LVREVL GILRS+N  
Sbjct: 77  SIRRMFLDNVKFDASRVLEILQNDGPGFDAKLVLSESGIRVSEILVREVLSGILRSVNYA 136

Query: 125 DKTQCAKLGYKFFVWSGKVENFNHTASSYHLIMKIFAECEEFKAMWRLVDEMTEKGYPVT 184
           DKT+CAKLGYKFFVWSG+ ENF HTA+SYHLIMKIFA+CEEFKAMWRLVDEM E G+P T
Sbjct: 137 DKTKCAKLGYKFFVWSGQQENFRHTANSYHLIMKIFADCEEFKAMWRLVDEMIENGFPTT 196

Query: 185 ARTFTLLICTCGDAGLARKVVERFIKSKTFNYRPFKHSYNAILHALLGIKQYKLIEWVYQ 244
           ARTF +LICTCG+ GLARKVVERFIKSK FN+RPFK+SYNAILHALLGI+QYKLIEWVYQ
Sbjct: 197 ARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQ 256

Query: 245 QMLLDGHSSDMLTYNLLLYARCKLGKLDQFHRLLDEMARNGFSPDYHTYNILLYVLGKGD 304
           QM  +G++ D+LTYN+++ A+ +LGKLDQFHRLLDEM R+GFSPD+HTYNILL+VLGKGD
Sbjct: 257 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 316

Query: 305 KPLAALNLLNHMREVGSDPSILHFTTLINGLSRAGNLEACKYFFDELSNNGCTPDVVCYT 364
           KPLAALNLLNHM+EVG DPS+LHFTTL++GLSRAGNL+ACKYFFDE++N GC PDVVCYT
Sbjct: 317 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 376

Query: 365 VMITSYTVAGEHEKARELFDEMVIKGQLPNVFTYNSMIRGFCMVGEFEEAYTMLKEMESR 424
           VMITSY  AGE EKA++LFD M+ KGQLPNVFTYNSMIRGFCM G+F+EA TM+KEMESR
Sbjct: 377 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 436

Query: 425 GCKPNFLVYSTLVSYLRNAGQLSEAHKVITHMVEKGQYAHLVTKFKGYRRC 476
           GC PNFLVY+TLVS LRNAG+L+EAH+VI HMVEKG+Y HLV+KFK Y+RC
Sbjct: 437 GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKFKRYKRC 487

[Close]
BLAST of CmaCh18G012460 vs. TrEMBL
Match: W9S7I4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_015785 PE=4 SV=1)

HSP 1 Score: 667.5 bits (1721), Expect = 1.2e-188
Identity = 330/498 (66.27%), Postives = 393/498 (78.92%), Query Frame = 1 

Query: 1   MNALSLLSTRIVWRLVS----------NSFIVRRTIWNRSF---GSDDRFEFVMEPYKKG 60
           MN +SL +  +V R  S          +S +V R   NRSF     ++ ++   EP K+ 
Sbjct: 1   MNVISLSAPSLVRRTSSCLIVVSKVTLSSLVVIRNFCNRSFDGVNGENGYDCFEEPLKRM 60

Query: 61  LERS-------ESCEFESLRYD---DLSVRRGFLEDSKTDAGKVLEVLKQDGPGFDTLVA 120
            + S       E  +F S       + SVR+ F E ++ DAG+VLEVL+QDGPGFD   A
Sbjct: 61  WKSSYFDSDMDEQSDFYSREMPARGNFSVRQSFFETARIDAGRVLEVLQQDGPGFDAKPA 120

Query: 121 LDELQLKVSGVLVREVLRGILRSINVLDKTQCAKLGYKFFVWSGKVENFNHTASSYHLIM 180
           LDEL ++VSG+LVR+VL GIL +I+  +K +CAKLG+KFF WSG+  N+ HTA+SYHL++
Sbjct: 121 LDELNIRVSGLLVRKVLLGILSNISHTNKIRCAKLGFKFFTWSGQQGNYRHTANSYHLLI 180

Query: 181 KIFAECEEFKAMWRLVDEMTEKGYPVTARTFTLLICTCGDAGLARKVVERFIKSKTFNYR 240
           KIFAECEEFKAMWRLVDEM E+G+P TART  +LICTCG+AGLARKVVERFIKSKTFN+R
Sbjct: 181 KIFAECEEFKAMWRLVDEMIERGFPTTARTLNILICTCGEAGLARKVVERFIKSKTFNFR 240

Query: 241 PFKHSYNAILHALLGIKQYKLIEWVYQQMLLDGHSSDMLTYNLLLYARCKLGKLDQFHRL 300
           PFKHSYNAILH LL   QYKLIEWVYQQML DG S D+LTYN+L+  + +LGKLDQFHRL
Sbjct: 241 PFKHSYNAILHCLLVTNQYKLIEWVYQQMLADGFSPDILTYNVLMLTKYRLGKLDQFHRL 300

Query: 301 LDEMARNGFSPDYHTYNILLYVLGKGDKPLAALNLLNHMREVGSDPSILHFTTLINGLSR 360
           LDEM R GFSPD HTYNILL+VLGKGDKPLAALNLLNHM+E G DP +LHFTTLI+GLSR
Sbjct: 301 LDEMGRRGFSPDLHTYNILLHVLGKGDKPLAALNLLNHMKETGIDPGVLHFTTLIDGLSR 360

Query: 361 AGNLEACKYFFDELSNNGCTPDVVCYTVMITSYTVAGEHEKARELFDEMVIKGQLPNVFT 420
           AGNL+AC++FFDE+  NGC PDVVCYTVMIT Y VAGE EKA+ +FDEM+ KGQ+PNVFT
Sbjct: 361 AGNLDACRFFFDEMPKNGCIPDVVCYTVMITGYVVAGELEKAQSIFDEMITKGQIPNVFT 420

Query: 421 YNSMIRGFCMVGEFEEAYTMLKEMESRGCKPNFLVYSTLVSYLRNAGQLSEAHKVITHMV 476
           YNSMIRG CM G+FEEA +MLK+MESRGC PNFLVY+TLVS LRNAG+LSEAH+V+ HMV
Sbjct: 421 YNSMIRGLCMAGKFEEACSMLKDMESRGCNPNFLVYTTLVSNLRNAGKLSEAHQVVKHMV 480

[Close]
BLAST of CmaCh18G012460 vs. TrEMBL
Match: A0A059DJY2_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A02787 PE=4 SV=1)

HSP 1 Score: 658.3 bits (1697), Expect = 7.1e-186
Identity = 325/487 (66.74%), Postives = 386/487 (79.26%), Query Frame = 1 

Query: 1   MNALSLLSTRIVWRLVSNSFIVRRTIWNRSFGSD---DRFEFVMEPYKKGLERSES---- 60
           MN+ +L   RIV + +S+  I  RT+ +R F      + FE V EP KK           
Sbjct: 1   MNSRALFGPRIVHK-ISHLLISCRTLCDRGFRGGKIKEGFECVEEPLKKMWVNDSDGFMD 60

Query: 61  -----CEFESLRYDDLSVRRGFLEDSKTDAGKVLEVLKQDGPGFDTLVALDELQLKVSGV 120
                 E+ES   +  S R+ F  +++  A KVL VL+QDGPGFD   +L+EL+++VSG+
Sbjct: 61  DARILSEYESSDEEYYSTRQNFCANARVGAEKVLRVLQQDGPGFDVKTSLEELRVRVSGL 120

Query: 121 LVREVLRGILRSINVLDKTQCAKLGYKFFVWSGKVENFNHTASSYHLIMKIFAECEEFKA 180
           LVREVL GILRS    +K++C KLGYKFFVWSG  EN+ HT  +YH +MKIFAEC+EFKA
Sbjct: 121 LVREVLLGILRSTEFANKSRCVKLGYKFFVWSGMQENYRHTTDAYHSMMKIFAECDEFKA 180

Query: 181 MWRLVDEMTEKGYPVTARTFTLLICTCGDAGLARKVVERFIKSKTFNYRPFKHSYNAILH 240
           MWRLVDEM EKG  +TARTF +LICTCG+ GLAR+VVERFIKSK FNYRPFKHSYNAILH
Sbjct: 181 MWRLVDEMIEKGLFMTARTFNILICTCGEVGLARRVVERFIKSKAFNYRPFKHSYNAILH 240

Query: 241 ALLGIKQYKLIEWVYQQMLLDGHSSDMLTYNLLLYARCKLGKLDQFHRLLDEMARNGFSP 300
           +L+ +KQYKLIEWVYQQML DG S D+LTYN+L+ A+ +LGKLDQFHRLLDEM R GFSP
Sbjct: 241 SLVALKQYKLIEWVYQQMLADGLSPDILTYNILMCAKYRLGKLDQFHRLLDEMGRRGFSP 300

Query: 301 DYHTYNILLYVLGKGDKPLAALNLLNHMREVGSDPSILHFTTLINGLSRAGNLEACKYFF 360
           D+HTYN+LL+VLGKGDKPLAAL+LLNHMREVG DPS+LHFTTL++GLSRAGNL+ACKYFF
Sbjct: 301 DFHTYNLLLHVLGKGDKPLAALSLLNHMREVGIDPSVLHFTTLMDGLSRAGNLDACKYFF 360

Query: 361 DELSNNGCTPDVVCYTVMITSYTVAGEHEKARELFDEMVIKGQLPNVFTYNSMIRGFCMV 420
           DE+  N C PDVVCYTV+IT Y VAGE EKA E+F++M+I GQLPNVFTYNSMIRG+CM 
Sbjct: 361 DEMIKNNCKPDVVCYTVLITGYVVAGELEKAIEMFNKMMIDGQLPNVFTYNSMIRGYCMA 420

Query: 421 GEFEEAYTMLKEMESRGCKPNFLVYSTLVSYLRNAGQLSEAHKVITHMVEKGQYAHLVTK 476
           G F EA +ML EME+RGC PNFLVYSTLVSYLRNAG+LS+AH VI  MVEKGQY HLV+K
Sbjct: 421 GNFAEACSMLNEMEARGCNPNFLVYSTLVSYLRNAGKLSQAHSVIRRMVEKGQYVHLVSK 480

[Close]
BLAST of CmaCh18G012460 vs. TAIR10
Match: AT1G55630.1 (AT1G55630.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 614.4 bits (1583), Expect = 6.0e-176
Identity = 303/476 (63.66%), Postives = 367/476 (77.10%), Query Frame = 1 

Query: 1   MNALSLLSTRIVWRLVSNSFIVRRTIWNRSFGSDDRFEFVMEPYKKGLERSE-SCEFESL 60
           MN++   ST +  R  S      R   N S G D       EP K   E SE  CEF+  
Sbjct: 1   MNSVIHYSTSVAVRKASRFLFTSRKFCNGSIGGDVTDNGTEEPLKITWESSEMDCEFDQE 60

Query: 61  RYDD-LSVRRGFLEDSKTDAGKVLEVLKQDGPGFDTLVALDELQLKVSGVLVREVLRGIL 120
              + +SVR+ F+E +K  A +VL+ L+QD PGF+T  ALDEL + +SG+LVREVL GIL
Sbjct: 61  ENGEKISVRKRFMESTKLSASRVLDTLQQDCPGFNTKSALDELNVSISGLLVREVLVGIL 120

Query: 121 RSINVLDKTQCAKLGYKFFVWSGKVENFNHTASSYHLIMKIFAECEEFKAMWRLVDEMTE 180
           R+++  +KT+CAKL YKFFVW G  ENF HTA+ YHL+MKIFAEC E+KAM RL+DEM +
Sbjct: 121 RTLSFDNKTRCAKLAYKFFVWCGGQENFRHTANCYHLLMKIFAECGEYKAMCRLIDEMIK 180

Query: 181 KGYPVTARTFTLLICTCGDAGLARKVVERFIKSKTFNYRPFKHSYNAILHALLGIKQYKL 240
            GYP TA TF LLICTCG+AGLAR VVE+FIKSKTFNYRP+KHSYNAILH+LLG+KQYKL
Sbjct: 181 DGYPTTACTFNLLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKL 240

Query: 241 IEWVYQQMLLDGHSSDMLTYNLLLYARCKLGKLDQFHRLLDEMARNGFSPDYHTYNILLY 300
           I+WVY+QML DG + D+LTYN++++A  +LGK D+ +RLLDEM ++GFSPD +TYNILL+
Sbjct: 241 IDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLH 300

Query: 301 VLGKGDKPLAALNLLNHMREVGSDPSILHFTTLINGLSRAGNLEACKYFFDELSNNGCTP 360
            L  G+KPLAALNLLNHMREVG +P ++HFTTLI+GLSRAG LEACKYF DE    GCTP
Sbjct: 301 HLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTP 360

Query: 361 DVVCYTVMITSYTVAGEHEKARELFDEMVIKGQLPNVFTYNSMIRGFCMVGEFEEAYTML 420
           DVVCYTVMIT Y   GE EKA E+F EM  KGQLPNVFTYNSMIRGFCM G+F+EA  +L
Sbjct: 361 DVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALL 420

Query: 421 KEMESRGCKPNFLVYSTLVSYLRNAGQLSEAHKVITHMVEKGQYAHLVTKFKGYRR 475
           KEMESRGC PNF+VYSTLV+ L+NAG++ EAH+V+  MVEKG Y HL++K K YRR
Sbjct: 421 KEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKGHYVHLISKLKKYRR 476

[Close]
BLAST of CmaCh18G012460 vs. TAIR10
Match: AT3G60050.1 (AT3G60050.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 602.4 bits (1552), Expect = 2.3e-172
Identity = 299/474 (63.08%), Postives = 366/474 (77.22%), Query Frame = 1 

Query: 1   MNALSLLSTRIVWRLVSNSFIVRRTIWNRSFGSDDRFEFVMEPYKKGLERSESCEFESLR 60
           MN   +L T +V +     FI R+   N +FG ++      +      E S   E  S+ 
Sbjct: 1   MNLALVLGTNVVRKAYRFLFISRK-FCNGNFGGNEIDNGFPDLDCGFDEDSNISELRSID 60

Query: 61  YDDLSVRRGFLEDSKTDAGKVLEVLKQDGPGFDTLVALDELQLKVSGVLVREVLRGILRS 120
            + +SVR  FLE +   A +VL  L+ D  GF++   LDEL ++VSG+LVREVL GILR+
Sbjct: 61  REVISVRSRFLESANHSASRVLVTLQLDESGFNSKSVLDELNVRVSGLLVREVLVGILRN 120

Query: 121 INVLDKTQCAKLGYKFFVWSGKVENFNHTASSYHLIMKIFAECEEFKAMWRLVDEMTEKG 180
           ++  +K +CAKL Y+FF+WSG+ E F HT +SYHL+MKIFAEC E+KAMWRLVDEM + G
Sbjct: 121 LSYDNKARCAKLAYRFFLWSGEQECFRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDG 180

Query: 181 YPVTARTFTLLICTCGDAGLARKVVERFIKSKTFNYRPFKHSYNAILHALLGIKQYKLIE 240
           +P TARTF LLIC+CG+AGLA++ V +F+KSKTFNYRPFKHSYNAIL++LLG+KQYKLIE
Sbjct: 181 FPTTARTFNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIE 240

Query: 241 WVYQQMLLDGHSSDMLTYNLLLYARCKLGKLDQFHRLLDEMARNGFSPDYHTYNILLYVL 300
           WVY+QML DG S D+LTYN+LL+   +LGK+D+F RL DEMAR+GFSPD +TYNILL++L
Sbjct: 241 WVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHIL 300

Query: 301 GKGDKPLAALNLLNHMREVGSDPSILHFTTLINGLSRAGNLEACKYFFDELSNNGCTPDV 360
           GKG+KPLAAL  LNHM+EVG DPS+LH+TTLI+GLSRAGNLEACKYF DE+   GC PDV
Sbjct: 301 GKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDV 360

Query: 361 VCYTVMITSYTVAGEHEKARELFDEMVIKGQLPNVFTYNSMIRGFCMVGEFEEAYTMLKE 420
           VCYTVMIT Y V+GE +KA+E+F EM +KGQLPNVFTYNSMIRG CM GEF EA  +LKE
Sbjct: 361 VCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKE 420

Query: 421 MESRGCKPNFLVYSTLVSYLRNAGQLSEAHKVITHMVEKGQYAHLVTKFKGYRR 475
           MESRGC PNF+VYSTLVSYLR AG+LSEA KVI  MV+KG Y HLV K   YRR
Sbjct: 421 MESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKGHYVHLVPKMMKYRR 473

[Close]
BLAST of CmaCh18G012460 vs. TAIR10
Match: AT3G60040.1 (AT3G60040.1 F-box family protein)

HSP 1 Score: 172.2 bits (435), Expect = 7.8e-43
Identity = 86/153 (56.21%), Postives = 104/153 (67.97%), Query Frame = 1 

Query: 322 DPSILHFTTLINGLSRAGNLEACKYFFDELSNNGCTPDVVCYTVMITSYTVAGEHEKARE 381
           D + L    L++ L +     A     + +   G  P V+ YT +I  Y V+GE +KA+E
Sbjct: 686 DGTQLLLIILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKE 745

Query: 382 LFDEMVIKGQLPNVFTYNSMIRGFCMVGEFEEAYTMLKEMESRGCKPNFLVYSTLVSYLR 441
           +F EM +KGQLPNVFTYNSMIRG CM GEF EA  +LKEMESRGC PNF+VYSTLV YLR
Sbjct: 746 MFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLR 805

Query: 442 NAGQLSEAHKVITHMVEKGQYAHLVTKFKGYRR 475
            AG+LSEA KVI  MV+KG Y HLV+K   YRR
Sbjct: 806 KAGKLSEARKVIKEMVKKGHYVHLVSKMMKYRR 838

[Close]
BLAST of CmaCh18G012460 vs. TAIR10
Match: AT3G16010.1 (AT3G16010.1 Pentatricopeptide repeat (PPR-like) superfamily protein)

HSP 1 Score: 159.5 bits (402), Expect = 5.3e-39
Identity = 109/373 (29.22%), Postives = 178/373 (47.72%), Query Frame = 1 

Query: 91  GFDTLVALDELQLKVSGVLVREVLRGILRSINVLDKTQCAKLGYKFFVWSGKVENFNHTA 150
           G D   AL+ L+LKV   LVR +L  I   INV           +FF W+GK  NF H  
Sbjct: 77  GPDAEKALEVLKLKVDHRLVRSILE-IDVEINVK---------IQFFKWAGKRRNFQHDC 136

Query: 151 SSYHLIMKIFAECEEFKAMWRLVDEMTEKGY-PVTARTFTLLICTCGDAGLARKVVERFI 210
           S+Y  +++   E   +  M+R + E+    Y  V+    + L+   G A +  K +  F 
Sbjct: 137 STYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKMVSKALSVFY 196

Query: 211 KSKTFNYRPFKHSYNAILHALLGIKQYKLIEWVYQQMLLDGHS-SDMLTYNLLLYARCKL 270
           ++K    +P   +YN+++  L+   Q++ +  VY +M  +G    D +TY+ L+ +  KL
Sbjct: 197 QAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKL 256

Query: 271 GKLDQFHRLLDEMARNGFSPDYHTYNILLYVLGKGDKPLAALNLLNHMREVGSDPSILHF 330
           G+ D   RL DEM  N   P    Y  LL +  K  K   AL+L   M+  G  P++  +
Sbjct: 257 GRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTY 316

Query: 331 TTLINGLSRAGNLEACKYFFDELSNNGCTPDVVCYTVMITSYTVAGEHEKARELFDEMVI 390
           T LI GL +AG ++    F+ ++  +G TPDVV    ++      G  E+   +F EM +
Sbjct: 317 TELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGM 376

Query: 391 KGQLPNVFTYNSMIRG-FCMVGEFEEAYTMLKEMESRGCKPNFLVYSTLVSYLRNAGQLS 450
               P V +YN++I+  F       E  +   +M++    P+   YS L+       ++ 
Sbjct: 377 WRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVE 436

Query: 451 EAHKVITHMVEKG 461
           +A  ++  M EKG
Sbjct: 437 KALLLLEEMDEKG 439

[Close]
BLAST of CmaCh18G012460 vs. TAIR10
Match: AT5G65820.1 (AT5G65820.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 157.5 bits (397), Expect = 2.0e-38
Identity = 109/414 (26.33%), Postives = 193/414 (46.62%), Query Frame = 1 

Query: 48  LERSESCEFESLRYDDLSVRRGFLEDSKTDAGKVLEVLKQDGPGFDTLVALDELQLKVSG 107
           LE+S +   ++ +YD+ +          +D  K   +L++    F + V   EL L  SG
Sbjct: 63  LEKSHNDRTKNSKYDEFA----------SDVEKSYRILRK----FHSRVPKLELALNESG 122

Query: 108 VLVREVLRGILRSINVLDKTQCAKLGYKFFVWSGKVENFNHTASSYHLIMKIFAECEEFK 167
           V +R  L  I R +N         LGY+FFVW+ K   + H+   Y  ++KI ++  +F 
Sbjct: 123 VELRPGL--IERVLNRCG--DAGNLGYRFFVWAAKQPRYCHSIEVYKSMVKILSKMRQFG 182

Query: 168 AMWRLVDEM-TEKGYPVTARTFTLLICTCGDAGLARKVVERFIKSKTFNYRPFKHSYNAI 227
           A+W L++EM  E    +    F +L+     A + +K +E   +   F + P ++ +  +
Sbjct: 183 AVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCL 242

Query: 228 LHALLGIKQYKLIEWVYQQMLLDGHSSDMLTYNLLLYARCKLGKLDQFHRLLDEMARNGF 287
           L AL      K    +++ M +     ++  +  LLY  C++GK+ +   +L +M   GF
Sbjct: 243 LDALCKHGSVKDAAKLFEDMRM-RFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGF 302

Query: 288 SPDYHTYNILLYVLGKGDKPLAALNLLNHMREVGSDPSILHFTTLINGLSRAGNLEACKY 347
            PD   Y  LL       K   A +LL  MR  G +P+   +T LI  L +   +E    
Sbjct: 303 EPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMK 362

Query: 348 FFDELSNNGCTPDVVCYTVMITSYTVAGEHEKARELFDEMVIKGQLPNVFTYNSMIRGFC 407
            F E+    C  DVV YT +++ +   G+ +K   + D+M+ KG +P+  TY  ++    
Sbjct: 363 VFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHE 422

Query: 408 MVGEFEEAYTMLKEMESRGCKPNFLVYSTLVSYLRNAGQLSEAHKVITHMVEKG 461
               FEE   ++++M      P+  +Y+ ++      G++ EA ++   M E G
Sbjct: 423 KKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENG 457

[Close]
BLAST of CmaCh18G012460 vs. NCBI nr
Match: gi|659077478|ref|XP_008439226.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g55630-like [Cucumis melo])

HSP 1 Score: 803.9 bits (2075), Expect = 1.5e-229
Identity = 383/476 (80.46%), Postives = 435/476 (91.39%), Query Frame = 1 

Query: 1   MNALSLLSTRIVWRLVSNSFIVRRTIWNRSFGSDDRFEFVMEPYKKGLE-RSESCEFESL 60
           MN+LSL+S+RIV RL S SFIVRRTIWNRSF SDDRF+FV+EP+    +  S+S E +S 
Sbjct: 1   MNSLSLVSSRIVCRLFSTSFIVRRTIWNRSFCSDDRFQFVVEPFSYFADGNSDSFETDSR 60

Query: 61  RYDDLSVRRGFLEDSKTDAGKVLEVLKQDGPGFDTLVALDELQLKVSGVLVREVLRGILR 120
           R+DD S+RR FL+D+K DA KV+E+LKQDGPGFDT +ALDEL+L+VSGVLV EVL+GIL+
Sbjct: 61  RWDDFSLRRSFLKDAKIDAEKVIEILKQDGPGFDTFLALDELKLQVSGVLVGEVLKGILK 120

Query: 121 SINVLDKTQCAKLGYKFFVWSGKVENFNHTASSYHLIMKIFAECEEFKAMWRLVDEMTEK 180
           S +VL+KTQCAKLGYKFFVWS ++EN+ HT  SYH+IMKIFAECEEFKAMWRL+DEMTEK
Sbjct: 121 STSVLNKTQCAKLGYKFFVWSSRIENYRHTVKSYHMIMKIFAECEEFKAMWRLLDEMTEK 180

Query: 181 GYPVTARTFTLLICTCGDAGLARKVVERFIKSKTFNYRPFKHSYNAILHALLGIKQYKLI 240
           GYPVTARTF +LICTCGDAGLA+KVVERFIKSKTFN+RP+KHSYNAILH L+ +KQYKLI
Sbjct: 181 GYPVTARTFMILICTCGDAGLAKKVVERFIKSKTFNFRPYKHSYNAILHGLVVVKQYKLI 240

Query: 241 EWVYQQMLLDGHSSDMLTYNLLLYARCKLGKLDQFHRLLDEMARNGFSPDYHTYNILLYV 300
           EWVY+QMLLDGH  D+LTYN+LL++RCKLGKLDQFHRLLDEMAR GFSPD+HTYNILLYV
Sbjct: 241 EWVYEQMLLDGHGPDILTYNVLLFSRCKLGKLDQFHRLLDEMARKGFSPDFHTYNILLYV 300

Query: 301 LGKGDKPLAALNLLNHMREVGSDPSILHFTTLINGLSRAGNLEACKYFFDELSNNGCTPD 360
           LGKGDKPLAALNLLNHMREVG  P+ILHFTTLINGLSRAGNL+ACKYFFDEL N+ C PD
Sbjct: 301 LGKGDKPLAALNLLNHMREVGFGPNILHFTTLINGLSRAGNLDACKYFFDELGNHDCIPD 360

Query: 361 VVCYTVMITSYTVAGEHEKARELFDEMVIKGQLPNVFTYNSMIRGFCMVGEFEEAYTMLK 420
           VVCYTVMITSYT AG+HEKAR  FDEM++KGQLPNVFTYNSMIRGFCMVG+F+EAY+ML 
Sbjct: 361 VVCYTVMITSYTEAGQHEKARAFFDEMIMKGQLPNVFTYNSMIRGFCMVGKFKEAYSMLS 420

Query: 421 EMESRGCKPNFLVYSTLVSYLRNAGQLSEAHKVITHMVEKGQYAHLVTKFKGYRRC 476
           EMESRGC+PNFLVYSTLVSYLRNAG+L+EAHKVIT MVE GQYAHL+TKFKGYRRC
Sbjct: 421 EMESRGCRPNFLVYSTLVSYLRNAGKLAEAHKVITRMVENGQYAHLMTKFKGYRRC 476

[Close]
BLAST of CmaCh18G012460 vs. NCBI nr
Match: gi|449446161|ref|XP_004140840.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g55630-like [Cucumis sativus])

HSP 1 Score: 793.1 bits (2047), Expect = 2.7e-226
Identity = 377/476 (79.20%), Postives = 431/476 (90.55%), Query Frame = 1 

Query: 1   MNALSLLSTRIVWRLVSNSFIVRRTIWNRSFGSDDRFEFVMEPYKKGLE-RSESCEFESL 60
           MN+LSL+S+RIV RL S SFIVRRTIWNR+F SDDRF+F +EP+    +  S+S E +S 
Sbjct: 1   MNSLSLVSSRIVCRLFSTSFIVRRTIWNRNFCSDDRFQFFVEPFSYLADGNSDSFETDSR 60

Query: 61  RYDDLSVRRGFLEDSKTDAGKVLEVLKQDGPGFDTLVALDELQLKVSGVLVREVLRGILR 120
           R+DD S RR FL+D+K DA KV+E+LKQDGPGFDT +ALDELQLKVSGVLV EVL+GIL+
Sbjct: 61  RWDDFSFRRSFLKDAKIDAEKVIEILKQDGPGFDTFLALDELQLKVSGVLVGEVLKGILK 120

Query: 121 SINVLDKTQCAKLGYKFFVWSGKVENFNHTASSYHLIMKIFAECEEFKAMWRLVDEMTEK 180
           S +VL+KTQCAKLGYKFF+WSG++EN+ HT +SYH+IMKIFAECEEFKAMWR++DEMTEK
Sbjct: 121 SKSVLNKTQCAKLGYKFFIWSGRIENYRHTVNSYHIIMKIFAECEEFKAMWRVLDEMTEK 180

Query: 181 GYPVTARTFTLLICTCGDAGLARKVVERFIKSKTFNYRPFKHSYNAILHALLGIKQYKLI 240
           GYPVTARTF +LICTCG+AGLA++VVERFIKSKTFN+RP+KHSYNAILH L+ +KQYKLI
Sbjct: 181 GYPVTARTFMILICTCGEAGLAKRVVERFIKSKTFNFRPYKHSYNAILHGLVIVKQYKLI 240

Query: 241 EWVYQQMLLDGHSSDMLTYNLLLYARCKLGKLDQFHRLLDEMARNGFSPDYHTYNILLYV 300
            WVY QMLLD HS D+LTYN+LL++ CKLGKLDQFHRLLDEMAR GFSPD+HTYNILLYV
Sbjct: 241 GWVYDQMLLDDHSPDILTYNVLLFSSCKLGKLDQFHRLLDEMARKGFSPDFHTYNILLYV 300

Query: 301 LGKGDKPLAALNLLNHMREVGSDPSILHFTTLINGLSRAGNLEACKYFFDELSNNGCTPD 360
           LGKGDKPLAALNLLNHMREVG  P++LHFTTLINGLSRAGNL+ACKYFFDEL NNGC PD
Sbjct: 301 LGKGDKPLAALNLLNHMREVGFGPNVLHFTTLINGLSRAGNLDACKYFFDELGNNGCIPD 360

Query: 361 VVCYTVMITSYTVAGEHEKARELFDEMVIKGQLPNVFTYNSMIRGFCMVGEFEEAYTMLK 420
           VVCYTVMITS+T AG+HEKAR  FDEM++KGQLPNVFTYNSMIRGFCMVG+F+EAY+ML 
Sbjct: 361 VVCYTVMITSFTEAGQHEKARAFFDEMIMKGQLPNVFTYNSMIRGFCMVGKFKEAYSMLS 420

Query: 421 EMESRGCKPNFLVYSTLVSYLRNAGQLSEAHKVITHMVEKGQYAHLVTKFKGYRRC 476
           EMESRGC+PNFLVYSTLVSYLRNAG+L EAHKVI  MVE GQYAHL+TKFKGYRRC
Sbjct: 421 EMESRGCRPNFLVYSTLVSYLRNAGKLGEAHKVIKQMVENGQYAHLMTKFKGYRRC 476

[Close]
BLAST of CmaCh18G012460 vs. NCBI nr
Match: gi|645257085|ref|XP_008234250.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g60050-like [Prunus mume])

HSP 1 Score: 684.5 bits (1765), Expect = 1.3e-193
Identity = 330/488 (67.62%), Postives = 403/488 (82.58%), Query Frame = 1 

Query: 1   MNALSLLSTRIVWRLVSNSFIVRRTIWNRSFGS---DDRFEFVMEPYKKGL--------- 60
           MN +SL   R++ + +S  F+V R + +  FG    D+  EF+ EP K+           
Sbjct: 1   MNCISLFGPRVIQK-ISCYFVVARKLSDGCFGGNKGDNGHEFIEEPLKRIWRSSDFDSVL 60

Query: 61  -ERSESCEFESLRYDDLSVRRGFLEDSKTDAGKVLEVLKQDGPGFDTLVALDELQLKVSG 120
            E+    E+E+   +  S+RR F E++K    +VLEVL+QDGPGFDT  ALDEL ++VSG
Sbjct: 61  DEKQNVHEYENRPREYFSLRRSFFENAKIHTRRVLEVLQQDGPGFDTKAALDELHIEVSG 120

Query: 121 VLVREVLRGILRSINVLDKTQCAKLGYKFFVWSGKVENFNHTASSYHLIMKIFAECEEFK 180
           +LVREVL  IL+ +N   K +CAKLGYKFFVWSG++EN+ HTA++YHL+MKIFA+CEEFK
Sbjct: 121 LLVREVLFNILKQVNYASKMRCAKLGYKFFVWSGQLENYRHTANTYHLMMKIFADCEEFK 180

Query: 181 AMWRLVDEMTEKGYPVTARTFTLLICTCGDAGLARKVVERFIKSKTFNYRPFKHSYNAIL 240
           AMWRLVDEM EKGYP TA+TF++LI TCG+AGLA+KVVERFIKSKTFNYRPFKHSYNAIL
Sbjct: 181 AMWRLVDEMIEKGYPTTAQTFSILIRTCGEAGLAKKVVERFIKSKTFNYRPFKHSYNAIL 240

Query: 241 HALLGIKQYKLIEWVYQQMLLDGHSSDMLTYNLLLYARCKLGKLDQFHRLLDEMARNGFS 300
           H+L+ +KQYKLIEWVYQQML DGH +D+LTYN+++YA+ +LGKLDQFHRLL+EM R+GF+
Sbjct: 241 HSLVVVKQYKLIEWVYQQMLADGHCTDILTYNVMMYAKYRLGKLDQFHRLLEEMGRSGFA 300

Query: 301 PDYHTYNILLYVLGKGDKPLAALNLLNHMREVGSDPSILHFTTLINGLSRAGNLEACKYF 360
           PD+HTYNILL+VLGKGDKPLAALNLLNHM+EVG DPS+LHFTTLI+GLSRAGNL+ACKYF
Sbjct: 301 PDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLIDGLSRAGNLDACKYF 360

Query: 361 FDELSNNGCTPDVVCYTVMITSYTVAGEHEKARELFDEMVIKGQLPNVFTYNSMIRGFCM 420
           FDE+  + C PDVVCYTVMI+ Y VAGE EKA+ +FDEM+  GQLPNVFTYN+MIRG CM
Sbjct: 361 FDEMIKHECFPDVVCYTVMISGYIVAGELEKAQGVFDEMIPNGQLPNVFTYNAMIRGLCM 420

Query: 421 VGEFEEAYTMLKEMESRGCKPNFLVYSTLVSYLRNAGQLSEAHKVITHMVEKGQYAHLVT 476
            G+FEEA +MLK+MESRGC PNF VYSTLVSYLRNAG+ ++AH+VITHMVEKGQY HL++
Sbjct: 421 AGKFEEACSMLKDMESRGCNPNFTVYSTLVSYLRNAGKRAKAHEVITHMVEKGQYTHLLS 480

[Close]
BLAST of CmaCh18G012460 vs. NCBI nr
Match: gi|596041207|ref|XP_007220061.1| (hypothetical protein PRUPE_ppa025794mg [Prunus persica])

HSP 1 Score: 673.3 bits (1736), Expect = 3.1e-190
Identity = 314/427 (73.54%), Postives = 375/427 (87.82%), Query Frame = 1 

Query: 49  ERSESCEFESLRYDDLSVRRGFLEDSKTDAGKVLEVLKQDGPGFDTLVALDELQLKVSGV 108
           E+    E+E+   +  S+RR F E++K    +VLEVL+QDGPGFDT  ALDEL ++VSG+
Sbjct: 20  EKQNVPEYENRPREYFSLRRSFFENAKIHTRRVLEVLQQDGPGFDTKAALDELHIEVSGL 79

Query: 109 LVREVLRGILRSINVLDKTQCAKLGYKFFVWSGKVENFNHTASSYHLIMKIFAECEEFKA 168
           LVREVL  IL+ +N   K +CAKLGYKFFVWSG++EN+ HTA++YHL+MKIFA+CEEFKA
Sbjct: 80  LVREVLFKILKQVNYASKMRCAKLGYKFFVWSGQLENYRHTANTYHLMMKIFADCEEFKA 139

Query: 169 MWRLVDEMTEKGYPVTARTFTLLICTCGDAGLARKVVERFIKSKTFNYRPFKHSYNAILH 228
           MWRLVDEM EKGYP TA+TF +LICTCG+AGLA+KVVERFIKSKTFNYRPFKHSYNAILH
Sbjct: 140 MWRLVDEMIEKGYPTTAQTFNILICTCGEAGLAKKVVERFIKSKTFNYRPFKHSYNAILH 199

Query: 229 ALLGIKQYKLIEWVYQQMLLDGHSSDMLTYNLLLYARCKLGKLDQFHRLLDEMARNGFSP 288
           +L+ +KQYKLIEWVYQQML DGH +D+LTYN+++YA+ +LGKLDQFHRLL+EM R+GF+P
Sbjct: 200 SLVVVKQYKLIEWVYQQMLADGHCTDILTYNVMMYAKYRLGKLDQFHRLLEEMGRSGFAP 259

Query: 289 DYHTYNILLYVLGKGDKPLAALNLLNHMREVGSDPSILHFTTLINGLSRAGNLEACKYFF 348
           D HTYNILL+VLGKGDKPLAALNLLNHM+EVG DPS+LHFTTLI+GLSR+GNL+ACKYFF
Sbjct: 260 DLHTYNILLHVLGKGDKPLAALNLLNHMKEVGLDPSVLHFTTLIDGLSRSGNLDACKYFF 319

Query: 349 DELSNNGCTPDVVCYTVMITSYTVAGEHEKARELFDEMVIKGQLPNVFTYNSMIRGFCMV 408
           DE+  + C PDVVCYTVMI+ Y VAGE EKA+ +FDEM+  GQLPNVFTYN+MIRG CM 
Sbjct: 320 DEMIKHECFPDVVCYTVMISGYIVAGELEKAQGVFDEMIPNGQLPNVFTYNAMIRGLCMA 379

Query: 409 GEFEEAYTMLKEMESRGCKPNFLVYSTLVSYLRNAGQLSEAHKVITHMVEKGQYAHLVTK 468
           G+FEEA +MLK+MESRGC PNF VYSTLVSYLRNAG+L++AH+VITHMVEKGQY HL++K
Sbjct: 380 GKFEEACSMLKDMESRGCNPNFTVYSTLVSYLRNAGKLAKAHEVITHMVEKGQYTHLLSK 439

Query: 469 FKGYRRC 476
           FKGYRRC
Sbjct: 440 FKGYRRC 446

[Close]
BLAST of CmaCh18G012460 vs. NCBI nr
Match: gi|567858468|ref|XP_006421917.1| (hypothetical protein CICLE_v10004849mg [Citrus clementina])

HSP 1 Score: 671.0 bits (1730), Expect = 1.5e-189
Identity = 314/411 (76.40%), Postives = 367/411 (89.29%), Query Frame = 1 

Query: 65  SVRRGFLEDSKTDAGKVLEVLKQDGPGFDTLVALDELQLKVSGVLVREVLRGILRSINVL 124
           S+RR FL++ K DA +VLE+L+ DGPGFD  + L E  ++VS +LVREVL GILRS+N  
Sbjct: 77  SIRRMFLDNVKFDASRVLEILQNDGPGFDAKLVLSESGIRVSEILVREVLSGILRSVNYA 136

Query: 125 DKTQCAKLGYKFFVWSGKVENFNHTASSYHLIMKIFAECEEFKAMWRLVDEMTEKGYPVT 184
           DKT+CAKLGYKFFVWSG+ ENF HTA+SYHLIMKIFA+CEEFKAMWRLVDEM E G+P T
Sbjct: 137 DKTKCAKLGYKFFVWSGQQENFRHTANSYHLIMKIFADCEEFKAMWRLVDEMIENGFPTT 196

Query: 185 ARTFTLLICTCGDAGLARKVVERFIKSKTFNYRPFKHSYNAILHALLGIKQYKLIEWVYQ 244
           ARTF +LICTCG+ GLARKVVERFIKSK FN+RPFK+SYNAILHALLGI+QYKLIEWVYQ
Sbjct: 197 ARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQ 256

Query: 245 QMLLDGHSSDMLTYNLLLYARCKLGKLDQFHRLLDEMARNGFSPDYHTYNILLYVLGKGD 304
           QM  +G++ D+LTYN+++ A+ +LGKLDQFHRLLDEM R+GFSPD+HTYNILL+VLGKGD
Sbjct: 257 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 316

Query: 305 KPLAALNLLNHMREVGSDPSILHFTTLINGLSRAGNLEACKYFFDELSNNGCTPDVVCYT 364
           KPLAALNLLNHM+EVG DPS+LHFTTL++GLSRAGNL+ACKYFFDE++N GC PDVVCYT
Sbjct: 317 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 376

Query: 365 VMITSYTVAGEHEKARELFDEMVIKGQLPNVFTYNSMIRGFCMVGEFEEAYTMLKEMESR 424
           VMITSY  AGE EKA++LFD M+ KGQLPNVFTYNSMIRGFCM G+F+EA TM+KEMESR
Sbjct: 377 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 436

Query: 425 GCKPNFLVYSTLVSYLRNAGQLSEAHKVITHMVEKGQYAHLVTKFKGYRRC 476
           GC PNFLVY+TLVS LRNAG+L+EAH+VI HMVEKG+Y HLV+KFK Y+RC
Sbjct: 437 GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKFKRYKRC 487

The following BLAST results are available for this feature:
BLAST of CmaCh18G012460 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PPR81_ARATH1.1e-17463.66Pentatricopeptide repeat-containing protein At1g55630 OS=Arabidopsis thaliana GN... [more]
PP288_ARATH4.2e-17163.08Pentatricopeptide repeat-containing protein At3g60050 OS=Arabidopsis thaliana GN... [more]
PP236_ARATH9.3e-3829.22Pentatricopeptide repeat-containing protein At3g16010 OS=Arabidopsis thaliana GN... [more]
PP447_ARATH3.5e-3726.33Putative pentatricopeptide repeat-containing protein At5g65820 OS=Arabidopsis th... [more]
PP298_ARATH6.0e-3729.85Pentatricopeptide repeat-containing protein At4g01400, mitochondrial OS=Arabidop... [more]
BLAST of CmaCh18G012460 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L8P4_CUCSA1.9e-22679.20Uncharacterized protein OS=Cucumis sativus GN=Csa_3G182100 PE=4 SV=1[more]
M5XQE6_PRUPE2.1e-19073.54Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025794mg PE=4 SV=1[more]
V4S4A4_9ROSI1.1e-18976.40Uncharacterized protein OS=Citrus clementina GN=CICLE_v10004849mg PE=4 SV=1[more]
W9S7I4_9ROSA1.2e-18866.27Uncharacterized protein OS=Morus notabilis GN=L484_015785 PE=4 SV=1[more]
A0A059DJY2_EUCGR7.1e-18666.74Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A02787 PE=4 SV=1[more]
BLAST of CmaCh18G012460 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G55630.16.0e-17663.66 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT3G60050.12.3e-17263.08 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT3G60040.17.8e-4356.21 F-box family protein[more]
AT3G16010.15.3e-3929.22 Pentatricopeptide repeat (PPR-like) superfamily protein[more]
AT5G65820.12.0e-3826.33 Pentatricopeptide repeat (PPR) superfamily protein[more]
BLAST of CmaCh18G012460 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659077478|ref|XP_008439226.1|1.5e-22980.46PREDICTED: pentatricopeptide repeat-containing protein At1g55630-like [Cucumis m... [more]
gi|449446161|ref|XP_004140840.1|2.7e-22679.20PREDICTED: pentatricopeptide repeat-containing protein At1g55630-like [Cucumis s... [more]
gi|645257085|ref|XP_008234250.1|1.3e-19367.62PREDICTED: pentatricopeptide repeat-containing protein At3g60050-like [Prunus mu... [more]
gi|596041207|ref|XP_007220061.1|3.1e-19073.54hypothetical protein PRUPE_ppa025794mg [Prunus persica][more]
gi|567858468|ref|XP_006421917.1|1.5e-18976.40hypothetical protein CICLE_v10004849mg [Citrus clementina][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh18G012460.1CmaCh18G012460.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 328..356
score: 2.
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 254..300
score: 3.3E-10coord: 358..406
score: 1.7
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 418..460
score: 0.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 361..394
score: 3.2E-7coord: 291..324
score: 2.6E-4coord: 257..289
score: 3.0E-6coord: 328..360
score: 5.1E-8coord: 396..429
score: 9.9
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 359..393
score: 11.498coord: 219..253
score: 6.697coord: 394..428
score: 14.666coord: 429..463
score: 8.583coord: 254..288
score: 11.794coord: 289..323
score: 9.46coord: 184..218
score: 6.621coord: 324..358
score: 10.26coord: 149..183
score: 8
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 362..458
score: 9.5E-5coord: 223..291
score: 9.
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 18..49
score: 1.1E-212coord: 124..463
score: 1.1E-212coord: 73..100
score: 1.1E
NoneNo IPR availablePANTHERPTHR24015:SF361SUBFAMILY NOT NAMEDcoord: 18..49
score: 1.1E-212coord: 73..100
score: 1.1E-212coord: 124..463
score: 1.1E
NoneNo IPR availableunknownSSF81901HCP-likecoord: 223..423
score: 2.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh18G012460Cucsa.107790Cucumber (Gy14) v1cgycmaB0249
CmaCh18G012460Cla006179Watermelon (97103) v1cmawmB373
CmaCh18G012460Csa3G182100Cucumber (Chinese Long) v2cmacuB408
CmaCh18G012460CSPI03G16930Wild cucumber (PI 183967)cmacpiB413
CmaCh18G012460CmoCh18G012690Cucurbita moschata (Rifu)cmacmoB406
CmaCh18G012460CmoCh16G001340Cucurbita moschata (Rifu)cmacmoB405
CmaCh18G012460Lsi05G012270Bottle gourd (USVL1VR-Ls)cmalsiB387
CmaCh18G012460Cp4.1LG09g00920Cucurbita pepo (Zucchini)cmacpeB415
CmaCh18G012460Cp4.1LG14g06120Cucurbita pepo (Zucchini)cmacpeB425
CmaCh18G012460CsaV3_3G017100Cucumber (Chinese Long) v3cmacucB0487
CmaCh18G012460Cla97C05G090090Watermelon (97103) v2cmawmbB424
CmaCh18G012460Bhi01G000962Wax gourdcmawgoB0507
CmaCh18G012460CsGy3G017010Cucumber (Gy14) v2cgybcmaB352
CmaCh18G012460Carg22100Silver-seed gourdcarcmaB1032
CmaCh18G012460Carg15136Silver-seed gourdcarcmaB1368
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh18G012460CmaCh16G001270Cucurbita maxima (Rimu)cmacmaB338
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh18G012460Watermelon (97103) v2cmawmbB403
CmaCh18G012460Watermelon (97103) v2cmawmbB429
CmaCh18G012460Wax gourdcmawgoB0509
CmaCh18G012460Cucurbita maxima (Rimu)cmacmaB253
CmaCh18G012460Cucurbita maxima (Rimu)cmacmaB396
CmaCh18G012460Cucurbita moschata (Rifu)cmacmoB416
CmaCh18G012460Cucumber (Chinese Long) v2cmacuB420
CmaCh18G012460Melon (DHL92) v3.5.1cmameB375
CmaCh18G012460Watermelon (Charleston Gray)cmawcgB352
CmaCh18G012460Watermelon (Charleston Gray)cmawcgB365
CmaCh18G012460Cucurbita pepo (Zucchini)cmacpeB453
CmaCh18G012460Bottle gourd (USVL1VR-Ls)cmalsiB386
CmaCh18G012460Cucumber (Gy14) v2cgybcmaB630
CmaCh18G012460Melon (DHL92) v3.6.1cmamedB432
CmaCh18G012460Melon (DHL92) v3.6.1cmamedB435
CmaCh18G012460Silver-seed gourdcarcmaB0996
CmaCh18G012460Cucumber (Chinese Long) v3cmacucB0502