CmaCh16G001270 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh16G001270
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionPentatricopeptide repeat-containing protein, putative
LocationCma_Chr16 : 576223 .. 578649 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACTCTTTATCGCTTGTGAGTTCGCGGATAGTCTGCAGATTGCTTCCACCTTCTTTTATTGTGCGTCGAGCAATCTGTAATCGGAGCTTTGGTGGTGATGATCGATTCGAATTTGTTGTGGAACCCAATAAGAAGAGGTTGGAGGGATCAGAGTTTGGTTACTTTACTGATGAAAATTCGGATTCCTGTGAGATTGGGAGTCGTAGAGGGGATGATCTGTCAATGAGAAGGGGTTTTCCAGAGGGTGCGAAAATTGATGCTGAAAAAGTTATTGAGATTCTCAAACAGGACGGTCCTGGATTTGACACATTATTGGCTTTGGATGAACTGCAACTACAGGTCTCAGGGGTTCTTGTTAGAGAAGTTCTGAAGGGGATTTTGAGAAGTGTAAATGTTCTAAACAAAACTCAATGTGCAAAATTGGGGTACAAGTTCTTCCTGTGGTCCGGTAAGGTCGAGAATTATCGACACACTGCGAGCTCGTATCATATGATCATGAAAATATTTGCTGAATGTGAGGAGTTCAAGGCTATGTGGAGGTTACTTGATGAGATGACTGAGAAAGGGTACCCTGTGACTGCAAGGACTTTTATGATATTGATATGTACCTGTGGTGATGCAGGCTTGGCTAGGAAAGTTGTCGAGAGGTTTATCAAATCAAAAACATTCAATTTTAGGCCGTTTAAACACTCTTATAATGCCATTCTTCATGGACTACTTGTGATAAAGCAGTACAAGTTGATTGAGTGGGTGTATCAGCAAATGCTGCTTGACGGTCACAGCTCAGACATTCTTACATATAATGTGGTGTTGTATGCAAGGTGCAAATTGGGGAAATTGGATCAGTTTCACAGATTGCTTGATGAAATGGCTAGAAATGGATTTTCTCCTGATAATCATACTTATAACATTCTTCTTTTTGTTCTTGGCAAAGGAGACAAACCTCTTGCAGCTCTAAATCTTTTGAACCACATGAGGGAAGTGGGTTTTGATCCGAGCATTCTTCACTTCACGACGCTTATCGATGGACTTAGTCGGGCTGGAAATTTGGATGCTTGCAAATATTTCTTTGATGAACTGGGAAACAAGGGGTGCATTCCTGATGTTGCTTGCTACACTGTGATGATCACAACTTACACAGTGGCTGGGGAGCATGAGAAAGCTAGGGAGCTTTTTGATGAGATGGTCATGAAGGGTCAGCTCCCGAATGTATTGACGTACAACTCCATGATTCGCGGTTTTTGTATGGCGGGTAAGTTCGATGAGGCTTACTCGATGCTGGCTGAAATGGAAACTCGTGGTTGCAGACCAAATTTTGTTGTATATAGTACCCTTGTAAGCTATTTGCGAAATGCTGGAAAGCTTTCTGAGGCTCATAAAGTTATAACGCGCATGGTGGAGAAGGGGCAATACGCCCATTTAGTGACGAAATTCAGGGGATATAGGAGATGCTAGATCATTAGGAAGAACTTTTGTAATTGAAGATTATTAGTTAATAAGCAAATGAGAAATTCAATTGCCAGTTTGTCCAGTCCTTATGCTCCTTTTACATTGATTCTTTGAGACTGTTGAAGATGAAGTTTTATATAGCTTAGTAATATGGTTGTGAACAGAACTGCCGTCATTTTTTAATGCTGTTGCTGCTGCTGATTCAGGTTCCCCAAAACTCACCCCCCCCCGTTTTTGCTGTTTAGTTTGGTCTCTGGTTTGAGTGAGTCATGTAAATTATCGTCAAACCAAAAAGAGTAGAGCTTGGCGAAAATTAACGTGAAAATAAAGACATCTCAGTATGCATTTAGAGTTAGTTCGTAGACATGTCTTGTAACAGTCCAAGCCCATCATTAATCGGTATTGTCTTATTTGGACTTTTTCTTTCGAGTTTTTTCTCGATGTCTTTAAAATGCGTCTCCTAGGAAGAAGTTTTTACACCCTTATACAAATTGTTTCGTTCTTCATCCTCATTGACACTCGTTCCCCTCCTCCCAATCAGTATAGAATCTCACAATCTATCTTCCTTTTGGGACTCATAGGCGGTGACCCAGTGTCTAATACCAACGGGTAATAGTCTAAGTCCATCTTTACCACATATTTTCATATTTGTGATTTTCTCTTTTTTGAATTTCTATTAAGGAGAAATTTTCATGGTTGTCTGAGATTGAACAATGTCTATATCCCTTCTTAAAATGTAAGTGTCTAAGATAGGACTAATTTAAAATCTGTATTTTATTTCTTCAATCGTTGGCCTCTCTCTCTCTCTCTCTCACCATCCGTCCTTAACGACTTCAATCCTGTTTTTTCAACCATCCCTCATCTTTAATCCCTCCAAAATTTCCCACTATAAAAACAACTACAAAAACTTCATTCTCTCAACCATTCTCTATCTAGATCCCTGAACTCGCCGGACGCCAGCTCCGGTGGGTCTGA

mRNA sequence

ATGAACTCTTTATCGCTTGTGAGTTCGCGGATAGTCTGCAGATTGCTTCCACCTTCTTTTATTGTGCGTCGAGCAATCTGTAATCGGAGCTTTGGTGGTGATGATCGATTCGAATTTGTTGTGGAACCCAATAAGAAGAGGTTGGAGGGATCAGAGTTTGGTTACTTTACTGATGAAAATTCGGATTCCTGTGAGATTGGGAGTCGTAGAGGGGATGATCTGTCAATGAGAAGGGGTTTTCCAGAGGGTGCGAAAATTGATGCTGAAAAAGTTATTGAGATTCTCAAACAGGACGGTCCTGGATTTGACACATTATTGGCTTTGGATGAACTGCAACTACAGGTCTCAGGGGTTCTTGTTAGAGAAGTTCTGAAGGGGATTTTGAGAAGTGTAAATGTTCTAAACAAAACTCAATGTGCAAAATTGGGGTACAAGTTCTTCCTGTGGTCCGGTAAGGTCGAGAATTATCGACACACTGCGAGCTCGTATCATATGATCATGAAAATATTTGCTGAATGTGAGGAGTTCAAGGCTATGTGGAGGTTACTTGATGAGATGACTGAGAAAGGGTACCCTGTGACTGCAAGGACTTTTATGATATTGATATGTACCTGTGGTGATGCAGGCTTGGCTAGGAAAGTTGTCGAGAGGTTTATCAAATCAAAAACATTCAATTTTAGGCCGTTTAAACACTCTTATAATGCCATTCTTCATGGACTACTTGTGATAAAGCAGTACAAGTTGATTGAGTGGGTGTATCAGCAAATGCTGCTTGACGGTCACAGCTCAGACATTCTTACATATAATGTGGTGTTGTATGCAAGGTGCAAATTGGGGAAATTGGATCAGTTTCACAGATTGCTTGATGAAATGGCTAGAAATGGATTTTCTCCTGATAATCATACTTATAACATTCTTCTTTTTGTTCTTGGCAAAGGAGACAAACCTCTTGCAGCTCTAAATCTTTTGAACCACATGAGGGAAGTGGGTTTTGATCCGAGCATTCTTCACTTCACGACGCTTATCGATGGACTTAGTCGGGCTGGAAATTTGGATGCTTGCAAATATTTCTTTGATGAACTGGGAAACAAGGGGTGCATTCCTGATGTTGCTTGCTACACTGTGATGATCACAACTTACACAGTGGCTGGGGAGCATGAGAAAGCTAGGGAGCTTTTTGATGAGATGGTCATGAAGGGTCAGCTCCCGAATGTATTGACGTACAACTCCATGATTCGCGGTTTTTGTATGGCGGGTAAGTTCGATGAGGCTTACTCGATGCTGGCTGAAATGGAAACTCGTGGTTGCAGACCAAATTTTGTTGTATATAGTACCCTTGTAAGCTATTTGCGAAATGCTGGAAAGCTTTCTGAGGCTCATAAAGTTATAACGCGCATGGTGGAGAAGGGGCAATACGCCCATTTAATCCCTGAACTCGCCGGACGCCAGCTCCGGTGGGTCTGA

Coding sequence (CDS)

ATGAACTCTTTATCGCTTGTGAGTTCGCGGATAGTCTGCAGATTGCTTCCACCTTCTTTTATTGTGCGTCGAGCAATCTGTAATCGGAGCTTTGGTGGTGATGATCGATTCGAATTTGTTGTGGAACCCAATAAGAAGAGGTTGGAGGGATCAGAGTTTGGTTACTTTACTGATGAAAATTCGGATTCCTGTGAGATTGGGAGTCGTAGAGGGGATGATCTGTCAATGAGAAGGGGTTTTCCAGAGGGTGCGAAAATTGATGCTGAAAAAGTTATTGAGATTCTCAAACAGGACGGTCCTGGATTTGACACATTATTGGCTTTGGATGAACTGCAACTACAGGTCTCAGGGGTTCTTGTTAGAGAAGTTCTGAAGGGGATTTTGAGAAGTGTAAATGTTCTAAACAAAACTCAATGTGCAAAATTGGGGTACAAGTTCTTCCTGTGGTCCGGTAAGGTCGAGAATTATCGACACACTGCGAGCTCGTATCATATGATCATGAAAATATTTGCTGAATGTGAGGAGTTCAAGGCTATGTGGAGGTTACTTGATGAGATGACTGAGAAAGGGTACCCTGTGACTGCAAGGACTTTTATGATATTGATATGTACCTGTGGTGATGCAGGCTTGGCTAGGAAAGTTGTCGAGAGGTTTATCAAATCAAAAACATTCAATTTTAGGCCGTTTAAACACTCTTATAATGCCATTCTTCATGGACTACTTGTGATAAAGCAGTACAAGTTGATTGAGTGGGTGTATCAGCAAATGCTGCTTGACGGTCACAGCTCAGACATTCTTACATATAATGTGGTGTTGTATGCAAGGTGCAAATTGGGGAAATTGGATCAGTTTCACAGATTGCTTGATGAAATGGCTAGAAATGGATTTTCTCCTGATAATCATACTTATAACATTCTTCTTTTTGTTCTTGGCAAAGGAGACAAACCTCTTGCAGCTCTAAATCTTTTGAACCACATGAGGGAAGTGGGTTTTGATCCGAGCATTCTTCACTTCACGACGCTTATCGATGGACTTAGTCGGGCTGGAAATTTGGATGCTTGCAAATATTTCTTTGATGAACTGGGAAACAAGGGGTGCATTCCTGATGTTGCTTGCTACACTGTGATGATCACAACTTACACAGTGGCTGGGGAGCATGAGAAAGCTAGGGAGCTTTTTGATGAGATGGTCATGAAGGGTCAGCTCCCGAATGTATTGACGTACAACTCCATGATTCGCGGTTTTTGTATGGCGGGTAAGTTCGATGAGGCTTACTCGATGCTGGCTGAAATGGAAACTCGTGGTTGCAGACCAAATTTTGTTGTATATAGTACCCTTGTAAGCTATTTGCGAAATGCTGGAAAGCTTTCTGAGGCTCATAAAGTTATAACGCGCATGGTGGAGAAGGGGCAATACGCCCATTTAATCCCTGAACTCGCCGGACGCCAGCTCCGGTGGGTCTGA

Protein sequence

MNSLSLVSSRIVCRLLPPSFIVRRAICNRSFGGDDRFEFVVEPNKKRLEGSEFGYFTDENSDSCEIGSRRGDDLSMRRGFPEGAKIDAEKVIEILKQDGPGFDTLLALDELQLQVSGVLVREVLKGILRSVNVLNKTQCAKLGYKFFLWSGKVENYRHTASSYHMIMKIFAECEEFKAMWRLLDEMTEKGYPVTARTFMILICTCGDAGLARKVVERFIKSKTFNFRPFKHSYNAILHGLLVIKQYKLIEWVYQQMLLDGHSSDILTYNVVLYARCKLGKLDQFHRLLDEMARNGFSPDNHTYNILLFVLGKGDKPLAALNLLNHMREVGFDPSILHFTTLIDGLSRAGNLDACKYFFDELGNKGCIPDVACYTVMITTYTVAGEHEKARELFDEMVMKGQLPNVLTYNSMIRGFCMAGKFDEAYSMLAEMETRGCRPNFVVYSTLVSYLRNAGKLSEAHKVITRMVEKGQYAHLIPELAGRQLRWV
Homology
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BLAST of CmaCh16G001270 vs. Swiss-Prot
Match: PPR81_ARATH (Pentatricopeptide repeat-containing protein At1g55630 OS=Arabidopsis thaliana GN=At1g55630 PE=2 SV=1)

HSP 1 Score: 598.2 bits (1541), Expect = 8.1e-170
Identity = 294/479 (61.38%), Postives = 358/479 (74.74%), Query Frame = 1 

Query: 1   MNSLSLVSSRIVCRLLPPSFIVRRAICNRSFGGDDRFEFVVEPNKKRLEGSEFGYFTDEN 60
           MNS+   S+ +  R         R  CN S GGD       EP K   E SE     D+ 
Sbjct: 1   MNSVIHYSTSVAVRKASRFLFTSRKFCNGSIGGDVTDNGTEEPLKITWESSEMDCEFDQE 60

Query: 61  SDSCEIGSRRGDDLSMRRGFPEGAKIDAEKVIEILKQDGPGFDTLLALDELQLQVSGVLV 120
            +        G+ +S+R+ F E  K+ A +V++ L+QD PGF+T  ALDEL + +SG+LV
Sbjct: 61  EN--------GEKISVRKRFMESTKLSASRVLDTLQQDCPGFNTKSALDELNVSISGLLV 120

Query: 121 REVLKGILRSVNVLNKTQCAKLGYKFFLWSGKVENYRHTASSYHMIMKIFAECEEFKAMW 180
           REVL GILR+++  NKT+CAKL YKFF+W G  EN+RHTA+ YH++MKIFAEC E+KAM 
Sbjct: 121 REVLVGILRTLSFDNKTRCAKLAYKFFVWCGGQENFRHTANCYHLLMKIFAECGEYKAMC 180

Query: 181 RLLDEMTEKGYPVTARTFMILICTCGDAGLARKVVERFIKSKTFNFRPFKHSYNAILHGL 240
           RL+DEM + GYP TA TF +LICTCG+AGLAR VVE+FIKSKTFN+RP+KHSYNAILH L
Sbjct: 181 RLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSL 240

Query: 241 LVIKQYKLIEWVYQQMLLDGHSSDILTYNVVLYARCKLGKLDQFHRLLDEMARNGFSPDN 300
           L +KQYKLI+WVY+QML DG + D+LTYN+V++A  +LGK D+ +RLLDEM ++GFSPD 
Sbjct: 241 LGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDL 300

Query: 301 HTYNILLFVLGKGDKPLAALNLLNHMREVGFDPSILHFTTLIDGLSRAGNLDACKYFFDE 360
           +TYNILL  L  G+KPLAALNLLNHMREVG +P ++HFTTLIDGLSRAG L+ACKYF DE
Sbjct: 301 YTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDE 360

Query: 361 LGNKGCIPDVACYTVMITTYTVAGEHEKARELFDEMVMKGQLPNVLTYNSMIRGFCMAGK 420
               GC PDV CYTVMIT Y   GE EKA E+F EM  KGQLPNV TYNSMIRGFCMAGK
Sbjct: 361 TVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGK 420

Query: 421 FDEAYSMLAEMETRGCRPNFVVYSTLVSYLRNAGKLSEAHKVITRMVEKGQYAHLIPEL 480
           F EA ++L EME+RGC PNFVVYSTLV+ L+NAGK+ EAH+V+  MVEKG Y HLI +L
Sbjct: 421 FKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKGHYVHLISKL 471

[Close]
BLAST of CmaCh16G001270 vs. Swiss-Prot
Match: PP288_ARATH (Pentatricopeptide repeat-containing protein At3g60050 OS=Arabidopsis thaliana GN=At3g60050 PE=2 SV=1)

HSP 1 Score: 589.7 bits (1519), Expect = 2.9e-167
Identity = 289/477 (60.59%), Postives = 365/477 (76.52%), Query Frame = 1 

Query: 3   SLSLVSSRIVCRLLPPSFIVRRAICNRSFGGDDRFEFVVEPNKKRLEGSEFGYFTDENSD 62
           +L+LV    V R       + R  CN +FGG++                + G+  DE+S+
Sbjct: 2   NLALVLGTNVVRKAYRFLFISRKFCNGNFGGNEI--------DNGFPDLDCGF--DEDSN 61

Query: 63  SCEIGSRRGDDLSMRRGFPEGAKIDAEKVIEILKQDGPGFDTLLALDELQLQVSGVLVRE 122
             E+ S   + +S+R  F E A   A +V+  L+ D  GF++   LDEL ++VSG+LVRE
Sbjct: 62  ISELRSIDREVISVRSRFLESANHSASRVLVTLQLDESGFNSKSVLDELNVRVSGLLVRE 121

Query: 123 VLKGILRSVNVLNKTQCAKLGYKFFLWSGKVENYRHTASSYHMIMKIFAECEEFKAMWRL 182
           VL GILR+++  NK +CAKL Y+FFLWSG+ E +RHT +SYH++MKIFAEC E+KAMWRL
Sbjct: 122 VLVGILRNLSYDNKARCAKLAYRFFLWSGEQECFRHTVNSYHLLMKIFAECGEYKAMWRL 181

Query: 183 LDEMTEKGYPVTARTFMILICTCGDAGLARKVVERFIKSKTFNFRPFKHSYNAILHGLLV 242
           +DEM + G+P TARTF +LIC+CG+AGLA++ V +F+KSKTFN+RPFKHSYNAIL+ LL 
Sbjct: 182 VDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLG 241

Query: 243 IKQYKLIEWVYQQMLLDGHSSDILTYNVVLYARCKLGKLDQFHRLLDEMARNGFSPDNHT 302
           +KQYKLIEWVY+QML DG S D+LTYN++L+   +LGK+D+F RL DEMAR+GFSPD++T
Sbjct: 242 VKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYT 301

Query: 303 YNILLFVLGKGDKPLAALNLLNHMREVGFDPSILHFTTLIDGLSRAGNLDACKYFFDELG 362
           YNILL +LGKG+KPLAAL  LNHM+EVG DPS+LH+TTLIDGLSRAGNL+ACKYF DE+ 
Sbjct: 302 YNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMV 361

Query: 363 NKGCIPDVACYTVMITTYTVAGEHEKARELFDEMVMKGQLPNVLTYNSMIRGFCMAGKFD 422
             GC PDV CYTVMIT Y V+GE +KA+E+F EM +KGQLPNV TYNSMIRG CMAG+F 
Sbjct: 362 KAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFR 421

Query: 423 EAYSMLAEMETRGCRPNFVVYSTLVSYLRNAGKLSEAHKVITRMVEKGQYAHLIPEL 480
           EA  +L EME+RGC PNFVVYSTLVSYLR AGKLSEA KVI  MV+KG Y HL+P++
Sbjct: 422 EACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKGHYVHLVPKM 468

[Close]
BLAST of CmaCh16G001270 vs. Swiss-Prot
Match: PP391_ARATH (Pentatricopeptide repeat-containing protein At5g18390, mitochondrial OS=Arabidopsis thaliana GN=At5g18390 PE=2 SV=2)

HSP 1 Score: 160.2 bits (404), Expect = 5.6e-38
Identity = 98/365 (26.85%), Postives = 172/365 (47.12%), Query Frame = 1 

Query: 107 ALDELQLQVSGVLVREVLKGILRSVNVLNKTQCAKLGYKFFLWSGKVENYRHTASSYHMI 166
           +L+ L+L V+   V  VL+   RS N            +FF W+    +Y  T+  Y  +
Sbjct: 67  SLNSLRLPVTSEFVFRVLRATSRSSND---------SLRFFNWARSNPSYTPTSMEYEEL 126

Query: 167 MKIFAECEEFKAMWRLLDEMTEKGYPVTARTFMILICTCGDAGLARKVVERFIK-SKTFN 226
            K  A  +++++MW++L +M +    ++  T   +I   G  G   + VE F    KT  
Sbjct: 127 AKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLG 186

Query: 227 FRPFKHSYNAILHGLLVIKQYKLIEWVYQQMLLDGHSSDILTYNVVLYARCKLGKLDQFH 286
            +     YN++LH L  +K +     + ++M+  G   D  TY +++   C  GK+ +  
Sbjct: 187 CQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQ 246

Query: 287 RLLDEMARNGFSPDNHTYNILLFVLGKGDKPLAALNLLNHMREVGFDPSILHFTTLIDGL 346
             LDEM+R GF+P     ++L+  L       +A  +++ M + GF P I  F  LI+ +
Sbjct: 247 EFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAI 306

Query: 347 SRAGNLDACKYFFDELGNKGCIPDVACYTVMITTYTVAGEHEKARELFDEMVMKGQLPNV 406
           S++G ++ C   +      G   D+  Y  +I   +  G+ ++A  L +  V  G  P  
Sbjct: 307 SKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFP 366

Query: 407 LTYNSMIRGFCMAGKFDEAYSMLAEMETRGCRPNFVVYSTLVSYLRNAGKLSEAHKVITR 466
             Y  +I+G C  G FD+A+S  ++M+ +   PN  VY+ L++     GK  +A   +  
Sbjct: 367 SLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVE 422

Query: 467 MVEKG 471
           M E G
Sbjct: 427 MTEMG 422

[Close]
BLAST of CmaCh16G001270 vs. Swiss-Prot
Match: PP447_ARATH (Putative pentatricopeptide repeat-containing protein At5g65820 OS=Arabidopsis thaliana GN=At5g65820 PE=3 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 1.2e-37
Identity = 103/386 (26.68%), Postives = 183/386 (47.41%), Query Frame = 1 

Query: 87  DAEKVIEILKQDGPGFDTLLALDELQLQVSGVLVREVLKGILRSVNVLNKT-QCAKLGYK 146
           D EK   IL++    F + +   EL L  SGV   E+  G++    VLN+      LGY+
Sbjct: 82  DVEKSYRILRK----FHSRVPKLELALNESGV---ELRPGLIE--RVLNRCGDAGNLGYR 141

Query: 147 FFLWSGKVENYRHTASSYHMIMKIFAECEEFKAMWRLLDEM-TEKGYPVTARTFMILICT 206
           FF+W+ K   Y H+   Y  ++KI ++  +F A+W L++EM  E    +    F++L+  
Sbjct: 142 FFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQR 201

Query: 207 CGDAGLARKVVERFIKSKTFNFRPFKHSYNAILHGLLVIKQYKLIEWVYQQMLLDGHSSD 266
              A + +K +E   +   F F P ++ +  +L  L      K    +++ M +     +
Sbjct: 202 FASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRM-RFPVN 261

Query: 267 ILTYNVVLYARCKLGKLDQFHRLLDEMARNGFSPDNHTYNILLFVLGKGDKPLAALNLLN 326
           +  +  +LY  C++GK+ +   +L +M   GF PD   Y  LL       K   A +LL 
Sbjct: 262 LRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLR 321

Query: 327 HMREVGFDPSILHFTTLIDGLSRAGNLDACKYFFDELGNKGCIPDVACYTVMITTYTVAG 386
            MR  GF+P+   +T LI  L +   ++     F E+    C  DV  YT +++ +   G
Sbjct: 322 DMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWG 381

Query: 387 EHEKARELFDEMVMKGQLPNVLTYNSMIRGFCMAGKFDEAYSMLAEMETRGCRPNFVVYS 446
           + +K   + D+M+ KG +P+ LTY  ++        F+E   ++ +M      P+  +Y+
Sbjct: 382 KIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYN 441

Query: 447 TLVSYLRNAGKLSEAHKVITRMVEKG 471
            ++      G++ EA ++   M E G
Sbjct: 442 VVIRLACKLGEVKEAVRLWNEMEENG 457

[Close]
BLAST of CmaCh16G001270 vs. Swiss-Prot
Match: PP236_ARATH (Pentatricopeptide repeat-containing protein At3g16010 OS=Arabidopsis thaliana GN=At3g16010 PE=2 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 2.1e-37
Identity = 110/385 (28.57%), Postives = 182/385 (47.27%), Query Frame = 1 

Query: 89  EKVIEILKQDGPGFDTLLALDELQLQVSGVLVREVLKGILRSVNVLNKTQCAKLGYKFFL 148
           E+ I I+K    G D   AL+ L+L+V   LVR +L+ I   +NV           +FF 
Sbjct: 65  ERFIRIVKIFKWGPDAEKALEVLKLKVDHRLVRSILE-IDVEINVK---------IQFFK 124

Query: 149 WSGKVENYRHTASSYHMIMKIFAECEEFKAMWRLLDEMTEKGY-PVTARTFMILICTCGD 208
           W+GK  N++H  S+Y  +++   E   +  M+R + E+    Y  V+      L+   G 
Sbjct: 125 WAGKRRNFQHDCSTYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELVKALGR 184

Query: 209 AGLARKVVERFIKSKTFNFRPFKHSYNAILHGLLVIKQYKLIEWVYQQMLLDGHS-SDIL 268
           A +  K +  F ++K    +P   +YN+++  L+   Q++ +  VY +M  +G    D +
Sbjct: 185 AKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTI 244

Query: 269 TYNVVLYARCKLGKLDQFHRLLDEMARNGFSPDNHTYNILLFVLGKGDKPLAALNLLNHM 328
           TY+ ++ +  KLG+ D   RL DEM  N   P    Y  LL +  K  K   AL+L   M
Sbjct: 245 TYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEM 304

Query: 329 REVGFDPSILHFTTLIDGLSRAGNLDACKYFFDELGNKGCIPDVACYTVMITTYTVAGEH 388
           +  G  P++  +T LI GL +AG +D    F+ ++   G  PDV     ++      G  
Sbjct: 305 KRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRV 364

Query: 389 EKARELFDEMVMKGQLPNVLTYNSMIRG-FCMAGKFDEAYSMLAEMETRGCRPNFVVYST 448
           E+   +F EM M    P V++YN++I+  F       E  S   +M+     P+   YS 
Sbjct: 365 EELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSI 424

Query: 449 LVSYLRNAGKLSEAHKVITRMVEKG 471
           L+       ++ +A  ++  M EKG
Sbjct: 425 LIDGYCKTNRVEKALLLLEEMDEKG 439

[Close]
BLAST of CmaCh16G001270 vs. TrEMBL
Match: A0A0A0L8P4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G182100 PE=4 SV=1)

HSP 1 Score: 803.1 bits (2073), Expect = 1.8e-229
Identity = 389/481 (80.87%), Postives = 425/481 (88.36%), Query Frame = 1 

Query: 1   MNSLSLVSSRIVCRLLPPSFIVRRAICNRSFGGDDRFEFVVEPNKKRLEGSEFGYFTDEN 60
           MNSLSLVSSRIVCRL   SFIVRR I NR+F  DDRF+F VEP         F Y  D N
Sbjct: 1   MNSLSLVSSRIVCRLFSTSFIVRRTIWNRNFCSDDRFQFFVEP---------FSYLADGN 60

Query: 61  SDSCEIGSRRGDDLSMRRGFPEGAKIDAEKVIEILKQDGPGFDTLLALDELQLQVSGVLV 120
           SDS E  SRR DD S RR F + AKIDAEKVIEILKQDGPGFDT LALDELQL+VSGVLV
Sbjct: 61  SDSFETDSRRWDDFSFRRSFLKDAKIDAEKVIEILKQDGPGFDTFLALDELQLKVSGVLV 120

Query: 121 REVLKGILRSVNVLNKTQCAKLGYKFFLWSGKVENYRHTASSYHMIMKIFAECEEFKAMW 180
            EVLKGIL+S +VLNKTQCAKLGYKFF+WSG++ENYRHT +SYH+IMKIFAECEEFKAMW
Sbjct: 121 GEVLKGILKSKSVLNKTQCAKLGYKFFIWSGRIENYRHTVNSYHIIMKIFAECEEFKAMW 180

Query: 181 RLLDEMTEKGYPVTARTFMILICTCGDAGLARKVVERFIKSKTFNFRPFKHSYNAILHGL 240
           R+LDEMTEKGYPVTARTFMILICTCG+AGLA++VVERFIKSKTFNFRP+KHSYNAILHGL
Sbjct: 181 RVLDEMTEKGYPVTARTFMILICTCGEAGLAKRVVERFIKSKTFNFRPYKHSYNAILHGL 240

Query: 241 LVIKQYKLIEWVYQQMLLDGHSSDILTYNVVLYARCKLGKLDQFHRLLDEMARNGFSPDN 300
           +++KQYKLI WVY QMLLD HS DILTYNV+L++ CKLGKLDQFHRLLDEMAR GFSPD 
Sbjct: 241 VIVKQYKLIGWVYDQMLLDDHSPDILTYNVLLFSSCKLGKLDQFHRLLDEMARKGFSPDF 300

Query: 301 HTYNILLFVLGKGDKPLAALNLLNHMREVGFDPSILHFTTLIDGLSRAGNLDACKYFFDE 360
           HTYNILL+VLGKGDKPLAALNLLNHMREVGF P++LHFTTLI+GLSRAGNLDACKYFFDE
Sbjct: 301 HTYNILLYVLGKGDKPLAALNLLNHMREVGFGPNVLHFTTLINGLSRAGNLDACKYFFDE 360

Query: 361 LGNKGCIPDVACYTVMITTYTVAGEHEKARELFDEMVMKGQLPNVLTYNSMIRGFCMAGK 420
           LGN GCIPDV CYTVMIT++T AG+HEKAR  FDEM+MKGQLPNV TYNSMIRGFCM GK
Sbjct: 361 LGNNGCIPDVVCYTVMITSFTEAGQHEKARAFFDEMIMKGQLPNVFTYNSMIRGFCMVGK 420

Query: 421 FDEAYSMLAEMETRGCRPNFVVYSTLVSYLRNAGKLSEAHKVITRMVEKGQYAHLIPELA 480
           F EAYSML+EME+RGCRPNF+VYSTLVSYLRNAGKL EAHKVI +MVE GQYAHL+ +  
Sbjct: 421 FKEAYSMLSEMESRGCRPNFLVYSTLVSYLRNAGKLGEAHKVIKQMVENGQYAHLMTKFK 472

Query: 481 G 482
           G
Sbjct: 481 G 472

[Close]
BLAST of CmaCh16G001270 vs. TrEMBL
Match: M5XQE6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025794mg PE=4 SV=1)

HSP 1 Score: 666.8 bits (1719), Expect = 2.1e-188
Identity = 316/440 (71.82%), Postives = 372/440 (84.55%), Query Frame = 1 

Query: 42  EPNKKRLEGSEFGYFTDENSDSCEIGSRRGDDLSMRRGFPEGAKIDAEKVIEILKQDGPG 101
           EP K+    S+F    DE  +  E  +R  +  S+RR F E AKI   +V+E+L+QDGPG
Sbjct: 3   EPLKRIWRSSDFDSVLDEKQNVPEYENRPREYFSLRRSFFENAKIHTRRVLEVLQQDGPG 62

Query: 102 FDTLLALDELQLQVSGVLVREVLKGILRSVNVLNKTQCAKLGYKFFLWSGKVENYRHTAS 161
           FDT  ALDEL ++VSG+LVREVL  IL+ VN  +K +CAKLGYKFF+WSG++ENYRHTA+
Sbjct: 63  FDTKAALDELHIEVSGLLVREVLFKILKQVNYASKMRCAKLGYKFFVWSGQLENYRHTAN 122

Query: 162 SYHMIMKIFAECEEFKAMWRLLDEMTEKGYPVTARTFMILICTCGDAGLARKVVERFIKS 221
           +YH++MKIFA+CEEFKAMWRL+DEM EKGYP TA+TF ILICTCG+AGLA+KVVERFIKS
Sbjct: 123 TYHLMMKIFADCEEFKAMWRLVDEMIEKGYPTTAQTFNILICTCGEAGLAKKVVERFIKS 182

Query: 222 KTFNFRPFKHSYNAILHGLLVIKQYKLIEWVYQQMLLDGHSSDILTYNVVLYARCKLGKL 281
           KTFN+RPFKHSYNAILH L+V+KQYKLIEWVYQQML DGH +DILTYNV++YA+ +LGKL
Sbjct: 183 KTFNYRPFKHSYNAILHSLVVVKQYKLIEWVYQQMLADGHCTDILTYNVMMYAKYRLGKL 242

Query: 282 DQFHRLLDEMARNGFSPDNHTYNILLFVLGKGDKPLAALNLLNHMREVGFDPSILHFTTL 341
           DQFHRLL+EM R+GF+PD HTYNILL VLGKGDKPLAALNLLNHM+EVG DPS+LHFTTL
Sbjct: 243 DQFHRLLEEMGRSGFAPDLHTYNILLHVLGKGDKPLAALNLLNHMKEVGLDPSVLHFTTL 302

Query: 342 IDGLSRAGNLDACKYFFDELGNKGCIPDVACYTVMITTYTVAGEHEKARELFDEMVMKGQ 401
           IDGLSR+GNLDACKYFFDE+    C PDV CYTVMI+ Y VAGE EKA+ +FDEM+  GQ
Sbjct: 303 IDGLSRSGNLDACKYFFDEMIKHECFPDVVCYTVMISGYIVAGELEKAQGVFDEMIPNGQ 362

Query: 402 LPNVLTYNSMIRGFCMAGKFDEAYSMLAEMETRGCRPNFVVYSTLVSYLRNAGKLSEAHK 461
           LPNV TYN+MIRG CMAGKF+EA SML +ME+RGC PNF VYSTLVSYLRNAGKL++AH+
Sbjct: 363 LPNVFTYNAMIRGLCMAGKFEEACSMLKDMESRGCNPNFTVYSTLVSYLRNAGKLAKAHE 422

Query: 462 VITRMVEKGQYAHLIPELAG 482
           VIT MVEKGQY HL+ +  G
Sbjct: 423 VITHMVEKGQYTHLLSKFKG 442

[Close]
BLAST of CmaCh16G001270 vs. TrEMBL
Match: W9S7I4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_015785 PE=4 SV=1)

HSP 1 Score: 664.5 bits (1713), Expect = 1.0e-187
Identity = 322/474 (67.93%), Postives = 380/474 (80.17%), Query Frame = 1 

Query: 11  IVCRLLPPSFIVRRAICNRSF---GGDDRFEFVVEPNKKRLEGSEFGYFTDENSDSCEIG 70
           +V ++   S +V R  CNRSF    G++ ++   EP K+  + S F    DE SD     
Sbjct: 21  VVSKVTLSSLVVIRNFCNRSFDGVNGENGYDCFEEPLKRMWKSSYFDSDMDEQSDFYSRE 80

Query: 71  SRRGDDLSMRRGFPEGAKIDAEKVIEILKQDGPGFDTLLALDELQLQVSGVLVREVLKGI 130
                + S+R+ F E A+IDA +V+E+L+QDGPGFD   ALDEL ++VSG+LVR+VL GI
Sbjct: 81  MPARGNFSVRQSFFETARIDAGRVLEVLQQDGPGFDAKPALDELNIRVSGLLVRKVLLGI 140

Query: 131 LRSVNVLNKTQCAKLGYKFFLWSGKVENYRHTASSYHMIMKIFAECEEFKAMWRLLDEMT 190
           L +++  NK +CAKLG+KFF WSG+  NYRHTA+SYH+++KIFAECEEFKAMWRL+DEM 
Sbjct: 141 LSNISHTNKIRCAKLGFKFFTWSGQQGNYRHTANSYHLLIKIFAECEEFKAMWRLVDEMI 200

Query: 191 EKGYPVTARTFMILICTCGDAGLARKVVERFIKSKTFNFRPFKHSYNAILHGLLVIKQYK 250
           E+G+P TART  ILICTCG+AGLARKVVERFIKSKTFNFRPFKHSYNAILH LLV  QYK
Sbjct: 201 ERGFPTTARTLNILICTCGEAGLARKVVERFIKSKTFNFRPFKHSYNAILHCLLVTNQYK 260

Query: 251 LIEWVYQQMLLDGHSSDILTYNVVLYARCKLGKLDQFHRLLDEMARNGFSPDNHTYNILL 310
           LIEWVYQQML DG S DILTYNV++  + +LGKLDQFHRLLDEM R GFSPD HTYNILL
Sbjct: 261 LIEWVYQQMLADGFSPDILTYNVLMLTKYRLGKLDQFHRLLDEMGRRGFSPDLHTYNILL 320

Query: 311 FVLGKGDKPLAALNLLNHMREVGFDPSILHFTTLIDGLSRAGNLDACKYFFDELGNKGCI 370
            VLGKGDKPLAALNLLNHM+E G DP +LHFTTLIDGLSRAGNLDAC++FFDE+   GCI
Sbjct: 321 HVLGKGDKPLAALNLLNHMKETGIDPGVLHFTTLIDGLSRAGNLDACRFFFDEMPKNGCI 380

Query: 371 PDVACYTVMITTYTVAGEHEKARELFDEMVMKGQLPNVLTYNSMIRGFCMAGKFDEAYSM 430
           PDV CYTVMIT Y VAGE EKA+ +FDEM+ KGQ+PNV TYNSMIRG CMAGKF+EA SM
Sbjct: 381 PDVVCYTVMITGYVVAGELEKAQSIFDEMITKGQIPNVFTYNSMIRGLCMAGKFEEACSM 440

Query: 431 LAEMETRGCRPNFVVYSTLVSYLRNAGKLSEAHKVITRMVEKGQYAHLIPELAG 482
           L +ME+RGC PNF+VY+TLVS LRNAGKLSEAH+V+  MVEKGQY HL+ +  G
Sbjct: 441 LKDMESRGCNPNFLVYTTLVSNLRNAGKLSEAHQVVKHMVEKGQYVHLLSKFKG 494

[Close]
BLAST of CmaCh16G001270 vs. TrEMBL
Match: V4S4A4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10004849mg PE=4 SV=1)

HSP 1 Score: 662.1 bits (1707), Expect = 5.1e-187
Identity = 326/479 (68.06%), Postives = 384/479 (80.17%), Query Frame = 1 

Query: 1   MNSLSLVSSRIVCRLLPPSFIVRRAICNRSFGG---DDRFEFVVEPNKKRLEGSEFGYFT 60
           MNS++L  SRIV ++ P   ++ R  C+ S  G   D+ F  + E      E S F    
Sbjct: 1   MNSVALFGSRIVNKV-PFFLVLSRKFCDYSGDGGKTDNGFSCIEETLTDIWESSNFDATM 60

Query: 61  DENSDSCEIGSRRGDDLSMRRGFPEGAKIDAEKVIEILKQDGPGFDTLLALDELQLQVSG 120
           + N    +         S+RR F +  K DA +V+EIL+ DGPGFD  L L E  ++VS 
Sbjct: 61  NGNGGLHDYQRTAEAQFSIRRMFLDNVKFDASRVLEILQNDGPGFDAKLVLSESGIRVSE 120

Query: 121 VLVREVLKGILRSVNVLNKTQCAKLGYKFFLWSGKVENYRHTASSYHMIMKIFAECEEFK 180
           +LVREVL GILRSVN  +KT+CAKLGYKFF+WSG+ EN+RHTA+SYH+IMKIFA+CEEFK
Sbjct: 121 ILVREVLSGILRSVNYADKTKCAKLGYKFFVWSGQQENFRHTANSYHLIMKIFADCEEFK 180

Query: 181 AMWRLLDEMTEKGYPVTARTFMILICTCGDAGLARKVVERFIKSKTFNFRPFKHSYNAIL 240
           AMWRL+DEM E G+P TARTF ILICTCG+ GLARKVVERFIKSK FNFRPFK+SYNAIL
Sbjct: 181 AMWRLVDEMIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAIL 240

Query: 241 HGLLVIKQYKLIEWVYQQMLLDGHSSDILTYNVVLYARCKLGKLDQFHRLLDEMARNGFS 300
           H LL I+QYKLIEWVYQQM  +G++ DILTYN+V+ A+ +LGKLDQFHRLLDEM R+GFS
Sbjct: 241 HALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFS 300

Query: 301 PDNHTYNILLFVLGKGDKPLAALNLLNHMREVGFDPSILHFTTLIDGLSRAGNLDACKYF 360
           PD HTYNILL VLGKGDKPLAALNLLNHM+EVGFDPS+LHFTTL+DGLSRAGNLDACKYF
Sbjct: 301 PDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYF 360

Query: 361 FDELGNKGCIPDVACYTVMITTYTVAGEHEKARELFDEMVMKGQLPNVLTYNSMIRGFCM 420
           FDE+ NKGC+PDV CYTVMIT+Y  AGE EKA++LFD M+ KGQLPNV TYNSMIRGFCM
Sbjct: 361 FDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCM 420

Query: 421 AGKFDEAYSMLAEMETRGCRPNFVVYSTLVSYLRNAGKLSEAHKVITRMVEKGQYAHLI 477
           AGKFDEA +M+ EME+RGC PNF+VY+TLVS LRNAGKL+EAH+VI  MVEKG+Y HL+
Sbjct: 421 AGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLV 478

[Close]
BLAST of CmaCh16G001270 vs. TrEMBL
Match: A0A061G067_THECC (Pentatricopeptide repeat (PPR) superfamily protein OS=Theobroma cacao GN=TCM_015166 PE=4 SV=1)

HSP 1 Score: 656.8 bits (1693), Expect = 2.1e-185
Identity = 323/486 (66.46%), Postives = 385/486 (79.22%), Query Frame = 1 

Query: 1   MNSLSLVSSRIV---CRLLPPSFIVRRAICNRSFGGD---DRFEFVVEPNKKRLEGSEFG 60
           MNS++L  +R V   C ++    IV R +C+  F  D     F +  EP K+  +GS F 
Sbjct: 1   MNSIALFGTRNVYKSCYII----IVSRKLCDGGFDRDKIDSEFYYSEEPLKRMYKGSSFD 60

Query: 61  YFTDENSDSC-EIGSRRGDDLSMRRGFPEGAKIDAEKVIEILKQDGPGFDTLLALDELQL 120
              D N D+     S     L  R GF +  + DA +++E+L+QDGPGFD   AL E+Q+
Sbjct: 61  SVFDGNHDNFGAYASGSVGRLPTRHGFFKSGRDDARRILEVLQQDGPGFDAKAALSEMQM 120

Query: 121 QVSGVLVREVLKGILRSVNVLNKTQCAKLGYKFFLWSGKVENYRHTASSYHMIMKIFAEC 180
           +VSG LVREVL GIL+++N  NKT+CAKLGYKFF+WSG+ E YRHT +SYH+IMKIFAEC
Sbjct: 121 RVSGFLVREVLVGILKNINYANKTRCAKLGYKFFVWSGQQETYRHTTNSYHLIMKIFAEC 180

Query: 181 EEFKAMWRLLDEMTEKGYPVTARTFMILICTCGDAGLARKVVERFIKSKTFNFRPFKHSY 240
           EE+KAMWRL+DEM E GYP TARTF ILICTCG+AGLARKVVERFIKSKTFN+RPFKHSY
Sbjct: 181 EEYKAMWRLVDEMIENGYPTTARTFNILICTCGEAGLARKVVERFIKSKTFNYRPFKHSY 240

Query: 241 NAILHGLLVIKQYKLIEWVYQQMLLDGHSSDILTYNVVLYARCKLGKLDQFHRLLDEMAR 300
           NAILH LLV+ QYKLIEWVYQQML +G + D LTYN+++ A  +LGKLDQFHRLLDEM R
Sbjct: 241 NAILHTLLVVNQYKLIEWVYQQMLAEGLAPDTLTYNILMCAEYRLGKLDQFHRLLDEMGR 300

Query: 301 NGFSPDNHTYNILLFVLGKGDKPLAALNLLNHMREVGFDPSILHFTTLIDGLSRAGNLDA 360
           +GFSPD HTYNILL VLGKGDKPLAA+NLLNHM+EVG +P +LHFTTLIDGLSRAGNLDA
Sbjct: 301 SGFSPDFHTYNILLHVLGKGDKPLAAVNLLNHMKEVGLNPGVLHFTTLIDGLSRAGNLDA 360

Query: 361 CKYFFDELGNKGCIPDVACYTVMITTYTVAGEHEKARELFDEMVMKGQLPNVLTYNSMIR 420
           CKYFFDE+   GC+PDV CYTV+IT + VAGE +KA+E+FDEM+  GQLPNV TYNSMIR
Sbjct: 361 CKYFFDEMIKIGCMPDVVCYTVIITGFIVAGELDKAQEMFDEMIANGQLPNVFTYNSMIR 420

Query: 421 GFCMAGKFDEAYSMLAEMETRGCRPNFVVYSTLVSYLRNAGKLSEAHKVITRMVEKGQYA 480
           G+CMAGKF+EA S+L EME RGC PNFVVYSTLVS+LRNAG+LSEA +VI  MVEKGQY 
Sbjct: 421 GYCMAGKFEEACSILKEMEARGCNPNFVVYSTLVSHLRNAGRLSEAREVIKNMVEKGQYV 480

[Close]
BLAST of CmaCh16G001270 vs. TAIR10
Match: AT1G55630.1 (AT1G55630.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 598.2 bits (1541), Expect = 4.5e-171
Identity = 294/479 (61.38%), Postives = 358/479 (74.74%), Query Frame = 1 

Query: 1   MNSLSLVSSRIVCRLLPPSFIVRRAICNRSFGGDDRFEFVVEPNKKRLEGSEFGYFTDEN 60
           MNS+   S+ +  R         R  CN S GGD       EP K   E SE     D+ 
Sbjct: 1   MNSVIHYSTSVAVRKASRFLFTSRKFCNGSIGGDVTDNGTEEPLKITWESSEMDCEFDQE 60

Query: 61  SDSCEIGSRRGDDLSMRRGFPEGAKIDAEKVIEILKQDGPGFDTLLALDELQLQVSGVLV 120
            +        G+ +S+R+ F E  K+ A +V++ L+QD PGF+T  ALDEL + +SG+LV
Sbjct: 61  EN--------GEKISVRKRFMESTKLSASRVLDTLQQDCPGFNTKSALDELNVSISGLLV 120

Query: 121 REVLKGILRSVNVLNKTQCAKLGYKFFLWSGKVENYRHTASSYHMIMKIFAECEEFKAMW 180
           REVL GILR+++  NKT+CAKL YKFF+W G  EN+RHTA+ YH++MKIFAEC E+KAM 
Sbjct: 121 REVLVGILRTLSFDNKTRCAKLAYKFFVWCGGQENFRHTANCYHLLMKIFAECGEYKAMC 180

Query: 181 RLLDEMTEKGYPVTARTFMILICTCGDAGLARKVVERFIKSKTFNFRPFKHSYNAILHGL 240
           RL+DEM + GYP TA TF +LICTCG+AGLAR VVE+FIKSKTFN+RP+KHSYNAILH L
Sbjct: 181 RLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSL 240

Query: 241 LVIKQYKLIEWVYQQMLLDGHSSDILTYNVVLYARCKLGKLDQFHRLLDEMARNGFSPDN 300
           L +KQYKLI+WVY+QML DG + D+LTYN+V++A  +LGK D+ +RLLDEM ++GFSPD 
Sbjct: 241 LGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDL 300

Query: 301 HTYNILLFVLGKGDKPLAALNLLNHMREVGFDPSILHFTTLIDGLSRAGNLDACKYFFDE 360
           +TYNILL  L  G+KPLAALNLLNHMREVG +P ++HFTTLIDGLSRAG L+ACKYF DE
Sbjct: 301 YTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDE 360

Query: 361 LGNKGCIPDVACYTVMITTYTVAGEHEKARELFDEMVMKGQLPNVLTYNSMIRGFCMAGK 420
               GC PDV CYTVMIT Y   GE EKA E+F EM  KGQLPNV TYNSMIRGFCMAGK
Sbjct: 361 TVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGK 420

Query: 421 FDEAYSMLAEMETRGCRPNFVVYSTLVSYLRNAGKLSEAHKVITRMVEKGQYAHLIPEL 480
           F EA ++L EME+RGC PNFVVYSTLV+ L+NAGK+ EAH+V+  MVEKG Y HLI +L
Sbjct: 421 FKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKGHYVHLISKL 471

[Close]
BLAST of CmaCh16G001270 vs. TAIR10
Match: AT3G60050.1 (AT3G60050.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 589.7 bits (1519), Expect = 1.6e-168
Identity = 289/477 (60.59%), Postives = 365/477 (76.52%), Query Frame = 1 

Query: 3   SLSLVSSRIVCRLLPPSFIVRRAICNRSFGGDDRFEFVVEPNKKRLEGSEFGYFTDENSD 62
           +L+LV    V R       + R  CN +FGG++                + G+  DE+S+
Sbjct: 2   NLALVLGTNVVRKAYRFLFISRKFCNGNFGGNEI--------DNGFPDLDCGF--DEDSN 61

Query: 63  SCEIGSRRGDDLSMRRGFPEGAKIDAEKVIEILKQDGPGFDTLLALDELQLQVSGVLVRE 122
             E+ S   + +S+R  F E A   A +V+  L+ D  GF++   LDEL ++VSG+LVRE
Sbjct: 62  ISELRSIDREVISVRSRFLESANHSASRVLVTLQLDESGFNSKSVLDELNVRVSGLLVRE 121

Query: 123 VLKGILRSVNVLNKTQCAKLGYKFFLWSGKVENYRHTASSYHMIMKIFAECEEFKAMWRL 182
           VL GILR+++  NK +CAKL Y+FFLWSG+ E +RHT +SYH++MKIFAEC E+KAMWRL
Sbjct: 122 VLVGILRNLSYDNKARCAKLAYRFFLWSGEQECFRHTVNSYHLLMKIFAECGEYKAMWRL 181

Query: 183 LDEMTEKGYPVTARTFMILICTCGDAGLARKVVERFIKSKTFNFRPFKHSYNAILHGLLV 242
           +DEM + G+P TARTF +LIC+CG+AGLA++ V +F+KSKTFN+RPFKHSYNAIL+ LL 
Sbjct: 182 VDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLG 241

Query: 243 IKQYKLIEWVYQQMLLDGHSSDILTYNVVLYARCKLGKLDQFHRLLDEMARNGFSPDNHT 302
           +KQYKLIEWVY+QML DG S D+LTYN++L+   +LGK+D+F RL DEMAR+GFSPD++T
Sbjct: 242 VKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYT 301

Query: 303 YNILLFVLGKGDKPLAALNLLNHMREVGFDPSILHFTTLIDGLSRAGNLDACKYFFDELG 362
           YNILL +LGKG+KPLAAL  LNHM+EVG DPS+LH+TTLIDGLSRAGNL+ACKYF DE+ 
Sbjct: 302 YNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMV 361

Query: 363 NKGCIPDVACYTVMITTYTVAGEHEKARELFDEMVMKGQLPNVLTYNSMIRGFCMAGKFD 422
             GC PDV CYTVMIT Y V+GE +KA+E+F EM +KGQLPNV TYNSMIRG CMAG+F 
Sbjct: 362 KAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFR 421

Query: 423 EAYSMLAEMETRGCRPNFVVYSTLVSYLRNAGKLSEAHKVITRMVEKGQYAHLIPEL 480
           EA  +L EME+RGC PNFVVYSTLVSYLR AGKLSEA KVI  MV+KG Y HL+P++
Sbjct: 422 EACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKGHYVHLVPKM 468

[Close]
BLAST of CmaCh16G001270 vs. TAIR10
Match: AT5G18390.1 (AT5G18390.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 160.2 bits (404), Expect = 3.2e-39
Identity = 98/365 (26.85%), Postives = 172/365 (47.12%), Query Frame = 1 

Query: 107 ALDELQLQVSGVLVREVLKGILRSVNVLNKTQCAKLGYKFFLWSGKVENYRHTASSYHMI 166
           +L+ L+L V+   V  VL+   RS N            +FF W+    +Y  T+  Y  +
Sbjct: 67  SLNSLRLPVTSEFVFRVLRATSRSSND---------SLRFFNWARSNPSYTPTSMEYEEL 126

Query: 167 MKIFAECEEFKAMWRLLDEMTEKGYPVTARTFMILICTCGDAGLARKVVERFIK-SKTFN 226
            K  A  +++++MW++L +M +    ++  T   +I   G  G   + VE F    KT  
Sbjct: 127 AKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLG 186

Query: 227 FRPFKHSYNAILHGLLVIKQYKLIEWVYQQMLLDGHSSDILTYNVVLYARCKLGKLDQFH 286
            +     YN++LH L  +K +     + ++M+  G   D  TY +++   C  GK+ +  
Sbjct: 187 CQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQ 246

Query: 287 RLLDEMARNGFSPDNHTYNILLFVLGKGDKPLAALNLLNHMREVGFDPSILHFTTLIDGL 346
             LDEM+R GF+P     ++L+  L       +A  +++ M + GF P I  F  LI+ +
Sbjct: 247 EFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAI 306

Query: 347 SRAGNLDACKYFFDELGNKGCIPDVACYTVMITTYTVAGEHEKARELFDEMVMKGQLPNV 406
           S++G ++ C   +      G   D+  Y  +I   +  G+ ++A  L +  V  G  P  
Sbjct: 307 SKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFP 366

Query: 407 LTYNSMIRGFCMAGKFDEAYSMLAEMETRGCRPNFVVYSTLVSYLRNAGKLSEAHKVITR 466
             Y  +I+G C  G FD+A+S  ++M+ +   PN  VY+ L++     GK  +A   +  
Sbjct: 367 SLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVE 422

Query: 467 MVEKG 471
           M E G
Sbjct: 427 MTEMG 422

[Close]
BLAST of CmaCh16G001270 vs. TAIR10
Match: AT5G65820.1 (AT5G65820.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 159.1 bits (401), Expect = 7.0e-39
Identity = 103/386 (26.68%), Postives = 183/386 (47.41%), Query Frame = 1 

Query: 87  DAEKVIEILKQDGPGFDTLLALDELQLQVSGVLVREVLKGILRSVNVLNKT-QCAKLGYK 146
           D EK   IL++    F + +   EL L  SGV   E+  G++    VLN+      LGY+
Sbjct: 82  DVEKSYRILRK----FHSRVPKLELALNESGV---ELRPGLIE--RVLNRCGDAGNLGYR 141

Query: 147 FFLWSGKVENYRHTASSYHMIMKIFAECEEFKAMWRLLDEM-TEKGYPVTARTFMILICT 206
           FF+W+ K   Y H+   Y  ++KI ++  +F A+W L++EM  E    +    F++L+  
Sbjct: 142 FFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQR 201

Query: 207 CGDAGLARKVVERFIKSKTFNFRPFKHSYNAILHGLLVIKQYKLIEWVYQQMLLDGHSSD 266
              A + +K +E   +   F F P ++ +  +L  L      K    +++ M +     +
Sbjct: 202 FASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRM-RFPVN 261

Query: 267 ILTYNVVLYARCKLGKLDQFHRLLDEMARNGFSPDNHTYNILLFVLGKGDKPLAALNLLN 326
           +  +  +LY  C++GK+ +   +L +M   GF PD   Y  LL       K   A +LL 
Sbjct: 262 LRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLR 321

Query: 327 HMREVGFDPSILHFTTLIDGLSRAGNLDACKYFFDELGNKGCIPDVACYTVMITTYTVAG 386
            MR  GF+P+   +T LI  L +   ++     F E+    C  DV  YT +++ +   G
Sbjct: 322 DMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWG 381

Query: 387 EHEKARELFDEMVMKGQLPNVLTYNSMIRGFCMAGKFDEAYSMLAEMETRGCRPNFVVYS 446
           + +K   + D+M+ KG +P+ LTY  ++        F+E   ++ +M      P+  +Y+
Sbjct: 382 KIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYN 441

Query: 447 TLVSYLRNAGKLSEAHKVITRMVEKG 471
            ++      G++ EA ++   M E G
Sbjct: 442 VVIRLACKLGEVKEAVRLWNEMEENG 457

[Close]
BLAST of CmaCh16G001270 vs. TAIR10
Match: AT3G16010.1 (AT3G16010.1 Pentatricopeptide repeat (PPR-like) superfamily protein)

HSP 1 Score: 158.3 bits (399), Expect = 1.2e-38
Identity = 110/385 (28.57%), Postives = 182/385 (47.27%), Query Frame = 1 

Query: 89  EKVIEILKQDGPGFDTLLALDELQLQVSGVLVREVLKGILRSVNVLNKTQCAKLGYKFFL 148
           E+ I I+K    G D   AL+ L+L+V   LVR +L+ I   +NV           +FF 
Sbjct: 65  ERFIRIVKIFKWGPDAEKALEVLKLKVDHRLVRSILE-IDVEINVK---------IQFFK 124

Query: 149 WSGKVENYRHTASSYHMIMKIFAECEEFKAMWRLLDEMTEKGY-PVTARTFMILICTCGD 208
           W+GK  N++H  S+Y  +++   E   +  M+R + E+    Y  V+      L+   G 
Sbjct: 125 WAGKRRNFQHDCSTYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELVKALGR 184

Query: 209 AGLARKVVERFIKSKTFNFRPFKHSYNAILHGLLVIKQYKLIEWVYQQMLLDGHS-SDIL 268
           A +  K +  F ++K    +P   +YN+++  L+   Q++ +  VY +M  +G    D +
Sbjct: 185 AKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTI 244

Query: 269 TYNVVLYARCKLGKLDQFHRLLDEMARNGFSPDNHTYNILLFVLGKGDKPLAALNLLNHM 328
           TY+ ++ +  KLG+ D   RL DEM  N   P    Y  LL +  K  K   AL+L   M
Sbjct: 245 TYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEM 304

Query: 329 REVGFDPSILHFTTLIDGLSRAGNLDACKYFFDELGNKGCIPDVACYTVMITTYTVAGEH 388
           +  G  P++  +T LI GL +AG +D    F+ ++   G  PDV     ++      G  
Sbjct: 305 KRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRV 364

Query: 389 EKARELFDEMVMKGQLPNVLTYNSMIRG-FCMAGKFDEAYSMLAEMETRGCRPNFVVYST 448
           E+   +F EM M    P V++YN++I+  F       E  S   +M+     P+   YS 
Sbjct: 365 EELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSI 424

Query: 449 LVSYLRNAGKLSEAHKVITRMVEKG 471
           L+       ++ +A  ++  M EKG
Sbjct: 425 LIDGYCKTNRVEKALLLLEEMDEKG 439

[Close]
BLAST of CmaCh16G001270 vs. NCBI nr
Match: gi|659077478|ref|XP_008439226.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g55630-like [Cucumis melo])

HSP 1 Score: 822.8 bits (2124), Expect = 3.2e-235
Identity = 401/481 (83.37%), Postives = 430/481 (89.40%), Query Frame = 1 

Query: 1   MNSLSLVSSRIVCRLLPPSFIVRRAICNRSFGGDDRFEFVVEPNKKRLEGSEFGYFTDEN 60
           MNSLSLVSSRIVCRL   SFIVRR I NRSF  DDRF+FVVEP         F YF D N
Sbjct: 1   MNSLSLVSSRIVCRLFSTSFIVRRTIWNRSFCSDDRFQFVVEP---------FSYFADGN 60

Query: 61  SDSCEIGSRRGDDLSMRRGFPEGAKIDAEKVIEILKQDGPGFDTLLALDELQLQVSGVLV 120
           SDS E  SRR DD S+RR F + AKIDAEKVIEILKQDGPGFDT LALDEL+LQVSGVLV
Sbjct: 61  SDSFETDSRRWDDFSLRRSFLKDAKIDAEKVIEILKQDGPGFDTFLALDELKLQVSGVLV 120

Query: 121 REVLKGILRSVNVLNKTQCAKLGYKFFLWSGKVENYRHTASSYHMIMKIFAECEEFKAMW 180
            EVLKGIL+S +VLNKTQCAKLGYKFF+WS ++ENYRHT  SYHMIMKIFAECEEFKAMW
Sbjct: 121 GEVLKGILKSTSVLNKTQCAKLGYKFFVWSSRIENYRHTVKSYHMIMKIFAECEEFKAMW 180

Query: 181 RLLDEMTEKGYPVTARTFMILICTCGDAGLARKVVERFIKSKTFNFRPFKHSYNAILHGL 240
           RLLDEMTEKGYPVTARTFMILICTCGDAGLA+KVVERFIKSKTFNFRP+KHSYNAILHGL
Sbjct: 181 RLLDEMTEKGYPVTARTFMILICTCGDAGLAKKVVERFIKSKTFNFRPYKHSYNAILHGL 240

Query: 241 LVIKQYKLIEWVYQQMLLDGHSSDILTYNVVLYARCKLGKLDQFHRLLDEMARNGFSPDN 300
           +V+KQYKLIEWVY+QMLLDGH  DILTYNV+L++RCKLGKLDQFHRLLDEMAR GFSPD 
Sbjct: 241 VVVKQYKLIEWVYEQMLLDGHGPDILTYNVLLFSRCKLGKLDQFHRLLDEMARKGFSPDF 300

Query: 301 HTYNILLFVLGKGDKPLAALNLLNHMREVGFDPSILHFTTLIDGLSRAGNLDACKYFFDE 360
           HTYNILL+VLGKGDKPLAALNLLNHMREVGF P+ILHFTTLI+GLSRAGNLDACKYFFDE
Sbjct: 301 HTYNILLYVLGKGDKPLAALNLLNHMREVGFGPNILHFTTLINGLSRAGNLDACKYFFDE 360

Query: 361 LGNKGCIPDVACYTVMITTYTVAGEHEKARELFDEMVMKGQLPNVLTYNSMIRGFCMAGK 420
           LGN  CIPDV CYTVMIT+YT AG+HEKAR  FDEM+MKGQLPNV TYNSMIRGFCM GK
Sbjct: 361 LGNHDCIPDVVCYTVMITSYTEAGQHEKARAFFDEMIMKGQLPNVFTYNSMIRGFCMVGK 420

Query: 421 FDEAYSMLAEMETRGCRPNFVVYSTLVSYLRNAGKLSEAHKVITRMVEKGQYAHLIPELA 480
           F EAYSML+EME+RGCRPNF+VYSTLVSYLRNAGKL+EAHKVITRMVE GQYAHL+ +  
Sbjct: 421 FKEAYSMLSEMESRGCRPNFLVYSTLVSYLRNAGKLAEAHKVITRMVENGQYAHLMTKFK 472

Query: 481 G 482
           G
Sbjct: 481 G 472

[Close]
BLAST of CmaCh16G001270 vs. NCBI nr
Match: gi|449446161|ref|XP_004140840.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g55630-like [Cucumis sativus])

HSP 1 Score: 803.1 bits (2073), Expect = 2.6e-229
Identity = 389/481 (80.87%), Postives = 425/481 (88.36%), Query Frame = 1 

Query: 1   MNSLSLVSSRIVCRLLPPSFIVRRAICNRSFGGDDRFEFVVEPNKKRLEGSEFGYFTDEN 60
           MNSLSLVSSRIVCRL   SFIVRR I NR+F  DDRF+F VEP         F Y  D N
Sbjct: 1   MNSLSLVSSRIVCRLFSTSFIVRRTIWNRNFCSDDRFQFFVEP---------FSYLADGN 60

Query: 61  SDSCEIGSRRGDDLSMRRGFPEGAKIDAEKVIEILKQDGPGFDTLLALDELQLQVSGVLV 120
           SDS E  SRR DD S RR F + AKIDAEKVIEILKQDGPGFDT LALDELQL+VSGVLV
Sbjct: 61  SDSFETDSRRWDDFSFRRSFLKDAKIDAEKVIEILKQDGPGFDTFLALDELQLKVSGVLV 120

Query: 121 REVLKGILRSVNVLNKTQCAKLGYKFFLWSGKVENYRHTASSYHMIMKIFAECEEFKAMW 180
            EVLKGIL+S +VLNKTQCAKLGYKFF+WSG++ENYRHT +SYH+IMKIFAECEEFKAMW
Sbjct: 121 GEVLKGILKSKSVLNKTQCAKLGYKFFIWSGRIENYRHTVNSYHIIMKIFAECEEFKAMW 180

Query: 181 RLLDEMTEKGYPVTARTFMILICTCGDAGLARKVVERFIKSKTFNFRPFKHSYNAILHGL 240
           R+LDEMTEKGYPVTARTFMILICTCG+AGLA++VVERFIKSKTFNFRP+KHSYNAILHGL
Sbjct: 181 RVLDEMTEKGYPVTARTFMILICTCGEAGLAKRVVERFIKSKTFNFRPYKHSYNAILHGL 240

Query: 241 LVIKQYKLIEWVYQQMLLDGHSSDILTYNVVLYARCKLGKLDQFHRLLDEMARNGFSPDN 300
           +++KQYKLI WVY QMLLD HS DILTYNV+L++ CKLGKLDQFHRLLDEMAR GFSPD 
Sbjct: 241 VIVKQYKLIGWVYDQMLLDDHSPDILTYNVLLFSSCKLGKLDQFHRLLDEMARKGFSPDF 300

Query: 301 HTYNILLFVLGKGDKPLAALNLLNHMREVGFDPSILHFTTLIDGLSRAGNLDACKYFFDE 360
           HTYNILL+VLGKGDKPLAALNLLNHMREVGF P++LHFTTLI+GLSRAGNLDACKYFFDE
Sbjct: 301 HTYNILLYVLGKGDKPLAALNLLNHMREVGFGPNVLHFTTLINGLSRAGNLDACKYFFDE 360

Query: 361 LGNKGCIPDVACYTVMITTYTVAGEHEKARELFDEMVMKGQLPNVLTYNSMIRGFCMAGK 420
           LGN GCIPDV CYTVMIT++T AG+HEKAR  FDEM+MKGQLPNV TYNSMIRGFCM GK
Sbjct: 361 LGNNGCIPDVVCYTVMITSFTEAGQHEKARAFFDEMIMKGQLPNVFTYNSMIRGFCMVGK 420

Query: 421 FDEAYSMLAEMETRGCRPNFVVYSTLVSYLRNAGKLSEAHKVITRMVEKGQYAHLIPELA 480
           F EAYSML+EME+RGCRPNF+VYSTLVSYLRNAGKL EAHKVI +MVE GQYAHL+ +  
Sbjct: 421 FKEAYSMLSEMESRGCRPNFLVYSTLVSYLRNAGKLGEAHKVIKQMVENGQYAHLMTKFK 472

Query: 481 G 482
           G
Sbjct: 481 G 472

[Close]
BLAST of CmaCh16G001270 vs. NCBI nr
Match: gi|645257085|ref|XP_008234250.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g60050-like [Prunus mume])

HSP 1 Score: 682.9 bits (1761), Expect = 4.0e-193
Identity = 330/484 (68.18%), Postives = 395/484 (81.61%), Query Frame = 1 

Query: 1   MNSLSLVSSRIVCRLLPPSFIVRRAICNRSFGG---DDRFEFVVEPNKKRLEGSEFGYFT 60
           MN +SL   R++ ++    F+V R + +  FGG   D+  EF+ EP K+    S+F    
Sbjct: 1   MNCISLFGPRVIQKI-SCYFVVARKLSDGCFGGNKGDNGHEFIEEPLKRIWRSSDFDSVL 60

Query: 61  DENSDSCEIGSRRGDDLSMRRGFPEGAKIDAEKVIEILKQDGPGFDTLLALDELQLQVSG 120
           DE  +  E  +R  +  S+RR F E AKI   +V+E+L+QDGPGFDT  ALDEL ++VSG
Sbjct: 61  DEKQNVHEYENRPREYFSLRRSFFENAKIHTRRVLEVLQQDGPGFDTKAALDELHIEVSG 120

Query: 121 VLVREVLKGILRSVNVLNKTQCAKLGYKFFLWSGKVENYRHTASSYHMIMKIFAECEEFK 180
           +LVREVL  IL+ VN  +K +CAKLGYKFF+WSG++ENYRHTA++YH++MKIFA+CEEFK
Sbjct: 121 LLVREVLFNILKQVNYASKMRCAKLGYKFFVWSGQLENYRHTANTYHLMMKIFADCEEFK 180

Query: 181 AMWRLLDEMTEKGYPVTARTFMILICTCGDAGLARKVVERFIKSKTFNFRPFKHSYNAIL 240
           AMWRL+DEM EKGYP TA+TF ILI TCG+AGLA+KVVERFIKSKTFN+RPFKHSYNAIL
Sbjct: 181 AMWRLVDEMIEKGYPTTAQTFSILIRTCGEAGLAKKVVERFIKSKTFNYRPFKHSYNAIL 240

Query: 241 HGLLVIKQYKLIEWVYQQMLLDGHSSDILTYNVVLYARCKLGKLDQFHRLLDEMARNGFS 300
           H L+V+KQYKLIEWVYQQML DGH +DILTYNV++YA+ +LGKLDQFHRLL+EM R+GF+
Sbjct: 241 HSLVVVKQYKLIEWVYQQMLADGHCTDILTYNVMMYAKYRLGKLDQFHRLLEEMGRSGFA 300

Query: 301 PDNHTYNILLFVLGKGDKPLAALNLLNHMREVGFDPSILHFTTLIDGLSRAGNLDACKYF 360
           PD HTYNILL VLGKGDKPLAALNLLNHM+EVGFDPS+LHFTTLIDGLSRAGNLDACKYF
Sbjct: 301 PDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLIDGLSRAGNLDACKYF 360

Query: 361 FDELGNKGCIPDVACYTVMITTYTVAGEHEKARELFDEMVMKGQLPNVLTYNSMIRGFCM 420
           FDE+    C PDV CYTVMI+ Y VAGE EKA+ +FDEM+  GQLPNV TYN+MIRG CM
Sbjct: 361 FDEMIKHECFPDVVCYTVMISGYIVAGELEKAQGVFDEMIPNGQLPNVFTYNAMIRGLCM 420

Query: 421 AGKFDEAYSMLAEMETRGCRPNFVVYSTLVSYLRNAGKLSEAHKVITRMVEKGQYAHLIP 480
           AGKF+EA SML +ME+RGC PNF VYSTLVSYLRNAGK ++AH+VIT MVEKGQY HL+ 
Sbjct: 421 AGKFEEACSMLKDMESRGCNPNFTVYSTLVSYLRNAGKRAKAHEVITHMVEKGQYTHLLS 480

Query: 481 ELAG 482
           +  G
Sbjct: 481 KFKG 483

[Close]
BLAST of CmaCh16G001270 vs. NCBI nr
Match: gi|658037312|ref|XP_008354224.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g55630-like [Malus domestica])

HSP 1 Score: 667.9 bits (1722), Expect = 1.3e-188
Identity = 323/483 (66.87%), Postives = 390/483 (80.75%), Query Frame = 1 

Query: 1   MNSLSLVSSRIVCRLLPPSFIVRRAI--CNRSFGGDDRFEFVVEPNKKRLEGSEFGYFTD 60
           MN + L   R++ ++     +VR+    C R   GD+ +EFV E  K   + SEF    D
Sbjct: 1   MNCIYLFGPRVIRKISCYVVVVRKLSDGCFRGDKGDNGYEFVEETLKTMWKSSEFDSVLD 60

Query: 61  ENSDSCEIGSRRGDDLSMRRGFPEGAKIDAEKVIEILKQDGPGFDTLLALDELQLQVSGV 120
           E    CE  +R  +  S+RR F + AKID  +V+++L++DGPGFDT  AL EL+++VSG+
Sbjct: 61  EKHGVCESENRPREHFSLRRSFFKNAKIDTARVLKVLREDGPGFDTKAALGELRIEVSGL 120

Query: 121 LVREVLKGILRSVNVLNKTQCAKLGYKFFLWSGKVENYRHTASSYHMIMKIFAECEEFKA 180
           LVREVL  IL+ ++  +K +CAKLGYKFF+WSG++ENY+HTA++YH++MKIFA+CEEFKA
Sbjct: 121 LVREVLFEILKQIDYGSKMRCAKLGYKFFVWSGQLENYKHTANTYHLMMKIFADCEEFKA 180

Query: 181 MWRLLDEMTEKGYPVTARTFMILICTCGDAGLARKVVERFIKSKTFNFRPFKHSYNAILH 240
           MWRL+DEM EKGYP TA+TF ILI TCG+AGLARKVVERFIKSKTFN+RPFKHSYNAILH
Sbjct: 181 MWRLVDEMIEKGYPTTAQTFNILIRTCGEAGLARKVVERFIKSKTFNYRPFKHSYNAILH 240

Query: 241 GLLVIKQYKLIEWVYQQMLLDGHSSDILTYNVVLYARCKLGKLDQFHRLLDEMARNGFSP 300
            LLV+KQYKLIEW YQQML +GHS+DILTYNV++ A+ +LGKLDQFHRLLDEM R+GF+P
Sbjct: 241 SLLVVKQYKLIEWAYQQMLAEGHSADILTYNVMMCAKYRLGKLDQFHRLLDEMGRSGFTP 300

Query: 301 DNHTYNILLFVLGKGDKPLAALNLLNHMREVGFDPSILHFTTLIDGLSRAGNLDACKYFF 360
           D HTYNILL VLGKGDKPLAALNLLNHM+E GF PS+LHFTTLIDGLSRAGN+DACKYFF
Sbjct: 301 DFHTYNILLHVLGKGDKPLAALNLLNHMKEEGFKPSVLHFTTLIDGLSRAGNMDACKYFF 360

Query: 361 DELGNKGCIPDVACYTVMITTYTVAGEHEKARELFDEMVMKGQLPNVLTYNSMIRGFCMA 420
           DE+    C PDV CYTVMIT Y VAGE EKA+ +FDEM+  GQLPNV TYN+MIRG CMA
Sbjct: 361 DEMTKHECTPDVVCYTVMITGYIVAGELEKAQVVFDEMIPNGQLPNVFTYNAMIRGLCMA 420

Query: 421 GKFDEAYSMLAEMETRGCRPNFVVYSTLVSYLRNAGKLSEAHKVITRMVEKGQYAHLIPE 480
            KF+EA S+L  ME+RGC PNF VYSTLVSYLRNAGKL+EAH+VITRM+EKGQY HL+ +
Sbjct: 421 RKFEEACSVLKVMESRGCNPNFTVYSTLVSYLRNAGKLAEAHEVITRMMEKGQYTHLLSK 480

Query: 481 LAG 482
             G
Sbjct: 481 FKG 483

[Close]
BLAST of CmaCh16G001270 vs. NCBI nr
Match: gi|596041207|ref|XP_007220061.1| (hypothetical protein PRUPE_ppa025794mg [Prunus persica])

HSP 1 Score: 666.8 bits (1719), Expect = 2.9e-188
Identity = 316/440 (71.82%), Postives = 372/440 (84.55%), Query Frame = 1 

Query: 42  EPNKKRLEGSEFGYFTDENSDSCEIGSRRGDDLSMRRGFPEGAKIDAEKVIEILKQDGPG 101
           EP K+    S+F    DE  +  E  +R  +  S+RR F E AKI   +V+E+L+QDGPG
Sbjct: 3   EPLKRIWRSSDFDSVLDEKQNVPEYENRPREYFSLRRSFFENAKIHTRRVLEVLQQDGPG 62

Query: 102 FDTLLALDELQLQVSGVLVREVLKGILRSVNVLNKTQCAKLGYKFFLWSGKVENYRHTAS 161
           FDT  ALDEL ++VSG+LVREVL  IL+ VN  +K +CAKLGYKFF+WSG++ENYRHTA+
Sbjct: 63  FDTKAALDELHIEVSGLLVREVLFKILKQVNYASKMRCAKLGYKFFVWSGQLENYRHTAN 122

Query: 162 SYHMIMKIFAECEEFKAMWRLLDEMTEKGYPVTARTFMILICTCGDAGLARKVVERFIKS 221
           +YH++MKIFA+CEEFKAMWRL+DEM EKGYP TA+TF ILICTCG+AGLA+KVVERFIKS
Sbjct: 123 TYHLMMKIFADCEEFKAMWRLVDEMIEKGYPTTAQTFNILICTCGEAGLAKKVVERFIKS 182

Query: 222 KTFNFRPFKHSYNAILHGLLVIKQYKLIEWVYQQMLLDGHSSDILTYNVVLYARCKLGKL 281
           KTFN+RPFKHSYNAILH L+V+KQYKLIEWVYQQML DGH +DILTYNV++YA+ +LGKL
Sbjct: 183 KTFNYRPFKHSYNAILHSLVVVKQYKLIEWVYQQMLADGHCTDILTYNVMMYAKYRLGKL 242

Query: 282 DQFHRLLDEMARNGFSPDNHTYNILLFVLGKGDKPLAALNLLNHMREVGFDPSILHFTTL 341
           DQFHRLL+EM R+GF+PD HTYNILL VLGKGDKPLAALNLLNHM+EVG DPS+LHFTTL
Sbjct: 243 DQFHRLLEEMGRSGFAPDLHTYNILLHVLGKGDKPLAALNLLNHMKEVGLDPSVLHFTTL 302

Query: 342 IDGLSRAGNLDACKYFFDELGNKGCIPDVACYTVMITTYTVAGEHEKARELFDEMVMKGQ 401
           IDGLSR+GNLDACKYFFDE+    C PDV CYTVMI+ Y VAGE EKA+ +FDEM+  GQ
Sbjct: 303 IDGLSRSGNLDACKYFFDEMIKHECFPDVVCYTVMISGYIVAGELEKAQGVFDEMIPNGQ 362

Query: 402 LPNVLTYNSMIRGFCMAGKFDEAYSMLAEMETRGCRPNFVVYSTLVSYLRNAGKLSEAHK 461
           LPNV TYN+MIRG CMAGKF+EA SML +ME+RGC PNF VYSTLVSYLRNAGKL++AH+
Sbjct: 363 LPNVFTYNAMIRGLCMAGKFEEACSMLKDMESRGCNPNFTVYSTLVSYLRNAGKLAKAHE 422

Query: 462 VITRMVEKGQYAHLIPELAG 482
           VIT MVEKGQY HL+ +  G
Sbjct: 423 VITHMVEKGQYTHLLSKFKG 442

The following BLAST results are available for this feature:
BLAST of CmaCh16G001270 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PPR81_ARATH8.1e-17061.38Pentatricopeptide repeat-containing protein At1g55630 OS=Arabidopsis thaliana GN... [more]
PP288_ARATH2.9e-16760.59Pentatricopeptide repeat-containing protein At3g60050 OS=Arabidopsis thaliana GN... [more]
PP391_ARATH5.6e-3826.85Pentatricopeptide repeat-containing protein At5g18390, mitochondrial OS=Arabidop... [more]
PP447_ARATH1.2e-3726.68Putative pentatricopeptide repeat-containing protein At5g65820 OS=Arabidopsis th... [more]
PP236_ARATH2.1e-3728.57Pentatricopeptide repeat-containing protein At3g16010 OS=Arabidopsis thaliana GN... [more]
BLAST of CmaCh16G001270 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L8P4_CUCSA1.8e-22980.87Uncharacterized protein OS=Cucumis sativus GN=Csa_3G182100 PE=4 SV=1[more]
M5XQE6_PRUPE2.1e-18871.82Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025794mg PE=4 SV=1[more]
W9S7I4_9ROSA1.0e-18767.93Uncharacterized protein OS=Morus notabilis GN=L484_015785 PE=4 SV=1[more]
V4S4A4_9ROSI5.1e-18768.06Uncharacterized protein OS=Citrus clementina GN=CICLE_v10004849mg PE=4 SV=1[more]
A0A061G067_THECC2.1e-18566.46Pentatricopeptide repeat (PPR) superfamily protein OS=Theobroma cacao GN=TCM_015... [more]
BLAST of CmaCh16G001270 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G55630.14.5e-17161.38 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT3G60050.11.6e-16860.59 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT5G18390.13.2e-3926.85 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT5G65820.17.0e-3926.68 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT3G16010.11.2e-3828.57 Pentatricopeptide repeat (PPR-like) superfamily protein[more]
BLAST of CmaCh16G001270 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659077478|ref|XP_008439226.1|3.2e-23583.37PREDICTED: pentatricopeptide repeat-containing protein At1g55630-like [Cucumis m... [more]
gi|449446161|ref|XP_004140840.1|2.6e-22980.87PREDICTED: pentatricopeptide repeat-containing protein At1g55630-like [Cucumis s... [more]
gi|645257085|ref|XP_008234250.1|4.0e-19368.18PREDICTED: pentatricopeptide repeat-containing protein At3g60050-like [Prunus mu... [more]
gi|658037312|ref|XP_008354224.1|1.3e-18866.87PREDICTED: pentatricopeptide repeat-containing protein At1g55630-like [Malus dom... [more]
gi|596041207|ref|XP_007220061.1|2.9e-18871.82hypothetical protein PRUPE_ppa025794mg [Prunus persica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh16G001270.1CmaCh16G001270.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 338..366
score: 4.
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 264..307
score: 2.1E-11coord: 368..416
score: 1.2
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 427..470
score: 2.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 407..439
score: 7.4E-12coord: 372..405
score: 1.3E-6coord: 162..194
score: 0.0015coord: 441..470
score: 0.0013coord: 267..299
score: 1.5E-6coord: 301..334
score: 4.3E-4coord: 338..370
score: 9.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 229..263
score: 6.686coord: 299..333
score: 9.898coord: 159..193
score: 9.01coord: 369..403
score: 11.224coord: 439..473
score: 9.208coord: 404..438
score: 14.513coord: 334..368
score: 10.019coord: 264..298
score: 11.772coord: 194..228
score: 6
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 372..468
score: 8.9E-4coord: 261..304
score: 8.
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 134..476
score: 1.7E-211coord: 88..110
score: 1.7E
NoneNo IPR availablePANTHERPTHR24015:SF361SUBFAMILY NOT NAMEDcoord: 88..110
score: 1.7E-211coord: 134..476
score: 1.7E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh16G001270Cla006179Watermelon (97103) v1cmawmB316
CmaCh16G001270Csa3G182100Cucumber (Chinese Long) v2cmacuB329
CmaCh16G001270CSPI03G16930Wild cucumber (PI 183967)cmacpiB335
CmaCh16G001270CmoCh16G001340Cucurbita moschata (Rifu)cmacmoB322
CmaCh16G001270CmoCh18G012690Cucurbita moschata (Rifu)cmacmoB327
CmaCh16G001270Lsi05G012270Bottle gourd (USVL1VR-Ls)cmalsiB312
CmaCh16G001270Cp4.1LG09g00920Cucurbita pepo (Zucchini)cmacpeB339
CmaCh16G001270Cp4.1LG14g06120Cucurbita pepo (Zucchini)cmacpeB344
CmaCh16G001270CsaV3_3G017100Cucumber (Chinese Long) v3cmacucB0383
CmaCh16G001270Cla97C05G090090Watermelon (97103) v2cmawmbB346
CmaCh16G001270Bhi01G000962Wax gourdcmawgoB0433
CmaCh16G001270CsGy3G017010Cucumber (Gy14) v2cgybcmaB342
CmaCh16G001270Carg22100Silver-seed gourdcarcmaB1031
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh16G001270CmaCh18G012460Cucurbita maxima (Rimu)cmacmaB338
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh16G001270Cucurbita maxima (Rimu)cmacmaB346
CmaCh16G001270Cucurbita maxima (Rimu)cmacmaB359
CmaCh16G001270Cucumber (Gy14) v1cgycmaB0248
CmaCh16G001270Cucumber (Gy14) v1cgycmaB0832
CmaCh16G001270Cucurbita moschata (Rifu)cmacmoB333
CmaCh16G001270Wild cucumber (PI 183967)cmacpiB348
CmaCh16G001270Cucumber (Chinese Long) v2cmacuB344
CmaCh16G001270Melon (DHL92) v3.5.1cmameB285
CmaCh16G001270Melon (DHL92) v3.5.1cmameB296
CmaCh16G001270Watermelon (Charleston Gray)cmawcgB292
CmaCh16G001270Watermelon (Charleston Gray)cmawcgB296
CmaCh16G001270Watermelon (97103) v1cmawmB320
CmaCh16G001270Cucurbita pepo (Zucchini)cmacpeB358
CmaCh16G001270Bottle gourd (USVL1VR-Ls)cmalsiB320
CmaCh16G001270Cucumber (Gy14) v2cgybcmaB621
CmaCh16G001270Melon (DHL92) v3.6.1cmamedB338
CmaCh16G001270Melon (DHL92) v3.6.1cmamedB344
CmaCh16G001270Silver-seed gourdcarcmaB0994
CmaCh16G001270Silver-seed gourdcarcmaB1366
CmaCh16G001270Cucumber (Chinese Long) v3cmacucB0376
CmaCh16G001270Cucumber (Chinese Long) v3cmacucB0406
CmaCh16G001270Watermelon (97103) v2cmawmbB330
CmaCh16G001270Watermelon (97103) v2cmawmbB344
CmaCh16G001270Wax gourdcmawgoB0429