Cp4.1LG14g06120 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG14g06120
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionPentatricopeptide repeat-containing protein, putative
LocationCp4.1LG14 : 598176 .. 600494 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTATCAATCATGAACTCCTTATCGCTTGTGAGTTCGCGGATAGTCTGCAGATTGTTTTCGACTTCTTTTATTGTGCGTCGAACAATCTGTAATCGGAGCTTTGGTGGTGATGATCGATTTGAGTTTGTTGTGGAACCCAATAAGAAGAGGTTGGAGGGATCGGAGTTTGGTTACTTTACTGATGAAAATTCGGATTCCTGTGAGATTGGGAGTCGTAGAGGGGATGATCTGTCAATGAGAAGGGGTTTTCTAGAGGGTGCGAAAATTGGTGCTGAAAAAGTTATTGAGATTCTCAAACAGGACGGTCCTGGATTTGACACATTATTGGCTTTGGATGAACTGCAACTACAGGTCTCAGGGGTTCTTGTTAGGGAAGTTCTGAAGGGGATTTTGAGAAGTATAAATGTTCTAAACAAAACTCAATGTGCAAAATTGGGGTACAAGTTCTTCGTGTGGTCCAGTAAGGTCGAGAATTATCGACACACTGCGAGCTCGTATCATATGGTCATGAAAATATTTGCTGAATGTGAGGAGTTCAAGGCTATGTGGAGGTTACTTGATGAGATGACTGAGAAAGGGTACCCTGTGACTGCAAGGACTTTTATGATATTGATATGTACCTGTGGTGATGCAGGCTTGGCTAGGAAAGTTGTCGAGAGGTTTATCAAATCAAAAACATTCAATTTTAGGCCGTTTAAACACTCTTATAATGCGATTCTTCATGGACTACTTGTGATAAAACAGTACAAGTTGATTGAGTGGGTGTATCAGCAAATGCTGCTTGATGGTCACAGCTCAGACATTCTTACATATAATGTGGTGTTGTATGCAAGGTGCAAATTGGGGAAATTGGATCAGTTTCACAGATTGCTTGATGAAATGGCTAGAAATGGGTTTTCTCCTGATTATCATACTTATAACATTCTTCTTTTTGTTCTTGGCAAGGGAGACAAACCTCTTGCAGCTCTAAATCTTTTGAACCACATGAGGGAAGTGGGTTTTGATCCGAGCATTCTTCATTTCACGACGCTTATCGATGGACTTAGTCGGGCTGGAAATTTGGNGTAAATGTTCTAAACAAAACTCAATGTGCAAAATCGGGGTACAAGTTCTTCGTGTGGTCCGGTAAGGTCGAGAATTATCGACACACTGCGAGCTCGTATCATATNATAAATGTTCTAAACAAAACTCAATGTGCAAAATTGGGGTACAAGTTCTTCGTGTGGTCCAGTAAGGTCGAGAATTATCGACACACTGCGAGCTCGTATCATATGGTCATGAAAATATTTGCTGAATGTGAGGAGTTCAAGGCTATGTGGAGGTTACTTGATGAGATGACTGAGAAAGGGTACCCTGTGACTGCAAGGACTTTTATGATATTGATATGTACCTGTGGTGATGCAGGCTTGGCTAGGAAAGTTGTCGAGAGGTTTATCAAATCAAAAACATTCAATTTTAGGCCGTTTANTTGTGGTGATGCAGGCTTGGCTAGGAAAGTTGTTGAGAGGTTTATCAAATCAAAAACATTCAATTTTAGGCCGTTTAAACACTCTTATAATGCGATTCTTCATGGACTACTTGTGATAAAACAGTACAAGTTGATTGAGTGGGTGTATCAGCAAATGCTGCTTGATGGTCACAGCTCAGACATTCTTACATATAATGTGGTGTTGTATGCAAGGTGCAAATTGGGGAAATTGGATCAGTTTCACAGATTGCTTGATGAAATGGCTAGAAATGGGTTTTCTCCTGATTATCATACTTATAACATTCTTCTTTTTGTTCTTGGCAAGGGAGACAAACCTCTTGCAGCTCTAAATCTTTTGAACCACATGAGGGAAGTGGGTTTTGATCCGAGCATTCTTCATTTCACGACGCTTATCGATGGACTTAGTCGGGCTGGAAATTTGGATGCTTGCAAATATTTCTTTGATGAACTGGGAAACAAGGGGTGCATTCCTGATGTTGCTTGCTACACTGTGATGATCACAACCTACACAGTGGCTGGGGAGCATGAGAAAGCTAAGGAGCTTTTTGATGAGATGGTCATGAAGGGTCAGCTCCCTAATGTATTGACGTACAACTCCATGATTCGGGGTTTTTGTATGGCGGGTAAGTTCGATGAGGCTTACTCGATGCTGGCTGAAATGGAAACCCGTGGTTGCAGACCAAATTTTGTTGTATATAGTACCCTTGTAAGCTATTTGCGAAATGCTGGAAAGCTTTCTGAGGCTCATAAAGTTATAACGCGCATGGTGGAGAAGGGGCAATACGCCCATTTAGTGACGAAATTCAGGGGATATAGGAGATGCTAG

mRNA sequence

ATGGTCTGCAGATTGTTTTCGACTTCTTTTATTGTGCGTCGAACAATCTGTAATCGGAGCTTTGGTGGTGATGATCGATTTGAGTTTGTTGTGGAACCCAATAAGAAGAGGTTGGAGGGATCGGAGTTTGGTTACTTTACTGATGAAAATTCGGATTCCTGTGAGATTGGGAGTCGTAGAGGGGATGATCTGTCAATGAGAAGGGGTTTTCTAGAGGGTGCGAAAATTGGTGCTGAAAAAGTTATTGAGATTCTCAAACAGGACGGTCCTGGATTTGACACATTATTGGCTTTGGATGAACTGCAACTACAGGTCTCAGGGGTTCTTGTTAGGGAAGTTCTGAAGGGGATTTTGAGAAGTATAAATGTTCTAAACAAAACTCAATGTGCAAAATTGGGGTACAAGTTCTTCGTGTGGTCCAGTAAGGTCGAGAATTATCGACACACTGCGAGCTCGTATCATATGGTCATGAAAATATTTGCTGAATGTGAGGAGTTCAAGGCTATGTGGAGGTTACTTGATGAGATGACTGAGAAAGGGTACCCTGTGACTGCAAGGACTTTTATGATATTGATATGTACCTGTGGTGATGCAGGCTTGGCTAGGAAAGTTGTCGAGAGGTTTATCAAATCAAAAACATTCAATTTTAGGCCGTTTAAACACTCTTATAATGCGATTCTTCATGGACTACTTGTGATAAAACAGTACAAGTTGATTGAGTGGGTGTATCAGCAAATGCTGCTTGATGGTCACAGCTCAGACATTCTTACATATAATGTGGTGTTGTATGCAAGGTGCAAATTGGGGAAATTGGATCAGTTTCACAGATTGCTTGATGAAATGGCTAGAAATGGGTTTTCTCCTGATTATCATACTTATAACATTCTTCTTTTTGTTCTTGGCAAGGGAGACAAACCTCTTGCAGCTCTAAATCTTTTGAACCACATGAGGGAAGTGGGTTTTGATCCGAGCATTCTTCATTTCACGACGCTTATCGATGGACTTAGTCGGGCTGGAAATTTGGNTAAGGTCGAGAATTATCGACACACTGCGAGCTCGTATCATATGGTCATGAAAATATTTGCTGAATGTGAGGAGTTCAAGGCTATGTGGAGGTTACTTGATGAGATGACTGAGAAAGGGTACCCTGTGACTGCAAGGACTTTTATGATATTGATATGTACCTGTGGTGATGCAGGCTTGGCTAGGAAAGTTGTCGAGAGGTTTATCAAATCAAAAACATTCAATTTTAGGCCGTTTANTTGTGGTGATGCAGGCTTGGCTAGGAAAGTTGTTGAGAGGTTTATCAAATCAAAAACATTCAATTTTAGGCCGTTTAAACACTCTTATAATGCGATTCTTCATGGACTACTTGTGATAAAACAGTACAAGTTGATTGAGTGGGTGTATCAGCAAATGCTGCTTGATGGTCACAGCTCAGACATTCTTACATATAATGTGGTGTTGTATGCAAGGTGCAAATTGGGGAAATTGGATCAGTTTCACAGATTGCTTGATGAAATGGCTAGAAATGGGTTTTCTCCTGATTATCATACTTATAACATTCTTCTTTTTGTTCTTGGCAAGGGAGACAAACCTCTTGCAGCTCTAAATCTTTTGAACCACATGAGGGAAGTGGGTTTTGATCCGAGCATTCTTCATTTCACGACGCTTATCGATGGACTTAGTCGGGCTGGAAATTTGGATGCTTGCAAATATTTCTTTGATGAACTGGGAAACAAGGGGTGCATTCCTGATGTTGCTTGCTACACTGTGATGATCACAACCTACACAGTGGCTGGGGAGCATGAGAAAGCTAAGGAGCTTTTTGATGAGATGGTCATGAAGGGTCAGCTCCCTAATGTATTGACGTACAACTCCATGATTCGGGGTTTTTGTATGGCGGGTAAGTTCGATGAGGCTTACTCGATGCTGGCTGAAATGGAAACCCGTGGTTGCAGACCAAATTTTGTTGTATATAGTACCCTTGTAAGCTATTTGCGAAATGCTGGAAAGCTTTCTGAGGCTCATAAAGTTATAACGCGCATGGTGGAGAAGGGGCAATACGCCCATTTAGTGACGAAATTCAGGGGATATAGGAGATGCTAG

Coding sequence (CDS)

ATGGTCTGCAGATTGTTTTCGACTTCTTTTATTGTGCGTCGAACAATCTGTAATCGGAGCTTTGGTGGTGATGATCGATTTGAGTTTGTTGTGGAACCCAATAAGAAGAGGTTGGAGGGATCGGAGTTTGGTTACTTTACTGATGAAAATTCGGATTCCTGTGAGATTGGGAGTCGTAGAGGGGATGATCTGTCAATGAGAAGGGGTTTTCTAGAGGGTGCGAAAATTGGTGCTGAAAAAGTTATTGAGATTCTCAAACAGGACGGTCCTGGATTTGACACATTATTGGCTTTGGATGAACTGCAACTACAGGTCTCAGGGGTTCTTGTTAGGGAAGTTCTGAAGGGGATTTTGAGAAGTATAAATGTTCTAAACAAAACTCAATGTGCAAAATTGGGGTACAAGTTCTTCGTGTGGTCCAGTAAGGTCGAGAATTATCGACACACTGCGAGCTCGTATCATATGGTCATGAAAATATTTGCTGAATGTGAGGAGTTCAAGGCTATGTGGAGGTTACTTGATGAGATGACTGAGAAAGGGTACCCTGTGACTGCAAGGACTTTTATGATATTGATATGTACCTGTGGTGATGCAGGCTTGGCTAGGAAAGTTGTCGAGAGGTTTATCAAATCAAAAACATTCAATTTTAGGCCGTTTAAACACTCTTATAATGCGATTCTTCATGGACTACTTGTGATAAAACAGTACAAGTTGATTGAGTGGGTGTATCAGCAAATGCTGCTTGATGGTCACAGCTCAGACATTCTTACATATAATGTGGTGTTGTATGCAAGGTGCAAATTGGGGAAATTGGATCAGTTTCACAGATTGCTTGATGAAATGGCTAGAAATGGGTTTTCTCCTGATTATCATACTTATAACATTCTTCTTTTTGTTCTTGGCAAGGGAGACAAACCTCTTGCAGCTCTAAATCTTTTGAACCACATGAGGGAAGTGGGTTTTGATCCGAGCATTCTTCATTTCACGACGCTTATCGATGGACTTAGTCGGGCTGGAAATTTGGNTAAGGTCGAGAATTATCGACACACTGCGAGCTCGTATCATATGGTCATGAAAATATTTGCTGAATGTGAGGAGTTCAAGGCTATGTGGAGGTTACTTGATGAGATGACTGAGAAAGGGTACCCTGTGACTGCAAGGACTTTTATGATATTGATATGTACCTGTGGTGATGCAGGCTTGGCTAGGAAAGTTGTCGAGAGGTTTATCAAATCAAAAACATTCAATTTTAGGCCGTTTANTTGTGGTGATGCAGGCTTGGCTAGGAAAGTTGTTGAGAGGTTTATCAAATCAAAAACATTCAATTTTAGGCCGTTTAAACACTCTTATAATGCGATTCTTCATGGACTACTTGTGATAAAACAGTACAAGTTGATTGAGTGGGTGTATCAGCAAATGCTGCTTGATGGTCACAGCTCAGACATTCTTACATATAATGTGGTGTTGTATGCAAGGTGCAAATTGGGGAAATTGGATCAGTTTCACAGATTGCTTGATGAAATGGCTAGAAATGGGTTTTCTCCTGATTATCATACTTATAACATTCTTCTTTTTGTTCTTGGCAAGGGAGACAAACCTCTTGCAGCTCTAAATCTTTTGAACCACATGAGGGAAGTGGGTTTTGATCCGAGCATTCTTCATTTCACGACGCTTATCGATGGACTTAGTCGGGCTGGAAATTTGGATGCTTGCAAATATTTCTTTGATGAACTGGGAAACAAGGGGTGCATTCCTGATGTTGCTTGCTACACTGTGATGATCACAACCTACACAGTGGCTGGGGAGCATGAGAAAGCTAAGGAGCTTTTTGATGAGATGGTCATGAAGGGTCAGCTCCCTAATGTATTGACGTACAACTCCATGATTCGGGGTTTTTGTATGGCGGGTAAGTTCGATGAGGCTTACTCGATGCTGGCTGAAATGGAAACCCGTGGTTGCAGACCAAATTTTGTTGTATATAGTACCCTTGTAAGCTATTTGCGAAATGCTGGAAAGCTTTCTGAGGCTCATAAAGTTATAACGCGCATGGTGGAGAAGGGGCAATACGCCCATTTAGTGACGAAATTCAGGGGATATAGGAGATGCTAG

Protein sequence

MVCRLFSTSFIVRRTICNRSFGGDDRFEFVVEPNKKRLEGSEFGYFTDENSDSCEIGSRRGDDLSMRRGFLEGAKIGAEKVIEILKQDGPGFDTLLALDELQLQVSGVLVREVLKGILRSINVLNKTQCAKLGYKFFVWSSKVENYRHTASSYHMVMKIFAECEEFKAMWRLLDEMTEKGYPVTARTFMILICTCGDAGLARKVVERFIKSKTFNFRPFKHSYNAILHGLLVIKQYKLIEWVYQQMLLDGHSSDILTYNVVLYARCKLGKLDQFHRLLDEMARNGFSPDYHTYNILLFVLGKGDKPLAALNLLNHMREVGFDPSILHFTTLIDGLSRAGNLXKVENYRHTASSYHMVMKIFAECEEFKAMWRLLDEMTEKGYPVTARTFMILICTCGDAGLARKVVERFIKSKTFNFRPFXCGDAGLARKVVERFIKSKTFNFRPFKHSYNAILHGLLVIKQYKLIEWVYQQMLLDGHSSDILTYNVVLYARCKLGKLDQFHRLLDEMARNGFSPDYHTYNILLFVLGKGDKPLAALNLLNHMREVGFDPSILHFTTLIDGLSRAGNLDACKYFFDELGNKGCIPDVACYTVMITTYTVAGEHEKAKELFDEMVMKGQLPNVLTYNSMIRGFCMAGKFDEAYSMLAEMETRGCRPNFVVYSTLVSYLRNAGKLSEAHKVITRMVEKGQYAHLVTKFRGYRRC
Homology
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BLAST of Cp4.1LG14g06120 vs. Swiss-Prot
Match: PP288_ARATH (Pentatricopeptide repeat-containing protein At3g60050 OS=Arabidopsis thaliana GN=At3g60050 PE=2 SV=1)

HSP 1 Score: 491.9 bits (1265), Expect = 1.2e-137
Identity = 236/357 (66.11%), Postives = 279/357 (78.15%), Query Frame = 1 

Query: 345 ENYRHTASSYHMVMKIFAECEEFKAMWRLLDEMTEKGYPVTARTFMILICTCGDAGLARK 404
           E +RHT +SYH++MKIFAEC E+KAMWRL+DEM + G+P TARTF +LIC+CG+AGLA++
Sbjct: 143 ECFRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQ 202

Query: 405 VVERFIKSKTFNFRPFXCGDAGLARKVVERFIKSKTFNFRPFKHSYNAILHGLLVIKQYK 464
            V +F+KSKTFN+                          RPFKHSYNAIL+ LL +KQYK
Sbjct: 203 AVVQFMKSKTFNY--------------------------RPFKHSYNAILNSLLGVKQYK 262

Query: 465 LIEWVYQQMLLDGHSSDILTYNVVLYARCKLGKLDQFHRLLDEMARNGFSPDYHTYNILL 524
           LIEWVY+QML DG S D+LTYN++L+   +LGK+D+F RL DEMAR+GFSPD +TYNILL
Sbjct: 263 LIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILL 322

Query: 525 FVLGKGDKPLAALNLLNHMREVGFDPSILHFTTLIDGLSRAGNLDACKYFFDELGNKGCI 584
            +LGKG+KPLAAL  LNHM+EVG DPS+LH+TTLIDGLSRAGNL+ACKYF DE+   GC 
Sbjct: 323 HILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCR 382

Query: 585 PDVACYTVMITTYTVAGEHEKAKELFDEMVMKGQLPNVLTYNSMIRGFCMAGKFDEAYSM 644
           PDV CYTVMIT Y V+GE +KAKE+F EM +KGQLPNV TYNSMIRG CMAG+F EA  +
Sbjct: 383 PDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWL 442

Query: 645 LAEMETRGCRPNFVVYSTLVSYLRNAGKLSEAHKVITRMVEKGQYAHLVTKFRGYRR 702
           L EME+RGC PNFVVYSTLVSYLR AGKLSEA KVI  MV+KG Y HLV K   YRR
Sbjct: 443 LKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKGHYVHLVPKMMKYRR 473

[Close]
BLAST of Cp4.1LG14g06120 vs. Swiss-Prot
Match: PPR81_ARATH (Pentatricopeptide repeat-containing protein At1g55630 OS=Arabidopsis thaliana GN=At1g55630 PE=2 SV=1)

HSP 1 Score: 484.2 bits (1245), Expect = 2.4e-135
Identity = 232/357 (64.99%), Postives = 276/357 (77.31%), Query Frame = 1 

Query: 345 ENYRHTASSYHMVMKIFAECEEFKAMWRLLDEMTEKGYPVTARTFMILICTCGDAGLARK 404
           EN+RHTA+ YH++MKIFAEC E+KAM RL+DEM + GYP TA TF +LICTCG+AGL   
Sbjct: 146 ENFRHTANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGL--- 205

Query: 405 VVERFIKSKTFNFRPFXCGDAGLARKVVERFIKSKTFNFRPFKHSYNAILHGLLVIKQYK 464
                                  AR VVE+FIKSKTFN+RP+KHSYNAILH LL +KQYK
Sbjct: 206 -----------------------ARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYK 265

Query: 465 LIEWVYQQMLLDGHSSDILTYNVVLYARCKLGKLDQFHRLLDEMARNGFSPDYHTYNILL 524
           LI+WVY+QML DG + D+LTYN+V++A  +LGK D+ +RLLDEM ++GFSPD +TYNILL
Sbjct: 266 LIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILL 325

Query: 525 FVLGKGDKPLAALNLLNHMREVGFDPSILHFTTLIDGLSRAGNLDACKYFFDELGNKGCI 584
             L  G+KPLAALNLLNHMREVG +P ++HFTTLIDGLSRAG L+ACKYF DE    GC 
Sbjct: 326 HHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCT 385

Query: 585 PDVACYTVMITTYTVAGEHEKAKELFDEMVMKGQLPNVLTYNSMIRGFCMAGKFDEAYSM 644
           PDV CYTVMIT Y   GE EKA+E+F EM  KGQLPNV TYNSMIRGFCMAGKF EA ++
Sbjct: 386 PDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACAL 445

Query: 645 LAEMETRGCRPNFVVYSTLVSYLRNAGKLSEAHKVITRMVEKGQYAHLVTKFRGYRR 702
           L EME+RGC PNFVVYSTLV+ L+NAGK+ EAH+V+  MVEKG Y HL++K + YRR
Sbjct: 446 LKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKGHYVHLISKLKKYRR 476

[Close]
BLAST of Cp4.1LG14g06120 vs. Swiss-Prot
Match: PPR18_ARATH (Pentatricopeptide repeat-containing protein At1g06710, mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=3 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 2.7e-49
Identity = 161/626 (25.72%), Postives = 272/626 (43.45%), Query Frame = 1 

Query: 98  LDELQLQVSGVLVREVLKGILRSINVLNKTQCAKLGYKFFVWSSKVENYRHTASSYHMVM 157
           L + + ++S  LV EVL+ I R   V++          FFVW+ +   Y+HTA  Y+ ++
Sbjct: 123 LRQFREKLSESLVIEVLRLIARPSAVIS----------FFVWAGRQIGYKHTAPVYNALV 182

Query: 158 KIFAECEEFKAMWRLLDEMTEKGYPVTARTFMILI---CTCGDAGLARKVVERFIKSKTF 217
            +    ++ K     L ++ +    V      +L+   C  G   +A   +E   + K F
Sbjct: 183 DLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIA---LEELGRLKDF 242

Query: 218 NFRPFKHSYNAILHGLLVIKQYKLIEWVYQQMLLDGHSSDILTYNVVLYARCKLGKLDQF 277
            FRP + +YN ++   L   +      ++++M L     D  T     Y+ CK+GK   +
Sbjct: 243 RFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGK---W 302

Query: 278 HRLLDEMARNGFSPDYHTYNILLFVLGKGDKPLAALNLLNHMREVGFDPSILHFTTLIDG 337
              L  +    F PD   Y  L+  L +      A++ LN MR     P+++ ++TL+ G
Sbjct: 303 REALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCG 362

Query: 338 ---------LSRAGNLXKVENYRHTASSYHMVMKIFAECEEFKAMWRLLDEMTEKGYPVT 397
                      R  N+  +E    +   ++ ++  +    +    ++LL +M + G+   
Sbjct: 363 CLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPG 422

Query: 398 ARTFMILI-CTCGD--------AGLARKVVERFI-------KSKTFNFRPFXCGDAGLAR 457
              + ILI   CGD          LA K     +       K    +F    C  AG   
Sbjct: 423 YVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLC-SAGKYE 482

Query: 458 KVVERFIKSKTFNFRPFKHSYNAILHGLLVIKQYKLIEWVYQQMLLDGHSSDILTYNVVL 517
           K      +     F P   +Y+ +L+ L    + +L   ++++M   G  +D+ TY +++
Sbjct: 483 KAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMV 542

Query: 518 YARCKLGKLDQFHRLLDEMARNGFSPDYHTYNILLFVLGKGDKPLAALNLLNHMREVGFD 577
            + CK G ++Q  +  +EM   G +P+  TY  L+    K  K   A  L   M   G  
Sbjct: 543 DSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCL 602

Query: 578 PSILHFTTLIDGLSRAGNLD-ACKYFFDELGNKGCIPDVACYTVMITTYTVAGEHEKAKE 637
           P+I+ ++ LIDG  +AG ++ AC+ F    G+K  +PDV  Y                  
Sbjct: 603 PNIVTYSALIDGHCKAGQVEKACQIFERMCGSKD-VPDVDMY------------------ 662

Query: 638 LFDEMVMKGQLPNVLTYNSMIRGFCMAGKFDEAYSMLAEMETRGCRPNFVVYSTLVSYLR 695
            F +     + PNV+TY +++ GFC + + +EA  +L  M   GC PN +VY  L+  L 
Sbjct: 663 -FKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLC 711

[Close]
BLAST of Cp4.1LG14g06120 vs. Swiss-Prot
Match: PP445_ARATH (Pentatricopeptide repeat-containing protein At5g65560 OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 1.6e-46
Identity = 148/561 (26.38%), Postives = 256/561 (45.63%), Query Frame = 1 

Query: 131 KLGYKFFVWSSKVENYRHTASSYHMVMKIFAECEEFKAMWRLLDEMTEKGYPVTARTFMI 190
           K    F  W S+   Y+H+  SY  ++ +         ++++             R  MI
Sbjct: 104 KTALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVGVVFKI-------------RLLMI 163

Query: 191 LIC-TCGDAGLARKVVERFIKSKTFN--FRPFKHSYNAILHGLLVIKQYKLIEWVYQQML 250
             C + GDA     +  +  K + F   ++     YN +L+ L        ++ VY +ML
Sbjct: 164 KSCDSVGDALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEML 223

Query: 251 LDGHSSDILTYNVVLYARCKLGKLDQFHRLLDEMARNGFSPDYHTYNILLFVLGKGDKPL 310
            D    +I TYN ++   CKLG +++ ++ + ++   G  PD+ TY  L+    +     
Sbjct: 224 EDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLD 283

Query: 311 AALNLLNHMREVGFDPSILHFTTLIDGLSRAGNLXKVENYRHTASSYHMVMKIFAECEEF 370
           +A  + N M   G   + + +T LI GL  A  + +              M +F + ++ 
Sbjct: 284 SAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEA-------------MDLFVKMKD- 343

Query: 371 KAMWRLLDEMTEKGYPVTARTFMILICT-CGDAGLARKVVERFIKSKTFNFRPFXCGDAG 430
                      ++ +P T RT+ +LI + CG         ER  KS+  N          
Sbjct: 344 -----------DECFP-TVRTYTVLIKSLCGS--------ER--KSEALN---------- 403

Query: 431 LARKVVERFIKSKTFNFRPFKHSYNAILHGLLVIKQYKLIEWVYQQMLLDGHSSDILTYN 490
           L +++ E  IK       P  H+Y  ++  L    +++    +  QML  G   +++TYN
Sbjct: 404 LVKEMEETGIK-------PNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYN 463

Query: 491 VVLYARCKLGKLDQFHRLLDEMARNGFSPDYHTYNILLFVLGKGDKPLAALNLLNHMREV 550
            ++   CK G ++    +++ M     SP+  TYN L+    K +    A+ +LN M E 
Sbjct: 464 ALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVH-KAMGVLNKMLER 523

Query: 551 GFDPSILHFTTLIDGLSRAGNLDACKYFFDELGNKGCIPDVACYTVMITTYTVAGEHEKA 610
              P ++ + +LIDG  R+GN D+       + ++G +PD   YT MI +   +   E+A
Sbjct: 524 KVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEA 583

Query: 611 KELFDEMVMKGQLPNVLTYNSMIRGFCMAGKFDEAYSMLAEMETRGCRPNFVVYSTLVSY 670
            +LFD +  KG  PNV+ Y ++I G+C AGK DEA+ ML +M ++ C PN + ++ L+  
Sbjct: 584 CDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHG 597

Query: 671 LRNAGKLSEAHKVITRMVEKG 688
           L   GKL EA  +  +MV+ G
Sbjct: 644 LCADGKLKEATLLEEKMVKIG 597

[Close]
BLAST of Cp4.1LG14g06120 vs. Swiss-Prot
Match: PP444_ARATH (Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 2.1e-46
Identity = 137/564 (24.29%), Postives = 254/564 (45.04%), Query Frame = 1 

Query: 135 KFFVWSSKVENYRHTASSYHMVMKIFAECEEFKAMWRLLDEMTEKGYPVTARTFMILICT 194
           + F W+     YRH+   Y +++       EFK + RLL +M ++G       F+ ++  
Sbjct: 96  ELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRD 155

Query: 195 CGDAGLARKVVERFIKSKT-FNFRPFKHSYNAILHGLLVIKQYKLIEWVYQQMLLDGHSS 254
              AG   +     ++ +  ++  P   SYN +L  L+    +K+   V+  ML      
Sbjct: 156 YDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPP 215

Query: 255 DILTYNVVLYARCKLGKLDQFHRLLDEMARNGFSPDYHTYNILLFVLGKGDKPLAALNLL 314
            + T+ VV+ A C + ++D    LL +M ++G  P+   Y  L+  L K ++   AL LL
Sbjct: 216 TLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLL 275

Query: 315 NHMREVGFDPSILHFTTLIDGLSRAGNLXKVENYRHTASSYHMVMKIFAECEEFKAMWRL 374
             M  +G  P    F  +I GL +   + +     +      M+++ FA           
Sbjct: 276 EEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVN-----RMLIRGFAP---------- 335

Query: 375 LDEMTEKGYPVTARTFMILICTCGDAGLARKVVERFIKSKTFNFRPFXCGDAGLARKVVE 434
            D++T  GY +        +C  G    A+ +  R  K +   F     G     R    
Sbjct: 336 -DDITY-GYLMNG------LCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDA 395

Query: 435 RFIKSK---TFNFRPFKHSYNAILHGLLVIKQYKLIEWVYQQMLLDGHSSDILTYNVVLY 494
           + + S    ++   P   +YN++++G        L   V   M   G   ++ +Y +++ 
Sbjct: 396 KAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVD 455

Query: 495 ARCKLGKLDQFHRLLDEMARNGFSPDYHTYNILLFVLGKGDKPLAALNLLNHMREVGFDP 554
             CKLGK+D+ + +L+EM+ +G  P+   +N L+    K  +   A+ +   M   G  P
Sbjct: 456 GFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKP 515

Query: 555 SILHFTTLIDGLSRAGNLDACKYFFDELGNKGCIPDVACYTVMITTYTVAGEHEKAKELF 614
            +  F +LI GL     +    +   ++ ++G + +   Y  +I  +   GE ++A++L 
Sbjct: 516 DVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLV 575

Query: 615 DEMVMKGQLPNVLTYNSMIRGFCMAGKFDEAYSMLAEMETRGCRPNFVVYSTLVSYLRNA 674
           +EMV +G   + +TYNS+I+G C AG+ D+A S+  +M   G  P+ +  + L++ L  +
Sbjct: 576 NEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRS 635

Query: 675 GKLSEAHKVITRMVEKGQYAHLVT 695
           G + EA +    MV +G    +VT
Sbjct: 636 GMVEEAVEFQKEMVLRGSTPDIVT 636

[Close]
BLAST of Cp4.1LG14g06120 vs. TrEMBL
Match: A0A0A0L8P4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G182100 PE=4 SV=1)

HSP 1 Score: 605.1 bits (1559), Expect = 1.1e-169
Identity = 283/360 (78.61%), Postives = 315/360 (87.50%), Query Frame = 1 

Query: 343 KVENYRHTASSYHMVMKIFAECEEFKAMWRLLDEMTEKGYPVTARTFMILICTCGDAGLA 402
           ++ENYRHT +SYH++MKIFAECEEFKAMWR+LDEMTEKGYPVTARTFMILICT       
Sbjct: 143 RIENYRHTVNSYHIIMKIFAECEEFKAMWRVLDEMTEKGYPVTARTFMILICT------- 202

Query: 403 RKVVERFIKSKTFNFRPFXCGDAGLARKVVERFIKSKTFNFRPFKHSYNAILHGLLVIKQ 462
                              CG+AGLA++VVERFIKSKTFNFRP+KHSYNAILHGL+++KQ
Sbjct: 203 -------------------CGEAGLAKRVVERFIKSKTFNFRPYKHSYNAILHGLVIVKQ 262

Query: 463 YKLIEWVYQQMLLDGHSSDILTYNVVLYARCKLGKLDQFHRLLDEMARNGFSPDYHTYNI 522
           YKLI WVY QMLLD HS DILTYNV+L++ CKLGKLDQFHRLLDEMAR GFSPD+HTYNI
Sbjct: 263 YKLIGWVYDQMLLDDHSPDILTYNVLLFSSCKLGKLDQFHRLLDEMARKGFSPDFHTYNI 322

Query: 523 LLFVLGKGDKPLAALNLLNHMREVGFDPSILHFTTLIDGLSRAGNLDACKYFFDELGNKG 582
           LL+VLGKGDKPLAALNLLNHMREVGF P++LHFTTLI+GLSRAGNLDACKYFFDELGN G
Sbjct: 323 LLYVLGKGDKPLAALNLLNHMREVGFGPNVLHFTTLINGLSRAGNLDACKYFFDELGNNG 382

Query: 583 CIPDVACYTVMITTYTVAGEHEKAKELFDEMVMKGQLPNVLTYNSMIRGFCMAGKFDEAY 642
           CIPDV CYTVMIT++T AG+HEKA+  FDEM+MKGQLPNV TYNSMIRGFCM GKF EAY
Sbjct: 383 CIPDVVCYTVMITSFTEAGQHEKARAFFDEMIMKGQLPNVFTYNSMIRGFCMVGKFKEAY 442

Query: 643 SMLAEMETRGCRPNFVVYSTLVSYLRNAGKLSEAHKVITRMVEKGQYAHLVTKFRGYRRC 702
           SML+EME+RGCRPNF+VYSTLVSYLRNAGKL EAHKVI +MVE GQYAHL+TKF+GYRRC
Sbjct: 443 SMLSEMESRGCRPNFLVYSTLVSYLRNAGKLGEAHKVIKQMVENGQYAHLMTKFKGYRRC 476

[Close]
BLAST of Cp4.1LG14g06120 vs. TrEMBL
Match: M5XQE6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025794mg PE=4 SV=1)

HSP 1 Score: 558.5 bits (1438), Expect = 1.1e-155
Identity = 263/360 (73.06%), Postives = 303/360 (84.17%), Query Frame = 1 

Query: 343 KVENYRHTASSYHMVMKIFAECEEFKAMWRLLDEMTEKGYPVTARTFMILICTCGDAGLA 402
           ++ENYRHTA++YH++MKIFA+CEEFKAMWRL+DEM EKGYP TA+TF ILICT       
Sbjct: 113 QLENYRHTANTYHLMMKIFADCEEFKAMWRLVDEMIEKGYPTTAQTFNILICT------- 172

Query: 403 RKVVERFIKSKTFNFRPFXCGDAGLARKVVERFIKSKTFNFRPFKHSYNAILHGLLVIKQ 462
                              CG+AGLA+KVVERFIKSKTFN+RPFKHSYNAILH L+V+KQ
Sbjct: 173 -------------------CGEAGLAKKVVERFIKSKTFNYRPFKHSYNAILHSLVVVKQ 232

Query: 463 YKLIEWVYQQMLLDGHSSDILTYNVVLYARCKLGKLDQFHRLLDEMARNGFSPDYHTYNI 522
           YKLIEWVYQQML DGH +DILTYNV++YA+ +LGKLDQFHRLL+EM R+GF+PD HTYNI
Sbjct: 233 YKLIEWVYQQMLADGHCTDILTYNVMMYAKYRLGKLDQFHRLLEEMGRSGFAPDLHTYNI 292

Query: 523 LLFVLGKGDKPLAALNLLNHMREVGFDPSILHFTTLIDGLSRAGNLDACKYFFDELGNKG 582
           LL VLGKGDKPLAALNLLNHM+EVG DPS+LHFTTLIDGLSR+GNLDACKYFFDE+    
Sbjct: 293 LLHVLGKGDKPLAALNLLNHMKEVGLDPSVLHFTTLIDGLSRSGNLDACKYFFDEMIKHE 352

Query: 583 CIPDVACYTVMITTYTVAGEHEKAKELFDEMVMKGQLPNVLTYNSMIRGFCMAGKFDEAY 642
           C PDV CYTVMI+ Y VAGE EKA+ +FDEM+  GQLPNV TYN+MIRG CMAGKF+EA 
Sbjct: 353 CFPDVVCYTVMISGYIVAGELEKAQGVFDEMIPNGQLPNVFTYNAMIRGLCMAGKFEEAC 412

Query: 643 SMLAEMETRGCRPNFVVYSTLVSYLRNAGKLSEAHKVITRMVEKGQYAHLVTKFRGYRRC 702
           SML +ME+RGC PNF VYSTLVSYLRNAGKL++AH+VIT MVEKGQY HL++KF+GYRRC
Sbjct: 413 SMLKDMESRGCNPNFTVYSTLVSYLRNAGKLAKAHEVITHMVEKGQYTHLLSKFKGYRRC 446

[Close]
BLAST of Cp4.1LG14g06120 vs. TrEMBL
Match: V4S4A4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10004849mg PE=4 SV=1)

HSP 1 Score: 553.5 bits (1425), Expect = 3.6e-154
Identity = 262/358 (73.18%), Postives = 301/358 (84.08%), Query Frame = 1 

Query: 345 ENYRHTASSYHMVMKIFAECEEFKAMWRLLDEMTEKGYPVTARTFMILICTCGDAGLARK 404
           EN+RHTA+SYH++MKIFA+CEEFKAMWRL+DEM E G+P TARTF ILICT         
Sbjct: 156 ENFRHTANSYHLIMKIFADCEEFKAMWRLVDEMIENGFPTTARTFNILICT--------- 215

Query: 405 VVERFIKSKTFNFRPFXCGDAGLARKVVERFIKSKTFNFRPFKHSYNAILHGLLVIKQYK 464
                            CG+ GLARKVVERFIKSK FNFRPFK+SYNAILH LL I+QYK
Sbjct: 216 -----------------CGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK 275

Query: 465 LIEWVYQQMLLDGHSSDILTYNVVLYARCKLGKLDQFHRLLDEMARNGFSPDYHTYNILL 524
           LIEWVYQQM  +G++ DILTYN+V+ A+ +LGKLDQFHRLLDEM R+GFSPD+HTYNILL
Sbjct: 276 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 335

Query: 525 FVLGKGDKPLAALNLLNHMREVGFDPSILHFTTLIDGLSRAGNLDACKYFFDELGNKGCI 584
            VLGKGDKPLAALNLLNHM+EVGFDPS+LHFTTL+DGLSRAGNLDACKYFFDE+ NKGC+
Sbjct: 336 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 395

Query: 585 PDVACYTVMITTYTVAGEHEKAKELFDEMVMKGQLPNVLTYNSMIRGFCMAGKFDEAYSM 644
           PDV CYTVMIT+Y  AGE EKA++LFD M+ KGQLPNV TYNSMIRGFCMAGKFDEA +M
Sbjct: 396 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 455

Query: 645 LAEMETRGCRPNFVVYSTLVSYLRNAGKLSEAHKVITRMVEKGQYAHLVTKFRGYRRC 703
           + EME+RGC PNF+VY+TLVS LRNAGKL+EAH+VI  MVEKG+Y HLV+KF+ Y+RC
Sbjct: 456 MKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKFKRYKRC 487

[Close]
BLAST of Cp4.1LG14g06120 vs. TrEMBL
Match: W9S7I4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_015785 PE=4 SV=1)

HSP 1 Score: 549.7 bits (1415), Expect = 5.3e-153
Identity = 262/357 (73.39%), Postives = 293/357 (82.07%), Query Frame = 1 

Query: 346 NYRHTASSYHMVMKIFAECEEFKAMWRLLDEMTEKGYPVTARTFMILICTCGDAGLARKV 405
           NYRHTA+SYH+++KIFAECEEFKAMWRL+DEM E+G+P TART  ILICT          
Sbjct: 168 NYRHTANSYHLLIKIFAECEEFKAMWRLVDEMIERGFPTTARTLNILICT---------- 227

Query: 406 VERFIKSKTFNFRPFXCGDAGLARKVVERFIKSKTFNFRPFKHSYNAILHGLLVIKQYKL 465
                           CG+AGLARKVVERFIKSKTFNFRPFKHSYNAILH LLV  QYKL
Sbjct: 228 ----------------CGEAGLARKVVERFIKSKTFNFRPFKHSYNAILHCLLVTNQYKL 287

Query: 466 IEWVYQQMLLDGHSSDILTYNVVLYARCKLGKLDQFHRLLDEMARNGFSPDYHTYNILLF 525
           IEWVYQQML DG S DILTYNV++  + +LGKLDQFHRLLDEM R GFSPD HTYNILL 
Sbjct: 288 IEWVYQQMLADGFSPDILTYNVLMLTKYRLGKLDQFHRLLDEMGRRGFSPDLHTYNILLH 347

Query: 526 VLGKGDKPLAALNLLNHMREVGFDPSILHFTTLIDGLSRAGNLDACKYFFDELGNKGCIP 585
           VLGKGDKPLAALNLLNHM+E G DP +LHFTTLIDGLSRAGNLDAC++FFDE+   GCIP
Sbjct: 348 VLGKGDKPLAALNLLNHMKETGIDPGVLHFTTLIDGLSRAGNLDACRFFFDEMPKNGCIP 407

Query: 586 DVACYTVMITTYTVAGEHEKAKELFDEMVMKGQLPNVLTYNSMIRGFCMAGKFDEAYSML 645
           DV CYTVMIT Y VAGE EKA+ +FDEM+ KGQ+PNV TYNSMIRG CMAGKF+EA SML
Sbjct: 408 DVVCYTVMITGYVVAGELEKAQSIFDEMITKGQIPNVFTYNSMIRGLCMAGKFEEACSML 467

Query: 646 AEMETRGCRPNFVVYSTLVSYLRNAGKLSEAHKVITRMVEKGQYAHLVTKFRGYRRC 703
            +ME+RGC PNF+VY+TLVS LRNAGKLSEAH+V+  MVEKGQY HL++KF+GYRRC
Sbjct: 468 KDMESRGCNPNFLVYTTLVSNLRNAGKLSEAHQVVKHMVEKGQYVHLLSKFKGYRRC 498

[Close]
BLAST of Cp4.1LG14g06120 vs. TrEMBL
Match: M1C1Y3_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400022513 PE=4 SV=1)

HSP 1 Score: 542.7 bits (1397), Expect = 6.4e-151
Identity = 256/358 (71.51%), Postives = 298/358 (83.24%), Query Frame = 1 

Query: 345 ENYRHTASSYHMVMKIFAECEEFKAMWRLLDEMTEKGYPVTARTFMILICTCGDAGLARK 404
           ENYRHTA+SYH++MKIFAE +EFKAMWRL+DEM EKGYP TARTF +LICT         
Sbjct: 160 ENYRHTANSYHLIMKIFAESDEFKAMWRLVDEMIEKGYPTTARTFNLLICT--------- 219

Query: 405 VVERFIKSKTFNFRPFXCGDAGLARKVVERFIKSKTFNFRPFKHSYNAILHGLLVIKQYK 464
                            CG+AGLARKVVERFIKSKTFN+RPF+HS+NAILH LL + QY+
Sbjct: 220 -----------------CGEAGLARKVVERFIKSKTFNYRPFRHSFNAILHSLLGVNQYR 279

Query: 465 LIEWVYQQMLLDGHSSDILTYNVVLYARCKLGKLDQFHRLLDEMARNGFSPDYHTYNILL 524
           LIEWVYQQML++GH  DILTYN++L ++ +LGKLDQFHRLLDEM RNGFSPD++T+NILL
Sbjct: 280 LIEWVYQQMLVEGHIPDILTYNILLCSKYRLGKLDQFHRLLDEMGRNGFSPDFYTFNILL 339

Query: 525 FVLGKGDKPLAALNLLNHMREVGFDPSILHFTTLIDGLSRAGNLDACKYFFDELGNKGCI 584
            VLGKGDKPLAA+NLLNHM+EVG++PSILHFTTLIDGLSRAGNLDACKYFF+E+  +GC+
Sbjct: 340 HVLGKGDKPLAAVNLLNHMKEVGYEPSILHFTTLIDGLSRAGNLDACKYFFEEMIRQGCV 399

Query: 585 PDVACYTVMITTYTVAGEHEKAKELFDEMVMKGQLPNVLTYNSMIRGFCMAGKFDEAYSM 644
           PDV CYTVMIT Y VAGE +KA+ELF +M++ GQLPNV TYNSMIRG CMA KFDEA  M
Sbjct: 400 PDVVCYTVMITGYVVAGELDKAQELFTDMIVNGQLPNVFTYNSMIRGLCMAEKFDEACMM 459

Query: 645 LAEMETRGCRPNFVVYSTLVSYLRNAGKLSEAHKVITRMVEKGQYAHLVTKFRGYRRC 703
           + EME RGC PNF+VYSTLVSYL+NAGKLS+AH+VI  MV+KGQY HLV KF+ YRRC
Sbjct: 460 VKEMELRGCNPNFMVYSTLVSYLKNAGKLSKAHEVIRHMVDKGQYIHLVPKFKRYRRC 491

[Close]
BLAST of Cp4.1LG14g06120 vs. TAIR10
Match: AT3G60050.1 (AT3G60050.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 491.9 bits (1265), Expect = 6.6e-139
Identity = 236/357 (66.11%), Postives = 279/357 (78.15%), Query Frame = 1 

Query: 345 ENYRHTASSYHMVMKIFAECEEFKAMWRLLDEMTEKGYPVTARTFMILICTCGDAGLARK 404
           E +RHT +SYH++MKIFAEC E+KAMWRL+DEM + G+P TARTF +LIC+CG+AGLA++
Sbjct: 143 ECFRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQ 202

Query: 405 VVERFIKSKTFNFRPFXCGDAGLARKVVERFIKSKTFNFRPFKHSYNAILHGLLVIKQYK 464
            V +F+KSKTFN+                          RPFKHSYNAIL+ LL +KQYK
Sbjct: 203 AVVQFMKSKTFNY--------------------------RPFKHSYNAILNSLLGVKQYK 262

Query: 465 LIEWVYQQMLLDGHSSDILTYNVVLYARCKLGKLDQFHRLLDEMARNGFSPDYHTYNILL 524
           LIEWVY+QML DG S D+LTYN++L+   +LGK+D+F RL DEMAR+GFSPD +TYNILL
Sbjct: 263 LIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILL 322

Query: 525 FVLGKGDKPLAALNLLNHMREVGFDPSILHFTTLIDGLSRAGNLDACKYFFDELGNKGCI 584
            +LGKG+KPLAAL  LNHM+EVG DPS+LH+TTLIDGLSRAGNL+ACKYF DE+   GC 
Sbjct: 323 HILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCR 382

Query: 585 PDVACYTVMITTYTVAGEHEKAKELFDEMVMKGQLPNVLTYNSMIRGFCMAGKFDEAYSM 644
           PDV CYTVMIT Y V+GE +KAKE+F EM +KGQLPNV TYNSMIRG CMAG+F EA  +
Sbjct: 383 PDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWL 442

Query: 645 LAEMETRGCRPNFVVYSTLVSYLRNAGKLSEAHKVITRMVEKGQYAHLVTKFRGYRR 702
           L EME+RGC PNFVVYSTLVSYLR AGKLSEA KVI  MV+KG Y HLV K   YRR
Sbjct: 443 LKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKGHYVHLVPKMMKYRR 473

[Close]
BLAST of Cp4.1LG14g06120 vs. TAIR10
Match: AT1G55630.1 (AT1G55630.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 484.2 bits (1245), Expect = 1.4e-136
Identity = 232/357 (64.99%), Postives = 276/357 (77.31%), Query Frame = 1 

Query: 345 ENYRHTASSYHMVMKIFAECEEFKAMWRLLDEMTEKGYPVTARTFMILICTCGDAGLARK 404
           EN+RHTA+ YH++MKIFAEC E+KAM RL+DEM + GYP TA TF +LICTCG+AGL   
Sbjct: 146 ENFRHTANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGL--- 205

Query: 405 VVERFIKSKTFNFRPFXCGDAGLARKVVERFIKSKTFNFRPFKHSYNAILHGLLVIKQYK 464
                                  AR VVE+FIKSKTFN+RP+KHSYNAILH LL +KQYK
Sbjct: 206 -----------------------ARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYK 265

Query: 465 LIEWVYQQMLLDGHSSDILTYNVVLYARCKLGKLDQFHRLLDEMARNGFSPDYHTYNILL 524
           LI+WVY+QML DG + D+LTYN+V++A  +LGK D+ +RLLDEM ++GFSPD +TYNILL
Sbjct: 266 LIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILL 325

Query: 525 FVLGKGDKPLAALNLLNHMREVGFDPSILHFTTLIDGLSRAGNLDACKYFFDELGNKGCI 584
             L  G+KPLAALNLLNHMREVG +P ++HFTTLIDGLSRAG L+ACKYF DE    GC 
Sbjct: 326 HHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCT 385

Query: 585 PDVACYTVMITTYTVAGEHEKAKELFDEMVMKGQLPNVLTYNSMIRGFCMAGKFDEAYSM 644
           PDV CYTVMIT Y   GE EKA+E+F EM  KGQLPNV TYNSMIRGFCMAGKF EA ++
Sbjct: 386 PDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACAL 445

Query: 645 LAEMETRGCRPNFVVYSTLVSYLRNAGKLSEAHKVITRMVEKGQYAHLVTKFRGYRR 702
           L EME+RGC PNFVVYSTLV+ L+NAGK+ EAH+V+  MVEKG Y HL++K + YRR
Sbjct: 446 LKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKGHYVHLISKLKKYRR 476

[Close]
BLAST of Cp4.1LG14g06120 vs. TAIR10
Match: AT1G06710.1 (AT1G06710.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 198.4 bits (503), Expect = 1.5e-50
Identity = 161/626 (25.72%), Postives = 272/626 (43.45%), Query Frame = 1 

Query: 98  LDELQLQVSGVLVREVLKGILRSINVLNKTQCAKLGYKFFVWSSKVENYRHTASSYHMVM 157
           L + + ++S  LV EVL+ I R   V++          FFVW+ +   Y+HTA  Y+ ++
Sbjct: 123 LRQFREKLSESLVIEVLRLIARPSAVIS----------FFVWAGRQIGYKHTAPVYNALV 182

Query: 158 KIFAECEEFKAMWRLLDEMTEKGYPVTARTFMILI---CTCGDAGLARKVVERFIKSKTF 217
            +    ++ K     L ++ +    V      +L+   C  G   +A   +E   + K F
Sbjct: 183 DLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIA---LEELGRLKDF 242

Query: 218 NFRPFKHSYNAILHGLLVIKQYKLIEWVYQQMLLDGHSSDILTYNVVLYARCKLGKLDQF 277
            FRP + +YN ++   L   +      ++++M L     D  T     Y+ CK+GK   +
Sbjct: 243 RFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGK---W 302

Query: 278 HRLLDEMARNGFSPDYHTYNILLFVLGKGDKPLAALNLLNHMREVGFDPSILHFTTLIDG 337
              L  +    F PD   Y  L+  L +      A++ LN MR     P+++ ++TL+ G
Sbjct: 303 REALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCG 362

Query: 338 ---------LSRAGNLXKVENYRHTASSYHMVMKIFAECEEFKAMWRLLDEMTEKGYPVT 397
                      R  N+  +E    +   ++ ++  +    +    ++LL +M + G+   
Sbjct: 363 CLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPG 422

Query: 398 ARTFMILI-CTCGD--------AGLARKVVERFI-------KSKTFNFRPFXCGDAGLAR 457
              + ILI   CGD          LA K     +       K    +F    C  AG   
Sbjct: 423 YVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLC-SAGKYE 482

Query: 458 KVVERFIKSKTFNFRPFKHSYNAILHGLLVIKQYKLIEWVYQQMLLDGHSSDILTYNVVL 517
           K      +     F P   +Y+ +L+ L    + +L   ++++M   G  +D+ TY +++
Sbjct: 483 KAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMV 542

Query: 518 YARCKLGKLDQFHRLLDEMARNGFSPDYHTYNILLFVLGKGDKPLAALNLLNHMREVGFD 577
            + CK G ++Q  +  +EM   G +P+  TY  L+    K  K   A  L   M   G  
Sbjct: 543 DSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCL 602

Query: 578 PSILHFTTLIDGLSRAGNLD-ACKYFFDELGNKGCIPDVACYTVMITTYTVAGEHEKAKE 637
           P+I+ ++ LIDG  +AG ++ AC+ F    G+K  +PDV  Y                  
Sbjct: 603 PNIVTYSALIDGHCKAGQVEKACQIFERMCGSKD-VPDVDMY------------------ 662

Query: 638 LFDEMVMKGQLPNVLTYNSMIRGFCMAGKFDEAYSMLAEMETRGCRPNFVVYSTLVSYLR 695
            F +     + PNV+TY +++ GFC + + +EA  +L  M   GC PN +VY  L+  L 
Sbjct: 663 -FKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLC 711

[Close]
BLAST of Cp4.1LG14g06120 vs. TAIR10
Match: AT5G65560.1 (AT5G65560.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 189.1 bits (479), Expect = 9.2e-48
Identity = 148/561 (26.38%), Postives = 256/561 (45.63%), Query Frame = 1 

Query: 131 KLGYKFFVWSSKVENYRHTASSYHMVMKIFAECEEFKAMWRLLDEMTEKGYPVTARTFMI 190
           K    F  W S+   Y+H+  SY  ++ +         ++++             R  MI
Sbjct: 104 KTALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVGVVFKI-------------RLLMI 163

Query: 191 LIC-TCGDAGLARKVVERFIKSKTFN--FRPFKHSYNAILHGLLVIKQYKLIEWVYQQML 250
             C + GDA     +  +  K + F   ++     YN +L+ L        ++ VY +ML
Sbjct: 164 KSCDSVGDALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEML 223

Query: 251 LDGHSSDILTYNVVLYARCKLGKLDQFHRLLDEMARNGFSPDYHTYNILLFVLGKGDKPL 310
            D    +I TYN ++   CKLG +++ ++ + ++   G  PD+ TY  L+    +     
Sbjct: 224 EDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLD 283

Query: 311 AALNLLNHMREVGFDPSILHFTTLIDGLSRAGNLXKVENYRHTASSYHMVMKIFAECEEF 370
           +A  + N M   G   + + +T LI GL  A  + +              M +F + ++ 
Sbjct: 284 SAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEA-------------MDLFVKMKD- 343

Query: 371 KAMWRLLDEMTEKGYPVTARTFMILICT-CGDAGLARKVVERFIKSKTFNFRPFXCGDAG 430
                      ++ +P T RT+ +LI + CG         ER  KS+  N          
Sbjct: 344 -----------DECFP-TVRTYTVLIKSLCGS--------ER--KSEALN---------- 403

Query: 431 LARKVVERFIKSKTFNFRPFKHSYNAILHGLLVIKQYKLIEWVYQQMLLDGHSSDILTYN 490
           L +++ E  IK       P  H+Y  ++  L    +++    +  QML  G   +++TYN
Sbjct: 404 LVKEMEETGIK-------PNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYN 463

Query: 491 VVLYARCKLGKLDQFHRLLDEMARNGFSPDYHTYNILLFVLGKGDKPLAALNLLNHMREV 550
            ++   CK G ++    +++ M     SP+  TYN L+    K +    A+ +LN M E 
Sbjct: 464 ALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVH-KAMGVLNKMLER 523

Query: 551 GFDPSILHFTTLIDGLSRAGNLDACKYFFDELGNKGCIPDVACYTVMITTYTVAGEHEKA 610
              P ++ + +LIDG  R+GN D+       + ++G +PD   YT MI +   +   E+A
Sbjct: 524 KVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEA 583

Query: 611 KELFDEMVMKGQLPNVLTYNSMIRGFCMAGKFDEAYSMLAEMETRGCRPNFVVYSTLVSY 670
            +LFD +  KG  PNV+ Y ++I G+C AGK DEA+ ML +M ++ C PN + ++ L+  
Sbjct: 584 CDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHG 597

Query: 671 LRNAGKLSEAHKVITRMVEKG 688
           L   GKL EA  +  +MV+ G
Sbjct: 644 LCADGKLKEATLLEEKMVKIG 597

[Close]
BLAST of Cp4.1LG14g06120 vs. TAIR10
Match: AT5G64320.1 (AT5G64320.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 188.7 bits (478), Expect = 1.2e-47
Identity = 137/564 (24.29%), Postives = 254/564 (45.04%), Query Frame = 1 

Query: 135 KFFVWSSKVENYRHTASSYHMVMKIFAECEEFKAMWRLLDEMTEKGYPVTARTFMILICT 194
           + F W+     YRH+   Y +++       EFK + RLL +M ++G       F+ ++  
Sbjct: 96  ELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRD 155

Query: 195 CGDAGLARKVVERFIKSKT-FNFRPFKHSYNAILHGLLVIKQYKLIEWVYQQMLLDGHSS 254
              AG   +     ++ +  ++  P   SYN +L  L+    +K+   V+  ML      
Sbjct: 156 YDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPP 215

Query: 255 DILTYNVVLYARCKLGKLDQFHRLLDEMARNGFSPDYHTYNILLFVLGKGDKPLAALNLL 314
            + T+ VV+ A C + ++D    LL +M ++G  P+   Y  L+  L K ++   AL LL
Sbjct: 216 TLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLL 275

Query: 315 NHMREVGFDPSILHFTTLIDGLSRAGNLXKVENYRHTASSYHMVMKIFAECEEFKAMWRL 374
             M  +G  P    F  +I GL +   + +     +      M+++ FA           
Sbjct: 276 EEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVN-----RMLIRGFAP---------- 335

Query: 375 LDEMTEKGYPVTARTFMILICTCGDAGLARKVVERFIKSKTFNFRPFXCGDAGLARKVVE 434
            D++T  GY +        +C  G    A+ +  R  K +   F     G     R    
Sbjct: 336 -DDITY-GYLMNG------LCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDA 395

Query: 435 RFIKSK---TFNFRPFKHSYNAILHGLLVIKQYKLIEWVYQQMLLDGHSSDILTYNVVLY 494
           + + S    ++   P   +YN++++G        L   V   M   G   ++ +Y +++ 
Sbjct: 396 KAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVD 455

Query: 495 ARCKLGKLDQFHRLLDEMARNGFSPDYHTYNILLFVLGKGDKPLAALNLLNHMREVGFDP 554
             CKLGK+D+ + +L+EM+ +G  P+   +N L+    K  +   A+ +   M   G  P
Sbjct: 456 GFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKP 515

Query: 555 SILHFTTLIDGLSRAGNLDACKYFFDELGNKGCIPDVACYTVMITTYTVAGEHEKAKELF 614
            +  F +LI GL     +    +   ++ ++G + +   Y  +I  +   GE ++A++L 
Sbjct: 516 DVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLV 575

Query: 615 DEMVMKGQLPNVLTYNSMIRGFCMAGKFDEAYSMLAEMETRGCRPNFVVYSTLVSYLRNA 674
           +EMV +G   + +TYNS+I+G C AG+ D+A S+  +M   G  P+ +  + L++ L  +
Sbjct: 576 NEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRS 635

Query: 675 GKLSEAHKVITRMVEKGQYAHLVT 695
           G + EA +    MV +G    +VT
Sbjct: 636 GMVEEAVEFQKEMVLRGSTPDIVT 636

[Close]
BLAST of Cp4.1LG14g06120 vs. NCBI nr
Match: gi|659077478|ref|XP_008439226.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g55630-like [Cucumis melo])

HSP 1 Score: 620.5 bits (1599), Expect = 3.5e-174
Identity = 293/360 (81.39%), Postives = 318/360 (88.33%), Query Frame = 1 

Query: 343 KVENYRHTASSYHMVMKIFAECEEFKAMWRLLDEMTEKGYPVTARTFMILICTCGDAGLA 402
           ++ENYRHT  SYHM+MKIFAECEEFKAMWRLLDEMTEKGYPVTARTFMILICT       
Sbjct: 143 RIENYRHTVKSYHMIMKIFAECEEFKAMWRLLDEMTEKGYPVTARTFMILICT------- 202

Query: 403 RKVVERFIKSKTFNFRPFXCGDAGLARKVVERFIKSKTFNFRPFKHSYNAILHGLLVIKQ 462
                              CGDAGLA+KVVERFIKSKTFNFRP+KHSYNAILHGL+V+KQ
Sbjct: 203 -------------------CGDAGLAKKVVERFIKSKTFNFRPYKHSYNAILHGLVVVKQ 262

Query: 463 YKLIEWVYQQMLLDGHSSDILTYNVVLYARCKLGKLDQFHRLLDEMARNGFSPDYHTYNI 522
           YKLIEWVY+QMLLDGH  DILTYNV+L++RCKLGKLDQFHRLLDEMAR GFSPD+HTYNI
Sbjct: 263 YKLIEWVYEQMLLDGHGPDILTYNVLLFSRCKLGKLDQFHRLLDEMARKGFSPDFHTYNI 322

Query: 523 LLFVLGKGDKPLAALNLLNHMREVGFDPSILHFTTLIDGLSRAGNLDACKYFFDELGNKG 582
           LL+VLGKGDKPLAALNLLNHMREVGF P+ILHFTTLI+GLSRAGNLDACKYFFDELGN  
Sbjct: 323 LLYVLGKGDKPLAALNLLNHMREVGFGPNILHFTTLINGLSRAGNLDACKYFFDELGNHD 382

Query: 583 CIPDVACYTVMITTYTVAGEHEKAKELFDEMVMKGQLPNVLTYNSMIRGFCMAGKFDEAY 642
           CIPDV CYTVMIT+YT AG+HEKA+  FDEM+MKGQLPNV TYNSMIRGFCM GKF EAY
Sbjct: 383 CIPDVVCYTVMITSYTEAGQHEKARAFFDEMIMKGQLPNVFTYNSMIRGFCMVGKFKEAY 442

Query: 643 SMLAEMETRGCRPNFVVYSTLVSYLRNAGKLSEAHKVITRMVEKGQYAHLVTKFRGYRRC 702
           SML+EME+RGCRPNF+VYSTLVSYLRNAGKL+EAHKVITRMVE GQYAHL+TKF+GYRRC
Sbjct: 443 SMLSEMESRGCRPNFLVYSTLVSYLRNAGKLAEAHKVITRMVENGQYAHLMTKFKGYRRC 476

[Close]
BLAST of Cp4.1LG14g06120 vs. NCBI nr
Match: gi|449446161|ref|XP_004140840.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g55630-like [Cucumis sativus])

HSP 1 Score: 605.1 bits (1559), Expect = 1.5e-169
Identity = 283/360 (78.61%), Postives = 315/360 (87.50%), Query Frame = 1 

Query: 343 KVENYRHTASSYHMVMKIFAECEEFKAMWRLLDEMTEKGYPVTARTFMILICTCGDAGLA 402
           ++ENYRHT +SYH++MKIFAECEEFKAMWR+LDEMTEKGYPVTARTFMILICT       
Sbjct: 143 RIENYRHTVNSYHIIMKIFAECEEFKAMWRVLDEMTEKGYPVTARTFMILICT------- 202

Query: 403 RKVVERFIKSKTFNFRPFXCGDAGLARKVVERFIKSKTFNFRPFKHSYNAILHGLLVIKQ 462
                              CG+AGLA++VVERFIKSKTFNFRP+KHSYNAILHGL+++KQ
Sbjct: 203 -------------------CGEAGLAKRVVERFIKSKTFNFRPYKHSYNAILHGLVIVKQ 262

Query: 463 YKLIEWVYQQMLLDGHSSDILTYNVVLYARCKLGKLDQFHRLLDEMARNGFSPDYHTYNI 522
           YKLI WVY QMLLD HS DILTYNV+L++ CKLGKLDQFHRLLDEMAR GFSPD+HTYNI
Sbjct: 263 YKLIGWVYDQMLLDDHSPDILTYNVLLFSSCKLGKLDQFHRLLDEMARKGFSPDFHTYNI 322

Query: 523 LLFVLGKGDKPLAALNLLNHMREVGFDPSILHFTTLIDGLSRAGNLDACKYFFDELGNKG 582
           LL+VLGKGDKPLAALNLLNHMREVGF P++LHFTTLI+GLSRAGNLDACKYFFDELGN G
Sbjct: 323 LLYVLGKGDKPLAALNLLNHMREVGFGPNVLHFTTLINGLSRAGNLDACKYFFDELGNNG 382

Query: 583 CIPDVACYTVMITTYTVAGEHEKAKELFDEMVMKGQLPNVLTYNSMIRGFCMAGKFDEAY 642
           CIPDV CYTVMIT++T AG+HEKA+  FDEM+MKGQLPNV TYNSMIRGFCM GKF EAY
Sbjct: 383 CIPDVVCYTVMITSFTEAGQHEKARAFFDEMIMKGQLPNVFTYNSMIRGFCMVGKFKEAY 442

Query: 643 SMLAEMETRGCRPNFVVYSTLVSYLRNAGKLSEAHKVITRMVEKGQYAHLVTKFRGYRRC 702
           SML+EME+RGCRPNF+VYSTLVSYLRNAGKL EAHKVI +MVE GQYAHL+TKF+GYRRC
Sbjct: 443 SMLSEMESRGCRPNFLVYSTLVSYLRNAGKLGEAHKVIKQMVENGQYAHLMTKFKGYRRC 476

[Close]
BLAST of Cp4.1LG14g06120 vs. NCBI nr
Match: gi|596041207|ref|XP_007220061.1| (hypothetical protein PRUPE_ppa025794mg [Prunus persica])

HSP 1 Score: 558.5 bits (1438), Expect = 1.6e-155
Identity = 263/360 (73.06%), Postives = 303/360 (84.17%), Query Frame = 1 

Query: 343 KVENYRHTASSYHMVMKIFAECEEFKAMWRLLDEMTEKGYPVTARTFMILICTCGDAGLA 402
           ++ENYRHTA++YH++MKIFA+CEEFKAMWRL+DEM EKGYP TA+TF ILICT       
Sbjct: 113 QLENYRHTANTYHLMMKIFADCEEFKAMWRLVDEMIEKGYPTTAQTFNILICT------- 172

Query: 403 RKVVERFIKSKTFNFRPFXCGDAGLARKVVERFIKSKTFNFRPFKHSYNAILHGLLVIKQ 462
                              CG+AGLA+KVVERFIKSKTFN+RPFKHSYNAILH L+V+KQ
Sbjct: 173 -------------------CGEAGLAKKVVERFIKSKTFNYRPFKHSYNAILHSLVVVKQ 232

Query: 463 YKLIEWVYQQMLLDGHSSDILTYNVVLYARCKLGKLDQFHRLLDEMARNGFSPDYHTYNI 522
           YKLIEWVYQQML DGH +DILTYNV++YA+ +LGKLDQFHRLL+EM R+GF+PD HTYNI
Sbjct: 233 YKLIEWVYQQMLADGHCTDILTYNVMMYAKYRLGKLDQFHRLLEEMGRSGFAPDLHTYNI 292

Query: 523 LLFVLGKGDKPLAALNLLNHMREVGFDPSILHFTTLIDGLSRAGNLDACKYFFDELGNKG 582
           LL VLGKGDKPLAALNLLNHM+EVG DPS+LHFTTLIDGLSR+GNLDACKYFFDE+    
Sbjct: 293 LLHVLGKGDKPLAALNLLNHMKEVGLDPSVLHFTTLIDGLSRSGNLDACKYFFDEMIKHE 352

Query: 583 CIPDVACYTVMITTYTVAGEHEKAKELFDEMVMKGQLPNVLTYNSMIRGFCMAGKFDEAY 642
           C PDV CYTVMI+ Y VAGE EKA+ +FDEM+  GQLPNV TYN+MIRG CMAGKF+EA 
Sbjct: 353 CFPDVVCYTVMISGYIVAGELEKAQGVFDEMIPNGQLPNVFTYNAMIRGLCMAGKFEEAC 412

Query: 643 SMLAEMETRGCRPNFVVYSTLVSYLRNAGKLSEAHKVITRMVEKGQYAHLVTKFRGYRRC 702
           SML +ME+RGC PNF VYSTLVSYLRNAGKL++AH+VIT MVEKGQY HL++KF+GYRRC
Sbjct: 413 SMLKDMESRGCNPNFTVYSTLVSYLRNAGKLAKAHEVITHMVEKGQYTHLLSKFKGYRRC 446

[Close]
BLAST of Cp4.1LG14g06120 vs. NCBI nr
Match: gi|645257085|ref|XP_008234250.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g60050-like [Prunus mume])

HSP 1 Score: 557.0 bits (1434), Expect = 4.7e-155
Identity = 263/360 (73.06%), Postives = 303/360 (84.17%), Query Frame = 1 

Query: 343 KVENYRHTASSYHMVMKIFAECEEFKAMWRLLDEMTEKGYPVTARTFMILICTCGDAGLA 402
           ++ENYRHTA++YH++MKIFA+CEEFKAMWRL+DEM EKGYP TA+TF ILI T       
Sbjct: 154 QLENYRHTANTYHLMMKIFADCEEFKAMWRLVDEMIEKGYPTTAQTFSILIRT------- 213

Query: 403 RKVVERFIKSKTFNFRPFXCGDAGLARKVVERFIKSKTFNFRPFKHSYNAILHGLLVIKQ 462
                              CG+AGLA+KVVERFIKSKTFN+RPFKHSYNAILH L+V+KQ
Sbjct: 214 -------------------CGEAGLAKKVVERFIKSKTFNYRPFKHSYNAILHSLVVVKQ 273

Query: 463 YKLIEWVYQQMLLDGHSSDILTYNVVLYARCKLGKLDQFHRLLDEMARNGFSPDYHTYNI 522
           YKLIEWVYQQML DGH +DILTYNV++YA+ +LGKLDQFHRLL+EM R+GF+PD+HTYNI
Sbjct: 274 YKLIEWVYQQMLADGHCTDILTYNVMMYAKYRLGKLDQFHRLLEEMGRSGFAPDFHTYNI 333

Query: 523 LLFVLGKGDKPLAALNLLNHMREVGFDPSILHFTTLIDGLSRAGNLDACKYFFDELGNKG 582
           LL VLGKGDKPLAALNLLNHM+EVGFDPS+LHFTTLIDGLSRAGNLDACKYFFDE+    
Sbjct: 334 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLIDGLSRAGNLDACKYFFDEMIKHE 393

Query: 583 CIPDVACYTVMITTYTVAGEHEKAKELFDEMVMKGQLPNVLTYNSMIRGFCMAGKFDEAY 642
           C PDV CYTVMI+ Y VAGE EKA+ +FDEM+  GQLPNV TYN+MIRG CMAGKF+EA 
Sbjct: 394 CFPDVVCYTVMISGYIVAGELEKAQGVFDEMIPNGQLPNVFTYNAMIRGLCMAGKFEEAC 453

Query: 643 SMLAEMETRGCRPNFVVYSTLVSYLRNAGKLSEAHKVITRMVEKGQYAHLVTKFRGYRRC 702
           SML +ME+RGC PNF VYSTLVSYLRNAGK ++AH+VIT MVEKGQY HL++KF+GYRRC
Sbjct: 454 SMLKDMESRGCNPNFTVYSTLVSYLRNAGKRAKAHEVITHMVEKGQYTHLLSKFKGYRRC 487

[Close]
BLAST of Cp4.1LG14g06120 vs. NCBI nr
Match: gi|567858468|ref|XP_006421917.1| (hypothetical protein CICLE_v10004849mg [Citrus clementina])

HSP 1 Score: 553.5 bits (1425), Expect = 5.2e-154
Identity = 262/358 (73.18%), Postives = 301/358 (84.08%), Query Frame = 1 

Query: 345 ENYRHTASSYHMVMKIFAECEEFKAMWRLLDEMTEKGYPVTARTFMILICTCGDAGLARK 404
           EN+RHTA+SYH++MKIFA+CEEFKAMWRL+DEM E G+P TARTF ILICT         
Sbjct: 156 ENFRHTANSYHLIMKIFADCEEFKAMWRLVDEMIENGFPTTARTFNILICT--------- 215

Query: 405 VVERFIKSKTFNFRPFXCGDAGLARKVVERFIKSKTFNFRPFKHSYNAILHGLLVIKQYK 464
                            CG+ GLARKVVERFIKSK FNFRPFK+SYNAILH LL I+QYK
Sbjct: 216 -----------------CGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK 275

Query: 465 LIEWVYQQMLLDGHSSDILTYNVVLYARCKLGKLDQFHRLLDEMARNGFSPDYHTYNILL 524
           LIEWVYQQM  +G++ DILTYN+V+ A+ +LGKLDQFHRLLDEM R+GFSPD+HTYNILL
Sbjct: 276 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 335

Query: 525 FVLGKGDKPLAALNLLNHMREVGFDPSILHFTTLIDGLSRAGNLDACKYFFDELGNKGCI 584
            VLGKGDKPLAALNLLNHM+EVGFDPS+LHFTTL+DGLSRAGNLDACKYFFDE+ NKGC+
Sbjct: 336 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 395

Query: 585 PDVACYTVMITTYTVAGEHEKAKELFDEMVMKGQLPNVLTYNSMIRGFCMAGKFDEAYSM 644
           PDV CYTVMIT+Y  AGE EKA++LFD M+ KGQLPNV TYNSMIRGFCMAGKFDEA +M
Sbjct: 396 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 455

Query: 645 LAEMETRGCRPNFVVYSTLVSYLRNAGKLSEAHKVITRMVEKGQYAHLVTKFRGYRRC 703
           + EME+RGC PNF+VY+TLVS LRNAGKL+EAH+VI  MVEKG+Y HLV+KF+ Y+RC
Sbjct: 456 MKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKFKRYKRC 487

The following BLAST results are available for this feature:
BLAST of Cp4.1LG14g06120 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PP288_ARATH1.2e-13766.11Pentatricopeptide repeat-containing protein At3g60050 OS=Arabidopsis thaliana GN... [more]
PPR81_ARATH2.4e-13564.99Pentatricopeptide repeat-containing protein At1g55630 OS=Arabidopsis thaliana GN... [more]
PPR18_ARATH2.7e-4925.72Pentatricopeptide repeat-containing protein At1g06710, mitochondrial OS=Arabidop... [more]
PP445_ARATH1.6e-4626.38Pentatricopeptide repeat-containing protein At5g65560 OS=Arabidopsis thaliana GN... [more]
PP444_ARATH2.1e-4624.29Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidop... [more]
BLAST of Cp4.1LG14g06120 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L8P4_CUCSA1.1e-16978.61Uncharacterized protein OS=Cucumis sativus GN=Csa_3G182100 PE=4 SV=1[more]
M5XQE6_PRUPE1.1e-15573.06Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025794mg PE=4 SV=1[more]
V4S4A4_9ROSI3.6e-15473.18Uncharacterized protein OS=Citrus clementina GN=CICLE_v10004849mg PE=4 SV=1[more]
W9S7I4_9ROSA5.3e-15373.39Uncharacterized protein OS=Morus notabilis GN=L484_015785 PE=4 SV=1[more]
M1C1Y3_SOLTU6.4e-15171.51Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400022513 PE=4 SV=1[more]
BLAST of Cp4.1LG14g06120 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G60050.16.6e-13966.11 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G55630.11.4e-13664.99 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G06710.11.5e-5025.72 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT5G65560.19.2e-4826.38 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT5G64320.11.2e-4724.29 Pentatricopeptide repeat (PPR) superfamily protein[more]
BLAST of Cp4.1LG14g06120 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659077478|ref|XP_008439226.1|3.5e-17481.39PREDICTED: pentatricopeptide repeat-containing protein At1g55630-like [Cucumis m... [more]
gi|449446161|ref|XP_004140840.1|1.5e-16978.61PREDICTED: pentatricopeptide repeat-containing protein At1g55630-like [Cucumis s... [more]
gi|596041207|ref|XP_007220061.1|1.6e-15573.06hypothetical protein PRUPE_ppa025794mg [Prunus persica][more]
gi|645257085|ref|XP_008234250.1|4.7e-15573.06PREDICTED: pentatricopeptide repeat-containing protein At3g60050-like [Prunus mu... [more]
gi|567858468|ref|XP_006421917.1|5.2e-15473.18hypothetical protein CICLE_v10004849mg [Citrus clementina][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG14g06120.1Cp4.1LG14g06120.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 328..345
score: 0.48coord: 555..583
score: 7.
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 481..524
score: 2.8E-10coord: 585..633
score: 2.8E-14coord: 254..297
score: 2.8
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 644..687
score: 4.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 291..324
score: 6.7E-4coord: 555..587
score: 1.4E-6coord: 257..289
score: 3.2E-6coord: 658..687
score: 0.002coord: 484..516
score: 3.2E-6coord: 624..656
score: 1.2E-11coord: 589..622
score: 2.3E-6coord: 518..551
score: 6.7E-4coord: 353..385
score: 0.0022coord: 152..184
score: 0.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 184..218
score: 6.423coord: 586..620
score: 11.17coord: 254..288
score: 11.772coord: 516..550
score: 9.712coord: 621..655
score: 14.513coord: 149..183
score: 8.977coord: 350..384
score: 8.977coord: 219..253
score: 6.686coord: 446..480
score: 6.686coord: 481..515
score: 11.772coord: 289..323
score: 9.712coord: 385..419
score: 6.423coord: 551..585
score: 10.019coord: 656..690
score: 9
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 78..100
score: 3.0E-233coord: 124..330
score: 3.0E-233coord: 488..690
score: 3.0E
NoneNo IPR availablePANTHERPTHR24015:SF361SUBFAMILY NOT NAMEDcoord: 488..690
score: 3.0E-233coord: 78..100
score: 3.0E-233coord: 124..330
score: 3.0E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG14g06120CmaCh16G001270Cucurbita maxima (Rimu)cmacpeB344
Cp4.1LG14g06120CmaCh18G012460Cucurbita maxima (Rimu)cmacpeB425
Cp4.1LG14g06120CmoCh18G012690Cucurbita moschata (Rifu)cmocpeB386
Cp4.1LG14g06120CmoCh16G001340Cucurbita moschata (Rifu)cmocpeB307
Cp4.1LG14g06120Cla006179Watermelon (97103) v1cpewmB227
Cp4.1LG14g06120Csa3G182100Cucumber (Chinese Long) v2cpecuB214
Cp4.1LG14g06120CSPI03G16930Wild cucumber (PI 183967)cpecpiB217
Cp4.1LG14g06120Lsi05G012270Bottle gourd (USVL1VR-Ls)cpelsiB172
Cp4.1LG14g06120CsaV3_3G017100Cucumber (Chinese Long) v3cpecucB0257
Cp4.1LG14g06120Bhi01G000962Wax gourdcpewgoB0290
Cp4.1LG14g06120CsGy3G017010Cucumber (Gy14) v2cgybcpeB327
Cp4.1LG14g06120Carg15136Silver-seed gourdcarcpeB1376
Cp4.1LG14g06120Carg22100Silver-seed gourdcarcpeB1039
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG14g06120Cp4.1LG09g00920Cucurbita pepo (Zucchini)cpecpeB023
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG14g06120Cucurbita pepo (Zucchini)cpecpeB232
Cp4.1LG14g06120Cucurbita pepo (Zucchini)cpecpeB242
Cp4.1LG14g06120Cucurbita pepo (Zucchini)cpecpeB245
Cp4.1LG14g06120Cucumber (Gy14) v1cgycpeB0241
Cp4.1LG14g06120Cucurbita maxima (Rimu)cmacpeB608
Cp4.1LG14g06120Cucurbita moschata (Rifu)cmocpeB557
Cp4.1LG14g06120Wild cucumber (PI 183967)cpecpiB229
Cp4.1LG14g06120Cucumber (Chinese Long) v2cpecuB226
Cp4.1LG14g06120Watermelon (Charleston Gray)cpewcgB202
Cp4.1LG14g06120Watermelon (Charleston Gray)cpewcgB207
Cp4.1LG14g06120Melon (DHL92) v3.5.1cpemeB181
Cp4.1LG14g06120Melon (DHL92) v3.5.1cpemeB190
Cp4.1LG14g06120Melon (DHL92) v3.6.1cpemedB225
Cp4.1LG14g06120Melon (DHL92) v3.6.1cpemedB233
Cp4.1LG14g06120Silver-seed gourdcarcpeB0998
Cp4.1LG14g06120Cucumber (Chinese Long) v3cpecucB0252