Cucsa.107790 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.107790
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionPentatricopeptide repeat-containing protein, putative
Locationscaffold00931 : 72422 .. 74320 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGAACGGTGGGAAGTGAAGGCGAGCTGGGTGTGGAGAAACAGAAACGACAATCGACAAGTCTCGAGAGCTGCTTTGTGTTTCAGTTCATGTTACCTTGCCCTAGCAATCAAGTGGCATCTCTTCTCCTCCTCCACTCTCTCTTCCATTCAATCTGAAGAAGGAACTTTCATCTTGTTTTCAAGCGTTCTCTACAAAATCGTAAAACCCCAGATAAGTTTTCATTTCAACTTCAGATTTTCCGATGTTACATAGAAATTCAAAGTGCACATTCCTTCTCAAATGAAAATCTTCTGTTGGGATTCGTAACCTATTGCAAGATTCGGGGTGTTCATGGTAAATGGGTGCCTCCCAATTTGGGGATACAAACGCTTCGGCGATTTCCCACTTGCCTATTTTTGCTCTGTTATTCGATTACTTGTTTTGTATAAGTTTTGTGAGTCTTTAGCGATAATGGGTGTCAATCATGAACTCTTTATCGCTTGTGAGTTCGCGGATAGTCTGCAGATTATTTTCAACTTCTTTTATTGTGCGTCGAACAATTTGGAATCGGAACTTCTGCAGTGACGATCGGTTTCAATTTTTTGTGGAACCCTTTAGTTACTTGGCTGATGGGAACTCAGATTCTTTTGAGACTGATAGTCGTAGATGGGATGATTTTTCATTTAGAAGGAGTTTTCTAAAGGATGCGAAAATTGATGCTGAGAAAGTTATTGAAATTCTTAAACAGGATGGCCCTGGATTTGACACATTTTTGGCTTTAGATGAACTTCAATTAAAGGTCTCAGGGGTGCTTGTTGGAGAAGTTCTGAAGGGGATTTTGAAAAGTAAAAGTGTTCTAAACAAAACTCAGTGTGCAAAATTGGGGTACAAGTTTTTCATATGGAGCGGTAGGATTGAGAATTATAGACACACTGTGAATTCATATCATATAATCATGAAAATATTTGCCGAGTGTGAGGAGTTCAAGGCTATGTGGAGGGTACTAGACGAGATGACTGAGAAAGGGTACCCTGTTACTGCAAGGACATTTATGATATTGATATGTACTTGTGGTGAGGCAGGCTTGGCTAAGAGAGTTGTTGAGAGGTTTATCAAATCAAAAACATTCAATTTCAGGCCGTATAAACATTCTTACAATGCCATTCTTCATGGACTAGTTATTGTAAAACAGTACAAGTTGATTGGATGGGTGTATGATCAAATGCTGCTTGATGATCATAGCCCAGACATTCTTACATATAATGTTTTATTGTTTTCAAGCTGCAAATTGGGGAAATTGGATCAGTTTCACAGATTGCTTGATGAAATGGCCAGGAAAGGGTTTTCCCCTGATTTTCATACTTATAACATTCTTCTTTATGTTCTTGGCAAAGGAGACAAACCCCTTGCAGCTCTAAATCTTTTGAACCACATGAGGGAAGTGGGCTTTGGTCCCAACGTTCTTCACTTCACAACGCTTATAAATGGACTTAGTCGGGCTGGAAATTTGGATGCTTGCAAATATTTTTTtGATGAACTAGGAAACAATGGTTGCATTCCTGATGTTGTTTGCTACACTGTGATGATCACAAGCTTTACAGAGGCTGGGCAGCACGAGAAAGCTAGGGCATTTTTTGATGAGATGATAATGAAGGGCCAGCTTCCTAATGTGTTTACGTACAACTCCATGATTCGTGGTTTTTGTATGGTGGGTAAGTTCAAGGAAGCTTACTCTATGCTCTCTGAAATGGAATCCCGAGGTTGCAGACCAAATTTTCTTGTATATAGTACCCTTGTAAGTTATTTGCGAAATGCAGGCAAGCTTGGCGAGGCTCACAAAGTTATAAAGCAAATGGTTGAGAATGGGCAATATGCCCATTTAATGACAAAATTCAAGGGATATAGGAGATGCTAG

mRNA sequence

ATGTCGAACGGTGGGAAAAGGAGTTTTCTAAAGGATGCGAAAATTGATGCTGAGAAAGTTATTGAAATTCTTAAACAGGATGGCCCTGGATTTGACACATTTTTGGCTTTAGATGAACTTCAATTAAAGGTCTCAGGGGTGCTTGTTGGAGAAGTTCTGAAGGGGATTTTGAAAAGTAAAAGTGTTCTAAACAAAACTCAGTGTGCAAAATTGGGGTACAAGTTTTTCATATGGAGCGGTAGGATTGAGAATTATAGACACACTGTGAATTCATATCATATAATCATGAAAATATTTGCCGAGTGTGAGGAGTTCAAGGCTATGTGGAGGGTACTAGACGAGATGACTGAGAAAGGGTACCCTGTTACTGCAAGGACATTTATGATATTGATATGTACTTGTGGTGAGGCAGGCTTGGCTAAGAGAGTTGTTGAGAGGTTTATCAAATCAAAAACATTCAATTTCAGGCCGTATAAACATTCTTACAATGCCATTCTTCATGGACTAGTTATTGTAAAACAGTACAAGTTGATTGGATGGGTGTATGATCAAATGCTGCTTGATGATCATAGCCCAGACATTCTTACATATAATGTTTTATTGTTTTCAAGCTGCAAATTGGGGAAATTGGATCAGTTTCACAGATTGCTTGATGAAATGGCCAGGAAAGGGTTTTCCCCTGATTTTCATACTTATAACATTCTTCTTTATGTTCTTGGCAAAGGAGACAAACCCCTTGCAGCTCTAAATCTTTTGAACCACATGAGGGAAGTGGGCTTTGGTCCCAACGTTCTTCACTTCACAACGCTTATAAATGGACTTAGTCGGGCTGGAAATTTGGATGCTTGCAAATATTTTTTTGATGAACTAGGAAACAATGGTTGCATTCCTGATGTTGTTTGCTACACTGTGATGATCACAAGCTTTACAGAGGCTGGGCAGCACGAGAAAGCTAGGGCATTTTTTGATGAGATGATAATGAAGGGCCAGCTTCCTAATGTGTTTACGTACAACTCCATGATTCGTGGTTTTTGTATGGTGGGTAAGTTCAAGGAAGCTTACTCTATGCTCTCTGAAATGGAATCCCGAGGTTGCAGACCAAATTTTCTTGTATATAGTACCCTTGTAAGTTATTTGCGAAATGCAGGCAAGCTTGGCGAGGCTCACAAAGTTATAAAGCAAATGGTTGAGAATGGGCAATATGCCCATTTAATGACAAAATTCAAGGGATATAGGAGATGCTAG

Coding sequence (CDS)

ATGTCGAACGGTGGGAAAAGGAGTTTTCTAAAGGATGCGAAAATTGATGCTGAGAAAGTTATTGAAATTCTTAAACAGGATGGCCCTGGATTTGACACATTTTTGGCTTTAGATGAACTTCAATTAAAGGTCTCAGGGGTGCTTGTTGGAGAAGTTCTGAAGGGGATTTTGAAAAGTAAAAGTGTTCTAAACAAAACTCAGTGTGCAAAATTGGGGTACAAGTTTTTCATATGGAGCGGTAGGATTGAGAATTATAGACACACTGTGAATTCATATCATATAATCATGAAAATATTTGCCGAGTGTGAGGAGTTCAAGGCTATGTGGAGGGTACTAGACGAGATGACTGAGAAAGGGTACCCTGTTACTGCAAGGACATTTATGATATTGATATGTACTTGTGGTGAGGCAGGCTTGGCTAAGAGAGTTGTTGAGAGGTTTATCAAATCAAAAACATTCAATTTCAGGCCGTATAAACATTCTTACAATGCCATTCTTCATGGACTAGTTATTGTAAAACAGTACAAGTTGATTGGATGGGTGTATGATCAAATGCTGCTTGATGATCATAGCCCAGACATTCTTACATATAATGTTTTATTGTTTTCAAGCTGCAAATTGGGGAAATTGGATCAGTTTCACAGATTGCTTGATGAAATGGCCAGGAAAGGGTTTTCCCCTGATTTTCATACTTATAACATTCTTCTTTATGTTCTTGGCAAAGGAGACAAACCCCTTGCAGCTCTAAATCTTTTGAACCACATGAGGGAAGTGGGCTTTGGTCCCAACGTTCTTCACTTCACAACGCTTATAAATGGACTTAGTCGGGCTGGAAATTTGGATGCTTGCAAATATTTTTTtGATGAACTAGGAAACAATGGTTGCATTCCTGATGTTGTTTGCTACACTGTGATGATCACAAGCTTTACAGAGGCTGGGCAGCACGAGAAAGCTAGGGCATTTTTTGATGAGATGATAATGAAGGGCCAGCTTCCTAATGTGTTTACGTACAACTCCATGATTCGTGGTTTTTGTATGGTGGGTAAGTTCAAGGAAGCTTACTCTATGCTCTCTGAAATGGAATCCCGAGGTTGCAGACCAAATTTTCTTGTATATAGTACCCTTGTAAGTTATTTGCGAAATGCAGGCAAGCTTGGCGAGGCTCACAAAGTTATAAAGCAAATGGTTGAGAATGGGCAATATGCCCATTTAATGACAAAATTCAAGGGATATAGGAGATGCTAG

Protein sequence

MSNGGKRSFLKDAKIDAEKVIEILKQDGPGFDTFLALDELQLKVSGVLVGEVLKGILKSKSVLNKTQCAKLGYKFFIWSGRIENYRHTVNSYHIIMKIFAECEEFKAMWRVLDEMTEKGYPVTARTFMILICTCGEAGLAKRVVERFIKSKTFNFRPYKHSYNAILHGLVIVKQYKLIGWVYDQMLLDDHSPDILTYNVLLFSSCKLGKLDQFHRLLDEMARKGFSPDFHTYNILLYVLGKGDKPLAALNLLNHMREVGFGPNVLHFTTLINGLSRAGNLDACKYFFDELGNNGCIPDVVCYTVMITSFTEAGQHEKARAFFDEMIMKGQLPNVFTYNSMIRGFCMVGKFKEAYSMLSEMESRGCRPNFLVYSTLVSYLRNAGKLGEAHKVIKQMVENGQYAHLMTKFKGYRRC*
Homology
[Close]
BLAST of Cucsa.107790 vs. Swiss-Prot
Match: PPR81_ARATH (Pentatricopeptide repeat-containing protein At1g55630 OS=Arabidopsis thaliana GN=At1g55630 PE=2 SV=1)

HSP 1 Score: 569.3 bits (1466), Expect = 3.4e-161
Identity = 271/408 (66.42%), Postives = 330/408 (80.88%), Query Frame = 1 

Query: 6   KRSFLKDAKIDAEKVIEILKQDGPGFDTFLALDELQLKVSGVLVGEVLKGILKSKSVLNK 65
           ++ F++  K+ A +V++ L+QD PGF+T  ALDEL + +SG+LV EVL GIL++ S  NK
Sbjct: 69  RKRFMESTKLSASRVLDTLQQDCPGFNTKSALDELNVSISGLLVREVLVGILRTLSFDNK 128

Query: 66  TQCAKLGYKFFIWSGRIENYRHTVNSYHIIMKIFAECEEFKAMWRVLDEMTEKGYPVTAR 125
           T+CAKL YKFF+W G  EN+RHT N YH++MKIFAEC E+KAM R++DEM + GYP TA 
Sbjct: 129 TRCAKLAYKFFVWCGGQENFRHTANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTAC 188

Query: 126 TFMILICTCGEAGLAKRVVERFIKSKTFNFRPYKHSYNAILHGLVIVKQYKLIGWVYDQM 185
           TF +LICTCGEAGLA+ VVE+FIKSKTFN+RPYKHSYNAILH L+ VKQYKLI WVY+QM
Sbjct: 189 TFNLLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQM 248

Query: 186 LLDDHSPDILTYNVLLFSSCKLGKLDQFHRLLDEMARKGFSPDFHTYNILLYVLGKGDKP 245
           L D  +PD+LTYN+++F++ +LGK D+ +RLLDEM + GFSPD +TYNILL+ L  G+KP
Sbjct: 249 LEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKP 308

Query: 246 LAALNLLNHMREVGFGPNVLHFTTLINGLSRAGNLDACKYFFDELGNNGCIPDVVCYTVM 305
           LAALNLLNHMREVG  P V+HFTTLI+GLSRAG L+ACKYF DE    GC PDVVCYTVM
Sbjct: 309 LAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVM 368

Query: 306 ITSFTEAGQHEKARAFFDEMIMKGQLPNVFTYNSMIRGFCMVGKFKEAYSMLSEMESRGC 365
           IT +   G+ EKA   F EM  KGQLPNVFTYNSMIRGFCM GKFKEA ++L EMESRGC
Sbjct: 369 ITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGC 428

Query: 366 RPNFLVYSTLVSYLRNAGKLGEAHKVIKQMVENGQYAHLMTKFKGYRR 414
            PNF+VYSTLV+ L+NAGK+ EAH+V+K MVE G Y HL++K K YRR
Sbjct: 429 NPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKGHYVHLISKLKKYRR 476

[Close]
BLAST of Cucsa.107790 vs. Swiss-Prot
Match: PP288_ARATH (Pentatricopeptide repeat-containing protein At3g60050 OS=Arabidopsis thaliana GN=At3g60050 PE=2 SV=1)

HSP 1 Score: 556.6 bits (1433), Expect = 2.3e-157
Identity = 266/405 (65.68%), Postives = 329/405 (81.23%), Query Frame = 1 

Query: 9   FLKDAKIDAEKVIEILKQDGPGFDTFLALDELQLKVSGVLVGEVLKGILKSKSVLNKTQC 68
           FL+ A   A +V+  L+ D  GF++   LDEL ++VSG+LV EVL GIL++ S  NK +C
Sbjct: 69  FLESANHSASRVLVTLQLDESGFNSKSVLDELNVRVSGLLVREVLVGILRNLSYDNKARC 128

Query: 69  AKLGYKFFIWSGRIENYRHTVNSYHIIMKIFAECEEFKAMWRVLDEMTEKGYPVTARTFM 128
           AKL Y+FF+WSG  E +RHTVNSYH++MKIFAEC E+KAMWR++DEM + G+P TARTF 
Sbjct: 129 AKLAYRFFLWSGEQECFRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFN 188

Query: 129 ILICTCGEAGLAKRVVERFIKSKTFNFRPYKHSYNAILHGLVIVKQYKLIGWVYDQMLLD 188
           +LIC+CGEAGLAK+ V +F+KSKTFN+RP+KHSYNAIL+ L+ VKQYKLI WVY QML D
Sbjct: 189 LLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLED 248

Query: 189 DHSPDILTYNVLLFSSCKLGKLDQFHRLLDEMARKGFSPDFHTYNILLYVLGKGDKPLAA 248
             SPD+LTYN+LL+++ +LGK+D+F RL DEMAR GFSPD +TYNILL++LGKG+KPLAA
Sbjct: 249 GFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAA 308

Query: 249 LNLLNHMREVGFGPNVLHFTTLINGLSRAGNLDACKYFFDELGNNGCIPDVVCYTVMITS 308
           L  LNHM+EVG  P+VLH+TTLI+GLSRAGNL+ACKYF DE+   GC PDVVCYTVMIT 
Sbjct: 309 LTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITG 368

Query: 309 FTEAGQHEKARAFFDEMIMKGQLPNVFTYNSMIRGFCMVGKFKEAYSMLSEMESRGCRPN 368
           +  +G+ +KA+  F EM +KGQLPNVFTYNSMIRG CM G+F+EA  +L EMESRGC PN
Sbjct: 369 YVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPN 428

Query: 369 FLVYSTLVSYLRNAGKLGEAHKVIKQMVENGQYAHLMTKFKGYRR 414
           F+VYSTLVSYLR AGKL EA KVI++MV+ G Y HL+ K   YRR
Sbjct: 429 FVVYSTLVSYLRKAGKLSEARKVIREMVKKGHYVHLVPKMMKYRR 473

[Close]
BLAST of Cucsa.107790 vs. Swiss-Prot
Match: PP447_ARATH (Putative pentatricopeptide repeat-containing protein At5g65820 OS=Arabidopsis thaliana GN=At5g65820 PE=3 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 1.1e-37
Identity = 107/396 (27.02%), Postives = 189/396 (47.73%), Query Frame = 1 

Query: 6   KRSFLKDAKIDAEKVIEILKQDGPGFDTFLALDELQLKVSGVLVGEVLKGILKSKSVLNK 65
           K S   +   D EK   IL++    F + +   EL L  SGV   E+  G+++   VLN+
Sbjct: 72  KNSKYDEFASDVEKSYRILRK----FHSRVPKLELALNESGV---ELRPGLIER--VLNR 131

Query: 66  T-QCAKLGYKFFIWSGRIENYRHTVNSYHIIMKIFAECEEFKAMWRVLDEM-TEKGYPVT 125
                 LGY+FF+W+ +   Y H++  Y  ++KI ++  +F A+W +++EM  E    + 
Sbjct: 132 CGDAGNLGYRFFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIE 191

Query: 126 ARTFMILICTCGEAGLAKRVVERFIKSKTFNFRPYKHSYNAILHGLVIVKQYKLIGWVYD 185
              F++L+     A + K+ +E   +   F F P ++ +  +L  L      K    +++
Sbjct: 192 PELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFE 251

Query: 186 QMLLDDHSPDILTYNVLLFSSCKLGKLDQFHRLLDEMARKGFSPDFHTYNILLYVLGKGD 245
            M +     ++  +  LL+  C++GK+ +   +L +M   GF PD   Y  LL       
Sbjct: 252 DMRM-RFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAG 311

Query: 246 KPLAALNLLNHMREVGFGPNVLHFTTLINGLSRAGNLDACKYFFDELGNNGCIPDVVCYT 305
           K   A +LL  MR  GF PN   +T LI  L +   ++     F E+    C  DVV YT
Sbjct: 312 KMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYT 371

Query: 306 VMITSFTEAGQHEKARAFFDEMIMKGQLPNVFTYNSMIRGFCMVGKFKEAYSMLSEMESR 365
            +++ F + G+ +K     D+MI KG +P+  TY  ++        F+E   ++ +M   
Sbjct: 372 ALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQI 431

Query: 366 GCRPNFLVYSTLVSYLRNAGKLGEAHKVIKQMVENG 400
              P+  +Y+ ++      G++ EA ++  +M ENG
Sbjct: 432 EYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENG 457


HSP 2 Score: 119.0 bits (297), Expect = 1.2e-25
Identity = 80/309 (25.89%), Postives = 142/309 (45.95%), Query Frame = 1 

Query: 94  IIMKIFAECEEFKAMWRVLDEMTEKGYPVTARTFMILICTCGEAGLAKRVVERFIKSKTF 153
           ++++ FA  +  K    VLDEM + G+      F  L+    + G  K   + F +    
Sbjct: 188 VLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLF-EDMRM 247

Query: 154 NFRPYKHSYNAILHGLVIVKQYKLIGWVYDQMLLDDHSPDILTYNVLLFSSCKLGKLDQF 213
            F      + ++L+G   V +     +V  QM      PDI+ Y  LL      GK+   
Sbjct: 248 RFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADA 307

Query: 214 HRLLDEMARKGFSPDFHTYNILLYVLGKGDKPLAALNLLNHMREVGFGPNVLHFTTLING 273
           + LL +M R+GF P+ + Y +L+  L K D+   A+ +   M       +V+ +T L++G
Sbjct: 308 YDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSG 367

Query: 274 LSRAGNLDACKYFFDELGNNGCIPDVVCYTVMITSFTEAGQHEKARAFFDEMIMKGQLPN 333
             + G +D C    D++   G +P  + Y  ++ +  +    E+     ++M      P+
Sbjct: 368 FCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPD 427

Query: 334 VFTYNSMIRGFCMVGKFKEAYSMLSEMESRGCRPNFLVYSTLVSYLRNAGKLGEAHKVIK 393
           +  YN +IR  C +G+ KEA  + +EME  G  P    +  +++ L + G L EA    K
Sbjct: 428 IGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFK 487

Query: 394 QMVENGQYA 403
           +MV  G ++
Sbjct: 488 EMVTRGLFS 495


HSP 3 Score: 89.4 bits (220), Expect = 1.0e-16
Identity = 74/317 (23.34%), Postives = 134/317 (42.27%), Query Frame = 1 

Query: 86  RHTVNSYHIIMKIFAECEEFKAMWR--VLDEMTEKGYPVTARTFMILICTCGEAGLAKRV 145
           R  VN  +    ++  C   K M    VL +M E G+      +  L+     AG     
Sbjct: 247 RFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADA 306

Query: 146 VERFIKSKTFNFRPYKHSYNAILHGLVIVKQYKLIGWVYDQMLLDDHSPDILTYNVLLFS 205
            +     +   F P  + Y  ++  L  V + +    V+ +M   +   D++TY  L+  
Sbjct: 307 YDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSG 366

Query: 206 SCKLGKLDQFHRLLDEMARKGFSPDFHTYNILLYVLGKGDKPLAALNLLNHMREVGFGPN 265
            CK GK+D+ + +LD+M +KG  P   TY  ++    K +     L L+  MR++ + P+
Sbjct: 367 FCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPD 426

Query: 266 VLHFTTLINGLSRAGNLDACKYFFDELGNNGCIPDVVCYTVMITSFTEAGQHEKARAFFD 325
           +  +  +I    + G +      ++E+  NG  P V  + +MI      G   +A   F 
Sbjct: 427 IGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFK 486

Query: 326 EMIMKG--QLPNVFTYNSMIRGFCMVGKFKEAYSMLSEMESRG-CRPNFLVYSTLVSYLR 385
           EM+ +G   +    T   ++       K + A  + S + S+G C  N L ++  +  L 
Sbjct: 487 EMVTRGLFSVSQYGTLKLLLNTVLKDKKLEMAKDVWSCITSKGACELNVLSWTIWIHALF 546

Query: 386 NAGKLGEAHKVIKQMVE 398
           + G   EA     +M+E
Sbjct: 547 SKGYEKEACSYCIEMIE 563

[Close]
BLAST of Cucsa.107790 vs. Swiss-Prot
Match: PP298_ARATH (Pentatricopeptide repeat-containing protein At4g01400, mitochondrial OS=Arabidopsis thaliana GN=At4g01400 PE=2 SV=2)

HSP 1 Score: 155.6 bits (392), Expect = 1.2e-36
Identity = 103/334 (30.84%), Postives = 160/334 (47.90%), Query Frame = 1 

Query: 71  LGYKFFIWSGRIENYRHTVNSYHIIMKIFAECEEFKAMWRVLDEMTEKGYPVTARTFMIL 130
           L  + F ++ +  N+RH+ +S+ I++        F  +  VL +    GYP+T   F  L
Sbjct: 66  LAKEIFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYPLTGEIFTYL 125

Query: 131 ICTCGEAGLAKRVVERFIKSKTFNFRPYKHSYNAILHGLVIVKQYKLIGW-VYDQMLLDD 190
           I    EA L ++V+  F K   FNF P     N IL  LV  + Y    + ++    L  
Sbjct: 126 IKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHG 185

Query: 191 HSPDILTYNVLLFSSCKLGKLDQFHRLLDEMARKGFSPDFHTYNILLYVLGKGDKPLAAL 250
             P+  +YN+L+ + C    L   ++L  +M  +   PD  +Y IL+    +  +   A+
Sbjct: 186 VMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAM 245

Query: 251 NLLNHMREVGFGPNVLHFTTLINGLSRAGNLDACKYFFDELGNNGCIPDVVCYTVMITSF 310
            LL+ M   GF P+ L +TTL+N L R   L         +   GC PD+V Y  MI  F
Sbjct: 246 ELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGF 305

Query: 311 TEAGQHEKARAFFDEMIMKGQLPNVFTYNSMIRGFCMVGKFKEAYSMLSEMESRGCRPNF 370
               +   AR   D+M+  G  PN  +Y ++I G C  G F E    L EM S+G  P+F
Sbjct: 306 CREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHF 365

Query: 371 LVYSTLVSYLRNAGKLGEAHKVIKQMVENGQYAH 404
            V + LV    + GK+ EA  V++ +++NG+  H
Sbjct: 366 SVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLH 399

[Close]
BLAST of Cucsa.107790 vs. Swiss-Prot
Match: PP275_ARATH (Pentatricopeptide repeat-containing protein At3g49730 OS=Arabidopsis thaliana GN=At3g49730 PE=2 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 4.5e-36
Identity = 91/331 (27.49%), Postives = 163/331 (49.24%), Query Frame = 1 

Query: 71  LGYKFFIWSGRIENYRHTVNSYHIIMKIFAECEEFKAMWRVLDEMTEKGYP-VTARTFMI 130
           LGY+FF+W+ +   Y H+      ++ I ++  +F A+W +++EM +     +    F++
Sbjct: 113 LGYRFFLWATKQPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFVV 172

Query: 131 LICTCGEAGLAKRVVERFIKSKTFNFRPYKHSYNAILHGLVIVKQYKLIGWVYDQMLLDD 190
           L+     A + K+ VE   +   +   P ++ +  +L  L      K    V++ M  + 
Sbjct: 173 LMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMR-EK 232

Query: 191 HSPDILTYNVLLFSSCKLGKLDQFHRLLDEMARKGFSPDFHTYNILLYVLGKGDKPLAAL 250
             P++  +  LL+  C+ GKL +   +L +M   G  PD   +  LL       K   A 
Sbjct: 233 FPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAY 292

Query: 251 NLLNHMREVGFGPNVLHFTTLINGLSRAGN-LDACKYFFDELGNNGCIPDVVCYTVMITS 310
           +L+N MR+ GF PNV  +T LI  L R    +D     F E+   GC  D+V YT +I+ 
Sbjct: 293 DLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISG 352

Query: 311 FTEAGQHEKARAFFDEMIMKGQLPNVFTYNSMIRGFCMVGKFKEAYSMLSEMESRGCRPN 370
           F + G  +K  +  D+M  KG +P+  TY  ++       +F+E   ++ +M+ RGC P+
Sbjct: 353 FCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPD 412

Query: 371 FLVYSTLVSYLRNAGKLGEAHKVIKQMVENG 400
            L+Y+ ++      G++ EA ++  +M  NG
Sbjct: 413 LLIYNVVIRLACKLGEVKEAVRLWNEMEANG 442


HSP 2 Score: 65.9 bits (159), Expect = 1.2e-09
Identity = 61/268 (22.76%), Postives = 114/268 (42.54%), Query Frame = 1 

Query: 81  RIENYRHTVNSYHIIMKIFAECEE-FKAMWRVLDEMTEKGYPVTARTFMILICTCGEAGL 140
           R   +   VN Y ++++     E+      RV  EM   G      T+  LI    + G+
Sbjct: 298 RKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGM 357

Query: 141 AKRVVERFIKSKTFNFRPYKHSYNAILHGLVIVKQYKLIGWVYDQMLLDDHSPDILTYNV 200
             +        +     P + +Y  I+      +Q++    + ++M      PD+L YNV
Sbjct: 358 IDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNV 417

Query: 201 LLFSSCKLGKLDQFHRLLDEMARKGFSPDFHTYNILLYVLGKGDKPLAALNLLNHM--RE 260
           ++  +CKLG++ +  RL +EM   G SP   T+ I++         + A N    M  R 
Sbjct: 418 VIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRG 477

Query: 261 VGFGPNVLHFTTLINGLSRAGNLDACKYFFDELGN--NGCIPDVVCYTVMITSFTEAGQH 320
           +   P      +L+N L R   L+  K  +  + N  + C  +V  +T+ I +    G  
Sbjct: 478 IFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSSCELNVSAWTIWIHALYAKGHV 537

Query: 321 EKARAFFDEMIMKGQLPNVFTYNSMIRG 344
           ++A ++  +M+    +P   TY  +++G
Sbjct: 538 KEACSYCLDMMEMDLMPQPNTYAKLMKG 565

[Close]
BLAST of Cucsa.107790 vs. TrEMBL
Match: A0A0A0L8P4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G182100 PE=4 SV=1)

HSP 1 Score: 835.1 bits (2156), Expect = 3.7e-239
Identity = 408/409 (99.76%), Postives = 409/409 (100.00%), Query Frame = 1 

Query: 6   KRSFLKDAKIDAEKVIEILKQDGPGFDTFLALDELQLKVSGVLVGEVLKGILKSKSVLNK 65
           +RSFLKDAKIDAEKVIEILKQDGPGFDTFLALDELQLKVSGVLVGEVLKGILKSKSVLNK
Sbjct: 68  RRSFLKDAKIDAEKVIEILKQDGPGFDTFLALDELQLKVSGVLVGEVLKGILKSKSVLNK 127

Query: 66  TQCAKLGYKFFIWSGRIENYRHTVNSYHIIMKIFAECEEFKAMWRVLDEMTEKGYPVTAR 125
           TQCAKLGYKFFIWSGRIENYRHTVNSYHIIMKIFAECEEFKAMWRVLDEMTEKGYPVTAR
Sbjct: 128 TQCAKLGYKFFIWSGRIENYRHTVNSYHIIMKIFAECEEFKAMWRVLDEMTEKGYPVTAR 187

Query: 126 TFMILICTCGEAGLAKRVVERFIKSKTFNFRPYKHSYNAILHGLVIVKQYKLIGWVYDQM 185
           TFMILICTCGEAGLAKRVVERFIKSKTFNFRPYKHSYNAILHGLVIVKQYKLIGWVYDQM
Sbjct: 188 TFMILICTCGEAGLAKRVVERFIKSKTFNFRPYKHSYNAILHGLVIVKQYKLIGWVYDQM 247

Query: 186 LLDDHSPDILTYNVLLFSSCKLGKLDQFHRLLDEMARKGFSPDFHTYNILLYVLGKGDKP 245
           LLDDHSPDILTYNVLLFSSCKLGKLDQFHRLLDEMARKGFSPDFHTYNILLYVLGKGDKP
Sbjct: 248 LLDDHSPDILTYNVLLFSSCKLGKLDQFHRLLDEMARKGFSPDFHTYNILLYVLGKGDKP 307

Query: 246 LAALNLLNHMREVGFGPNVLHFTTLINGLSRAGNLDACKYFFDELGNNGCIPDVVCYTVM 305
           LAALNLLNHMREVGFGPNVLHFTTLINGLSRAGNLDACKYFFDELGNNGCIPDVVCYTVM
Sbjct: 308 LAALNLLNHMREVGFGPNVLHFTTLINGLSRAGNLDACKYFFDELGNNGCIPDVVCYTVM 367

Query: 306 ITSFTEAGQHEKARAFFDEMIMKGQLPNVFTYNSMIRGFCMVGKFKEAYSMLSEMESRGC 365
           ITSFTEAGQHEKARAFFDEMIMKGQLPNVFTYNSMIRGFCMVGKFKEAYSMLSEMESRGC
Sbjct: 368 ITSFTEAGQHEKARAFFDEMIMKGQLPNVFTYNSMIRGFCMVGKFKEAYSMLSEMESRGC 427

Query: 366 RPNFLVYSTLVSYLRNAGKLGEAHKVIKQMVENGQYAHLMTKFKGYRRC 415
           RPNFLVYSTLVSYLRNAGKLGEAHKVIKQMVENGQYAHLMTKFKGYRRC
Sbjct: 428 RPNFLVYSTLVSYLRNAGKLGEAHKVIKQMVENGQYAHLMTKFKGYRRC 476

[Close]
BLAST of Cucsa.107790 vs. TrEMBL
Match: M5XQE6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025794mg PE=4 SV=1)

HSP 1 Score: 641.0 bits (1652), Expect = 1.0e-180
Identity = 301/409 (73.59%), Postives = 353/409 (86.31%), Query Frame = 1 

Query: 6   KRSFLKDAKIDAEKVIEILKQDGPGFDTFLALDELQLKVSGVLVGEVLKGILKSKSVLNK 65
           +RSF ++AKI   +V+E+L+QDGPGFDT  ALDEL ++VSG+LV EVL  ILK  +  +K
Sbjct: 38  RRSFFENAKIHTRRVLEVLQQDGPGFDTKAALDELHIEVSGLLVREVLFKILKQVNYASK 97

Query: 66  TQCAKLGYKFFIWSGRIENYRHTVNSYHIIMKIFAECEEFKAMWRVLDEMTEKGYPVTAR 125
            +CAKLGYKFF+WSG++ENYRHT N+YH++MKIFA+CEEFKAMWR++DEM EKGYP TA+
Sbjct: 98  MRCAKLGYKFFVWSGQLENYRHTANTYHLMMKIFADCEEFKAMWRLVDEMIEKGYPTTAQ 157

Query: 126 TFMILICTCGEAGLAKRVVERFIKSKTFNFRPYKHSYNAILHGLVIVKQYKLIGWVYDQM 185
           TF ILICTCGEAGLAK+VVERFIKSKTFN+RP+KHSYNAILH LV+VKQYKLI WVY QM
Sbjct: 158 TFNILICTCGEAGLAKKVVERFIKSKTFNYRPFKHSYNAILHSLVVVKQYKLIEWVYQQM 217

Query: 186 LLDDHSPDILTYNVLLFSSCKLGKLDQFHRLLDEMARKGFSPDFHTYNILLYVLGKGDKP 245
           L D H  DILTYNV++++  +LGKLDQFHRLL+EM R GF+PD HTYNILL+VLGKGDKP
Sbjct: 218 LADGHCTDILTYNVMMYAKYRLGKLDQFHRLLEEMGRSGFAPDLHTYNILLHVLGKGDKP 277

Query: 246 LAALNLLNHMREVGFGPNVLHFTTLINGLSRAGNLDACKYFFDELGNNGCIPDVVCYTVM 305
           LAALNLLNHM+EVG  P+VLHFTTLI+GLSR+GNLDACKYFFDE+  + C PDVVCYTVM
Sbjct: 278 LAALNLLNHMKEVGLDPSVLHFTTLIDGLSRSGNLDACKYFFDEMIKHECFPDVVCYTVM 337

Query: 306 ITSFTEAGQHEKARAFFDEMIMKGQLPNVFTYNSMIRGFCMVGKFKEAYSMLSEMESRGC 365
           I+ +  AG+ EKA+  FDEMI  GQLPNVFTYN+MIRG CM GKF+EA SML +MESRGC
Sbjct: 338 ISGYIVAGELEKAQGVFDEMIPNGQLPNVFTYNAMIRGLCMAGKFEEACSMLKDMESRGC 397

Query: 366 RPNFLVYSTLVSYLRNAGKLGEAHKVIKQMVENGQYAHLMTKFKGYRRC 415
            PNF VYSTLVSYLRNAGKL +AH+VI  MVE GQY HL++KFKGYRRC
Sbjct: 398 NPNFTVYSTLVSYLRNAGKLAKAHEVITHMVEKGQYTHLLSKFKGYRRC 446

[Close]
BLAST of Cucsa.107790 vs. TrEMBL
Match: W9S7I4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_015785 PE=4 SV=1)

HSP 1 Score: 639.8 bits (1649), Expect = 2.3e-180
Identity = 302/409 (73.84%), Postives = 352/409 (86.06%), Query Frame = 1 

Query: 6   KRSFLKDAKIDAEKVIEILKQDGPGFDTFLALDELQLKVSGVLVGEVLKGILKSKSVLNK 65
           ++SF + A+IDA +V+E+L+QDGPGFD   ALDEL ++VSG+LV +VL GIL + S  NK
Sbjct: 90  RQSFFETARIDAGRVLEVLQQDGPGFDAKPALDELNIRVSGLLVRKVLLGILSNISHTNK 149

Query: 66  TQCAKLGYKFFIWSGRIENYRHTVNSYHIIMKIFAECEEFKAMWRVLDEMTEKGYPVTAR 125
            +CAKLG+KFF WSG+  NYRHT NSYH+++KIFAECEEFKAMWR++DEM E+G+P TAR
Sbjct: 150 IRCAKLGFKFFTWSGQQGNYRHTANSYHLLIKIFAECEEFKAMWRLVDEMIERGFPTTAR 209

Query: 126 TFMILICTCGEAGLAKRVVERFIKSKTFNFRPYKHSYNAILHGLVIVKQYKLIGWVYDQM 185
           T  ILICTCGEAGLA++VVERFIKSKTFNFRP+KHSYNAILH L++  QYKLI WVY QM
Sbjct: 210 TLNILICTCGEAGLARKVVERFIKSKTFNFRPFKHSYNAILHCLLVTNQYKLIEWVYQQM 269

Query: 186 LLDDHSPDILTYNVLLFSSCKLGKLDQFHRLLDEMARKGFSPDFHTYNILLYVLGKGDKP 245
           L D  SPDILTYNVL+ +  +LGKLDQFHRLLDEM R+GFSPD HTYNILL+VLGKGDKP
Sbjct: 270 LADGFSPDILTYNVLMLTKYRLGKLDQFHRLLDEMGRRGFSPDLHTYNILLHVLGKGDKP 329

Query: 246 LAALNLLNHMREVGFGPNVLHFTTLINGLSRAGNLDACKYFFDELGNNGCIPDVVCYTVM 305
           LAALNLLNHM+E G  P VLHFTTLI+GLSRAGNLDAC++FFDE+  NGCIPDVVCYTVM
Sbjct: 330 LAALNLLNHMKETGIDPGVLHFTTLIDGLSRAGNLDACRFFFDEMPKNGCIPDVVCYTVM 389

Query: 306 ITSFTEAGQHEKARAFFDEMIMKGQLPNVFTYNSMIRGFCMVGKFKEAYSMLSEMESRGC 365
           IT +  AG+ EKA++ FDEMI KGQ+PNVFTYNSMIRG CM GKF+EA SML +MESRGC
Sbjct: 390 ITGYVVAGELEKAQSIFDEMITKGQIPNVFTYNSMIRGLCMAGKFEEACSMLKDMESRGC 449

Query: 366 RPNFLVYSTLVSYLRNAGKLGEAHKVIKQMVENGQYAHLMTKFKGYRRC 415
            PNFLVY+TLVS LRNAGKL EAH+V+K MVE GQY HL++KFKGYRRC
Sbjct: 450 NPNFLVYTTLVSNLRNAGKLSEAHQVVKHMVEKGQYVHLLSKFKGYRRC 498

[Close]
BLAST of Cucsa.107790 vs. TrEMBL
Match: V4S4A4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10004849mg PE=4 SV=1)

HSP 1 Score: 628.6 bits (1620), Expect = 5.3e-177
Identity = 296/409 (72.37%), Postives = 350/409 (85.57%), Query Frame = 1 

Query: 6   KRSFLKDAKIDAEKVIEILKQDGPGFDTFLALDELQLKVSGVLVGEVLKGILKSKSVLNK 65
           +R FL + K DA +V+EIL+ DGPGFD  L L E  ++VS +LV EVL GIL+S +  +K
Sbjct: 79  RRMFLDNVKFDASRVLEILQNDGPGFDAKLVLSESGIRVSEILVREVLSGILRSVNYADK 138

Query: 66  TQCAKLGYKFFIWSGRIENYRHTVNSYHIIMKIFAECEEFKAMWRVLDEMTEKGYPVTAR 125
           T+CAKLGYKFF+WSG+ EN+RHT NSYH+IMKIFA+CEEFKAMWR++DEM E G+P TAR
Sbjct: 139 TKCAKLGYKFFVWSGQQENFRHTANSYHLIMKIFADCEEFKAMWRLVDEMIENGFPTTAR 198

Query: 126 TFMILICTCGEAGLAKRVVERFIKSKTFNFRPYKHSYNAILHGLVIVKQYKLIGWVYDQM 185
           TF ILICTCGE GLA++VVERFIKSK FNFRP+K+SYNAILH L+ ++QYKLI WVY QM
Sbjct: 199 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 258

Query: 186 LLDDHSPDILTYNVLLFSSCKLGKLDQFHRLLDEMARKGFSPDFHTYNILLYVLGKGDKP 245
             + ++PDILTYN+++ +  +LGKLDQFHRLLDEM R GFSPDFHTYNILL+VLGKGDKP
Sbjct: 259 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 318

Query: 246 LAALNLLNHMREVGFGPNVLHFTTLINGLSRAGNLDACKYFFDELGNNGCIPDVVCYTVM 305
           LAALNLLNHM+EVGF P+VLHFTTL++GLSRAGNLDACKYFFDE+ N GC+PDVVCYTVM
Sbjct: 319 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 378

Query: 306 ITSFTEAGQHEKARAFFDEMIMKGQLPNVFTYNSMIRGFCMVGKFKEAYSMLSEMESRGC 365
           ITS+  AG+ EKA+  FD MI KGQLPNVFTYNSMIRGFCM GKF EA +M+ EMESRGC
Sbjct: 379 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 438

Query: 366 RPNFLVYSTLVSYLRNAGKLGEAHKVIKQMVENGQYAHLMTKFKGYRRC 415
            PNFLVY+TLVS LRNAGKL EAH+VI+ MVE G+Y HL++KFK Y+RC
Sbjct: 439 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKFKRYKRC 487

[Close]
BLAST of Cucsa.107790 vs. TrEMBL
Match: A0A061G067_THECC (Pentatricopeptide repeat (PPR) superfamily protein OS=Theobroma cacao GN=TCM_015166 PE=4 SV=1)

HSP 1 Score: 628.2 bits (1619), Expect = 6.9e-177
Identity = 295/409 (72.13%), Postives = 347/409 (84.84%), Query Frame = 1 

Query: 6   KRSFLKDAKIDAEKVIEILKQDGPGFDTFLALDELQLKVSGVLVGEVLKGILKSKSVLNK 65
           +  F K  + DA +++E+L+QDGPGFD   AL E+Q++VSG LV EVL GILK+ +  NK
Sbjct: 80  RHGFFKSGRDDARRILEVLQQDGPGFDAKAALSEMQMRVSGFLVREVLVGILKNINYANK 139

Query: 66  TQCAKLGYKFFIWSGRIENYRHTVNSYHIIMKIFAECEEFKAMWRVLDEMTEKGYPVTAR 125
           T+CAKLGYKFF+WSG+ E YRHT NSYH+IMKIFAECEE+KAMWR++DEM E GYP TAR
Sbjct: 140 TRCAKLGYKFFVWSGQQETYRHTTNSYHLIMKIFAECEEYKAMWRLVDEMIENGYPTTAR 199

Query: 126 TFMILICTCGEAGLAKRVVERFIKSKTFNFRPYKHSYNAILHGLVIVKQYKLIGWVYDQM 185
           TF ILICTCGEAGLA++VVERFIKSKTFN+RP+KHSYNAILH L++V QYKLI WVY QM
Sbjct: 200 TFNILICTCGEAGLARKVVERFIKSKTFNYRPFKHSYNAILHTLLVVNQYKLIEWVYQQM 259

Query: 186 LLDDHSPDILTYNVLLFSSCKLGKLDQFHRLLDEMARKGFSPDFHTYNILLYVLGKGDKP 245
           L +  +PD LTYN+L+ +  +LGKLDQFHRLLDEM R GFSPDFHTYNILL+VLGKGDKP
Sbjct: 260 LAEGLAPDTLTYNILMCAEYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 319

Query: 246 LAALNLLNHMREVGFGPNVLHFTTLINGLSRAGNLDACKYFFDELGNNGCIPDVVCYTVM 305
           LAA+NLLNHM+EVG  P VLHFTTLI+GLSRAGNLDACKYFFDE+   GC+PDVVCYTV+
Sbjct: 320 LAAVNLLNHMKEVGLNPGVLHFTTLIDGLSRAGNLDACKYFFDEMIKIGCMPDVVCYTVI 379

Query: 306 ITSFTEAGQHEKARAFFDEMIMKGQLPNVFTYNSMIRGFCMVGKFKEAYSMLSEMESRGC 365
           IT F  AG+ +KA+  FDEMI  GQLPNVFTYNSMIRG+CM GKF+EA S+L EME+RGC
Sbjct: 380 ITGFIVAGELDKAQEMFDEMIANGQLPNVFTYNSMIRGYCMAGKFEEACSILKEMEARGC 439

Query: 366 RPNFLVYSTLVSYLRNAGKLGEAHKVIKQMVENGQYAHLMTKFKGYRRC 415
            PNF+VYSTLVS+LRNAG+L EA +VIK MVE GQY HL++K K +RRC
Sbjct: 440 NPNFVVYSTLVSHLRNAGRLSEAREVIKNMVEKGQYVHLLSKIKRFRRC 488

[Close]
BLAST of Cucsa.107790 vs. TAIR10
Match: AT1G55630.1 (AT1G55630.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 569.3 bits (1466), Expect = 1.9e-162
Identity = 271/408 (66.42%), Postives = 330/408 (80.88%), Query Frame = 1 

Query: 6   KRSFLKDAKIDAEKVIEILKQDGPGFDTFLALDELQLKVSGVLVGEVLKGILKSKSVLNK 65
           ++ F++  K+ A +V++ L+QD PGF+T  ALDEL + +SG+LV EVL GIL++ S  NK
Sbjct: 69  RKRFMESTKLSASRVLDTLQQDCPGFNTKSALDELNVSISGLLVREVLVGILRTLSFDNK 128

Query: 66  TQCAKLGYKFFIWSGRIENYRHTVNSYHIIMKIFAECEEFKAMWRVLDEMTEKGYPVTAR 125
           T+CAKL YKFF+W G  EN+RHT N YH++MKIFAEC E+KAM R++DEM + GYP TA 
Sbjct: 129 TRCAKLAYKFFVWCGGQENFRHTANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTAC 188

Query: 126 TFMILICTCGEAGLAKRVVERFIKSKTFNFRPYKHSYNAILHGLVIVKQYKLIGWVYDQM 185
           TF +LICTCGEAGLA+ VVE+FIKSKTFN+RPYKHSYNAILH L+ VKQYKLI WVY+QM
Sbjct: 189 TFNLLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQM 248

Query: 186 LLDDHSPDILTYNVLLFSSCKLGKLDQFHRLLDEMARKGFSPDFHTYNILLYVLGKGDKP 245
           L D  +PD+LTYN+++F++ +LGK D+ +RLLDEM + GFSPD +TYNILL+ L  G+KP
Sbjct: 249 LEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKP 308

Query: 246 LAALNLLNHMREVGFGPNVLHFTTLINGLSRAGNLDACKYFFDELGNNGCIPDVVCYTVM 305
           LAALNLLNHMREVG  P V+HFTTLI+GLSRAG L+ACKYF DE    GC PDVVCYTVM
Sbjct: 309 LAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVM 368

Query: 306 ITSFTEAGQHEKARAFFDEMIMKGQLPNVFTYNSMIRGFCMVGKFKEAYSMLSEMESRGC 365
           IT +   G+ EKA   F EM  KGQLPNVFTYNSMIRGFCM GKFKEA ++L EMESRGC
Sbjct: 369 ITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGC 428

Query: 366 RPNFLVYSTLVSYLRNAGKLGEAHKVIKQMVENGQYAHLMTKFKGYRR 414
            PNF+VYSTLV+ L+NAGK+ EAH+V+K MVE G Y HL++K K YRR
Sbjct: 429 NPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKGHYVHLISKLKKYRR 476

[Close]
BLAST of Cucsa.107790 vs. TAIR10
Match: AT3G60050.1 (AT3G60050.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 556.6 bits (1433), Expect = 1.3e-158
Identity = 266/405 (65.68%), Postives = 329/405 (81.23%), Query Frame = 1 

Query: 9   FLKDAKIDAEKVIEILKQDGPGFDTFLALDELQLKVSGVLVGEVLKGILKSKSVLNKTQC 68
           FL+ A   A +V+  L+ D  GF++   LDEL ++VSG+LV EVL GIL++ S  NK +C
Sbjct: 69  FLESANHSASRVLVTLQLDESGFNSKSVLDELNVRVSGLLVREVLVGILRNLSYDNKARC 128

Query: 69  AKLGYKFFIWSGRIENYRHTVNSYHIIMKIFAECEEFKAMWRVLDEMTEKGYPVTARTFM 128
           AKL Y+FF+WSG  E +RHTVNSYH++MKIFAEC E+KAMWR++DEM + G+P TARTF 
Sbjct: 129 AKLAYRFFLWSGEQECFRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFN 188

Query: 129 ILICTCGEAGLAKRVVERFIKSKTFNFRPYKHSYNAILHGLVIVKQYKLIGWVYDQMLLD 188
           +LIC+CGEAGLAK+ V +F+KSKTFN+RP+KHSYNAIL+ L+ VKQYKLI WVY QML D
Sbjct: 189 LLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLED 248

Query: 189 DHSPDILTYNVLLFSSCKLGKLDQFHRLLDEMARKGFSPDFHTYNILLYVLGKGDKPLAA 248
             SPD+LTYN+LL+++ +LGK+D+F RL DEMAR GFSPD +TYNILL++LGKG+KPLAA
Sbjct: 249 GFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAA 308

Query: 249 LNLLNHMREVGFGPNVLHFTTLINGLSRAGNLDACKYFFDELGNNGCIPDVVCYTVMITS 308
           L  LNHM+EVG  P+VLH+TTLI+GLSRAGNL+ACKYF DE+   GC PDVVCYTVMIT 
Sbjct: 309 LTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITG 368

Query: 309 FTEAGQHEKARAFFDEMIMKGQLPNVFTYNSMIRGFCMVGKFKEAYSMLSEMESRGCRPN 368
           +  +G+ +KA+  F EM +KGQLPNVFTYNSMIRG CM G+F+EA  +L EMESRGC PN
Sbjct: 369 YVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPN 428

Query: 369 FLVYSTLVSYLRNAGKLGEAHKVIKQMVENGQYAHLMTKFKGYRR 414
           F+VYSTLVSYLR AGKL EA KVI++MV+ G Y HL+ K   YRR
Sbjct: 429 FVVYSTLVSYLRKAGKLSEARKVIREMVKKGHYVHLVPKMMKYRR 473

[Close]
BLAST of Cucsa.107790 vs. TAIR10
Match: AT5G65820.1 (AT5G65820.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 159.1 bits (401), Expect = 6.0e-39
Identity = 107/396 (27.02%), Postives = 189/396 (47.73%), Query Frame = 1 

Query: 6   KRSFLKDAKIDAEKVIEILKQDGPGFDTFLALDELQLKVSGVLVGEVLKGILKSKSVLNK 65
           K S   +   D EK   IL++    F + +   EL L  SGV   E+  G+++   VLN+
Sbjct: 72  KNSKYDEFASDVEKSYRILRK----FHSRVPKLELALNESGV---ELRPGLIER--VLNR 131

Query: 66  T-QCAKLGYKFFIWSGRIENYRHTVNSYHIIMKIFAECEEFKAMWRVLDEM-TEKGYPVT 125
                 LGY+FF+W+ +   Y H++  Y  ++KI ++  +F A+W +++EM  E    + 
Sbjct: 132 CGDAGNLGYRFFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIE 191

Query: 126 ARTFMILICTCGEAGLAKRVVERFIKSKTFNFRPYKHSYNAILHGLVIVKQYKLIGWVYD 185
              F++L+     A + K+ +E   +   F F P ++ +  +L  L      K    +++
Sbjct: 192 PELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFE 251

Query: 186 QMLLDDHSPDILTYNVLLFSSCKLGKLDQFHRLLDEMARKGFSPDFHTYNILLYVLGKGD 245
            M +     ++  +  LL+  C++GK+ +   +L +M   GF PD   Y  LL       
Sbjct: 252 DMRM-RFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAG 311

Query: 246 KPLAALNLLNHMREVGFGPNVLHFTTLINGLSRAGNLDACKYFFDELGNNGCIPDVVCYT 305
           K   A +LL  MR  GF PN   +T LI  L +   ++     F E+    C  DVV YT
Sbjct: 312 KMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYT 371

Query: 306 VMITSFTEAGQHEKARAFFDEMIMKGQLPNVFTYNSMIRGFCMVGKFKEAYSMLSEMESR 365
            +++ F + G+ +K     D+MI KG +P+  TY  ++        F+E   ++ +M   
Sbjct: 372 ALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQI 431

Query: 366 GCRPNFLVYSTLVSYLRNAGKLGEAHKVIKQMVENG 400
              P+  +Y+ ++      G++ EA ++  +M ENG
Sbjct: 432 EYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENG 457


HSP 2 Score: 119.0 bits (297), Expect = 6.9e-27
Identity = 80/309 (25.89%), Postives = 142/309 (45.95%), Query Frame = 1 

Query: 94  IIMKIFAECEEFKAMWRVLDEMTEKGYPVTARTFMILICTCGEAGLAKRVVERFIKSKTF 153
           ++++ FA  +  K    VLDEM + G+      F  L+    + G  K   + F +    
Sbjct: 188 VLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLF-EDMRM 247

Query: 154 NFRPYKHSYNAILHGLVIVKQYKLIGWVYDQMLLDDHSPDILTYNVLLFSSCKLGKLDQF 213
            F      + ++L+G   V +     +V  QM      PDI+ Y  LL      GK+   
Sbjct: 248 RFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADA 307

Query: 214 HRLLDEMARKGFSPDFHTYNILLYVLGKGDKPLAALNLLNHMREVGFGPNVLHFTTLING 273
           + LL +M R+GF P+ + Y +L+  L K D+   A+ +   M       +V+ +T L++G
Sbjct: 308 YDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSG 367

Query: 274 LSRAGNLDACKYFFDELGNNGCIPDVVCYTVMITSFTEAGQHEKARAFFDEMIMKGQLPN 333
             + G +D C    D++   G +P  + Y  ++ +  +    E+     ++M      P+
Sbjct: 368 FCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPD 427

Query: 334 VFTYNSMIRGFCMVGKFKEAYSMLSEMESRGCRPNFLVYSTLVSYLRNAGKLGEAHKVIK 393
           +  YN +IR  C +G+ KEA  + +EME  G  P    +  +++ L + G L EA    K
Sbjct: 428 IGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFK 487

Query: 394 QMVENGQYA 403
           +MV  G ++
Sbjct: 488 EMVTRGLFS 495


HSP 3 Score: 89.4 bits (220), Expect = 5.8e-18
Identity = 74/317 (23.34%), Postives = 134/317 (42.27%), Query Frame = 1 

Query: 86  RHTVNSYHIIMKIFAECEEFKAMWR--VLDEMTEKGYPVTARTFMILICTCGEAGLAKRV 145
           R  VN  +    ++  C   K M    VL +M E G+      +  L+     AG     
Sbjct: 247 RFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADA 306

Query: 146 VERFIKSKTFNFRPYKHSYNAILHGLVIVKQYKLIGWVYDQMLLDDHSPDILTYNVLLFS 205
            +     +   F P  + Y  ++  L  V + +    V+ +M   +   D++TY  L+  
Sbjct: 307 YDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSG 366

Query: 206 SCKLGKLDQFHRLLDEMARKGFSPDFHTYNILLYVLGKGDKPLAALNLLNHMREVGFGPN 265
            CK GK+D+ + +LD+M +KG  P   TY  ++    K +     L L+  MR++ + P+
Sbjct: 367 FCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPD 426

Query: 266 VLHFTTLINGLSRAGNLDACKYFFDELGNNGCIPDVVCYTVMITSFTEAGQHEKARAFFD 325
           +  +  +I    + G +      ++E+  NG  P V  + +MI      G   +A   F 
Sbjct: 427 IGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFK 486

Query: 326 EMIMKG--QLPNVFTYNSMIRGFCMVGKFKEAYSMLSEMESRG-CRPNFLVYSTLVSYLR 385
           EM+ +G   +    T   ++       K + A  + S + S+G C  N L ++  +  L 
Sbjct: 487 EMVTRGLFSVSQYGTLKLLLNTVLKDKKLEMAKDVWSCITSKGACELNVLSWTIWIHALF 546

Query: 386 NAGKLGEAHKVIKQMVE 398
           + G   EA     +M+E
Sbjct: 547 SKGYEKEACSYCIEMIE 563

[Close]
BLAST of Cucsa.107790 vs. TAIR10
Match: AT3G60040.1 (AT3G60040.1 F-box family protein)

HSP 1 Score: 155.6 bits (392), Expect = 6.6e-38
Identity = 74/120 (61.67%), Postives = 90/120 (75.00%), Query Frame = 1 

Query: 294 GCIPDVVCYTVMITSFTEAGQHEKARAFFDEMIMKGQLPNVFTYNSMIRGFCMVGKFKEA 353
           G  P V+ YT +I  +  +G+ +KA+  F EM +KGQLPNVFTYNSMIRG CM G+F+EA
Sbjct: 719 GIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREA 778

Query: 354 YSMLSEMESRGCRPNFLVYSTLVSYLRNAGKLGEAHKVIKQMVENGQYAHLMTKFKGYRR 413
             +L EMESRGC PNF+VYSTLV YLR AGKL EA KVIK+MV+ G Y HL++K   YRR
Sbjct: 779 CWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKGHYVHLVSKMMKYRR 838


HSP 2 Score: 109.0 bits (271), Expect = 7.1e-24
Identity = 57/131 (43.51%), Postives = 78/131 (59.54%), Query Frame = 1 

Query: 234 ILLYVLGKGDKPLAALNLLNHMREVGFGPNVLHFTTLINGLSRAGNLDACKYFFDELGNN 293
           ILL++LGKG+KPLAAL  LNHM+EVG  P+VLH+TTLI+G   +G LD  K  F E+   
Sbjct: 694 ILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVK 753

Query: 294 GCIPDVVCYTVMITSFTEAGQHEKARAFFDEMIMKGQLPNVFTYNSMIRGFCMVGKFKEA 353
           G +P+V  Y  MI     AG+  +A     EM  +G  PN   Y++++      GK  EA
Sbjct: 754 GQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEA 813

Query: 354 YSMLSEMESRG 365
             ++ EM  +G
Sbjct: 814 RKVIKEMVKKG 824


HSP 3 Score: 48.1 bits (113), Expect = 1.5e-05
Identity = 44/188 (23.40%), Postives = 78/188 (41.49%), Query Frame = 1 

Query: 37  LDELQLKVSGVLVGEVLKGILKSKSVLNKTQCAKLGYKFFIWSGRIENYRHTVNSYHIIM 96
           LDEL ++VSG+LV  VL G          TQ   +                      I++
Sbjct: 669 LDELNVRVSGILVIGVLDG----------TQLLLI----------------------ILL 728

Query: 97  KIFAECEEFKAMWRVLDEMTEKGYPVTARTFMILICTCGEAGLAKRVVERFIKSKTFNFR 156
            I  +  +  A    L+ M E G   +   +  LI     +G   +  E F +       
Sbjct: 729 HILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQL 788

Query: 157 PYKHSYNAILHGLVIVKQYKLIGWVYDQMLLDDHSPDILTYNVLLFSSCKLGKLDQFHRL 216
           P   +YN+++ GL +  +++   W+  +M     +P+ + Y+ L+    K GKL +  ++
Sbjct: 789 PNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKV 824

Query: 217 LDEMARKG 225
           + EM +KG
Sbjct: 849 IKEMVKKG 824

[Close]
BLAST of Cucsa.107790 vs. TAIR10
Match: AT3G49730.1 (AT3G49730.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 153.7 bits (387), Expect = 2.5e-37
Identity = 91/331 (27.49%), Postives = 163/331 (49.24%), Query Frame = 1 

Query: 71  LGYKFFIWSGRIENYRHTVNSYHIIMKIFAECEEFKAMWRVLDEMTEKGYP-VTARTFMI 130
           LGY+FF+W+ +   Y H+      ++ I ++  +F A+W +++EM +     +    F++
Sbjct: 113 LGYRFFLWATKQPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFVV 172

Query: 131 LICTCGEAGLAKRVVERFIKSKTFNFRPYKHSYNAILHGLVIVKQYKLIGWVYDQMLLDD 190
           L+     A + K+ VE   +   +   P ++ +  +L  L      K    V++ M  + 
Sbjct: 173 LMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMR-EK 232

Query: 191 HSPDILTYNVLLFSSCKLGKLDQFHRLLDEMARKGFSPDFHTYNILLYVLGKGDKPLAAL 250
             P++  +  LL+  C+ GKL +   +L +M   G  PD   +  LL       K   A 
Sbjct: 233 FPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAY 292

Query: 251 NLLNHMREVGFGPNVLHFTTLINGLSRAGN-LDACKYFFDELGNNGCIPDVVCYTVMITS 310
           +L+N MR+ GF PNV  +T LI  L R    +D     F E+   GC  D+V YT +I+ 
Sbjct: 293 DLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISG 352

Query: 311 FTEAGQHEKARAFFDEMIMKGQLPNVFTYNSMIRGFCMVGKFKEAYSMLSEMESRGCRPN 370
           F + G  +K  +  D+M  KG +P+  TY  ++       +F+E   ++ +M+ RGC P+
Sbjct: 353 FCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPD 412

Query: 371 FLVYSTLVSYLRNAGKLGEAHKVIKQMVENG 400
            L+Y+ ++      G++ EA ++  +M  NG
Sbjct: 413 LLIYNVVIRLACKLGEVKEAVRLWNEMEANG 442


HSP 2 Score: 65.9 bits (159), Expect = 6.9e-11
Identity = 61/268 (22.76%), Postives = 114/268 (42.54%), Query Frame = 1 

Query: 81  RIENYRHTVNSYHIIMKIFAECEE-FKAMWRVLDEMTEKGYPVTARTFMILICTCGEAGL 140
           R   +   VN Y ++++     E+      RV  EM   G      T+  LI    + G+
Sbjct: 298 RKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGM 357

Query: 141 AKRVVERFIKSKTFNFRPYKHSYNAILHGLVIVKQYKLIGWVYDQMLLDDHSPDILTYNV 200
             +        +     P + +Y  I+      +Q++    + ++M      PD+L YNV
Sbjct: 358 IDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNV 417

Query: 201 LLFSSCKLGKLDQFHRLLDEMARKGFSPDFHTYNILLYVLGKGDKPLAALNLLNHM--RE 260
           ++  +CKLG++ +  RL +EM   G SP   T+ I++         + A N    M  R 
Sbjct: 418 VIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRG 477

Query: 261 VGFGPNVLHFTTLINGLSRAGNLDACKYFFDELGN--NGCIPDVVCYTVMITSFTEAGQH 320
           +   P      +L+N L R   L+  K  +  + N  + C  +V  +T+ I +    G  
Sbjct: 478 IFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSSCELNVSAWTIWIHALYAKGHV 537

Query: 321 EKARAFFDEMIMKGQLPNVFTYNSMIRG 344
           ++A ++  +M+    +P   TY  +++G
Sbjct: 538 KEACSYCLDMMEMDLMPQPNTYAKLMKG 565

[Close]
BLAST of Cucsa.107790 vs. NCBI nr
Match: gi|449446161|ref|XP_004140840.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g55630-like [Cucumis sativus])

HSP 1 Score: 835.1 bits (2156), Expect = 5.3e-239
Identity = 408/409 (99.76%), Postives = 409/409 (100.00%), Query Frame = 1 

Query: 6   KRSFLKDAKIDAEKVIEILKQDGPGFDTFLALDELQLKVSGVLVGEVLKGILKSKSVLNK 65
           +RSFLKDAKIDAEKVIEILKQDGPGFDTFLALDELQLKVSGVLVGEVLKGILKSKSVLNK
Sbjct: 68  RRSFLKDAKIDAEKVIEILKQDGPGFDTFLALDELQLKVSGVLVGEVLKGILKSKSVLNK 127

Query: 66  TQCAKLGYKFFIWSGRIENYRHTVNSYHIIMKIFAECEEFKAMWRVLDEMTEKGYPVTAR 125
           TQCAKLGYKFFIWSGRIENYRHTVNSYHIIMKIFAECEEFKAMWRVLDEMTEKGYPVTAR
Sbjct: 128 TQCAKLGYKFFIWSGRIENYRHTVNSYHIIMKIFAECEEFKAMWRVLDEMTEKGYPVTAR 187

Query: 126 TFMILICTCGEAGLAKRVVERFIKSKTFNFRPYKHSYNAILHGLVIVKQYKLIGWVYDQM 185
           TFMILICTCGEAGLAKRVVERFIKSKTFNFRPYKHSYNAILHGLVIVKQYKLIGWVYDQM
Sbjct: 188 TFMILICTCGEAGLAKRVVERFIKSKTFNFRPYKHSYNAILHGLVIVKQYKLIGWVYDQM 247

Query: 186 LLDDHSPDILTYNVLLFSSCKLGKLDQFHRLLDEMARKGFSPDFHTYNILLYVLGKGDKP 245
           LLDDHSPDILTYNVLLFSSCKLGKLDQFHRLLDEMARKGFSPDFHTYNILLYVLGKGDKP
Sbjct: 248 LLDDHSPDILTYNVLLFSSCKLGKLDQFHRLLDEMARKGFSPDFHTYNILLYVLGKGDKP 307

Query: 246 LAALNLLNHMREVGFGPNVLHFTTLINGLSRAGNLDACKYFFDELGNNGCIPDVVCYTVM 305
           LAALNLLNHMREVGFGPNVLHFTTLINGLSRAGNLDACKYFFDELGNNGCIPDVVCYTVM
Sbjct: 308 LAALNLLNHMREVGFGPNVLHFTTLINGLSRAGNLDACKYFFDELGNNGCIPDVVCYTVM 367

Query: 306 ITSFTEAGQHEKARAFFDEMIMKGQLPNVFTYNSMIRGFCMVGKFKEAYSMLSEMESRGC 365
           ITSFTEAGQHEKARAFFDEMIMKGQLPNVFTYNSMIRGFCMVGKFKEAYSMLSEMESRGC
Sbjct: 368 ITSFTEAGQHEKARAFFDEMIMKGQLPNVFTYNSMIRGFCMVGKFKEAYSMLSEMESRGC 427

Query: 366 RPNFLVYSTLVSYLRNAGKLGEAHKVIKQMVENGQYAHLMTKFKGYRRC 415
           RPNFLVYSTLVSYLRNAGKLGEAHKVIKQMVENGQYAHLMTKFKGYRRC
Sbjct: 428 RPNFLVYSTLVSYLRNAGKLGEAHKVIKQMVENGQYAHLMTKFKGYRRC 476

[Close]
BLAST of Cucsa.107790 vs. NCBI nr
Match: gi|659077478|ref|XP_008439226.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g55630-like [Cucumis melo])

HSP 1 Score: 796.6 bits (2056), Expect = 2.1e-227
Identity = 385/409 (94.13%), Postives = 399/409 (97.56%), Query Frame = 1 

Query: 6   KRSFLKDAKIDAEKVIEILKQDGPGFDTFLALDELQLKVSGVLVGEVLKGILKSKSVLNK 65
           +RSFLKDAKIDAEKVIEILKQDGPGFDTFLALDEL+L+VSGVLVGEVLKGILKS SVLNK
Sbjct: 68  RRSFLKDAKIDAEKVIEILKQDGPGFDTFLALDELKLQVSGVLVGEVLKGILKSTSVLNK 127

Query: 66  TQCAKLGYKFFIWSGRIENYRHTVNSYHIIMKIFAECEEFKAMWRVLDEMTEKGYPVTAR 125
           TQCAKLGYKFF+WS RIENYRHTV SYH+IMKIFAECEEFKAMWR+LDEMTEKGYPVTAR
Sbjct: 128 TQCAKLGYKFFVWSSRIENYRHTVKSYHMIMKIFAECEEFKAMWRLLDEMTEKGYPVTAR 187

Query: 126 TFMILICTCGEAGLAKRVVERFIKSKTFNFRPYKHSYNAILHGLVIVKQYKLIGWVYDQM 185
           TFMILICTCG+AGLAK+VVERFIKSKTFNFRPYKHSYNAILHGLV+VKQYKLI WVY+QM
Sbjct: 188 TFMILICTCGDAGLAKKVVERFIKSKTFNFRPYKHSYNAILHGLVVVKQYKLIEWVYEQM 247

Query: 186 LLDDHSPDILTYNVLLFSSCKLGKLDQFHRLLDEMARKGFSPDFHTYNILLYVLGKGDKP 245
           LLD H PDILTYNVLLFS CKLGKLDQFHRLLDEMARKGFSPDFHTYNILLYVLGKGDKP
Sbjct: 248 LLDGHGPDILTYNVLLFSRCKLGKLDQFHRLLDEMARKGFSPDFHTYNILLYVLGKGDKP 307

Query: 246 LAALNLLNHMREVGFGPNVLHFTTLINGLSRAGNLDACKYFFDELGNNGCIPDVVCYTVM 305
           LAALNLLNHMREVGFGPN+LHFTTLINGLSRAGNLDACKYFFDELGN+ CIPDVVCYTVM
Sbjct: 308 LAALNLLNHMREVGFGPNILHFTTLINGLSRAGNLDACKYFFDELGNHDCIPDVVCYTVM 367

Query: 306 ITSFTEAGQHEKARAFFDEMIMKGQLPNVFTYNSMIRGFCMVGKFKEAYSMLSEMESRGC 365
           ITS+TEAGQHEKARAFFDEMIMKGQLPNVFTYNSMIRGFCMVGKFKEAYSMLSEMESRGC
Sbjct: 368 ITSYTEAGQHEKARAFFDEMIMKGQLPNVFTYNSMIRGFCMVGKFKEAYSMLSEMESRGC 427

Query: 366 RPNFLVYSTLVSYLRNAGKLGEAHKVIKQMVENGQYAHLMTKFKGYRRC 415
           RPNFLVYSTLVSYLRNAGKL EAHKVI +MVENGQYAHLMTKFKGYRRC
Sbjct: 428 RPNFLVYSTLVSYLRNAGKLAEAHKVITRMVENGQYAHLMTKFKGYRRC 476

[Close]
BLAST of Cucsa.107790 vs. NCBI nr
Match: gi|645257085|ref|XP_008234250.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g60050-like [Prunus mume])

HSP 1 Score: 641.0 bits (1652), Expect = 1.5e-180
Identity = 302/409 (73.84%), Postives = 353/409 (86.31%), Query Frame = 1 

Query: 6   KRSFLKDAKIDAEKVIEILKQDGPGFDTFLALDELQLKVSGVLVGEVLKGILKSKSVLNK 65
           +RSF ++AKI   +V+E+L+QDGPGFDT  ALDEL ++VSG+LV EVL  ILK  +  +K
Sbjct: 79  RRSFFENAKIHTRRVLEVLQQDGPGFDTKAALDELHIEVSGLLVREVLFNILKQVNYASK 138

Query: 66  TQCAKLGYKFFIWSGRIENYRHTVNSYHIIMKIFAECEEFKAMWRVLDEMTEKGYPVTAR 125
            +CAKLGYKFF+WSG++ENYRHT N+YH++MKIFA+CEEFKAMWR++DEM EKGYP TA+
Sbjct: 139 MRCAKLGYKFFVWSGQLENYRHTANTYHLMMKIFADCEEFKAMWRLVDEMIEKGYPTTAQ 198

Query: 126 TFMILICTCGEAGLAKRVVERFIKSKTFNFRPYKHSYNAILHGLVIVKQYKLIGWVYDQM 185
           TF ILI TCGEAGLAK+VVERFIKSKTFN+RP+KHSYNAILH LV+VKQYKLI WVY QM
Sbjct: 199 TFSILIRTCGEAGLAKKVVERFIKSKTFNYRPFKHSYNAILHSLVVVKQYKLIEWVYQQM 258

Query: 186 LLDDHSPDILTYNVLLFSSCKLGKLDQFHRLLDEMARKGFSPDFHTYNILLYVLGKGDKP 245
           L D H  DILTYNV++++  +LGKLDQFHRLL+EM R GF+PDFHTYNILL+VLGKGDKP
Sbjct: 259 LADGHCTDILTYNVMMYAKYRLGKLDQFHRLLEEMGRSGFAPDFHTYNILLHVLGKGDKP 318

Query: 246 LAALNLLNHMREVGFGPNVLHFTTLINGLSRAGNLDACKYFFDELGNNGCIPDVVCYTVM 305
           LAALNLLNHM+EVGF P+VLHFTTLI+GLSRAGNLDACKYFFDE+  + C PDVVCYTVM
Sbjct: 319 LAALNLLNHMKEVGFDPSVLHFTTLIDGLSRAGNLDACKYFFDEMIKHECFPDVVCYTVM 378

Query: 306 ITSFTEAGQHEKARAFFDEMIMKGQLPNVFTYNSMIRGFCMVGKFKEAYSMLSEMESRGC 365
           I+ +  AG+ EKA+  FDEMI  GQLPNVFTYN+MIRG CM GKF+EA SML +MESRGC
Sbjct: 379 ISGYIVAGELEKAQGVFDEMIPNGQLPNVFTYNAMIRGLCMAGKFEEACSMLKDMESRGC 438

Query: 366 RPNFLVYSTLVSYLRNAGKLGEAHKVIKQMVENGQYAHLMTKFKGYRRC 415
            PNF VYSTLVSYLRNAGK  +AH+VI  MVE GQY HL++KFKGYRRC
Sbjct: 439 NPNFTVYSTLVSYLRNAGKRAKAHEVITHMVEKGQYTHLLSKFKGYRRC 487

[Close]
BLAST of Cucsa.107790 vs. NCBI nr
Match: gi|596041207|ref|XP_007220061.1| (hypothetical protein PRUPE_ppa025794mg [Prunus persica])

HSP 1 Score: 641.0 bits (1652), Expect = 1.5e-180
Identity = 301/409 (73.59%), Postives = 353/409 (86.31%), Query Frame = 1 

Query: 6   KRSFLKDAKIDAEKVIEILKQDGPGFDTFLALDELQLKVSGVLVGEVLKGILKSKSVLNK 65
           +RSF ++AKI   +V+E+L+QDGPGFDT  ALDEL ++VSG+LV EVL  ILK  +  +K
Sbjct: 38  RRSFFENAKIHTRRVLEVLQQDGPGFDTKAALDELHIEVSGLLVREVLFKILKQVNYASK 97

Query: 66  TQCAKLGYKFFIWSGRIENYRHTVNSYHIIMKIFAECEEFKAMWRVLDEMTEKGYPVTAR 125
            +CAKLGYKFF+WSG++ENYRHT N+YH++MKIFA+CEEFKAMWR++DEM EKGYP TA+
Sbjct: 98  MRCAKLGYKFFVWSGQLENYRHTANTYHLMMKIFADCEEFKAMWRLVDEMIEKGYPTTAQ 157

Query: 126 TFMILICTCGEAGLAKRVVERFIKSKTFNFRPYKHSYNAILHGLVIVKQYKLIGWVYDQM 185
           TF ILICTCGEAGLAK+VVERFIKSKTFN+RP+KHSYNAILH LV+VKQYKLI WVY QM
Sbjct: 158 TFNILICTCGEAGLAKKVVERFIKSKTFNYRPFKHSYNAILHSLVVVKQYKLIEWVYQQM 217

Query: 186 LLDDHSPDILTYNVLLFSSCKLGKLDQFHRLLDEMARKGFSPDFHTYNILLYVLGKGDKP 245
           L D H  DILTYNV++++  +LGKLDQFHRLL+EM R GF+PD HTYNILL+VLGKGDKP
Sbjct: 218 LADGHCTDILTYNVMMYAKYRLGKLDQFHRLLEEMGRSGFAPDLHTYNILLHVLGKGDKP 277

Query: 246 LAALNLLNHMREVGFGPNVLHFTTLINGLSRAGNLDACKYFFDELGNNGCIPDVVCYTVM 305
           LAALNLLNHM+EVG  P+VLHFTTLI+GLSR+GNLDACKYFFDE+  + C PDVVCYTVM
Sbjct: 278 LAALNLLNHMKEVGLDPSVLHFTTLIDGLSRSGNLDACKYFFDEMIKHECFPDVVCYTVM 337

Query: 306 ITSFTEAGQHEKARAFFDEMIMKGQLPNVFTYNSMIRGFCMVGKFKEAYSMLSEMESRGC 365
           I+ +  AG+ EKA+  FDEMI  GQLPNVFTYN+MIRG CM GKF+EA SML +MESRGC
Sbjct: 338 ISGYIVAGELEKAQGVFDEMIPNGQLPNVFTYNAMIRGLCMAGKFEEACSMLKDMESRGC 397

Query: 366 RPNFLVYSTLVSYLRNAGKLGEAHKVIKQMVENGQYAHLMTKFKGYRRC 415
            PNF VYSTLVSYLRNAGKL +AH+VI  MVE GQY HL++KFKGYRRC
Sbjct: 398 NPNFTVYSTLVSYLRNAGKLAKAHEVITHMVEKGQYTHLLSKFKGYRRC 446

[Close]
BLAST of Cucsa.107790 vs. NCBI nr
Match: gi|703141203|ref|XP_010107444.1| (hypothetical protein L484_015785 [Morus notabilis])

HSP 1 Score: 639.8 bits (1649), Expect = 3.3e-180
Identity = 302/409 (73.84%), Postives = 352/409 (86.06%), Query Frame = 1 

Query: 6   KRSFLKDAKIDAEKVIEILKQDGPGFDTFLALDELQLKVSGVLVGEVLKGILKSKSVLNK 65
           ++SF + A+IDA +V+E+L+QDGPGFD   ALDEL ++VSG+LV +VL GIL + S  NK
Sbjct: 90  RQSFFETARIDAGRVLEVLQQDGPGFDAKPALDELNIRVSGLLVRKVLLGILSNISHTNK 149

Query: 66  TQCAKLGYKFFIWSGRIENYRHTVNSYHIIMKIFAECEEFKAMWRVLDEMTEKGYPVTAR 125
            +CAKLG+KFF WSG+  NYRHT NSYH+++KIFAECEEFKAMWR++DEM E+G+P TAR
Sbjct: 150 IRCAKLGFKFFTWSGQQGNYRHTANSYHLLIKIFAECEEFKAMWRLVDEMIERGFPTTAR 209

Query: 126 TFMILICTCGEAGLAKRVVERFIKSKTFNFRPYKHSYNAILHGLVIVKQYKLIGWVYDQM 185
           T  ILICTCGEAGLA++VVERFIKSKTFNFRP+KHSYNAILH L++  QYKLI WVY QM
Sbjct: 210 TLNILICTCGEAGLARKVVERFIKSKTFNFRPFKHSYNAILHCLLVTNQYKLIEWVYQQM 269

Query: 186 LLDDHSPDILTYNVLLFSSCKLGKLDQFHRLLDEMARKGFSPDFHTYNILLYVLGKGDKP 245
           L D  SPDILTYNVL+ +  +LGKLDQFHRLLDEM R+GFSPD HTYNILL+VLGKGDKP
Sbjct: 270 LADGFSPDILTYNVLMLTKYRLGKLDQFHRLLDEMGRRGFSPDLHTYNILLHVLGKGDKP 329

Query: 246 LAALNLLNHMREVGFGPNVLHFTTLINGLSRAGNLDACKYFFDELGNNGCIPDVVCYTVM 305
           LAALNLLNHM+E G  P VLHFTTLI+GLSRAGNLDAC++FFDE+  NGCIPDVVCYTVM
Sbjct: 330 LAALNLLNHMKETGIDPGVLHFTTLIDGLSRAGNLDACRFFFDEMPKNGCIPDVVCYTVM 389

Query: 306 ITSFTEAGQHEKARAFFDEMIMKGQLPNVFTYNSMIRGFCMVGKFKEAYSMLSEMESRGC 365
           IT +  AG+ EKA++ FDEMI KGQ+PNVFTYNSMIRG CM GKF+EA SML +MESRGC
Sbjct: 390 ITGYVVAGELEKAQSIFDEMITKGQIPNVFTYNSMIRGLCMAGKFEEACSMLKDMESRGC 449

Query: 366 RPNFLVYSTLVSYLRNAGKLGEAHKVIKQMVENGQYAHLMTKFKGYRRC 415
            PNFLVY+TLVS LRNAGKL EAH+V+K MVE GQY HL++KFKGYRRC
Sbjct: 450 NPNFLVYTTLVSNLRNAGKLSEAHQVVKHMVEKGQYVHLLSKFKGYRRC 498

The following BLAST results are available for this feature:
BLAST of Cucsa.107790 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PPR81_ARATH3.4e-16166.42Pentatricopeptide repeat-containing protein At1g55630 OS=Arabidopsis thaliana GN... [more]
PP288_ARATH2.3e-15765.68Pentatricopeptide repeat-containing protein At3g60050 OS=Arabidopsis thaliana GN... [more]
PP447_ARATH1.1e-3727.02Putative pentatricopeptide repeat-containing protein At5g65820 OS=Arabidopsis th... [more]
PP298_ARATH1.2e-3630.84Pentatricopeptide repeat-containing protein At4g01400, mitochondrial OS=Arabidop... [more]
PP275_ARATH4.5e-3627.49Pentatricopeptide repeat-containing protein At3g49730 OS=Arabidopsis thaliana GN... [more]
BLAST of Cucsa.107790 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L8P4_CUCSA3.7e-23999.76Uncharacterized protein OS=Cucumis sativus GN=Csa_3G182100 PE=4 SV=1[more]
M5XQE6_PRUPE1.0e-18073.59Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025794mg PE=4 SV=1[more]
W9S7I4_9ROSA2.3e-18073.84Uncharacterized protein OS=Morus notabilis GN=L484_015785 PE=4 SV=1[more]
V4S4A4_9ROSI5.3e-17772.37Uncharacterized protein OS=Citrus clementina GN=CICLE_v10004849mg PE=4 SV=1[more]
A0A061G067_THECC6.9e-17772.13Pentatricopeptide repeat (PPR) superfamily protein OS=Theobroma cacao GN=TCM_015... [more]
BLAST of Cucsa.107790 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G55630.11.9e-16266.42 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT3G60050.11.3e-15865.68 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT5G65820.16.0e-3927.02 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT3G60040.16.6e-3861.67 F-box family protein[more]
AT3G49730.12.5e-3727.49 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
BLAST of Cucsa.107790 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449446161|ref|XP_004140840.1|5.3e-23999.76PREDICTED: pentatricopeptide repeat-containing protein At1g55630-like [Cucumis s... [more]
gi|659077478|ref|XP_008439226.1|2.1e-22794.13PREDICTED: pentatricopeptide repeat-containing protein At1g55630-like [Cucumis m... [more]
gi|645257085|ref|XP_008234250.1|1.5e-18073.84PREDICTED: pentatricopeptide repeat-containing protein At3g60050-like [Prunus mu... [more]
gi|596041207|ref|XP_007220061.1|1.5e-18073.59hypothetical protein PRUPE_ppa025794mg [Prunus persica][more]
gi|703141203|ref|XP_010107444.1|3.3e-18073.84hypothetical protein L484_015785 [Morus notabilis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.107790.1Cucsa.107790.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 267..295
score: 4.
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 192..239
score: 2.8E-11coord: 297..345
score: 2.2
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 356..399
score: 0.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 91..123
score: 8.2E-4coord: 371..399
score: 4.3E-4coord: 196..228
score: 1.2E-5coord: 335..368
score: 1.1E-11coord: 267..299
score: 4.8E-7coord: 230..264
score: 1.4E-5coord: 300..334
score: 3.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 298..332
score: 11.378coord: 333..367
score: 14.524coord: 88..122
score: 8.901coord: 158..192
score: 6.697coord: 228..262
score: 9.887coord: 368..402
score: 8.934coord: 193..227
score: 11.893coord: 263..297
score: 10.337coord: 123..157
score: 6
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 63..405
score: 2.8E-207coord: 17..39
score: 2.8E
NoneNo IPR availablePANTHERPTHR24015:SF361SUBFAMILY NOT NAMEDcoord: 17..39
score: 2.8E-207coord: 63..405
score: 2.8E