Cp4.1LG08g09030 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG08g09030
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Acyl-CoA-binding protein
Location	Cp4.1LG08 : 7128496 .. 7130580 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAGATAAATTACTCGGCGATTTTTTTCTGCTCCTCTTTCTTCGCTCGTGTATTTATACGCTCCACACTCATCTTCTTCCTAGTTAGTGTTTCCTAACCGTAATCGAGCTTCAAGCGTGTAGGAACAAAGAAGAATCGCCATGGGTTTGAAGGTATGTTCCTTCTCTTATTGTTCTTCTCCAATCTGAAGTTTATTAGCTTATTAGCTTCGATTTTTTTGATCTCTATCTCTTCTTGGACATTTCTTGTTCGATCAGTAGTTGAATTTTTTTTGTTTTGTGTACGTGATTCGATGTTGAACGATTATGCTTTAAGTTTTGCTTGCTGATCTTGGCATTGAATTGAGGAATGGCTACAGATCACTGCATATTTTCTGTTTGGTGTCATAGTCACGCATTGCCAGTATAATTGATTGGCTAGCGTTCGTTGCTTTCTGTTTAATTTATCTTTTCGGATCTGTTTTTTGAGTCGATTTACGTAGTCCTTTCGAAGTATGAACGATATCTGATGGTTTCCAGATCGCCGGCCGTGAAAATCTACTTCCTGTCGGGATTAACTTACAACTCCACTAACCTAAGCTTACCAGATAAGCACATAGGTGTGAAAGCTCAGGGACTAAACTTTAGACATGATGTTTCTCCTTGCCTACTTATAGGATAGGGCATGAAAATCTACTTAAGCATAGGCGGGGAATTTTTATAAGTATGAACGATATCTGGTGGCTTCCAGATTGATAGATATTTCTCCTTGCATACTCATGGGATAAATATTGTACTACTTCCTTCTCTCTCTGTTAATTGTTCTTCGTGGTTGAATTTACATGGCCGTACTTTGACGTCGGCGGTCTTAATCCGTCAGGTTGAAACTTAGATCCGAGGTTGGAAATGACATCACGGTCGTTTCCATCTCCGCCATTTCTCATTTTTCCGAGAAATGTGAAATGAAAAGGCAAAAGTGGTCTTCCAACGAGAATATTTCAGTAATTGGCGAATTCGATCGAGTATCACGGAGACTGTAGTAAAGTAATTTCGCAGTTATTAGAATGCTGACTCGATTTTATTCCAAATTGATAAATTGATTGCTTGAAGTTGTGCATGAACTCTGGATTAGCCTAATAGGACCCTCTAGATGTTAGAGCAGTAGATCCAGAGAATTGTAAGAACACATGGTATCTTTGTGGTGTTCGTTCTATGGAGTACGAATCTAAATGCATGTAGTCTGTGCCACAATTTGATGAGGCTGAGTTCTGCAGGAAGAATTTGAGGAGTATGCTGAAAAGGCAAAGACCTTGCCGGAGAACACAAGCAATGAAAACAAACTCATTCTCTATGGACTATACAAGCAAGCCACTGTTGGAGCCGTGAACACTAGTCAGTTCTTTCTTCCACTCGAATGCAATTTCTGTAGAAACGTGTGTAGTTGGAATTATGGGATCAAACCCTCCAATTAAACCGTTTGTTGCAATTATGACTGATTTGTAGGCCGCCCTGGAGTGTTCTACCAGAGGGACAGAGCCAAATGGGATGCCTGGAAGGCCGTTGAAGGTAATGTTTTAGTATGTTTATATAGAACATTTTTGCTAGTTTTTCTATAGGCGGCAAACCTTTACTCTTAAGTTGGGGGGGAGCTTGGTTGTGAAACTAAGAATTTACCAGAATTGAGCTTTGATCGAAGAGACTGAAATAATTTTGCAGCAAAATCCAAGGATGATGCAATGAGCGACTATATCACCAAGGTGAAACAGTTGCAAGAGTCAGCTGCAGCTAACTGATGAGTTTCTTTAATTATCTGTATGGACAATGATGCTCAAATAATTCTTGTTTAAGTTCAGTACCTTAATCGTATGTATCTAAATTCCTGCGACAATGAACCATTTGTCAGTATTATTACTGTCAGAGTTTGCCAATGCATCCATCTTCTCAACCCTTTAACCAAATCCAGATATCTAATGTCCTTAAAAGCAGGACAATGTGAACTTGCTTGGGAGTCTTTGTCCTTTCGAACGTCAAATTTGTAATAATTTAGCTATTGAACCTAATACCAATTGAGTTTTACACTTCAAAATTTCTAACAATTTGATCATTG

mRNA sequence

TAAGATAAATTACTCGGCGATTTTTTTCTGCTCCTCTTTCTTCGCTCGTGTATTTATACGCTCCACACTCATCTTCTTCCTAGTTAGTGTTTCCTAACCGTAATCGAGCTTCAAGCGTGTAGGAACAAAGAAGAATCGCCATGGGTTTGAAGGAAGAATTTGAGGAGTATGCTGAAAAGGCAAAGACCTTGCCGGAGAACACAAGCAATGAAAACAAACTCATTCTCTATGGACTATACAAGCAAGCCACTGTTGGAGCCGTGAACACTAGCCGCCCTGGAGTGTTCTACCAGAGGGACAGAGCCAAATGGGATGCCTGGAAGGCCGTTGAAGCAAAATCCAAGGATGATGCAATGAGCGACTATATCACCAAGGTGAAACAGTTGCAAGAGTCAGCTGCAGCTAACTGATGAGTTTCTTTAATTATCTGTATGGACAATGATGCTCAAATAATTCTTGTTTAAGTTCAGTACCTTAATCGTATGTATCTAAATTCCTGCGACAATGAACCATTTGTCAGTATTATTACTGTCAGAGTTTGCCAATGCATCCATCTTCTCAACCCTTTAACCAAATCCAGATATCTAATGTCCTTAAAAGCAGGACAATGTGAACTTGCTTGGGAGTCTTTGTCCTTTCGAACGTCAAATTTGTAATAATTTAGCTATTGAACCTAATACCAATTGAGTTTTACACTTCAAAATTTCTAACAATTTGATCATTG

Coding sequence (CDS)

ATGGGTTTGAAGGAAGAATTTGAGGAGTATGCTGAAAAGGCAAAGACCTTGCCGGAGAACACAAGCAATGAAAACAAACTCATTCTCTATGGACTATACAAGCAAGCCACTGTTGGAGCCGTGAACACTAGCCGCCCTGGAGTGTTCTACCAGAGGGACAGAGCCAAATGGGATGCCTGGAAGGCCGTTGAAGCAAAATCCAAGGATGATGCAATGAGCGACTATATCACCAAGGTGAAACAGTTGCAAGAGTCAGCTGCAGCTAACTGA

Protein sequence

MGLKEEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGAVNTSRPGVFYQRDRAKWDAWKAVEAKSKDDAMSDYITKVKQLQESAAAN

Homology

[Close]

BLAST of Cp4.1LG08g09030 vs. Swiss-Prot
Match: ACBP_RICCO (Acyl-CoA-binding protein OS=Ricinus communis PE=3 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 1.8e-35
Identity = 74/89 (83.15%), Postives = 81/89 (91.01%), Query Frame = 1


Query: 1  MGLKEEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGAVNTSRPGVFYQRDRAKWDAW 60
          MGLKE+FEE+AEKAKTLPENT+NENKLILYGLYKQATVG VNTSRPG+F  RDRAKWDAW
Sbjct: 1  MGLKEDFEEHAEKAKTLPENTTNENKLILYGLYKQATVGPVNTSRPGMFNMRDRAKWDAW 60

Query: 61 KAVEAKSKDDAMSDYITKVKQLQESAAAN 90
          KAVE KS ++AMSDYITKVKQL   AAA+
Sbjct: 61 KAVEGKSTEEAMSDYITKVKQLLGEAAAS 89

[Close]

BLAST of Cp4.1LG08g09030 vs. Swiss-Prot
Match: ACBP_FRIAG (Acyl-CoA-binding protein OS=Fritillaria agrestis GN=ACABP PE=3 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 3.2e-32
Identity = 68/87 (78.16%), Postives = 77/87 (88.51%), Query Frame = 1


Query: 1  MGLKEEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGAVNTSRPGVFYQRDRAKWDAW 60
          M LKEEFEE+A KAKTLPE+TSNENKLILYGLYKQ+TVG V+T RPG+F  R+RAKWDAW
Sbjct: 1  MALKEEFEEHAVKAKTLPESTSNENKLILYGLYKQSTVGPVDTGRPGMFSPRERAKWDAW 60

Query: 61 KAVEAKSKDDAMSDYITKVKQLQESAA 88
          KAVE KSK++AM DYITKVKQL E +A
Sbjct: 61 KAVEGKSKEEAMGDYITKVKQLLEESA 87

[Close]

BLAST of Cp4.1LG08g09030 vs. Swiss-Prot
Match: ACBP_GOSHI (Acyl-CoA-binding protein OS=Gossypium hirsutum PE=3 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 1.8e-30
Identity = 65/89 (73.03%), Postives = 76/89 (85.39%), Query Frame = 1


Query: 1  MGLKEEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGAVNTSRPGVFYQRDRAKWDAW 60
          MGLKEEFEE+AEK KTLP   SN++ LILYGLYKQATVG VNTSRPG+F  R++ KWDAW
Sbjct: 1  MGLKEEFEEHAEKVKTLPAAPSNDDMLILYGLYKQATVGPVNTSRPGMFNMREKYKWDAW 60

Query: 61 KAVEAKSKDDAMSDYITKVKQLQESAAAN 90
          KAVE KSK++AM DYITKVKQL E+A ++
Sbjct: 61 KAVEGKSKEEAMGDYITKVKQLFEAAGSS 89

[Close]

BLAST of Cp4.1LG08g09030 vs. Swiss-Prot
Match: ACBP_BRANA (Acyl-CoA-binding protein OS=Brassica napus PE=3 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 2.5e-29
Identity = 64/89 (71.91%), Postives = 75/89 (84.27%), Query Frame = 1


Query: 1  MGLKEEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGAVNTSRPGVFYQRDRAKWDAW 60
          MGLKE+FEE+AEK K L  + SNE+ LILYGLYKQATVG V TSRPG+F  ++RAKWDAW
Sbjct: 1  MGLKEDFEEHAEKVKKLTASPSNEDLLILYGLYKQATVGPVTTSRPGMFSMKERAKWDAW 60

Query: 61 KAVEAKSKDDAMSDYITKVKQLQESAAAN 90
          KAVE KS D+AMSDYITKVKQL E+ A++
Sbjct: 61 KAVEGKSTDEAMSDYITKVKQLLEAEASS 89

[Close]

BLAST of Cp4.1LG08g09030 vs. Swiss-Prot
Match: ACBP6_ARATH (Acyl-CoA-binding domain-containing protein 6 OS=Arabidopsis thaliana GN=ACBP6 PE=1 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 2.8e-28
Identity = 63/88 (71.59%), Postives = 73/88 (82.95%), Query Frame = 1


Query: 1  MGLKEEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGAVNTSRPGVFYQRDRAKWDAW 60
          MGLKEEFEE+AEK  TL E  SNE+ LILYGLYKQA  G V+TSRPG+F  ++RAKWDAW
Sbjct: 1  MGLKEEFEEHAEKVNTLTELPSNEDLLILYGLYKQAKFGPVDTSRPGMFSMKERAKWDAW 60

Query: 61 KAVEAKSKDDAMSDYITKVKQLQESAAA 89
          KAVE KS ++AM+DYITKVKQL E AA+
Sbjct: 61 KAVEGKSSEEAMNDYITKVKQLLEVAAS 88

[Close]

BLAST of Cp4.1LG08g09030 vs. TrEMBL
Match: A0A059Q2J3_9POAL (Acyl-CoA-binding protein OS=Saccharum hybrid cultivar R570 GN=SHCRBa_010_J05_R_210 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 3.9e-37
Identity = 78/89 (87.64%), Postives = 84/89 (94.38%), Query Frame = 1


Query: 1  MGLKEEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGAVNTSRPGVFYQRDRAKWDAW 60
          MGL+EEFEEYAEKAKTLPENTSNENKLILYGLYKQATVG VNT RPG+FYQ+DRAKWDAW
Sbjct: 1  MGLQEEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGIVNTDRPGIFYQKDRAKWDAW 60

Query: 61 KAVEAKSKDDAMSDYITKVKQLQESAAAN 90
          KAVE KSK++AMSDYITKVKQLQE AA +
Sbjct: 61 KAVEGKSKEEAMSDYITKVKQLQEEAATS 89

[Close]

BLAST of Cp4.1LG08g09030 vs. TrEMBL
Match: B6UB43_MAIZE (Acyl-CoA-binding protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 5.1e-37
Identity = 78/89 (87.64%), Postives = 85/89 (95.51%), Query Frame = 1


Query: 1  MGLKEEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGAVNTSRPGVFYQRDRAKWDAW 60
          MGL+EEFEE+AEKAKTLPENTSNENKLILYGLYKQATVG VNT RPG+FYQ+DRAKWDAW
Sbjct: 1  MGLQEEFEEHAEKAKTLPENTSNENKLILYGLYKQATVGDVNTDRPGIFYQKDRAKWDAW 60

Query: 61 KAVEAKSKDDAMSDYITKVKQLQESAAAN 90
          KAVE KSKD+AM+DYITKVKQLQE AAA+
Sbjct: 61 KAVEGKSKDEAMNDYITKVKQLQEEAAAS 89

[Close]

BLAST of Cp4.1LG08g09030 vs. TrEMBL
Match: K9ZUG4_VERFO (Acyl-CoA binding protein 6 OS=Vernicia fordii GN=ACBP6 PE=2 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 1.5e-36
Identity = 79/88 (89.77%), Postives = 83/88 (94.32%), Query Frame = 1


Query: 1  MGLKEEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGAVNTSRPGVFYQRDRAKWDAW 60
          MGLKEEFEEYAEKAKTLPENT+NENKLILYGLYKQATVG VNTSRPG+F QRDRAKWDAW
Sbjct: 1  MGLKEEFEEYAEKAKTLPENTTNENKLILYGLYKQATVGPVNTSRPGIFNQRDRAKWDAW 60

Query: 61 KAVEAKSKDDAMSDYITKVKQLQESAAA 89
          KAVE KSK++AMSDYITKVKQL E AAA
Sbjct: 61 KAVEGKSKEEAMSDYITKVKQLLEEAAA 88

[Close]

BLAST of Cp4.1LG08g09030 vs. TrEMBL
Match: B4FER8_MAIZE (Acyl-CoA-binding protein OS=Zea mays GN=ZEAMMB73_795592 PE=2 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 1.9e-36
Identity = 77/89 (86.52%), Postives = 85/89 (95.51%), Query Frame = 1


Query: 1  MGLKEEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGAVNTSRPGVFYQRDRAKWDAW 60
          MGL+EEFEE+AEKAKTLPE+TSNENKLILYGLYKQATVG VNT RPG+FYQ+DRAKWDAW
Sbjct: 1  MGLQEEFEEHAEKAKTLPESTSNENKLILYGLYKQATVGDVNTDRPGIFYQKDRAKWDAW 60

Query: 61 KAVEAKSKDDAMSDYITKVKQLQESAAAN 90
          KAVE KSKD+AM+DYITKVKQLQE AAA+
Sbjct: 61 KAVEGKSKDEAMNDYITKVKQLQEEAAAS 89

[Close]

BLAST of Cp4.1LG08g09030 vs. TrEMBL
Match: M0SQ12_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 1.9e-36
Identity = 80/88 (90.91%), Postives = 82/88 (93.18%), Query Frame = 1


Query: 1  MGLKEEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGAVNTSRPGVFYQRDRAKWDAW 60
          MGLKEEFEEYAEKAKTLPENT+NENKLILYGLYKQATVG VNTSRPGVF QRDRAKWDAW
Sbjct: 1  MGLKEEFEEYAEKAKTLPENTTNENKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAW 60

Query: 61 KAVEAKSKDDAMSDYITKVKQLQESAAA 89
           AVE KSK+DAMSDYITKVKQL E AAA
Sbjct: 61 MAVEGKSKEDAMSDYITKVKQLLEEAAA 88

[Close]

BLAST of Cp4.1LG08g09030 vs. TAIR10
Match: AT1G31812.1 (AT1G31812.1 acyl-CoA-binding protein 6)

HSP 1 Score: 125.6 bits (314), Expect = 1.6e-29
Identity = 63/88 (71.59%), Postives = 73/88 (82.95%), Query Frame = 1


Query: 1  MGLKEEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGAVNTSRPGVFYQRDRAKWDAW 60
          MGLKEEFEE+AEK  TL E  SNE+ LILYGLYKQA  G V+TSRPG+F  ++RAKWDAW
Sbjct: 1  MGLKEEFEEHAEKVNTLTELPSNEDLLILYGLYKQAKFGPVDTSRPGMFSMKERAKWDAW 60

Query: 61 KAVEAKSKDDAMSDYITKVKQLQESAAA 89
          KAVE KS ++AM+DYITKVKQL E AA+
Sbjct: 61 KAVEGKSSEEAMNDYITKVKQLLEVAAS 88

[Close]

BLAST of Cp4.1LG08g09030 vs. TAIR10
Match: AT5G53470.1 (AT5G53470.1 acyl-CoA binding protein 1)

HSP 1 Score: 55.8 bits (133), Expect = 1.5e-08
Identity = 30/72 (41.67%), Postives = 38/72 (52.78%), Query Frame = 1


Query: 11  AEKAKTLPENTSNENKLILYGLYKQATVGAVNTSRPGVFYQRDRAKWDAWKAVEAKSKDD 70
           A  +  L +  SNE +L LYGLYK AT G     +P       RAKW AW+ + A   ++
Sbjct: 107 AAASDRLSQKVSNELQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWQKLGAMPPEE 166

Query: 71  AMSDYITKVKQL 83
           AM  YI  V QL
Sbjct: 167 AMEKYIDLVTQL 178

[Close]

BLAST of Cp4.1LG08g09030 vs. TAIR10
Match: AT4G27780.1 (AT4G27780.1 acyl-CoA binding protein 2)

HSP 1 Score: 48.5 bits (114), Expect = 2.4e-06
Identity = 26/69 (37.68%), Postives = 35/69 (50.72%), Query Frame = 1


Query: 14  AKTLPENTSNENKLILYGLYKQATVGAVNTSRPGVFYQRDRAKWDAWKAVEAKSKDDAMS 73
           A  L +   ++ +  LYGLYK AT G     +P       RAKW AW+ + A   ++AM 
Sbjct: 120 ADRLSQKVPSDVQQQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWQKLGAMPPEEAME 179

Query: 74  DYITKVKQL 83
            YI  V QL
Sbjct: 180 KYIEIVTQL 188

[Close]

BLAST of Cp4.1LG08g09030 vs. NCBI nr
Match: gi|530277863|gb|AGT15941.1| (acyl-CoA-binding protein [Saccharum hybrid cultivar R570])

HSP 1 Score: 161.8 bits (408), Expect = 5.6e-37
Identity = 78/89 (87.64%), Postives = 84/89 (94.38%), Query Frame = 1


Query: 1  MGLKEEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGAVNTSRPGVFYQRDRAKWDAW 60
          MGL+EEFEEYAEKAKTLPENTSNENKLILYGLYKQATVG VNT RPG+FYQ+DRAKWDAW
Sbjct: 1  MGLQEEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGIVNTDRPGIFYQKDRAKWDAW 60

Query: 61 KAVEAKSKDDAMSDYITKVKQLQESAAAN 90
          KAVE KSK++AMSDYITKVKQLQE AA +
Sbjct: 61 KAVEGKSKEEAMSDYITKVKQLQEEAATS 89

[Close]

BLAST of Cp4.1LG08g09030 vs. NCBI nr
Match: gi|195654217|gb|ACG46576.1| (acyl-CoA-binding protein [Zea mays])

HSP 1 Score: 161.4 bits (407), Expect = 7.3e-37
Identity = 78/89 (87.64%), Postives = 85/89 (95.51%), Query Frame = 1


Query: 1  MGLKEEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGAVNTSRPGVFYQRDRAKWDAW 60
          MGL+EEFEE+AEKAKTLPENTSNENKLILYGLYKQATVG VNT RPG+FYQ+DRAKWDAW
Sbjct: 1  MGLQEEFEEHAEKAKTLPENTSNENKLILYGLYKQATVGDVNTDRPGIFYQKDRAKWDAW 60

Query: 61 KAVEAKSKDDAMSDYITKVKQLQESAAAN 90
          KAVE KSKD+AM+DYITKVKQLQE AAA+
Sbjct: 61 KAVEGKSKDEAMNDYITKVKQLQEEAAAS 89

[Close]

BLAST of Cp4.1LG08g09030 vs. NCBI nr
Match: gi|428754000|gb|AFZ62125.1| (acyl-CoA binding protein 6 [Vernicia fordii])

HSP 1 Score: 159.8 bits (403), Expect = 2.1e-36
Identity = 79/88 (89.77%), Postives = 83/88 (94.32%), Query Frame = 1


Query: 1  MGLKEEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGAVNTSRPGVFYQRDRAKWDAW 60
          MGLKEEFEEYAEKAKTLPENT+NENKLILYGLYKQATVG VNTSRPG+F QRDRAKWDAW
Sbjct: 1  MGLKEEFEEYAEKAKTLPENTTNENKLILYGLYKQATVGPVNTSRPGIFNQRDRAKWDAW 60

Query: 61 KAVEAKSKDDAMSDYITKVKQLQESAAA 89
          KAVE KSK++AMSDYITKVKQL E AAA
Sbjct: 61 KAVEGKSKEEAMSDYITKVKQLLEEAAA 88

[Close]

BLAST of Cp4.1LG08g09030 vs. NCBI nr
Match: gi|743862792|ref|XP_010943634.1| (PREDICTED: acyl-CoA-binding protein [Elaeis guineensis])

HSP 1 Score: 159.5 bits (402), Expect = 2.8e-36
Identity = 79/88 (89.77%), Postives = 83/88 (94.32%), Query Frame = 1


Query: 1  MGLKEEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGAVNTSRPGVFYQRDRAKWDAW 60
          MGLKEEFEEYAEKAKTLPENT+NENKLILYGLYKQATVG VNTSRPG+F  +DRAKWDAW
Sbjct: 1  MGLKEEFEEYAEKAKTLPENTANENKLILYGLYKQATVGPVNTSRPGMFNWKDRAKWDAW 60

Query: 61 KAVEAKSKDDAMSDYITKVKQLQESAAA 89
          KAVE KSK+DAMSDYITKVKQLQE AAA
Sbjct: 61 KAVEGKSKEDAMSDYITKVKQLQEEAAA 88

[Close]

BLAST of Cp4.1LG08g09030 vs. NCBI nr
Match: gi|695020057|ref|XP_009397065.1| (PREDICTED: acyl-CoA-binding protein-like [Musa acuminata subsp. malaccensis])

HSP 1 Score: 159.5 bits (402), Expect = 2.8e-36
Identity = 80/88 (90.91%), Postives = 82/88 (93.18%), Query Frame = 1


Query: 1  MGLKEEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGAVNTSRPGVFYQRDRAKWDAW 60
          MGLKEEFEEYAEKAKTLPENT+NENKLILYGLYKQATVG VNTSRPGVF QRDRAKWDAW
Sbjct: 1  MGLKEEFEEYAEKAKTLPENTTNENKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAW 60

Query: 61 KAVEAKSKDDAMSDYITKVKQLQESAAA 89
           AVE KSK+DAMSDYITKVKQL E AAA
Sbjct: 61 MAVEGKSKEDAMSDYITKVKQLLEEAAA 88

The following BLAST results are available for this feature:

BLAST of Cp4.1LG08g09030 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ACBP_RICCO	1.8e-35	83.15	Acyl-CoA-binding protein OS=Ricinus communis PE=3 SV=1	[more]
ACBP_FRIAG	3.2e-32	78.16	Acyl-CoA-binding protein OS=Fritillaria agrestis GN=ACABP PE=3 SV=1	[more]
ACBP_GOSHI	1.8e-30	73.03	Acyl-CoA-binding protein OS=Gossypium hirsutum PE=3 SV=1	[more]
ACBP_BRANA	2.5e-29	71.91	Acyl-CoA-binding protein OS=Brassica napus PE=3 SV=1	[more]
ACBP6_ARATH	2.8e-28	71.59	Acyl-CoA-binding domain-containing protein 6 OS=Arabidopsis thaliana GN=ACBP6 PE...	[more]

BLAST of Cp4.1LG08g09030 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A059Q2J3_9POAL	3.9e-37	87.64	Acyl-CoA-binding protein OS=Saccharum hybrid cultivar R570 GN=SHCRBa_010_J05_R_2...	[more]
B6UB43_MAIZE	5.1e-37	87.64	Acyl-CoA-binding protein OS=Zea mays PE=2 SV=1	[more]
K9ZUG4_VERFO	1.5e-36	89.77	Acyl-CoA binding protein 6 OS=Vernicia fordii GN=ACBP6 PE=2 SV=1	[more]
B4FER8_MAIZE	1.9e-36	86.52	Acyl-CoA-binding protein OS=Zea mays GN=ZEAMMB73_795592 PE=2 SV=1	[more]
M0SQ12_MUSAM	1.9e-36	90.91	Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1	[more]

BLAST of Cp4.1LG08g09030 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G31812.1	1.6e-29	71.59	acyl-CoA-binding protein 6	[more]
AT5G53470.1	1.5e-08	41.67	acyl-CoA binding protein 1	[more]
AT4G27780.1	2.4e-06	37.68	acyl-CoA binding protein 2	[more]

BLAST of Cp4.1LG08g09030 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|530277863\|gb\|AGT15941.1\|	5.6e-37	87.64	acyl-CoA-binding protein [Saccharum hybrid cultivar R570]	[more]
gi\|195654217\|gb\|ACG46576.1\|	7.3e-37	87.64	acyl-CoA-binding protein [Zea mays]	[more]
gi\|428754000\|gb\|AFZ62125.1\|	2.1e-36	89.77	acyl-CoA binding protein 6 [Vernicia fordii]	[more]
gi\|743862792\|ref\|XP_010943634.1\|	2.8e-36	89.77	PREDICTED: acyl-CoA-binding protein [Elaeis guineensis]	[more]
gi\|695020057\|ref\|XP_009397065.1\|	2.8e-36	90.91	PREDICTED: acyl-CoA-binding protein-like [Musa acuminata subsp. malaccensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0000062	fatty-acyl-CoA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR022408	Acyl-CoA-binding_prot_CS
IPR014352	FERM/acyl-CoA-bd_prot_sf
IPR000582	Acyl-CoA-binding_protein

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006816	calcium ion transport
biological_process	GO:0019344	cysteine biosynthetic process
biological_process	GO:0007030	Golgi organization
biological_process	GO:0006869	lipid transport
biological_process	GO:0010264	myo-inositol hexakisphosphate biosynthetic process
biological_process	GO:0009646	response to absence of light
biological_process	GO:0050826	response to freezing
biological_process	GO:0009651	response to salt stress
biological_process	GO:0008150	biological_process
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0000062	fatty-acyl-CoA binding
molecular_function	GO:0031210	phosphatidylcholine binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG08g09030.1	Cp4.1LG08g09030.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000582	Acyl-CoA-binding protein, ACBP	PRINTS	PR00689	ACOABINDINGP	coord: 21..39 score: 4.3E-26coord: 44..59 score: 4.3E-26coord: 65..82 score: 4.3E-26coord: 4..19 score: 4.3
IPR000582	Acyl-CoA-binding protein, ACBP	PFAM	PF00887	ACBP	coord: 5..82 score: 3.1
IPR000582	Acyl-CoA-binding protein, ACBP	PROFILE	PS51228	ACB_2	coord: 3..88 score: 38
IPR000582	Acyl-CoA-binding protein, ACBP	unknown	SSF47027	Acyl-CoA binding protein	coord: 3..84 score: 6.54
IPR014352	FERM/acyl-CoA-binding protein, 3-helical bundle	GENE3D	G3DSA:1.20.80.10		coord: 3..85 score: 1.2
IPR022408	Acyl-CoA-binding protein, ACBP, conserved site	PROSITE	PS00880	ACB_1	coord: 21..39 scor
None	No IPR available	PANTHER	PTHR23310	ACYL-COA-BINDING PROTEIN, ACBP	coord: 1..84 score: 2.3
None	No IPR available	PANTHER	PTHR23310:SF67	SUBFAMILY NOT NAMED	coord: 1..84 score: 2.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG08g09030	Cucsa.322400	Cucumber (Gy14) v1	cgycpeB0854
Cp4.1LG08g09030	CmaCh16G012220	Cucurbita maxima (Rimu)	cmacpeB363
Cp4.1LG08g09030	CmaCh06G005980	Cucurbita maxima (Rimu)	cmacpeB852
Cp4.1LG08g09030	CmoCh06G006040	Cucurbita moschata (Rifu)	cmocpeB797
Cp4.1LG08g09030	CmoCh16G012650	Cucurbita moschata (Rifu)	cmocpeB327
Cp4.1LG08g09030	Cla008874	Watermelon (97103) v1	cpewmB829
Cp4.1LG08g09030	Csa3G004510	Cucumber (Chinese Long) v2	cpecuB863
Cp4.1LG08g09030	MELO3C013788	Melon (DHL92) v3.5.1	cpemeB808
Cp4.1LG08g09030	ClCG10G000940	Watermelon (Charleston Gray)	cpewcgB772
Cp4.1LG08g09030	CSPI03G00970	Wild cucumber (PI 183967)	cpecpiB865
Cp4.1LG08g09030	MELO3C031937.2	Melon (DHL92) v3.6.1	cpemedB952
Cp4.1LG08g09030	CsaV3_3G001010	Cucumber (Chinese Long) v3	cpecucB1059
Cp4.1LG08g09030	BhiUN179G7	Wax gourd	cpewgoB1137
Cp4.1LG08g09030	CsGy3G000910	Cucumber (Gy14) v2	cgybcpeB456
Cp4.1LG08g09030	Carg16284	Silver-seed gourd	carcpeB0957
Cp4.1LG08g09030	Carg19492	Silver-seed gourd	carcpeB0604

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG08g09030	Cp4.1LG14g10020	Cucurbita pepo (Zucchini)	cpecpeB249

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG08g09030	Bottle gourd (USVL1VR-Ls)	cpelsiB725