Cucsa.322400 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.322400
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Acyl-CoA-binding protein
Location	scaffold03080 : 2161847 .. 2163967 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCGGCGATTTTTTCCCTTTCAATTCCGATCACGTCCGTCGCTCGTCTATTTATAAGAGTTCAATTCTCGTCGTTCTTCTCAGTAGCATTTCGCAACTGTAATCGAGCTTCAAACGTAAGCAACCAAGAAGAATCACCATGGGTTTGAAGGTATATTCCTCTCTCTTCTTTCTTCTCAACTCTCAATTTCTTTAGATTATTACCTTCCAATCCCTCTTTCCCTCTTTTTCTGCAAATTTTTtGTTCGATCAGTACTTGGGTTCTTCGTTTATAGTGACTGATTCGTTACCGAATGATAATAGTTTTAGCTTTTTATTAGTTATGATATTGGAATTAAATTGAGCAATTTCTGCATAGTCGTGCATTGCTAGTATGTTGGATTCGGTAGCCTTCCTTGGAATGCCTTTTGTTGGATTTATCTTTTCGGATCTGTTTTTAATTCTATCTGTGTTGTCATCAGAATGGAGACGTCGAAATCTGGTAGTTTCCAGATCGATAGTCGTGAAAAAACTATGGAGATATGGTGATATTGCTCCTTGTCTATTTTAAAGATTATATTATACAGCTTCGTTCTCTTTCTGTTCATTCTTTTTCCTGGTTTAGTTTGCATGGATGTAATGTGACGACGATAGCTAAAATTAGGTCGGGTCGAAACTTAGATCCGAGATTGGAAATGGCTTCATGATCTTTTCTTTGCAATCTCCGCCACTCTTCCTTTTtCCGGAAAAaGTGGAATGATAAGGCAAAAGTGGTTTTCCAAGGAGAATATACCATTTCATGACTTTGAGTAATGTTTGAGTTAGATCAAGGACACCGGTGACTGTAGTATTTTGCAGTTGTTGGAATGCGGACTCCATTTATTCCTGTTTCTTTTTGTTGTTTCCAAATTGATTGCTTGAACTCGTGCTTGATCACTGGATTTGTTGGATAATATGATATTAAAAATTTGCTTTCACCCATCTGCTTAAACTTTTGGATAGATGGGTAACCGTATTAGAGCCGGTGGTCTCTAGGAGGTTCTATCTTCAAATCTTTGCAATAGCGTTACATGATATGATTTTAAACCTATTCACCCATAAGTACTTTCGGTGATTTAACAAGATTATTACCGTATAACGAAACTGTAGATGTTAGGGTAATAGGTACTGAAAATTCTAAAAACAAGAAATATTTGCTATGTTCTACAGAGATAAAGCTTGTAGTTTGTATCATAACTTAATGAGGCTGAGTTTTGCAGGAGGACTTTGAGGAGTATGCTGAGAAAGCAAAGACCTTGCCAGAGAACACAACCAATGAAAACAAACTCATTCTCTATGGACTATACAAGCAGGCCACTGTTGGACCCGTTACCACTTGTAAGTTCTTTCTTTCACTGAGTGGAATTTCTAAAGAAAATTGTTTATAGTTGGAATTATGTGATCAAATTCTCCAATTTAACTGTTTATTGCATTTATGATCGATTTATAGCCCGACCTGGAATGTTCAGCCAGAAGGAAAGAGCCAAATGGGATGCGTGGAAGGCTGTTGAAGGTAATTATCTGAATATTTAAACACCTGTGAGAATATTTTTGTTTGTTGTTCTTTAGGGGAAAACCTTCATGTCAGTGTTTCTGTATTTGGGGAGCTTTGGGTTGTGAAATTGAGAATATATATTGATGAATTCAGCACTATGAAATGGATCTTTTCTATTTTTTTATGACATTAAGGGGCATTTGGTTTAACTAACTTTTAGAGTGGAAAACTTTTTAAGTAAAATATACTTTTTTCTCAGATTAATTCAATAAGACACTAAAATATGTTTAATCTTTACTGGGAATGAACTCTTCTTTAAGTTTTACCCAATTCTAAAATGTACAAGAATGAGCTAAAATTGAAGAGAATCAAATATTTTCTTTGCAGCAAAATCCAAGGAAGATGCAATGAATGACTACATCACCAAGGTGAAACAATTGCAAGAGGCAGCTGCTGCTAGCTGATGAGTTTCTTGATTACCTGTATGAACAATGATGTTGAAATAATCCTTGTTTTAAGTTCAGTACTTTAATCGTATTTATCTAAGTTGTGTAACAATGAACTATGTGCAAGTATTATCAGTCATATTTAGCAAATGCGTCTTCAACCC

mRNA sequence

TCGGCGATTTTTTCCCTTTCAATTCCGATCACGTCCGTCGCTCGTCTATTTATAAGAGTTCAATTCTCGTCGTTCTTCTCAGTAGCATTTCGCAACTGTAATCGAGCTTCAAACGTAAGCAACCAAGAAGAATCACCATGGGTTTGAAGGAGGACTTTGAGGAGTATGCTGAGAAAGCAAAGACCTTGCCAGAGAACACAACCAATGAAAACAAACTCATTCTCTATGGACTATACAAGCAGGCCACTGTTGGACCCGTTACCACTTCCCGACCTGGAATGTTCAGCCAGAAGGAAAGAGCCAAATGGGATGCGTGGAAGGCTGTTGAAGCAAAATCCAAGGAAGATGCAATGAATGACTACATCACCAAGGTGAAACAATTGCAAGAGGCAGCTGCTGCTAGCTGATGAGTTTCTTGATTACCTGTATGAACAATGATGTTGAAATAATCCTTGTTTTAAGTTCAGTACTTTAATCGTATTTATCTAAGTTGTGTAACAATGAACTATGTGCAAGTATTATCAGTCATATTTAGCAAATGCGTCTTCAACCC

Coding sequence (CDS)

ATGGGTTTGAAGGAGGACTTTGAGGAGTATGCTGAGAAAGCAAAGACCTTGCCAGAGAACACAACCAATGAAAACAAACTCATTCTCTATGGACTATACAAGCAGGCCACTGTTGGACCCGTTACCACTTCCCGACCTGGAATGTTCAGCCAGAAGGAAAGAGCCAAATGGGATGCGTGGAAGGCTGTTGAAGCAAAATCCAAGGAAGATGCAATGAATGACTACATCACCAAGGTGAAACAATTGCAAGAGGCAGCTGCTGCTAGCTGA

Protein sequence

MGLKEDFEEYAEKAKTLPENTTNENKLILYGLYKQATVGPVTTSRPGMFSQKERAKWDAWKAVEAKSKEDAMNDYITKVKQLQEAAAAS*

Homology

[Close]

BLAST of Cucsa.322400 vs. Swiss-Prot
Match: ACBP_RICCO (Acyl-CoA-binding protein OS=Ricinus communis PE=3 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 1.1e-37
Identity = 76/89 (85.39%), Postives = 82/89 (92.13%), Query Frame = 1


Query: 1  MGLKEDFEEYAEKAKTLPENTTNENKLILYGLYKQATVGPVTTSRPGMFSQKERAKWDAW 60
          MGLKEDFEE+AEKAKTLPENTTNENKLILYGLYKQATVGPV TSRPGMF+ ++RAKWDAW
Sbjct: 1  MGLKEDFEEHAEKAKTLPENTTNENKLILYGLYKQATVGPVNTSRPGMFNMRDRAKWDAW 60

Query: 61 KAVEAKSKEDAMNDYITKVKQLQEAAAAS 90
          KAVE KS E+AM+DYITKVKQL   AAAS
Sbjct: 61 KAVEGKSTEEAMSDYITKVKQLLGEAAAS 89

[Close]

BLAST of Cucsa.322400 vs. Swiss-Prot
Match: ACBP_FRIAG (Acyl-CoA-binding protein OS=Fritillaria agrestis GN=ACABP PE=3 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 2.0e-34
Identity = 70/87 (80.46%), Postives = 78/87 (89.66%), Query Frame = 1


Query: 1  MGLKEDFEEYAEKAKTLPENTTNENKLILYGLYKQATVGPVTTSRPGMFSQKERAKWDAW 60
          M LKE+FEE+A KAKTLPE+T+NENKLILYGLYKQ+TVGPV T RPGMFS +ERAKWDAW
Sbjct: 1  MALKEEFEEHAVKAKTLPESTSNENKLILYGLYKQSTVGPVDTGRPGMFSPRERAKWDAW 60

Query: 61 KAVEAKSKEDAMNDYITKVKQLQEAAA 88
          KAVE KSKE+AM DYITKVKQL E +A
Sbjct: 61 KAVEGKSKEEAMGDYITKVKQLLEESA 87

[Close]

BLAST of Cucsa.322400 vs. Swiss-Prot
Match: ACBP_BRANA (Acyl-CoA-binding protein OS=Brassica napus PE=3 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 1.7e-33
Identity = 70/89 (78.65%), Postives = 78/89 (87.64%), Query Frame = 1


Query: 1  MGLKEDFEEYAEKAKTLPENTTNENKLILYGLYKQATVGPVTTSRPGMFSQKERAKWDAW 60
          MGLKEDFEE+AEK K L  + +NE+ LILYGLYKQATVGPVTTSRPGMFS KERAKWDAW
Sbjct: 1  MGLKEDFEEHAEKVKKLTASPSNEDLLILYGLYKQATVGPVTTSRPGMFSMKERAKWDAW 60

Query: 61 KAVEAKSKEDAMNDYITKVKQLQEAAAAS 90
          KAVE KS ++AM+DYITKVKQL EA A+S
Sbjct: 61 KAVEGKSTDEAMSDYITKVKQLLEAEASS 89

[Close]

BLAST of Cucsa.322400 vs. Swiss-Prot
Match: ACBP_GOSHI (Acyl-CoA-binding protein OS=Gossypium hirsutum PE=3 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 1.1e-32
Identity = 67/89 (75.28%), Postives = 77/89 (86.52%), Query Frame = 1


Query: 1  MGLKEDFEEYAEKAKTLPENTTNENKLILYGLYKQATVGPVTTSRPGMFSQKERAKWDAW 60
          MGLKE+FEE+AEK KTLP   +N++ LILYGLYKQATVGPV TSRPGMF+ +E+ KWDAW
Sbjct: 1  MGLKEEFEEHAEKVKTLPAAPSNDDMLILYGLYKQATVGPVNTSRPGMFNMREKYKWDAW 60

Query: 61 KAVEAKSKEDAMNDYITKVKQLQEAAAAS 90
          KAVE KSKE+AM DYITKVKQL EAA +S
Sbjct: 61 KAVEGKSKEEAMGDYITKVKQLFEAAGSS 89

[Close]

BLAST of Cucsa.322400 vs. Swiss-Prot
Match: ACBP6_ARATH (Acyl-CoA-binding domain-containing protein 6 OS=Arabidopsis thaliana GN=ACBP6 PE=1 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 4.2e-32
Identity = 68/88 (77.27%), Postives = 74/88 (84.09%), Query Frame = 1


Query: 1  MGLKEDFEEYAEKAKTLPENTTNENKLILYGLYKQATVGPVTTSRPGMFSQKERAKWDAW 60
          MGLKE+FEE+AEK  TL E  +NE+ LILYGLYKQA  GPV TSRPGMFS KERAKWDAW
Sbjct: 1  MGLKEEFEEHAEKVNTLTELPSNEDLLILYGLYKQAKFGPVDTSRPGMFSMKERAKWDAW 60

Query: 61 KAVEAKSKEDAMNDYITKVKQLQEAAAA 89
          KAVE KS E+AMNDYITKVKQL E AA+
Sbjct: 61 KAVEGKSSEEAMNDYITKVKQLLEVAAS 88

[Close]

BLAST of Cucsa.322400 vs. TrEMBL
Match: A0A0A0L140_CUCSA (Acyl-CoA-binding protein OS=Cucumis sativus GN=Csa_3G004510 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 3.1e-42
Identity = 88/89 (98.88%), Postives = 89/89 (100.00%), Query Frame = 1


Query: 1  MGLKEDFEEYAEKAKTLPENTTNENKLILYGLYKQATVGPVTTSRPGMFSQKERAKWDAW 60
          MGLKEDFEEYAEKAKTLPE+TTNENKLILYGLYKQATVGPVTTSRPGMFSQKERAKWDAW
Sbjct: 1  MGLKEDFEEYAEKAKTLPESTTNENKLILYGLYKQATVGPVTTSRPGMFSQKERAKWDAW 60

Query: 61 KAVEAKSKEDAMNDYITKVKQLQEAAAAS 90
          KAVEAKSKEDAMNDYITKVKQLQEAAAAS
Sbjct: 61 KAVEAKSKEDAMNDYITKVKQLQEAAAAS 89

[Close]

BLAST of Cucsa.322400 vs. TrEMBL
Match: A0A0B0NLB6_GOSAR (Acyl-CoA-binding OS=Gossypium arboreum GN=F383_04422 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 6.1e-38
Identity = 79/89 (88.76%), Postives = 85/89 (95.51%), Query Frame = 1


Query: 1  MGLKEDFEEYAEKAKTLPENTTNENKLILYGLYKQATVGPVTTSRPGMFSQKERAKWDAW 60
          MGLKE+FEEYAEKAKTLPENTTN++KLILYGLYKQATVGPV TSRPGMF+ KE+ KWDAW
Sbjct: 1  MGLKEEFEEYAEKAKTLPENTTNDDKLILYGLYKQATVGPVNTSRPGMFNMKEKYKWDAW 60

Query: 61 KAVEAKSKEDAMNDYITKVKQLQEAAAAS 90
          KAVE KSKE+AMNDYITKVKQLQEAAAAS
Sbjct: 61 KAVEGKSKEEAMNDYITKVKQLQEAAAAS 89

[Close]

BLAST of Cucsa.322400 vs. TrEMBL
Match: A0A0D2SPR6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G349800 PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 1.8e-37
Identity = 78/89 (87.64%), Postives = 85/89 (95.51%), Query Frame = 1


Query: 1  MGLKEDFEEYAEKAKTLPENTTNENKLILYGLYKQATVGPVTTSRPGMFSQKERAKWDAW 60
          MGLKE+FEEYAEKAKTLPENTTN++KLILYGL+KQATVGPV TSRPGMF+ KE+ KWDAW
Sbjct: 1  MGLKEEFEEYAEKAKTLPENTTNDDKLILYGLFKQATVGPVNTSRPGMFNMKEKYKWDAW 60

Query: 61 KAVEAKSKEDAMNDYITKVKQLQEAAAAS 90
          KAVE KSKE+AMNDYITKVKQLQEAAAAS
Sbjct: 61 KAVEGKSKEEAMNDYITKVKQLQEAAAAS 89

[Close]

BLAST of Cucsa.322400 vs. TrEMBL
Match: K9ZUG4_VERFO (Acyl-CoA binding protein 6 OS=Vernicia fordii GN=ACBP6 PE=2 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 5.2e-37
Identity = 77/89 (86.52%), Postives = 85/89 (95.51%), Query Frame = 1


Query: 1  MGLKEDFEEYAEKAKTLPENTTNENKLILYGLYKQATVGPVTTSRPGMFSQKERAKWDAW 60
          MGLKE+FEEYAEKAKTLPENTTNENKLILYGLYKQATVGPV TSRPG+F+Q++RAKWDAW
Sbjct: 1  MGLKEEFEEYAEKAKTLPENTTNENKLILYGLYKQATVGPVNTSRPGIFNQRDRAKWDAW 60

Query: 61 KAVEAKSKEDAMNDYITKVKQLQEAAAAS 90
          KAVE KSKE+AM+DYITKVKQL E AAA+
Sbjct: 61 KAVEGKSKEEAMSDYITKVKQLLEEAAAA 89

[Close]

BLAST of Cucsa.322400 vs. TrEMBL
Match: M0SQ12_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 8.8e-37
Identity = 77/89 (86.52%), Postives = 84/89 (94.38%), Query Frame = 1


Query: 1  MGLKEDFEEYAEKAKTLPENTTNENKLILYGLYKQATVGPVTTSRPGMFSQKERAKWDAW 60
          MGLKE+FEEYAEKAKTLPENTTNENKLILYGLYKQATVGPV TSRPG+F+Q++RAKWDAW
Sbjct: 1  MGLKEEFEEYAEKAKTLPENTTNENKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAW 60

Query: 61 KAVEAKSKEDAMNDYITKVKQLQEAAAAS 90
           AVE KSKEDAM+DYITKVKQL E AAA+
Sbjct: 61 MAVEGKSKEDAMSDYITKVKQLLEEAAAA 89

[Close]

BLAST of Cucsa.322400 vs. TAIR10
Match: AT1G31812.1 (AT1G31812.1 acyl-CoA-binding protein 6)

HSP 1 Score: 138.3 bits (347), Expect = 2.4e-33
Identity = 68/88 (77.27%), Postives = 74/88 (84.09%), Query Frame = 1


Query: 1  MGLKEDFEEYAEKAKTLPENTTNENKLILYGLYKQATVGPVTTSRPGMFSQKERAKWDAW 60
          MGLKE+FEE+AEK  TL E  +NE+ LILYGLYKQA  GPV TSRPGMFS KERAKWDAW
Sbjct: 1  MGLKEEFEEHAEKVNTLTELPSNEDLLILYGLYKQAKFGPVDTSRPGMFSMKERAKWDAW 60

Query: 61 KAVEAKSKEDAMNDYITKVKQLQEAAAA 89
          KAVE KS E+AMNDYITKVKQL E AA+
Sbjct: 61 KAVEGKSSEEAMNDYITKVKQLLEVAAS 88

[Close]

BLAST of Cucsa.322400 vs. TAIR10
Match: AT5G53470.1 (AT5G53470.1 acyl-CoA binding protein 1)

HSP 1 Score: 63.2 bits (152), Expect = 9.7e-11
Identity = 33/75 (44.00%), Postives = 41/75 (54.67%), Query Frame = 1


Query: 11  AEKAKTLPENTTNENKLILYGLYKQATVGPVTTSRPGMFSQKERAKWDAWKAVEAKSKED 70
           A  +  L +  +NE +L LYGLYK AT GP T  +P       RAKW AW+ + A   E+
Sbjct: 107 AAASDRLSQKVSNELQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWQKLGAMPPEE 166

Query: 71  AMNDYITKVKQLQEA 86
           AM  YI  V QL  A
Sbjct: 167 AMEKYIDLVTQLYPA 181

[Close]

BLAST of Cucsa.322400 vs. TAIR10
Match: AT4G27780.1 (AT4G27780.1 acyl-CoA binding protein 2)

HSP 1 Score: 56.2 bits (134), Expect = 1.2e-08
Identity = 29/69 (42.03%), Postives = 37/69 (53.62%), Query Frame = 1


Query: 14  AKTLPENTTNENKLILYGLYKQATVGPVTTSRPGMFSQKERAKWDAWKAVEAKSKEDAMN 73
           A  L +   ++ +  LYGLYK AT GP T  +P       RAKW AW+ + A   E+AM 
Sbjct: 120 ADRLSQKVPSDVQQQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWQKLGAMPPEEAME 179

Query: 74  DYITKVKQL 83
            YI  V QL
Sbjct: 180 KYIEIVTQL 188

[Close]

BLAST of Cucsa.322400 vs. TAIR10
Match: AT3G05420.2 (AT3G05420.2 acyl-CoA binding protein 4)

HSP 1 Score: 49.3 bits (116), Expect = 1.5e-06
Identity = 21/63 (33.33%), Postives = 36/63 (57.14%), Query Frame = 1


Query: 14 AKTLPENTTNENKLILYGLYKQATVGPVTTSRPGMFSQKERAKWDAWKAVEAKSKEDAMN 73
          AK +     ++  L+LY LY+QATVGP  T +P  +   E++KW +W+ +      +AM 
Sbjct: 32 AKNVISKFPDDTALLLYALYQQATVGPCNTPKPSAWRPVEQSKWKSWQGLGTMPSIEAMR 91

Query: 74 DYI 77
           ++
Sbjct: 92 LFV 94

[Close]

BLAST of Cucsa.322400 vs. TAIR10
Match: AT5G27630.1 (AT5G27630.1 acyl-CoA binding protein 5)

HSP 1 Score: 48.9 bits (115), Expect = 1.9e-06
Identity = 24/71 (33.80%), Postives = 42/71 (59.15%), Query Frame = 1


Query: 15  KTLPENTTNENKLILYGLYKQATVGPVTTSRPGMFSQKERAKWDAWKAVEAKSKEDAMND 74
           K L    +N+  L+LY L++QAT+GP +  +P  ++  E++KW +W+ +      +AM  
Sbjct: 34  KQLSSKFSNDTSLLLYTLHQQATLGPCSIPKPSAWNPVEQSKWKSWQGLGTMPSIEAMRL 93

Query: 75  YITKVKQLQEA 86
           +   VK L+EA
Sbjct: 94  F---VKILEEA 101

[Close]

BLAST of Cucsa.322400 vs. NCBI nr
Match: gi|449456781|ref|XP_004146127.1| (PREDICTED: acyl-CoA-binding protein [Cucumis sativus])

HSP 1 Score: 178.7 bits (452), Expect = 4.5e-42
Identity = 88/89 (98.88%), Postives = 89/89 (100.00%), Query Frame = 1


Query: 1  MGLKEDFEEYAEKAKTLPENTTNENKLILYGLYKQATVGPVTTSRPGMFSQKERAKWDAW 60
          MGLKEDFEEYAEKAKTLPE+TTNENKLILYGLYKQATVGPVTTSRPGMFSQKERAKWDAW
Sbjct: 1  MGLKEDFEEYAEKAKTLPESTTNENKLILYGLYKQATVGPVTTSRPGMFSQKERAKWDAW 60

Query: 61 KAVEAKSKEDAMNDYITKVKQLQEAAAAS 90
          KAVEAKSKEDAMNDYITKVKQLQEAAAAS
Sbjct: 61 KAVEAKSKEDAMNDYITKVKQLQEAAAAS 89

[Close]

BLAST of Cucsa.322400 vs. NCBI nr
Match: gi|659095442|ref|XP_008448583.1| (PREDICTED: acyl-CoA-binding protein [Cucumis melo])

HSP 1 Score: 177.9 bits (450), Expect = 7.7e-42
Identity = 87/89 (97.75%), Postives = 89/89 (100.00%), Query Frame = 1


Query: 1  MGLKEDFEEYAEKAKTLPENTTNENKLILYGLYKQATVGPVTTSRPGMFSQKERAKWDAW 60
          MGLKEDFEEYAEKAKTLPENT+NENKLILYGLYKQATVGPVTTSRPGMF+QKERAKWDAW
Sbjct: 1  MGLKEDFEEYAEKAKTLPENTSNENKLILYGLYKQATVGPVTTSRPGMFNQKERAKWDAW 60

Query: 61 KAVEAKSKEDAMNDYITKVKQLQEAAAAS 90
          KAVEAKSKEDAMNDYITKVKQLQEAAAAS
Sbjct: 61 KAVEAKSKEDAMNDYITKVKQLQEAAAAS 89

[Close]

BLAST of Cucsa.322400 vs. NCBI nr
Match: gi|728833171|gb|KHG12614.1| (Acyl-CoA-binding [Gossypium arboreum])

HSP 1 Score: 164.5 bits (415), Expect = 8.8e-38
Identity = 79/89 (88.76%), Postives = 85/89 (95.51%), Query Frame = 1


Query: 1  MGLKEDFEEYAEKAKTLPENTTNENKLILYGLYKQATVGPVTTSRPGMFSQKERAKWDAW 60
          MGLKE+FEEYAEKAKTLPENTTN++KLILYGLYKQATVGPV TSRPGMF+ KE+ KWDAW
Sbjct: 1  MGLKEEFEEYAEKAKTLPENTTNDDKLILYGLYKQATVGPVNTSRPGMFNMKEKYKWDAW 60

Query: 61 KAVEAKSKEDAMNDYITKVKQLQEAAAAS 90
          KAVE KSKE+AMNDYITKVKQLQEAAAAS
Sbjct: 61 KAVEGKSKEEAMNDYITKVKQLQEAAAAS 89

[Close]

BLAST of Cucsa.322400 vs. NCBI nr
Match: gi|743862792|ref|XP_010943634.1| (PREDICTED: acyl-CoA-binding protein [Elaeis guineensis])

HSP 1 Score: 163.7 bits (413), Expect = 1.5e-37
Identity = 79/89 (88.76%), Postives = 84/89 (94.38%), Query Frame = 1


Query: 1  MGLKEDFEEYAEKAKTLPENTTNENKLILYGLYKQATVGPVTTSRPGMFSQKERAKWDAW 60
          MGLKE+FEEYAEKAKTLPENT NENKLILYGLYKQATVGPV TSRPGMF+ K+RAKWDAW
Sbjct: 1  MGLKEEFEEYAEKAKTLPENTANENKLILYGLYKQATVGPVNTSRPGMFNWKDRAKWDAW 60

Query: 61 KAVEAKSKEDAMNDYITKVKQLQEAAAAS 90
          KAVE KSKEDAM+DYITKVKQLQE AAA+
Sbjct: 61 KAVEGKSKEDAMSDYITKVKQLQEEAAAA 89

[Close]

BLAST of Cucsa.322400 vs. NCBI nr
Match: gi|823199218|ref|XP_012434840.1| (PREDICTED: acyl-CoA-binding protein-like isoform X1 [Gossypium raimondii])

HSP 1 Score: 162.9 bits (411), Expect = 2.6e-37
Identity = 78/89 (87.64%), Postives = 85/89 (95.51%), Query Frame = 1


Query: 1  MGLKEDFEEYAEKAKTLPENTTNENKLILYGLYKQATVGPVTTSRPGMFSQKERAKWDAW 60
          MGLKE+FEEYAEKAKTLPENTTN++KLILYGL+KQATVGPV TSRPGMF+ KE+ KWDAW
Sbjct: 1  MGLKEEFEEYAEKAKTLPENTTNDDKLILYGLFKQATVGPVNTSRPGMFNMKEKYKWDAW 60

Query: 61 KAVEAKSKEDAMNDYITKVKQLQEAAAAS 90
          KAVE KSKE+AMNDYITKVKQLQEAAAAS
Sbjct: 61 KAVEGKSKEEAMNDYITKVKQLQEAAAAS 89

The following BLAST results are available for this feature:

BLAST of Cucsa.322400 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ACBP_RICCO	1.1e-37	85.39	Acyl-CoA-binding protein OS=Ricinus communis PE=3 SV=1	[more]
ACBP_FRIAG	2.0e-34	80.46	Acyl-CoA-binding protein OS=Fritillaria agrestis GN=ACABP PE=3 SV=1	[more]
ACBP_BRANA	1.7e-33	78.65	Acyl-CoA-binding protein OS=Brassica napus PE=3 SV=1	[more]
ACBP_GOSHI	1.1e-32	75.28	Acyl-CoA-binding protein OS=Gossypium hirsutum PE=3 SV=1	[more]
ACBP6_ARATH	4.2e-32	77.27	Acyl-CoA-binding domain-containing protein 6 OS=Arabidopsis thaliana GN=ACBP6 PE...	[more]

BLAST of Cucsa.322400 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L140_CUCSA	3.1e-42	98.88	Acyl-CoA-binding protein OS=Cucumis sativus GN=Csa_3G004510 PE=4 SV=1	[more]
A0A0B0NLB6_GOSAR	6.1e-38	88.76	Acyl-CoA-binding OS=Gossypium arboreum GN=F383_04422 PE=4 SV=1	[more]
A0A0D2SPR6_GOSRA	1.8e-37	87.64	Uncharacterized protein OS=Gossypium raimondii GN=B456_007G349800 PE=4 SV=1	[more]
K9ZUG4_VERFO	5.2e-37	86.52	Acyl-CoA binding protein 6 OS=Vernicia fordii GN=ACBP6 PE=2 SV=1	[more]
M0SQ12_MUSAM	8.8e-37	86.52	Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1	[more]

BLAST of Cucsa.322400 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G31812.1	2.4e-33	77.27	acyl-CoA-binding protein 6	[more]
AT5G53470.1	9.7e-11	44.00	acyl-CoA binding protein 1	[more]
AT4G27780.1	1.2e-08	42.03	acyl-CoA binding protein 2	[more]
AT3G05420.2	1.5e-06	33.33	acyl-CoA binding protein 4	[more]
AT5G27630.1	1.9e-06	33.80	acyl-CoA binding protein 5	[more]

BLAST of Cucsa.322400 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449456781\|ref\|XP_004146127.1\|	4.5e-42	98.88	PREDICTED: acyl-CoA-binding protein [Cucumis sativus]	[more]
gi\|659095442\|ref\|XP_008448583.1\|	7.7e-42	97.75	PREDICTED: acyl-CoA-binding protein [Cucumis melo]	[more]
gi\|728833171\|gb\|KHG12614.1\|	8.8e-38	88.76	Acyl-CoA-binding [Gossypium arboreum]	[more]
gi\|743862792\|ref\|XP_010943634.1\|	1.5e-37	88.76	PREDICTED: acyl-CoA-binding protein [Elaeis guineensis]	[more]
gi\|823199218\|ref\|XP_012434840.1\|	2.6e-37	87.64	PREDICTED: acyl-CoA-binding protein-like isoform X1 [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000582	Acyl-CoA-binding_protein
IPR014352	FERM/acyl-CoA-bd_prot_sf
IPR022408	Acyl-CoA-binding_prot_CS

Vocabulary: **Molecular Function**
Term	Definition
GO:0000062	fatty-acyl-CoA binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006816	calcium ion transport
biological_process	GO:0019344	cysteine biosynthetic process
biological_process	GO:0007030	Golgi organization
biological_process	GO:0006869	lipid transport
biological_process	GO:0010264	myo-inositol hexakisphosphate biosynthetic process
biological_process	GO:0009646	response to absence of light
biological_process	GO:0050826	response to freezing
biological_process	GO:0009651	response to salt stress
biological_process	GO:0008150	biological_process
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0000062	fatty-acyl-CoA binding
molecular_function	GO:0031210	phosphatidylcholine binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.322400.1	Cucsa.322400.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000582	Acyl-CoA-binding protein, ACBP	PRINTS	PR00689	ACOABINDINGP	coord: 21..39 score: 3.8E-27coord: 44..59 score: 3.8E-27coord: 4..19 score: 3.8E-27coord: 65..82 score: 3.8
IPR000582	Acyl-CoA-binding protein, ACBP	PFAM	PF00887	ACBP	coord: 5..82 score: 1.3
IPR000582	Acyl-CoA-binding protein, ACBP	PROFILE	PS51228	ACB_2	coord: 3..88 score: 4
IPR000582	Acyl-CoA-binding protein, ACBP	unknown	SSF47027	Acyl-CoA binding protein	coord: 3..83 score: 1.28
IPR014352	FERM/acyl-CoA-binding protein, 3-helical bundle	GENE3D	G3DSA:1.20.80.10		coord: 3..85 score: 1.1
IPR022408	Acyl-CoA-binding protein, ACBP, conserved site	PROSITE	PS00880	ACB_1	coord: 21..39 scor
None	No IPR available	unknown	Coil	Coil	coord: 65..85 scor
None	No IPR available	PANTHER	PTHR23310	ACYL-COA-BINDING PROTEIN, ACBP	coord: 1..84 score: 3.9
None	No IPR available	PANTHER	PTHR23310:SF67	SUBFAMILY NOT NAMED	coord: 1..84 score: 3.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.322400	Cla008874	Watermelon (97103) v1	cgywmB583
Cucsa.322400	Csa3G004510	Cucumber (Chinese Long) v2	cgycuB458
Cucsa.322400	MELO3C013788	Melon (DHL92) v3.5.1	cgymeB532
Cucsa.322400	ClCG10G000940	Watermelon (Charleston Gray)	cgywcgB556
Cucsa.322400	CSPI03G00970	Wild cucumber (PI 183967)	cgycpiB484
Cucsa.322400	CmaCh16G012220	Cucurbita maxima (Rimu)	cgycmaB0887
Cucsa.322400	CmaCh06G005980	Cucurbita maxima (Rimu)	cgycmaB0899
Cucsa.322400	CmoCh16G012650	Cucurbita moschata (Rifu)	cgycmoB0885
Cucsa.322400	CmoCh06G006040	Cucurbita moschata (Rifu)	cgycmoB0896
Cucsa.322400	Cp4.1LG08g09030	Cucurbita pepo (Zucchini)	cgycpeB0854
Cucsa.322400	Cp4.1LG14g10020	Cucurbita pepo (Zucchini)	cgycpeB0845
Cucsa.322400	MELO3C031937.2	Melon (DHL92) v3.6.1	cgymedB533
Cucsa.322400	CsaV3_3G001010	Cucumber (Chinese Long) v3	cgycucB499
Cucsa.322400	Cla97C10G185550	Watermelon (97103) v2	cgywmbB562
Cucsa.322400	BhiUN179G7	Wax gourd	cgywgoB655
Cucsa.322400	Carg16284	Silver-seed gourd	carcgyB0759
Cucsa.322400	Carg19492	Silver-seed gourd	carcgyB0496

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.322400	Bottle gourd (USVL1VR-Ls)	cgylsiB530