CmoCh16G012650 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh16G012650
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Acyl-CoA-binding family protein
Location	Cmo_Chr16 : 9015366 .. 9016819 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTATTCCTTCTGTTCCACTCACCTCCATGTATTTAAAAGCTCCACACTCGTCGTCCTCCCCAGTTAGTATTTCGTTTCTGTATTGAGCTTCGAGTCGCCATGGGTTTGAAGGTAGGTTTCTCTCTCATTCTTCTTCTGAATTCTCAGTTTCTTTACGTTATTAGCTTCGAAGCTCTCAATCCTTCTCTTTATGCCATTTTCTTGTTCGACCAGTAGTTGAATTCTTCGTTTAGAATGGGTGATTTGATGCCGAATGATTATGCTTTAGCTTTTCATTGGTGATGATCTTGGCATTGAGTTAGGGTATTAGTGCAGATCGCTGCATGTCTCTTGTTTTGCGTCGTAGTTATGCATTCATAATATGTTAGATTTGTTGGACTTCGTTAGAATGATTTCTGTTGGATCTGTCTTTTCAGATCTGTGTTTTTTAGAGTCGATCTGTGTTTGCCTTTCGAAGAATGAACGACATCTGGTCGTTCCGGATCGAGAGATGTTAATCTTTTGGTTGTTTCCAAATTGATTGCTTGACTCTAGATATTTAGGGCAATAGGTGCAGAGAATTGTAAGAACTTCATATATTTGTTCTGTTATATTGAACTAAAAGCACGCAGTCTGTATCACAACTTGATGAGGCTGAGTTCTGCAGGAGGAGTTTGAGGAGTATGCTGAGAAGGCAAAGACCTTGCCGGAGAACACAAGCAATGAAAACAAACTCATTCTCTATGGACTATACAAGCAGGCCACTGTTGGACCCGTGAACACTAGTAAGTACTGTCTTTCATTGAATATAATTTCTAAAGAAAATTTGTGTATAGATGGAATTATGTGATCAAATTCTCCAATGTAACCGTTTATTGCAACTATGATTGATTTGTAGGCCGACCTGGAGTGTTCAACCAGAGAGACAGAGCCAAATGGGATGCCTGGAAGGCTGTTGAAGGTATGTTTTCTCAGAATTCAACACTATGAAATGGATTTTCTCTATTTTGCGATGACATTGAAATATGTTTACTCTTTTTTGCCATGAACTCTATTAGATTAAAGATTTGTAAAAAATGTACAACAATGAGCTTGATTGAAGAGAATTAAATGTTTTTGCAGCAAAATCCAAGGATGATGCAATGAGCGACTACATCACGAAGGTGAAACAGTTACAAGAGGCAGCTGCTGCTAACTGATAAGTTTCTCGATTATCTGTATGAACAATGATGTTGAAATAATCCTTGTTTAAGTTCAGTACTTTTACCATATTTATCTACATTGTGTAACAATGAACTACACAATGAACTATGTGCAAGTATTATTACTATTGGATTTCGCTAATGAATCTTCAACCTTTTAACCAAATTAATATACTTGGGCTTGTTAATTGCTTTTTTCTTTTTTTCCACTTAAAAGCAGTATTCAAGCTGATAAGTGTCGACGGTGTCAACAGGATTTAGAAAGCTAGAG

mRNA sequence

ATTTATTCCTTCTGTTCCACTCACCTCCATGTATTTAAAAGCTCCACACTCGTCGTCCTCCCCAGTTAGTATTTCGTTTCTGTATTGAGCTTCGAGTCGCCATGGGTTTGAAGGAGGAGTTTGAGGAGTATGCTGAGAAGGCAAAGACCTTGCCGGAGAACACAAGCAATGAAAACAAACTCATTCTCTATGGACTATACAAGCAGGCCACTGTTGGACCCGTGAACACTAGCCGACCTGGAGTGTTCAACCAGAGAGACAGAGCCAAATGGGATGCCTGGAAGGCTGTTGAAGCAAAATCCAAGGATGATGCAATGAGCGACTACATCACGAAGGTGAAACAGTTACAAGAGGCAGCTGCTGCTAACTGATAAGTTTCTCGATTATCTGTATGAACAATGATGTTGAAATAATCCTTGTTTAAGTTCAGTACTTTTACCATATTTATCTACATTGTGTAACAATGAACTACACAATGAACTATGTGCAAGTATTATTACTATTGGATTTCGCTAATGAATCTTCAACCTTTTAACCAAATTAATATACTTGGGCTTGTTAATTGCTTTTTTCTTTTTTTCCACTTAAAAGCAGTATTCAAGCTGATAAGTGTCGACGGTGTCAACAGGATTTAGAAAGCTAGAG

Coding sequence (CDS)

ATGGGTTTGAAGGAGGAGTTTGAGGAGTATGCTGAGAAGGCAAAGACCTTGCCGGAGAACACAAGCAATGAAAACAAACTCATTCTCTATGGACTATACAAGCAGGCCACTGTTGGACCCGTGAACACTAGCCGACCTGGAGTGTTCAACCAGAGAGACAGAGCCAAATGGGATGCCTGGAAGGCTGTTGAAGCAAAATCCAAGGATGATGCAATGAGCGACTACATCACGAAGGTGAAACAGTTACAAGAGGCAGCTGCTGCTAACTGA

Homology

[Close]

BLAST of CmoCh16G012650 vs. Swiss-Prot
Match: ACBP_RICCO (Acyl-CoA-binding protein OS=Ricinus communis PE=3 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 3.3e-37
Identity = 76/89 (85.39%), Postives = 83/89 (93.26%), Query Frame = 1


Query: 1  MGLKEEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAW 60
          MGLKE+FEE+AEKAKTLPENT+NENKLILYGLYKQATVGPVNTSRPG+FN RDRAKWDAW
Sbjct: 1  MGLKEDFEEHAEKAKTLPENTTNENKLILYGLYKQATVGPVNTSRPGMFNMRDRAKWDAW 60

Query: 61 KAVEAKSKDDAMSDYITKVKQLQEAAAAN 90
          KAVE KS ++AMSDYITKVKQL   AAA+
Sbjct: 61 KAVEGKSTEEAMSDYITKVKQLLGEAAAS 89

[Close]

BLAST of CmoCh16G012650 vs. Swiss-Prot
Match: ACBP_FRIAG (Acyl-CoA-binding protein OS=Fritillaria agrestis GN=ACABP PE=3 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 1.7e-33
Identity = 69/87 (79.31%), Postives = 79/87 (90.80%), Query Frame = 1


Query: 1  MGLKEEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAW 60
          M LKEEFEE+A KAKTLPE+TSNENKLILYGLYKQ+TVGPV+T RPG+F+ R+RAKWDAW
Sbjct: 1  MALKEEFEEHAVKAKTLPESTSNENKLILYGLYKQSTVGPVDTGRPGMFSPRERAKWDAW 60

Query: 61 KAVEAKSKDDAMSDYITKVKQLQEAAA 88
          KAVE KSK++AM DYITKVKQL E +A
Sbjct: 61 KAVEGKSKEEAMGDYITKVKQLLEESA 87

[Close]

BLAST of CmoCh16G012650 vs. Swiss-Prot
Match: ACBP_GOSHI (Acyl-CoA-binding protein OS=Gossypium hirsutum PE=3 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 1.1e-32
Identity = 68/89 (76.40%), Postives = 78/89 (87.64%), Query Frame = 1


Query: 1  MGLKEEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAW 60
          MGLKEEFEE+AEK KTLP   SN++ LILYGLYKQATVGPVNTSRPG+FN R++ KWDAW
Sbjct: 1  MGLKEEFEEHAEKVKTLPAAPSNDDMLILYGLYKQATVGPVNTSRPGMFNMREKYKWDAW 60

Query: 61 KAVEAKSKDDAMSDYITKVKQLQEAAAAN 90
          KAVE KSK++AM DYITKVKQL EAA ++
Sbjct: 61 KAVEGKSKEEAMGDYITKVKQLFEAAGSS 89

[Close]

BLAST of CmoCh16G012650 vs. Swiss-Prot
Match: ACBP_BRANA (Acyl-CoA-binding protein OS=Brassica napus PE=3 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 6.0e-31
Identity = 66/89 (74.16%), Postives = 77/89 (86.52%), Query Frame = 1


Query: 1  MGLKEEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAW 60
          MGLKE+FEE+AEK K L  + SNE+ LILYGLYKQATVGPV TSRPG+F+ ++RAKWDAW
Sbjct: 1  MGLKEDFEEHAEKVKKLTASPSNEDLLILYGLYKQATVGPVTTSRPGMFSMKERAKWDAW 60

Query: 61 KAVEAKSKDDAMSDYITKVKQLQEAAAAN 90
          KAVE KS D+AMSDYITKVKQL EA A++
Sbjct: 61 KAVEGKSTDEAMSDYITKVKQLLEAEASS 89

[Close]

BLAST of CmoCh16G012650 vs. Swiss-Prot
Match: ACBP6_ARATH (Acyl-CoA-binding domain-containing protein 6 OS=Arabidopsis thaliana GN=ACBP6 PE=1 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 8.7e-30
Identity = 64/88 (72.73%), Postives = 75/88 (85.23%), Query Frame = 1


Query: 1  MGLKEEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAW 60
          MGLKEEFEE+AEK  TL E  SNE+ LILYGLYKQA  GPV+TSRPG+F+ ++RAKWDAW
Sbjct: 1  MGLKEEFEEHAEKVNTLTELPSNEDLLILYGLYKQAKFGPVDTSRPGMFSMKERAKWDAW 60

Query: 61 KAVEAKSKDDAMSDYITKVKQLQEAAAA 89
          KAVE KS ++AM+DYITKVKQL E AA+
Sbjct: 61 KAVEGKSSEEAMNDYITKVKQLLEVAAS 88

[Close]

BLAST of CmoCh16G012650 vs. TrEMBL
Match: K9ZUG4_VERFO (Acyl-CoA binding protein 6 OS=Vernicia fordii GN=ACBP6 PE=2 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 2.7e-38
Identity = 81/88 (92.05%), Postives = 85/88 (96.59%), Query Frame = 1


Query: 1  MGLKEEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAW 60
          MGLKEEFEEYAEKAKTLPENT+NENKLILYGLYKQATVGPVNTSRPG+FNQRDRAKWDAW
Sbjct: 1  MGLKEEFEEYAEKAKTLPENTTNENKLILYGLYKQATVGPVNTSRPGIFNQRDRAKWDAW 60

Query: 61 KAVEAKSKDDAMSDYITKVKQLQEAAAA 89
          KAVE KSK++AMSDYITKVKQL E AAA
Sbjct: 61 KAVEGKSKEEAMSDYITKVKQLLEEAAA 88

[Close]

BLAST of CmoCh16G012650 vs. TrEMBL
Match: M0SQ12_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 3.5e-38
Identity = 82/88 (93.18%), Postives = 84/88 (95.45%), Query Frame = 1


Query: 1  MGLKEEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAW 60
          MGLKEEFEEYAEKAKTLPENT+NENKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAW
Sbjct: 1  MGLKEEFEEYAEKAKTLPENTTNENKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAW 60

Query: 61 KAVEAKSKDDAMSDYITKVKQLQEAAAA 89
           AVE KSK+DAMSDYITKVKQL E AAA
Sbjct: 61 MAVEGKSKEDAMSDYITKVKQLLEEAAA 88

[Close]

BLAST of CmoCh16G012650 vs. TrEMBL
Match: A0A0A0L140_CUCSA (Acyl-CoA-binding protein OS=Cucumis sativus GN=Csa_3G004510 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 3.9e-37
Identity = 78/89 (87.64%), Postives = 88/89 (98.88%), Query Frame = 1


Query: 1  MGLKEEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAW 60
          MGLKE+FEEYAEKAKTLPE+T+NENKLILYGLYKQATVGPV TSRPG+F+Q++RAKWDAW
Sbjct: 1  MGLKEDFEEYAEKAKTLPESTTNENKLILYGLYKQATVGPVTTSRPGMFSQKERAKWDAW 60

Query: 61 KAVEAKSKDDAMSDYITKVKQLQEAAAAN 90
          KAVEAKSK+DAM+DYITKVKQLQEAAAA+
Sbjct: 61 KAVEAKSKEDAMNDYITKVKQLQEAAAAS 89

[Close]

BLAST of CmoCh16G012650 vs. TrEMBL
Match: W9SCA0_9ROSA (Acyl-CoA-binding protein OS=Morus notabilis GN=L484_022710 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 1.5e-36
Identity = 78/88 (88.64%), Postives = 84/88 (95.45%), Query Frame = 1


Query: 1  MGLKEEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAW 60
          MGL+EEFEEYAEKAKTLPE+T+NENKLILYGLYKQATVGPVNTSRPG+FN RDRAKWDAW
Sbjct: 1  MGLQEEFEEYAEKAKTLPESTTNENKLILYGLYKQATVGPVNTSRPGIFNLRDRAKWDAW 60

Query: 61 KAVEAKSKDDAMSDYITKVKQLQEAAAA 89
          KAVE KSKD+AM+DYITKVKQL E AAA
Sbjct: 61 KAVEGKSKDEAMNDYITKVKQLLEEAAA 88

[Close]

BLAST of CmoCh16G012650 vs. TrEMBL
Match: M0RYT7_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 3.3e-36
Identity = 77/88 (87.50%), Postives = 83/88 (94.32%), Query Frame = 1


Query: 1  MGLKEEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAW 60
          MGL+E+FEEYA KAKTLPENT+NENKLILYGLYKQATVGPVNTSRPG+FN RDRAKWDAW
Sbjct: 1  MGLQEDFEEYAAKAKTLPENTTNENKLILYGLYKQATVGPVNTSRPGIFNMRDRAKWDAW 60

Query: 61 KAVEAKSKDDAMSDYITKVKQLQEAAAA 89
          KAVE KSK++AMSDYITKVKQL E AAA
Sbjct: 61 KAVEGKSKEEAMSDYITKVKQLLEEAAA 88

[Close]

BLAST of CmoCh16G012650 vs. TAIR10
Match: AT1G31812.1 (AT1G31812.1 acyl-CoA-binding protein 6)

HSP 1 Score: 130.6 bits (327), Expect = 4.9e-31
Identity = 64/88 (72.73%), Postives = 75/88 (85.23%), Query Frame = 1


Query: 1  MGLKEEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAW 60
          MGLKEEFEE+AEK  TL E  SNE+ LILYGLYKQA  GPV+TSRPG+F+ ++RAKWDAW
Sbjct: 1  MGLKEEFEEHAEKVNTLTELPSNEDLLILYGLYKQAKFGPVDTSRPGMFSMKERAKWDAW 60

Query: 61 KAVEAKSKDDAMSDYITKVKQLQEAAAA 89
          KAVE KS ++AM+DYITKVKQL E AA+
Sbjct: 61 KAVEGKSSEEAMNDYITKVKQLLEVAAS 88

[Close]

BLAST of CmoCh16G012650 vs. TAIR10
Match: AT5G53470.1 (AT5G53470.1 acyl-CoA binding protein 1)

HSP 1 Score: 60.1 bits (144), Expect = 8.1e-10
Identity = 32/75 (42.67%), Postives = 40/75 (53.33%), Query Frame = 1


Query: 11  AEKAKTLPENTSNENKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAWKAVEAKSKDD 70
           A  +  L +  SNE +L LYGLYK AT GP    +P       RAKW AW+ + A   ++
Sbjct: 107 AAASDRLSQKVSNELQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWQKLGAMPPEE 166

Query: 71  AMSDYITKVKQLQEA 86
           AM  YI  V QL  A
Sbjct: 167 AMEKYIDLVTQLYPA 181

[Close]

BLAST of CmoCh16G012650 vs. TAIR10
Match: AT4G27780.1 (AT4G27780.1 acyl-CoA binding protein 2)

HSP 1 Score: 52.8 bits (125), Expect = 1.3e-07
Identity = 27/69 (39.13%), Postives = 36/69 (52.17%), Query Frame = 1


Query: 14  AKTLPENTSNENKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAWKAVEAKSKDDAMS 73
           A  L +   ++ +  LYGLYK AT GP    +P       RAKW AW+ + A   ++AM 
Sbjct: 120 ADRLSQKVPSDVQQQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWQKLGAMPPEEAME 179

Query: 74  DYITKVKQL 83
            YI  V QL
Sbjct: 180 KYIEIVTQL 188

[Close]

BLAST of CmoCh16G012650 vs. TAIR10
Match: AT3G05420.2 (AT3G05420.2 acyl-CoA binding protein 4)

HSP 1 Score: 50.4 bits (119), Expect = 6.4e-07
Identity = 21/63 (33.33%), Postives = 37/63 (58.73%), Query Frame = 1


Query: 14 AKTLPENTSNENKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAWKAVEAKSKDDAMS 73
          AK +     ++  L+LY LY+QATVGP NT +P  +   +++KW +W+ +      +AM 
Sbjct: 32 AKNVISKFPDDTALLLYALYQQATVGPCNTPKPSAWRPVEQSKWKSWQGLGTMPSIEAMR 91

Query: 74 DYI 77
           ++
Sbjct: 92 LFV 94

[Close]

BLAST of CmoCh16G012650 vs. TAIR10
Match: AT5G27630.1 (AT5G27630.1 acyl-CoA binding protein 5)

HSP 1 Score: 49.3 bits (116), Expect = 1.4e-06
Identity = 25/71 (35.21%), Postives = 42/71 (59.15%), Query Frame = 1


Query: 15  KTLPENTSNENKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAWKAVEAKSKDDAMSD 74
           K L    SN+  L+LY L++QAT+GP +  +P  +N  +++KW +W+ +      +AM  
Sbjct: 34  KQLSSKFSNDTSLLLYTLHQQATLGPCSIPKPSAWNPVEQSKWKSWQGLGTMPSIEAMRL 93

Query: 75  YITKVKQLQEA 86
           +   VK L+EA
Sbjct: 94  F---VKILEEA 101

[Close]

BLAST of CmoCh16G012650 vs. NCBI nr
Match: gi|659095442|ref|XP_008448583.1| (PREDICTED: acyl-CoA-binding protein [Cucumis melo])

HSP 1 Score: 166.8 bits (421), Expect = 1.7e-38
Identity = 81/89 (91.01%), Postives = 88/89 (98.88%), Query Frame = 1


Query: 1  MGLKEEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAW 60
          MGLKE+FEEYAEKAKTLPENTSNENKLILYGLYKQATVGPV TSRPG+FNQ++RAKWDAW
Sbjct: 1  MGLKEDFEEYAEKAKTLPENTSNENKLILYGLYKQATVGPVTTSRPGMFNQKERAKWDAW 60

Query: 61 KAVEAKSKDDAMSDYITKVKQLQEAAAAN 90
          KAVEAKSK+DAM+DYITKVKQLQEAAAA+
Sbjct: 61 KAVEAKSKEDAMNDYITKVKQLQEAAAAS 89

[Close]

BLAST of CmoCh16G012650 vs. NCBI nr
Match: gi|428754000|gb|AFZ62125.1| (acyl-CoA binding protein 6 [Vernicia fordii])

HSP 1 Score: 165.6 bits (418), Expect = 3.9e-38
Identity = 81/88 (92.05%), Postives = 85/88 (96.59%), Query Frame = 1


Query: 1  MGLKEEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAW 60
          MGLKEEFEEYAEKAKTLPENT+NENKLILYGLYKQATVGPVNTSRPG+FNQRDRAKWDAW
Sbjct: 1  MGLKEEFEEYAEKAKTLPENTTNENKLILYGLYKQATVGPVNTSRPGIFNQRDRAKWDAW 60

Query: 61 KAVEAKSKDDAMSDYITKVKQLQEAAAA 89
          KAVE KSK++AMSDYITKVKQL E AAA
Sbjct: 61 KAVEGKSKEEAMSDYITKVKQLLEEAAA 88

[Close]

BLAST of CmoCh16G012650 vs. NCBI nr
Match: gi|743862792|ref|XP_010943634.1| (PREDICTED: acyl-CoA-binding protein [Elaeis guineensis])

HSP 1 Score: 165.2 bits (417), Expect = 5.1e-38
Identity = 81/88 (92.05%), Postives = 85/88 (96.59%), Query Frame = 1


Query: 1  MGLKEEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAW 60
          MGLKEEFEEYAEKAKTLPENT+NENKLILYGLYKQATVGPVNTSRPG+FN +DRAKWDAW
Sbjct: 1  MGLKEEFEEYAEKAKTLPENTANENKLILYGLYKQATVGPVNTSRPGMFNWKDRAKWDAW 60

Query: 61 KAVEAKSKDDAMSDYITKVKQLQEAAAA 89
          KAVE KSK+DAMSDYITKVKQLQE AAA
Sbjct: 61 KAVEGKSKEDAMSDYITKVKQLQEEAAA 88

[Close]

BLAST of CmoCh16G012650 vs. NCBI nr
Match: gi|695020057|ref|XP_009397065.1| (PREDICTED: acyl-CoA-binding protein-like [Musa acuminata subsp. malaccensis])

HSP 1 Score: 165.2 bits (417), Expect = 5.1e-38
Identity = 82/88 (93.18%), Postives = 84/88 (95.45%), Query Frame = 1


Query: 1  MGLKEEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAW 60
          MGLKEEFEEYAEKAKTLPENT+NENKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAW
Sbjct: 1  MGLKEEFEEYAEKAKTLPENTTNENKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAW 60

Query: 61 KAVEAKSKDDAMSDYITKVKQLQEAAAA 89
           AVE KSK+DAMSDYITKVKQL E AAA
Sbjct: 61 MAVEGKSKEDAMSDYITKVKQLLEEAAA 88

[Close]

BLAST of CmoCh16G012650 vs. NCBI nr
Match: gi|672191820|ref|XP_008775605.1| (PREDICTED: acyl-CoA-binding protein [Phoenix dactylifera])

HSP 1 Score: 163.3 bits (412), Expect = 1.9e-37
Identity = 79/89 (88.76%), Postives = 85/89 (95.51%), Query Frame = 1


Query: 1  MGLKEEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAW 60
          MGLKEEFEEYAEKAKTLPEN +NENKLILYGLYKQATVGPVNTSRPG+FN +DRAKWDAW
Sbjct: 1  MGLKEEFEEYAEKAKTLPENITNENKLILYGLYKQATVGPVNTSRPGIFNMKDRAKWDAW 60

Query: 61 KAVEAKSKDDAMSDYITKVKQLQEAAAAN 90
          KAVE KSK++AMSDYITKVKQLQE AAA+
Sbjct: 61 KAVEGKSKEEAMSDYITKVKQLQEEAAAS 89

The following BLAST results are available for this feature:

BLAST of CmoCh16G012650 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ACBP_RICCO	3.3e-37	85.39	Acyl-CoA-binding protein OS=Ricinus communis PE=3 SV=1	[more]
ACBP_FRIAG	1.7e-33	79.31	Acyl-CoA-binding protein OS=Fritillaria agrestis GN=ACABP PE=3 SV=1	[more]
ACBP_GOSHI	1.1e-32	76.40	Acyl-CoA-binding protein OS=Gossypium hirsutum PE=3 SV=1	[more]
ACBP_BRANA	6.0e-31	74.16	Acyl-CoA-binding protein OS=Brassica napus PE=3 SV=1	[more]
ACBP6_ARATH	8.7e-30	72.73	Acyl-CoA-binding domain-containing protein 6 OS=Arabidopsis thaliana GN=ACBP6 PE...	[more]

BLAST of CmoCh16G012650 vs. TrEMBL


Match Name	E-value	Identity	Description
K9ZUG4_VERFO	2.7e-38	92.05	Acyl-CoA binding protein 6 OS=Vernicia fordii GN=ACBP6 PE=2 SV=1	[more]
M0SQ12_MUSAM	3.5e-38	93.18	Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1	[more]
A0A0A0L140_CUCSA	3.9e-37	87.64	Acyl-CoA-binding protein OS=Cucumis sativus GN=Csa_3G004510 PE=4 SV=1	[more]
W9SCA0_9ROSA	1.5e-36	88.64	Acyl-CoA-binding protein OS=Morus notabilis GN=L484_022710 PE=4 SV=1	[more]
M0RYT7_MUSAM	3.3e-36	87.50	Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1	[more]

BLAST of CmoCh16G012650 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G31812.1	4.9e-31	72.73	acyl-CoA-binding protein 6	[more]
AT5G53470.1	8.1e-10	42.67	acyl-CoA binding protein 1	[more]
AT4G27780.1	1.3e-07	39.13	acyl-CoA binding protein 2	[more]
AT3G05420.2	6.4e-07	33.33	acyl-CoA binding protein 4	[more]
AT5G27630.1	1.4e-06	35.21	acyl-CoA binding protein 5	[more]

BLAST of CmoCh16G012650 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659095442\|ref\|XP_008448583.1\|	1.7e-38	91.01	PREDICTED: acyl-CoA-binding protein [Cucumis melo]	[more]
gi\|428754000\|gb\|AFZ62125.1\|	3.9e-38	92.05	acyl-CoA binding protein 6 [Vernicia fordii]	[more]
gi\|743862792\|ref\|XP_010943634.1\|	5.1e-38	92.05	PREDICTED: acyl-CoA-binding protein [Elaeis guineensis]	[more]
gi\|695020057\|ref\|XP_009397065.1\|	5.1e-38	93.18	PREDICTED: acyl-CoA-binding protein-like [Musa acuminata subsp. malaccensis]	[more]
gi\|672191820\|ref\|XP_008775605.1\|	1.9e-37	88.76	PREDICTED: acyl-CoA-binding protein [Phoenix dactylifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000582	Acyl-CoA-binding_protein
IPR014352	FERM/acyl-CoA-bd_prot_sf
IPR022408	Acyl-CoA-binding_prot_CS

Vocabulary: **Molecular Function**
Term	Definition
GO:0000062	fatty-acyl-CoA binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006816	calcium ion transport
biological_process	GO:0019344	cysteine biosynthetic process
biological_process	GO:0007030	Golgi organization
biological_process	GO:0006869	lipid transport
biological_process	GO:0010264	myo-inositol hexakisphosphate biosynthetic process
biological_process	GO:0009646	response to absence of light
biological_process	GO:0050826	response to freezing
biological_process	GO:0009651	response to salt stress
biological_process	GO:0008150	biological_process
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0000062	fatty-acyl-CoA binding
molecular_function	GO:0031210	phosphatidylcholine binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh16G012650.1	CmoCh16G012650.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000582	Acyl-CoA-binding protein, ACBP	PRINTS	PR00689	ACOABINDINGP	coord: 21..39 score: 7.2E-27coord: 65..82 score: 7.2E-27coord: 44..59 score: 7.2E-27coord: 4..19 score: 7.2
IPR000582	Acyl-CoA-binding protein, ACBP	PFAM	PF00887	ACBP	coord: 5..82 score: 2.1
IPR000582	Acyl-CoA-binding protein, ACBP	PROFILE	PS51228	ACB_2	coord: 3..88 score: 39
IPR000582	Acyl-CoA-binding protein, ACBP	unknown	SSF47027	Acyl-CoA binding protein	coord: 3..83 score: 4.97
IPR014352	FERM/acyl-CoA-binding protein, 3-helical bundle	GENE3D	G3DSA:1.20.80.10		coord: 3..85 score: 2.4
IPR022408	Acyl-CoA-binding protein, ACBP, conserved site	PROSITE	PS00880	ACB_1	coord: 21..39 scor
None	No IPR available	PANTHER	PTHR23310	ACYL-COA-BINDING PROTEIN, ACBP	coord: 1..84 score: 1.5
None	No IPR available	PANTHER	PTHR23310:SF67	SUBFAMILY NOT NAMED	coord: 1..84 score: 1.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh16G012650	Cucsa.322400	Cucumber (Gy14) v1	cgycmoB0885
CmoCh16G012650	CmaCh16G012220	Cucurbita maxima (Rimu)	cmacmoB323
CmoCh16G012650	CmaCh06G005980	Cucurbita maxima (Rimu)	cmacmoB807
CmoCh16G012650	Cla008874	Watermelon (97103) v1	cmowmB285
CmoCh16G012650	Csa3G004510	Cucumber (Chinese Long) v2	cmocuB316
CmoCh16G012650	MELO3C013788	Melon (DHL92) v3.5.1	cmomeB284
CmoCh16G012650	ClCG10G000940	Watermelon (Charleston Gray)	cmowcgB276
CmoCh16G012650	CSPI03G00970	Wild cucumber (PI 183967)	cmocpiB323
CmoCh16G012650	Cp4.1LG08g09030	Cucurbita pepo (Zucchini)	cmocpeB327
CmoCh16G012650	Cp4.1LG14g10020	Cucurbita pepo (Zucchini)	cmocpeB308
CmoCh16G012650	MELO3C031937.2	Melon (DHL92) v3.6.1	cmomedB329
CmoCh16G012650	CsaV3_3G001010	Cucumber (Chinese Long) v3	cmocucB0377
CmoCh16G012650	Cla97C10G185550	Watermelon (97103) v2	cmowmbB320
CmoCh16G012650	BhiUN179G7	Wax gourd	cmowgoB0447
CmoCh16G012650	CsGy3G000910	Cucumber (Gy14) v2	cgybcmoB310
CmoCh16G012650	Carg16284	Silver-seed gourd	carcmoB0932
CmoCh16G012650	Carg19492	Silver-seed gourd	carcmoB0581

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh16G012650	CmoCh06G006040	Cucurbita moschata (Rifu)	cmocmoB293

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh16G012650	Bottle gourd (USVL1VR-Ls)	cmolsiB313