CmoCh06G006040 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh06G006040
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Acyl-CoA-binding protein
Location	Cmo_Chr06 : 2976171 .. 2977172 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTATCTTTCTGGTGTTCGTTCTAGGTAGTATGAATCTAAATGCATGTAGTCTGTGCCACAATTTGATGAGGCTGAGTTCTGCAGGAAGAATTTGAGGAGTATGCTGAAAAGGCAAAGACCTTGCCGGAGAACACAAGCAATGAAAACAAACTCATTCTCTATGGACTATACAAGCAAGCCACTGTTGGAGCCGTGAACACTAGTCAGTTCTTTTTTCCACTCGAATGCAATTTCTGTAGAAACGCTGTGTGTAGTTGGAATTATGTGATCAAACCCTCCAATTAAACCGTTTATTGCAATTATGACTGATTTGTAGGCCGCCCTGGAGTGTTCTACCAGAGGGACAGAGCCAAATGGGATGCCTGGAAGGCCGTTGAAGGTAATGTTTTAGTATGTTTATATAGAACATTTTTGCTAGTTTTTCTATAGGCGGCAAACCTTTACTCTTAAGTTGGGGGGGAGCTTGGTTGTGAAACTAAGAATTTACCAGAATTGAGCTTTGATCGAAGAGACTGAAATAATTTTGCAGCAAAATCCAAGGATGATGCAATGAGCGACTATATCACCAAGGTGAAACAGTTGCAAGAGTCAGCTGCAGCTAACTGATGAGCTTTAATTATCTGTATGGACAATGATGCTCAAATAATTCTTGTTTAAGTTCAGTACCTTAATCGTATGTATCTAAATTCTGCGACAATGAACCATTTGTTAGTATCTGATGTCCTTAAAAGCAAATCCAGATATCTGATGTCCTTAAAAGCAGGACAATGTGAACTTGCTTGGGTGTCTTTGTCCTTTCGAACGTCAAATTTGTAATAATTTAGCTATTGAACCTAATACCAATTTAGTTTTACACTTCAAAATTTCTAACAATTTGATCATTGCCTTGAAAAATCTCATCAAATTTTGTGGATTCTTCTCTATTTGAAGATCCCAAATCTTTTGGGTTGCTTTTTCCCATCAAGATTGGTTTCATTTCTTTATGTTATTTGTACCGTA

mRNA sequence

ATGGAAGAATTTGAGGAGTATGCTGAAAAGGCAAAGACCTTGCCGGAGAACACAAGCAATGAAAACAAACTCATTCTCTATGGACTATACAAGCAAGCCACTGTTGGAGCCGTGAACACTAGCCGCCCTGGAGTGTTCTACCAGAGGGACAGAGCCAAATGGGATGCCTGGAAGGCCGTTGAAGCAAAATCCAAGGATGATGCAATGAGCGACTATATCACCAAGGTGAAACAGTTGCAAGAGTCAGCTGCAGCTAACTGATGAGCTTTAATTATCTGTATGGACAATGATGCTCAAATAATTCTTGTTTAAGTTCAGTACCTTAATCGTATGTATCTAAATTCTGCGACAATGAACCATTTGTTAGTATCTGATGTCCTTAAAAGCAAATCCAGATATCTGATGTCCTTAAAAGCAGGACAATGTGAACTTGCTTGGGTGTCTTTGTCCTTTCGAACGTCAAATTTGTAATAATTTAGCTATTGAACCTAATACCAATTTAGTTTTACACTTCAAAATTTCTAACAATTTGATCATTGCCTTGAAAAATCTCATCAAATTTTGTGGATTCTTCTCTATTTGAAGATCCCAAATCTTTTGGGTTGCTTTTTCCCATCAAGATTGGTTTCATTTCTTTATGTTATTTGTACCGTA

Coding sequence (CDS)

ATGGAAGAATTTGAGGAGTATGCTGAAAAGGCAAAGACCTTGCCGGAGAACACAAGCAATGAAAACAAACTCATTCTCTATGGACTATACAAGCAAGCCACTGTTGGAGCCGTGAACACTAGCCGCCCTGGAGTGTTCTACCAGAGGGACAGAGCCAAATGGGATGCCTGGAAGGCCGTTGAAGCAAAATCCAAGGATGATGCAATGAGCGACTATATCACCAAGGTGAAACAGTTGCAAGAGTCAGCTGCAGCTAACTGA

Homology

[Close]

BLAST of CmoCh06G006040 vs. Swiss-Prot
Match: ACBP_RICCO (Acyl-CoA-binding protein OS=Ricinus communis PE=3 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 6.2e-33
Identity = 70/85 (82.35%), Postives = 77/85 (90.59%), Query Frame = 1


Query: 2  EEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGAVNTSRPGVFYQRDRAKWDAWKAVE 61
          E+FEE+AEKAKTLPENT+NENKLILYGLYKQATVG VNTSRPG+F  RDRAKWDAWKAVE
Sbjct: 5  EDFEEHAEKAKTLPENTTNENKLILYGLYKQATVGPVNTSRPGMFNMRDRAKWDAWKAVE 64

Query: 62 AKSKDDAMSDYITKVKQLQESAAAN 87
           KS ++AMSDYITKVKQL   AAA+
Sbjct: 65 GKSTEEAMSDYITKVKQLLGEAAAS 89

[Close]

BLAST of CmoCh06G006040 vs. Swiss-Prot
Match: ACBP_FRIAG (Acyl-CoA-binding protein OS=Fritillaria agrestis GN=ACABP PE=3 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 2.2e-30
Identity = 65/83 (78.31%), Postives = 74/83 (89.16%), Query Frame = 1


Query: 2  EEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGAVNTSRPGVFYQRDRAKWDAWKAVE 61
          EEFEE+A KAKTLPE+TSNENKLILYGLYKQ+TVG V+T RPG+F  R+RAKWDAWKAVE
Sbjct: 5  EEFEEHAVKAKTLPESTSNENKLILYGLYKQSTVGPVDTGRPGMFSPRERAKWDAWKAVE 64

Query: 62 AKSKDDAMSDYITKVKQLQESAA 85
           KSK++AM DYITKVKQL E +A
Sbjct: 65 GKSKEEAMGDYITKVKQLLEESA 87

[Close]

BLAST of CmoCh06G006040 vs. Swiss-Prot
Match: ACBP_GOSHI (Acyl-CoA-binding protein OS=Gossypium hirsutum PE=3 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 6.0e-28
Identity = 61/85 (71.76%), Postives = 72/85 (84.71%), Query Frame = 1


Query: 2  EEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGAVNTSRPGVFYQRDRAKWDAWKAVE 61
          EEFEE+AEK KTLP   SN++ LILYGLYKQATVG VNTSRPG+F  R++ KWDAWKAVE
Sbjct: 5  EEFEEHAEKVKTLPAAPSNDDMLILYGLYKQATVGPVNTSRPGMFNMREKYKWDAWKAVE 64

Query: 62 AKSKDDAMSDYITKVKQLQESAAAN 87
           KSK++AM DYITKVKQL E+A ++
Sbjct: 65 GKSKEEAMGDYITKVKQLFEAAGSS 89

[Close]

BLAST of CmoCh06G006040 vs. Swiss-Prot
Match: ACBP_BRANA (Acyl-CoA-binding protein OS=Brassica napus PE=3 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 8.7e-27
Identity = 60/85 (70.59%), Postives = 71/85 (83.53%), Query Frame = 1


Query: 2  EEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGAVNTSRPGVFYQRDRAKWDAWKAVE 61
          E+FEE+AEK K L  + SNE+ LILYGLYKQATVG V TSRPG+F  ++RAKWDAWKAVE
Sbjct: 5  EDFEEHAEKVKKLTASPSNEDLLILYGLYKQATVGPVTTSRPGMFSMKERAKWDAWKAVE 64

Query: 62 AKSKDDAMSDYITKVKQLQESAAAN 87
           KS D+AMSDYITKVKQL E+ A++
Sbjct: 65 GKSTDEAMSDYITKVKQLLEAEASS 89

[Close]

BLAST of CmoCh06G006040 vs. Swiss-Prot
Match: ACBP6_ARATH (Acyl-CoA-binding domain-containing protein 6 OS=Arabidopsis thaliana GN=ACBP6 PE=1 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 9.6e-26
Identity = 59/84 (70.24%), Postives = 69/84 (82.14%), Query Frame = 1


Query: 2  EEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGAVNTSRPGVFYQRDRAKWDAWKAVE 61
          EEFEE+AEK  TL E  SNE+ LILYGLYKQA  G V+TSRPG+F  ++RAKWDAWKAVE
Sbjct: 5  EEFEEHAEKVNTLTELPSNEDLLILYGLYKQAKFGPVDTSRPGMFSMKERAKWDAWKAVE 64

Query: 62 AKSKDDAMSDYITKVKQLQESAAA 86
           KS ++AM+DYITKVKQL E AA+
Sbjct: 65 GKSSEEAMNDYITKVKQLLEVAAS 88

[Close]

BLAST of CmoCh06G006040 vs. TrEMBL
Match: A0A059Q2J3_9POAL (Acyl-CoA-binding protein OS=Saccharum hybrid cultivar R570 GN=SHCRBa_010_J05_R_210 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 4.6e-35
Identity = 75/85 (88.24%), Postives = 80/85 (94.12%), Query Frame = 1


Query: 2  EEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGAVNTSRPGVFYQRDRAKWDAWKAVE 61
          EEFEEYAEKAKTLPENTSNENKLILYGLYKQATVG VNT RPG+FYQ+DRAKWDAWKAVE
Sbjct: 5  EEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGIVNTDRPGIFYQKDRAKWDAWKAVE 64

Query: 62 AKSKDDAMSDYITKVKQLQESAAAN 87
           KSK++AMSDYITKVKQLQE AA +
Sbjct: 65 GKSKEEAMSDYITKVKQLQEEAATS 89

[Close]

BLAST of CmoCh06G006040 vs. TrEMBL
Match: B6UB43_MAIZE (Acyl-CoA-binding protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 6.0e-35
Identity = 75/85 (88.24%), Postives = 81/85 (95.29%), Query Frame = 1


Query: 2  EEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGAVNTSRPGVFYQRDRAKWDAWKAVE 61
          EEFEE+AEKAKTLPENTSNENKLILYGLYKQATVG VNT RPG+FYQ+DRAKWDAWKAVE
Sbjct: 5  EEFEEHAEKAKTLPENTSNENKLILYGLYKQATVGDVNTDRPGIFYQKDRAKWDAWKAVE 64

Query: 62 AKSKDDAMSDYITKVKQLQESAAAN 87
           KSKD+AM+DYITKVKQLQE AAA+
Sbjct: 65 GKSKDEAMNDYITKVKQLQEEAAAS 89

[Close]

BLAST of CmoCh06G006040 vs. TrEMBL
Match: B4FER8_MAIZE (Acyl-CoA-binding protein OS=Zea mays GN=ZEAMMB73_795592 PE=2 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 2.3e-34
Identity = 74/85 (87.06%), Postives = 81/85 (95.29%), Query Frame = 1


Query: 2  EEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGAVNTSRPGVFYQRDRAKWDAWKAVE 61
          EEFEE+AEKAKTLPE+TSNENKLILYGLYKQATVG VNT RPG+FYQ+DRAKWDAWKAVE
Sbjct: 5  EEFEEHAEKAKTLPESTSNENKLILYGLYKQATVGDVNTDRPGIFYQKDRAKWDAWKAVE 64

Query: 62 AKSKDDAMSDYITKVKQLQESAAAN 87
           KSKD+AM+DYITKVKQLQE AAA+
Sbjct: 65 GKSKDEAMNDYITKVKQLQEEAAAS 89

[Close]

BLAST of CmoCh06G006040 vs. TrEMBL
Match: K9ZUG4_VERFO (Acyl-CoA binding protein 6 OS=Vernicia fordii GN=ACBP6 PE=2 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 5.1e-34
Identity = 75/84 (89.29%), Postives = 79/84 (94.05%), Query Frame = 1


Query: 2  EEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGAVNTSRPGVFYQRDRAKWDAWKAVE 61
          EEFEEYAEKAKTLPENT+NENKLILYGLYKQATVG VNTSRPG+F QRDRAKWDAWKAVE
Sbjct: 5  EEFEEYAEKAKTLPENTTNENKLILYGLYKQATVGPVNTSRPGIFNQRDRAKWDAWKAVE 64

Query: 62 AKSKDDAMSDYITKVKQLQESAAA 86
           KSK++AMSDYITKVKQL E AAA
Sbjct: 65 GKSKEEAMSDYITKVKQLLEEAAA 88

[Close]

BLAST of CmoCh06G006040 vs. TrEMBL
Match: M0SQ12_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 6.7e-34
Identity = 76/84 (90.48%), Postives = 78/84 (92.86%), Query Frame = 1


Query: 2  EEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGAVNTSRPGVFYQRDRAKWDAWKAVE 61
          EEFEEYAEKAKTLPENT+NENKLILYGLYKQATVG VNTSRPGVF QRDRAKWDAW AVE
Sbjct: 5  EEFEEYAEKAKTLPENTTNENKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAWMAVE 64

Query: 62 AKSKDDAMSDYITKVKQLQESAAA 86
           KSK+DAMSDYITKVKQL E AAA
Sbjct: 65 GKSKEDAMSDYITKVKQLLEEAAA 88

[Close]

BLAST of CmoCh06G006040 vs. TAIR10
Match: AT1G31812.1 (AT1G31812.1 acyl-CoA-binding protein 6)

HSP 1 Score: 117.1 bits (292), Expect = 5.4e-27
Identity = 59/84 (70.24%), Postives = 69/84 (82.14%), Query Frame = 1


Query: 2  EEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGAVNTSRPGVFYQRDRAKWDAWKAVE 61
          EEFEE+AEK  TL E  SNE+ LILYGLYKQA  G V+TSRPG+F  ++RAKWDAWKAVE
Sbjct: 5  EEFEEHAEKVNTLTELPSNEDLLILYGLYKQAKFGPVDTSRPGMFSMKERAKWDAWKAVE 64

Query: 62 AKSKDDAMSDYITKVKQLQESAAA 86
           KS ++AM+DYITKVKQL E AA+
Sbjct: 65 GKSSEEAMNDYITKVKQLLEVAAS 88

[Close]

BLAST of CmoCh06G006040 vs. TAIR10
Match: AT5G53470.1 (AT5G53470.1 acyl-CoA binding protein 1)

HSP 1 Score: 55.8 bits (133), Expect = 1.5e-08
Identity = 30/72 (41.67%), Postives = 38/72 (52.78%), Query Frame = 1


Query: 8   AEKAKTLPENTSNENKLILYGLYKQATVGAVNTSRPGVFYQRDRAKWDAWKAVEAKSKDD 67
           A  +  L +  SNE +L LYGLYK AT G     +P       RAKW AW+ + A   ++
Sbjct: 107 AAASDRLSQKVSNELQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWQKLGAMPPEE 166

Query: 68  AMSDYITKVKQL 80
           AM  YI  V QL
Sbjct: 167 AMEKYIDLVTQL 178

[Close]

BLAST of CmoCh06G006040 vs. TAIR10
Match: AT4G27780.1 (AT4G27780.1 acyl-CoA binding protein 2)

HSP 1 Score: 48.5 bits (114), Expect = 2.4e-06
Identity = 26/69 (37.68%), Postives = 35/69 (50.72%), Query Frame = 1


Query: 11  AKTLPENTSNENKLILYGLYKQATVGAVNTSRPGVFYQRDRAKWDAWKAVEAKSKDDAMS 70
           A  L +   ++ +  LYGLYK AT G     +P       RAKW AW+ + A   ++AM 
Sbjct: 120 ADRLSQKVPSDVQQQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWQKLGAMPPEEAME 179

Query: 71  DYITKVKQL 80
            YI  V QL
Sbjct: 180 KYIEIVTQL 188

[Close]

BLAST of CmoCh06G006040 vs. NCBI nr
Match: gi|530277863|gb|AGT15941.1| (acyl-CoA-binding protein [Saccharum hybrid cultivar R570])

HSP 1 Score: 154.8 bits (390), Expect = 6.6e-35
Identity = 75/85 (88.24%), Postives = 80/85 (94.12%), Query Frame = 1


Query: 2  EEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGAVNTSRPGVFYQRDRAKWDAWKAVE 61
          EEFEEYAEKAKTLPENTSNENKLILYGLYKQATVG VNT RPG+FYQ+DRAKWDAWKAVE
Sbjct: 5  EEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGIVNTDRPGIFYQKDRAKWDAWKAVE 64

Query: 62 AKSKDDAMSDYITKVKQLQESAAAN 87
           KSK++AMSDYITKVKQLQE AA +
Sbjct: 65 GKSKEEAMSDYITKVKQLQEEAATS 89

[Close]

BLAST of CmoCh06G006040 vs. NCBI nr
Match: gi|195654217|gb|ACG46576.1| (acyl-CoA-binding protein [Zea mays])

HSP 1 Score: 154.5 bits (389), Expect = 8.7e-35
Identity = 75/85 (88.24%), Postives = 81/85 (95.29%), Query Frame = 1


Query: 2  EEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGAVNTSRPGVFYQRDRAKWDAWKAVE 61
          EEFEE+AEKAKTLPENTSNENKLILYGLYKQATVG VNT RPG+FYQ+DRAKWDAWKAVE
Sbjct: 5  EEFEEHAEKAKTLPENTSNENKLILYGLYKQATVGDVNTDRPGIFYQKDRAKWDAWKAVE 64

Query: 62 AKSKDDAMSDYITKVKQLQESAAAN 87
           KSKD+AM+DYITKVKQLQE AAA+
Sbjct: 65 GKSKDEAMNDYITKVKQLQEEAAAS 89

[Close]

BLAST of CmoCh06G006040 vs. NCBI nr
Match: gi|836468795|ref|NP_001296805.1| (acyl-CoA-binding protein [Zea mays])

HSP 1 Score: 152.5 bits (384), Expect = 3.3e-34
Identity = 74/85 (87.06%), Postives = 81/85 (95.29%), Query Frame = 1


Query: 2  EEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGAVNTSRPGVFYQRDRAKWDAWKAVE 61
          EEFEE+AEKAKTLPE+TSNENKLILYGLYKQATVG VNT RPG+FYQ+DRAKWDAWKAVE
Sbjct: 5  EEFEEHAEKAKTLPESTSNENKLILYGLYKQATVGDVNTDRPGIFYQKDRAKWDAWKAVE 64

Query: 62 AKSKDDAMSDYITKVKQLQESAAAN 87
           KSKD+AM+DYITKVKQLQE AAA+
Sbjct: 65 GKSKDEAMNDYITKVKQLQEEAAAS 89

[Close]

BLAST of CmoCh06G006040 vs. NCBI nr
Match: gi|428754000|gb|AFZ62125.1| (acyl-CoA binding protein 6 [Vernicia fordii])

HSP 1 Score: 151.4 bits (381), Expect = 7.3e-34
Identity = 75/84 (89.29%), Postives = 79/84 (94.05%), Query Frame = 1


Query: 2  EEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGAVNTSRPGVFYQRDRAKWDAWKAVE 61
          EEFEEYAEKAKTLPENT+NENKLILYGLYKQATVG VNTSRPG+F QRDRAKWDAWKAVE
Sbjct: 5  EEFEEYAEKAKTLPENTTNENKLILYGLYKQATVGPVNTSRPGIFNQRDRAKWDAWKAVE 64

Query: 62 AKSKDDAMSDYITKVKQLQESAAA 86
           KSK++AMSDYITKVKQL E AAA
Sbjct: 65 GKSKEEAMSDYITKVKQLLEEAAA 88

[Close]

BLAST of CmoCh06G006040 vs. NCBI nr
Match: gi|743862792|ref|XP_010943634.1| (PREDICTED: acyl-CoA-binding protein [Elaeis guineensis])

HSP 1 Score: 151.0 bits (380), Expect = 9.6e-34
Identity = 75/84 (89.29%), Postives = 79/84 (94.05%), Query Frame = 1


Query: 2  EEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGAVNTSRPGVFYQRDRAKWDAWKAVE 61
          EEFEEYAEKAKTLPENT+NENKLILYGLYKQATVG VNTSRPG+F  +DRAKWDAWKAVE
Sbjct: 5  EEFEEYAEKAKTLPENTANENKLILYGLYKQATVGPVNTSRPGMFNWKDRAKWDAWKAVE 64

Query: 62 AKSKDDAMSDYITKVKQLQESAAA 86
           KSK+DAMSDYITKVKQLQE AAA
Sbjct: 65 GKSKEDAMSDYITKVKQLQEEAAA 88

The following BLAST results are available for this feature:

BLAST of CmoCh06G006040 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ACBP_RICCO	6.2e-33	82.35	Acyl-CoA-binding protein OS=Ricinus communis PE=3 SV=1	[more]
ACBP_FRIAG	2.2e-30	78.31	Acyl-CoA-binding protein OS=Fritillaria agrestis GN=ACABP PE=3 SV=1	[more]
ACBP_GOSHI	6.0e-28	71.76	Acyl-CoA-binding protein OS=Gossypium hirsutum PE=3 SV=1	[more]
ACBP_BRANA	8.7e-27	70.59	Acyl-CoA-binding protein OS=Brassica napus PE=3 SV=1	[more]
ACBP6_ARATH	9.6e-26	70.24	Acyl-CoA-binding domain-containing protein 6 OS=Arabidopsis thaliana GN=ACBP6 PE...	[more]

BLAST of CmoCh06G006040 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A059Q2J3_9POAL	4.6e-35	88.24	Acyl-CoA-binding protein OS=Saccharum hybrid cultivar R570 GN=SHCRBa_010_J05_R_2...	[more]
B6UB43_MAIZE	6.0e-35	88.24	Acyl-CoA-binding protein OS=Zea mays PE=2 SV=1	[more]
B4FER8_MAIZE	2.3e-34	87.06	Acyl-CoA-binding protein OS=Zea mays GN=ZEAMMB73_795592 PE=2 SV=1	[more]
K9ZUG4_VERFO	5.1e-34	89.29	Acyl-CoA binding protein 6 OS=Vernicia fordii GN=ACBP6 PE=2 SV=1	[more]
M0SQ12_MUSAM	6.7e-34	90.48	Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1	[more]

BLAST of CmoCh06G006040 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G31812.1	5.4e-27	70.24	acyl-CoA-binding protein 6	[more]
AT5G53470.1	1.5e-08	41.67	acyl-CoA binding protein 1	[more]
AT4G27780.1	2.4e-06	37.68	acyl-CoA binding protein 2	[more]

BLAST of CmoCh06G006040 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|530277863\|gb\|AGT15941.1\|	6.6e-35	88.24	acyl-CoA-binding protein [Saccharum hybrid cultivar R570]	[more]
gi\|195654217\|gb\|ACG46576.1\|	8.7e-35	88.24	acyl-CoA-binding protein [Zea mays]	[more]
gi\|836468795\|ref\|NP_001296805.1\|	3.3e-34	87.06	acyl-CoA-binding protein [Zea mays]	[more]
gi\|428754000\|gb\|AFZ62125.1\|	7.3e-34	89.29	acyl-CoA binding protein 6 [Vernicia fordii]	[more]
gi\|743862792\|ref\|XP_010943634.1\|	9.6e-34	89.29	PREDICTED: acyl-CoA-binding protein [Elaeis guineensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000582	Acyl-CoA-binding_protein
IPR014352	FERM/acyl-CoA-bd_prot_sf
IPR022408	Acyl-CoA-binding_prot_CS

Vocabulary: **Molecular Function**
Term	Definition
GO:0000062	fatty-acyl-CoA binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006816	calcium ion transport
biological_process	GO:0019344	cysteine biosynthetic process
biological_process	GO:0007030	Golgi organization
biological_process	GO:0006869	lipid transport
biological_process	GO:0010264	myo-inositol hexakisphosphate biosynthetic process
biological_process	GO:0009646	response to absence of light
biological_process	GO:0050826	response to freezing
biological_process	GO:0009651	response to salt stress
biological_process	GO:0008150	biological_process
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0000062	fatty-acyl-CoA binding
molecular_function	GO:0031210	phosphatidylcholine binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh06G006040.1	CmoCh06G006040.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000582	Acyl-CoA-binding protein, ACBP	PRINTS	PR00689	ACOABINDINGP	coord: 41..56 score: 1.0E-25coord: 18..36 score: 1.0E-25coord: 62..79 score: 1.0E-25coord: 1..16 score: 1.0
IPR000582	Acyl-CoA-binding protein, ACBP	PFAM	PF00887	ACBP	coord: 2..79 score: 2.7
IPR000582	Acyl-CoA-binding protein, ACBP	PROFILE	PS51228	ACB_2	coord: 1..85 score: 39
IPR000582	Acyl-CoA-binding protein, ACBP	unknown	SSF47027	Acyl-CoA binding protein	coord: 2..81 score: 3.66
IPR014352	FERM/acyl-CoA-binding protein, 3-helical bundle	GENE3D	G3DSA:1.20.80.10		coord: 2..82 score: 5.7
IPR022408	Acyl-CoA-binding protein, ACBP, conserved site	PROSITE	PS00880	ACB_1	coord: 18..36 scor
None	No IPR available	PANTHER	PTHR23310	ACYL-COA-BINDING PROTEIN, ACBP	coord: 2..81 score: 2.9
None	No IPR available	PANTHER	PTHR23310:SF67	SUBFAMILY NOT NAMED	coord: 2..81 score: 2.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh06G006040	Cucsa.322400	Cucumber (Gy14) v1	cgycmoB0896
CmoCh06G006040	CmaCh16G012220	Cucurbita maxima (Rimu)	cmacmoB344
CmoCh06G006040	CmaCh06G005980	Cucurbita maxima (Rimu)	cmacmoB829
CmoCh06G006040	Cla008874	Watermelon (97103) v1	cmowmB783
CmoCh06G006040	Csa3G004510	Cucumber (Chinese Long) v2	cmocuB809
CmoCh06G006040	MELO3C013788	Melon (DHL92) v3.5.1	cmomeB758
CmoCh06G006040	ClCG10G000940	Watermelon (Charleston Gray)	cmowcgB724
CmoCh06G006040	CSPI03G00970	Wild cucumber (PI 183967)	cmocpiB817
CmoCh06G006040	Cp4.1LG08g09030	Cucurbita pepo (Zucchini)	cmocpeB797
CmoCh06G006040	Cp4.1LG14g10020	Cucurbita pepo (Zucchini)	cmocpeB771
CmoCh06G006040	MELO3C031937.2	Melon (DHL92) v3.6.1	cmomedB858
CmoCh06G006040	CsaV3_3G001010	Cucumber (Chinese Long) v3	cmocucB0955
CmoCh06G006040	Cla97C10G185550	Watermelon (97103) v2	cmowmbB813
CmoCh06G006040	BhiUN179G7	Wax gourd	cmowgoB1036
CmoCh06G006040	CsGy3G000910	Cucumber (Gy14) v2	cgybcmoB403
CmoCh06G006040	Carg16284	Silver-seed gourd	carcmoB0933
CmoCh06G006040	Carg19492	Silver-seed gourd	carcmoB0582

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh06G006040	CmoCh16G012650	Cucurbita moschata (Rifu)	cmocmoB293

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh06G006040	Bottle gourd (USVL1VR-Ls)	cmolsiB763