Carg16284 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg16284
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Acyl-CoA-binding protein
Location	Cucurbita_argyrosperma_scaffold_077 : 516191 .. 517061 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTATCTTTCTGGTGTTCGTTCTATGGAGTACGAATCTAAATGCATGTAGTCTGTGCCACAATTTGATGAGGCTGAGTTCTGCAGGAAGAATTTGAGGAGTATGCTGAAAAGGCAAAGACCTTGCCGGAGAACACAAGCAATGAAAACAAGCTCATTCTCTATGGACTATACAAGCAAGCCACTGTTGGAGCCGTGAACACTAGTCAGTTCTTTCTTCCACTCGAATGCAATTTCTGTAGAAACTCTGTGTTTAGTTGGAATTATGTGATCAAACCCTCCAATTAAACCGTTTATTGCAATTATGACTGATTTGTAGGCCGCCCTGGAGTGTTCTACCAGAGGGACAGAGCCAAATGGGATGCCTGGAAGGCCGTTGAAGGTAATGTTTTAGTATGTTTATATAGAACATTTTTGCTAGTTTTTCTATAGGCGGCAAACCTTTACTCTTAAGTTGGGGGGGAGCTTGGTTGTGAAACTAAGAATTTACCAGAATTGAGCTTTGATCGAAGAGACTGAAATAATTTTGCAGCAAAATCCAAGGATGATGCAATGAGCGACTATATCACCAAGGTGAAACAGTTGCAAGAGTCAGCTGCAGCTAACTGATGAGCTTTAATTATCTGTATGGACAATGATGCTCAAATAATTCTTGTTTAAGTTCAGTACCTTAATCGTATGTATCTAAATTCTGCGACAATGAACCATTTGTTAGTATCTGATGTCCTTAAAAGCAAATCCAGATATCTGATGTCCTTAAAAGCAGGACAATGTGAACTTGCTTGGGTGTCTTTGTCCTTTCGAACGTCAAATTTGTAATAATTTAGCTATTGAACCCAATACCAATTTAGTTTTACACTTCAAAATTTCT

mRNA sequence

ATGGAAGAATTTGAGGAGTATGCTGAAAAGGCAAAGACCTTGCCGGAGAACACAAGCAATGAAAACAAGCTCATTCTCTATGGACTATACAAGCAAGCCACTGTTGGAGCCGTGAACACTAGCCGCCCTGGAGTGTTCTACCAGAGGGACAGAGCCAAATGGGATGCCTGGAAGGCCGTTGAAGCAAAATCCAAGGATGATGCAATGAGCGACTATATCACCAAGGTGAAACAGTTGCAAGAGTCAGCTGCAGCTAACTGATGAGCTTTAATTATCTGTATGGACAATGATGCTCAAATAATTCTTGTTTAAGTTCAGTACCTTAATCGTATGTATCTAAATTCTGCGACAATGAACCATTTGTTAGTATCTGATGTCCTTAAAAGCAAATCCAGATATCTGATGTCCTTAAAAGCAGGACAATGTGAACTTGCTTGGGTGTCTTTGTCCTTTCGAACGTCAAATTTGTAATAATTTAGCTATTGAACCCAATACCAATTTAGTTTTACACTTCAAAATTTCT

Coding sequence (CDS)

ATGGAAGAATTTGAGGAGTATGCTGAAAAGGCAAAGACCTTGCCGGAGAACACAAGCAATGAAAACAAGCTCATTCTCTATGGACTATACAAGCAAGCCACTGTTGGAGCCGTGAACACTAGCCGCCCTGGAGTGTTCTACCAGAGGGACAGAGCCAAATGGGATGCCTGGAAGGCCGTTGAAGCAAAATCCAAGGATGATGCAATGAGCGACTATATCACCAAGGTGAAACAGTTGCAAGAGTCAGCTGCAGCTAACTGA

Protein sequence

MEEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGAVNTSRPGVFYQRDRAKWDAWKAVEAKSKDDAMSDYITKVKQLQESAAAN

Homology

[Close]

BLAST of Carg16284 vs. NCBI nr
Match: XP_022937196.1 (acyl-CoA-binding domain-containing protein 1 [Cucurbita moschata] >XP_023540555.1 acyl-CoA-binding domain-containing protein 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 169.5 bits (428), Expect = 5.1e-39
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0


Query: 2  EEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGAVNTSRPGVFYQRDRAKWDAWKAVE 61
          EEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGAVNTSRPGVFYQRDRAKWDAWKAVE
Sbjct: 5  EEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGAVNTSRPGVFYQRDRAKWDAWKAVE 64

Query: 62 AKSKDDAMSDYITKVKQLQESAAAN 87
          AKSKDDAMSDYITKVKQLQESAAAN
Sbjct: 65 AKSKDDAMSDYITKVKQLQESAAAN 89

[Close]

BLAST of Carg16284 vs. NCBI nr
Match: XP_022923252.1 (acyl-CoA-binding protein [Cucurbita moschata] >XP_022965372.1 acyl-CoA-binding protein [Cucurbita maxima] >XP_023551848.1 acyl-CoA-binding protein [Cucurbita pepo subsp. pepo])

HSP 1 Score: 162.9 bits (411), Expect = 4.7e-37
Identity = 82/85 (96.47%), Postives = 83/85 (97.65%), Query Frame = 0


Query: 2  EEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGAVNTSRPGVFYQRDRAKWDAWKAVE 61
          EEFEEYAEKAKTLPENTSNENKLILYGLYKQATVG VNTSRPGVF QRDRAKWDAWKAVE
Sbjct: 5  EEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAWKAVE 64

Query: 62 AKSKDDAMSDYITKVKQLQESAAAN 87
          AKSKDDAMSDYITKVKQLQE+AAAN
Sbjct: 65 AKSKDDAMSDYITKVKQLQEAAAAN 89

[Close]

BLAST of Carg16284 vs. NCBI nr
Match: XP_023005811.1 (acyl-CoA-binding domain-containing protein 1-like [Cucurbita maxima])

HSP 1 Score: 162.9 bits (411), Expect = 4.7e-37
Identity = 83/85 (97.65%), Postives = 83/85 (97.65%), Query Frame = 0


Query: 2  EEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGAVNTSRPGVFYQRDRAKWDAWKAVE 61
          EEFEEYAEKAKTL ENTSNENKLILYGLYKQATVGAVNTSRPGVF QRDRAKWDAWKAVE
Sbjct: 5  EEFEEYAEKAKTLSENTSNENKLILYGLYKQATVGAVNTSRPGVFNQRDRAKWDAWKAVE 64

Query: 62 AKSKDDAMSDYITKVKQLQESAAAN 87
          AKSKDDAMSDYITKVKQLQESAAAN
Sbjct: 65 AKSKDDAMSDYITKVKQLQESAAAN 89

[Close]

BLAST of Carg16284 vs. NCBI nr
Match: XP_022145449.1 (acyl-CoA-binding protein [Momordica charantia])

HSP 1 Score: 156.4 bits (394), Expect = 4.4e-35
Identity = 77/85 (90.59%), Postives = 83/85 (97.65%), Query Frame = 0


Query: 2  EEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGAVNTSRPGVFYQRDRAKWDAWKAVE 61
          E+FEEYAEKAKTLPENTSNENKLILYGLYKQATVG VNTSRPG+F QRDRAKWDAWKAVE
Sbjct: 5  EDFEEYAEKAKTLPENTSNENKLILYGLYKQATVGPVNTSRPGLFNQRDRAKWDAWKAVE 64

Query: 62 AKSKDDAMSDYITKVKQLQESAAAN 87
          AKSKDDAM+DYITKVKQLQE+AA++
Sbjct: 65 AKSKDDAMNDYITKVKQLQEAAASS 89

[Close]

BLAST of Carg16284 vs. NCBI nr
Match: AGT15941.1 (acyl-CoA-binding protein [Saccharum hybrid cultivar R570])

HSP 1 Score: 154.8 bits (390), Expect = 1.3e-34
Identity = 75/85 (88.24%), Postives = 80/85 (94.12%), Query Frame = 0


Query: 2  EEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGAVNTSRPGVFYQRDRAKWDAWKAVE 61
          EEFEEYAEKAKTLPENTSNENKLILYGLYKQATVG VNT RPG+FYQ+DRAKWDAWKAVE
Sbjct: 5  EEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGIVNTDRPGIFYQKDRAKWDAWKAVE 64

Query: 62 AKSKDDAMSDYITKVKQLQESAAAN 87
           KSK++AMSDYITKVKQLQE AA +
Sbjct: 65 GKSKEEAMSDYITKVKQLQEEAATS 89

[Close]

BLAST of Carg16284 vs. TAIR10
Match: AT1G31812.1 (acyl-CoA-binding protein 6)

HSP 1 Score: 117.1 bits (292), Expect = 5.4e-27
Identity = 59/84 (70.24%), Postives = 69/84 (82.14%), Query Frame = 0


Query: 2  EEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGAVNTSRPGVFYQRDRAKWDAWKAVE 61
          EEFEE+AEK  TL E  SNE+ LILYGLYKQA  G V+TSRPG+F  ++RAKWDAWKAVE
Sbjct: 5  EEFEEHAEKVNTLTELPSNEDLLILYGLYKQAKFGPVDTSRPGMFSMKERAKWDAWKAVE 64

Query: 62 AKSKDDAMSDYITKVKQLQESAAA 86
           KS ++AM+DYITKVKQL E AA+
Sbjct: 65 GKSSEEAMNDYITKVKQLLEVAAS 88

[Close]

BLAST of Carg16284 vs. TAIR10
Match: AT5G53470.1 (acyl-CoA binding protein 1)

HSP 1 Score: 55.8 bits (133), Expect = 1.5e-08
Identity = 30/72 (41.67%), Postives = 38/72 (52.78%), Query Frame = 0


Query: 8   AEKAKTLPENTSNENKLILYGLYKQATVGAVNTSRPGVFYQRDRAKWDAWKAVEAKSKDD 67
           A  +  L +  SNE +L LYGLYK AT G     +P       RAKW AW+ + A   ++
Sbjct: 107 AAASDRLSQKVSNELQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWQKLGAMPPEE 166

Query: 68  AMSDYITKVKQL 80
           AM  YI  V QL
Sbjct: 167 AMEKYIDLVTQL 178

[Close]

BLAST of Carg16284 vs. TAIR10
Match: AT4G27780.1 (acyl-CoA binding protein 2)

HSP 1 Score: 48.5 bits (114), Expect = 2.4e-06
Identity = 26/69 (37.68%), Postives = 35/69 (50.72%), Query Frame = 0


Query: 11  AKTLPENTSNENKLILYGLYKQATVGAVNTSRPGVFYQRDRAKWDAWKAVEAKSKDDAMS 70
           A  L +   ++ +  LYGLYK AT G     +P       RAKW AW+ + A   ++AM 
Sbjct: 120 ADRLSQKVPSDVQQQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWQKLGAMPPEEAME 179

Query: 71  DYITKVKQL 80
            YI  V QL
Sbjct: 180 KYIEIVTQL 188

[Close]

BLAST of Carg16284 vs. TAIR10
Match: AT3G05420.2 (acyl-CoA binding protein 4)

HSP 1 Score: 46.2 bits (108), Expect = 1.2e-05
Identity = 20/63 (31.75%), Postives = 36/63 (57.14%), Query Frame = 0


Query: 11 AKTLPENTSNENKLILYGLYKQATVGAVNTSRPGVFYQRDRAKWDAWKAVEAKSKDDAMS 70
          AK +     ++  L+LY LY+QATVG  NT +P  +   +++KW +W+ +      +AM 
Sbjct: 32 AKNVISKFPDDTALLLYALYQQATVGPCNTPKPSAWRPVEQSKWKSWQGLGTMPSIEAMR 91

Query: 71 DYI 74
           ++
Sbjct: 92 LFV 94

[Close]

BLAST of Carg16284 vs. TAIR10
Match: AT4G24230.6 (acyl-CoA-binding domain 3)

HSP 1 Score: 44.7 bits (104), Expect = 3.4e-05
Identity = 22/63 (34.92%), Postives = 36/63 (57.14%), Query Frame = 0


Query: 16  ENTSNENKLILYGLYKQATVGAVNTSRPGVFYQRDRAKWDAWKAVEAKSKDDAMSDYITK 75
           E    E K+ L+GL+K AT G+   ++P       RAKW+AW+ +   S+++AM  Y+  
Sbjct: 249 EEIGAEAKMELFGLHKIATEGSCREAQPMAVMISARAKWNAWQKLGNMSQEEAMEQYLAL 308

Query: 76  VKQ 79
           V +
Sbjct: 309 VSK 311

[Close]

BLAST of Carg16284 vs. Swiss-Prot
Match: sp|Q75G87|ACBP3_ORYSJ (Acyl-CoA-binding domain-containing protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=ACBP3 PE=2 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 4.0e-35
Identity = 73/84 (86.90%), Postives = 79/84 (94.05%), Query Frame = 0


Query: 2  EEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGAVNTSRPGVFYQRDRAKWDAWKAVE 61
          E+FEEYAEK KTLPE+TSNE+KLILYGLYKQATVG VNTSRPG+F QRDRAKWDAWKAVE
Sbjct: 5  EDFEEYAEKVKTLPESTSNEDKLILYGLYKQATVGDVNTSRPGIFAQRDRAKWDAWKAVE 64

Query: 62 AKSKDDAMSDYITKVKQLQESAAA 86
           KSK++AMSDYITKVKQLQE AAA
Sbjct: 65 GKSKEEAMSDYITKVKQLQEEAAA 88

[Close]

BLAST of Carg16284 vs. Swiss-Prot
Match: sp|Q84SC3|ACBP1_ORYSJ (Acyl-CoA-binding domain-containing protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=ACBP1 PE=1 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 1.2e-34
Identity = 72/84 (85.71%), Postives = 79/84 (94.05%), Query Frame = 0


Query: 2  EEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGAVNTSRPGVFYQRDRAKWDAWKAVE 61
          E+FE+YAEKAKTLPE+TSNENKLILYGLYKQATVG VNT+RPG+F QRDRAKWDAWKAVE
Sbjct: 5  EDFEQYAEKAKTLPESTSNENKLILYGLYKQATVGDVNTARPGIFAQRDRAKWDAWKAVE 64

Query: 62 AKSKDDAMSDYITKVKQLQESAAA 86
           KSK++AMSDYITKVKQL E AAA
Sbjct: 65 GKSKEEAMSDYITKVKQLLEEAAA 88

[Close]

BLAST of Carg16284 vs. Swiss-Prot
Match: sp|O04066|ACBP_RICCO (Acyl-CoA-binding protein OS=Ricinus communis OX=3988 PE=3 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 6.3e-33
Identity = 70/85 (82.35%), Postives = 77/85 (90.59%), Query Frame = 0


Query: 2  EEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGAVNTSRPGVFYQRDRAKWDAWKAVE 61
          E+FEE+AEKAKTLPENT+NENKLILYGLYKQATVG VNTSRPG+F  RDRAKWDAWKAVE
Sbjct: 5  EDFEEHAEKAKTLPENTTNENKLILYGLYKQATVGPVNTSRPGMFNMRDRAKWDAWKAVE 64

Query: 62 AKSKDDAMSDYITKVKQLQESAAAN 87
           KS ++AMSDYITKVKQL   AAA+
Sbjct: 65 GKSTEEAMSDYITKVKQLLGEAAAS 89

[Close]

BLAST of Carg16284 vs. Swiss-Prot
Match: sp|O22643|ACBP_FRIAG (Acyl-CoA-binding protein OS=Fritillaria agrestis OX=64177 GN=ACABP PE=3 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 2.2e-30
Identity = 65/83 (78.31%), Postives = 74/83 (89.16%), Query Frame = 0


Query: 2  EEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGAVNTSRPGVFYQRDRAKWDAWKAVE 61
          EEFEE+A KAKTLPE+TSNENKLILYGLYKQ+TVG V+T RPG+F  R+RAKWDAWKAVE
Sbjct: 5  EEFEEHAVKAKTLPESTSNENKLILYGLYKQSTVGPVDTGRPGMFSPRERAKWDAWKAVE 64

Query: 62 AKSKDDAMSDYITKVKQLQESAA 85
           KSK++AM DYITKVKQL E +A
Sbjct: 65 GKSKEEAMGDYITKVKQLLEESA 87

[Close]

BLAST of Carg16284 vs. Swiss-Prot
Match: sp|Q5VRM0|ACBP2_ORYSJ (Acyl-CoA-binding domain-containing protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=ACBP2 PE=1 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 8.5e-30
Identity = 63/85 (74.12%), Postives = 74/85 (87.06%), Query Frame = 0


Query: 2  EEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGAVNTSRPGVFYQRDRAKWDAWKAVE 61
          EEFEE+AEKAKTLP+  SNE+KL+LYGLYKQATVG V T RPG+F  +DR KWDAWKAVE
Sbjct: 5  EEFEEFAEKAKTLPDTISNEDKLLLYGLYKQATVGPVTTGRPGIFNLKDRYKWDAWKAVE 64

Query: 62 AKSKDDAMSDYITKVKQLQESAAAN 87
           KSK++AM+DYITKVKQL E A+A+
Sbjct: 65 GKSKEEAMADYITKVKQLLEEASAS 89

[Close]

BLAST of Carg16284 vs. TrEMBL
Match: tr|A0A059Q2J3|A0A059Q2J3_9POAL (Acyl-CoA-binding protein OS=Saccharum hybrid cultivar R570 OX=131158 GN=SHCRBa_010_J05_R_210 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 8.5e-35
Identity = 75/85 (88.24%), Postives = 80/85 (94.12%), Query Frame = 0


Query: 2  EEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGAVNTSRPGVFYQRDRAKWDAWKAVE 61
          EEFEEYAEKAKTLPENTSNENKLILYGLYKQATVG VNT RPG+FYQ+DRAKWDAWKAVE
Sbjct: 5  EEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGIVNTDRPGIFYQKDRAKWDAWKAVE 64

Query: 62 AKSKDDAMSDYITKVKQLQESAAAN 87
           KSK++AMSDYITKVKQLQE AA +
Sbjct: 65 GKSKEEAMSDYITKVKQLQEEAATS 89

[Close]

BLAST of Carg16284 vs. TrEMBL
Match: tr|B6UB43|B6UB43_MAIZE (Acyl-CoA-binding protein OS=Zea mays OX=4577 PE=2 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 1.1e-34
Identity = 75/85 (88.24%), Postives = 81/85 (95.29%), Query Frame = 0


Query: 2  EEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGAVNTSRPGVFYQRDRAKWDAWKAVE 61
          EEFEE+AEKAKTLPENTSNENKLILYGLYKQATVG VNT RPG+FYQ+DRAKWDAWKAVE
Sbjct: 5  EEFEEHAEKAKTLPENTSNENKLILYGLYKQATVGDVNTDRPGIFYQKDRAKWDAWKAVE 64

Query: 62 AKSKDDAMSDYITKVKQLQESAAAN 87
           KSKD+AM+DYITKVKQLQE AAA+
Sbjct: 65 GKSKDEAMNDYITKVKQLQEEAAAS 89

[Close]

BLAST of Carg16284 vs. TrEMBL
Match: tr|B4FER8|B4FER8_MAIZE (Acyl-CoA-binding protein OS=Zea mays OX=4577 PE=2 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 4.2e-34
Identity = 74/85 (87.06%), Postives = 81/85 (95.29%), Query Frame = 0


Query: 2  EEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGAVNTSRPGVFYQRDRAKWDAWKAVE 61
          EEFEE+AEKAKTLPE+TSNENKLILYGLYKQATVG VNT RPG+FYQ+DRAKWDAWKAVE
Sbjct: 5  EEFEEHAEKAKTLPESTSNENKLILYGLYKQATVGDVNTDRPGIFYQKDRAKWDAWKAVE 64

Query: 62 AKSKDDAMSDYITKVKQLQESAAAN 87
           KSKD+AM+DYITKVKQLQE AAA+
Sbjct: 65 GKSKDEAMNDYITKVKQLQEEAAAS 89

[Close]

BLAST of Carg16284 vs. TrEMBL
Match: tr|A0A2P4GPK5|A0A2P4GPK5_QUESU (Acyl-coa-binding protein OS=Quercus suber OX=58331 GN=CFP56_33020 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 5.5e-34
Identity = 75/85 (88.24%), Postives = 80/85 (94.12%), Query Frame = 0


Query: 2  EEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGAVNTSRPGVFYQRDRAKWDAWKAVE 61
          EEFEE+AEKAKTLPENT+NENKLILYGLYKQATVG VNTSRPG+F  RDRAKWDAWKAVE
Sbjct: 5  EEFEEHAEKAKTLPENTTNENKLILYGLYKQATVGPVNTSRPGIFNMRDRAKWDAWKAVE 64

Query: 62 AKSKDDAMSDYITKVKQLQESAAAN 87
           KSKD+AMSDYITKVKQLQE AAA+
Sbjct: 65 GKSKDEAMSDYITKVKQLQEEAAAS 89

[Close]

BLAST of Carg16284 vs. TrEMBL
Match: tr|A0A2C9UIZ2|A0A2C9UIZ2_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_15G182400 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 5.5e-34
Identity = 75/84 (89.29%), Postives = 79/84 (94.05%), Query Frame = 0


Query: 2  EEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGAVNTSRPGVFYQRDRAKWDAWKAVE 61
          EEFEEYAEKAKTLPENT+NENKLILYGLYKQATVG VNTSRPG+F  RDRAKWDAWKAVE
Sbjct: 5  EEFEEYAEKAKTLPENTTNENKLILYGLYKQATVGPVNTSRPGIFNMRDRAKWDAWKAVE 64

Query: 62 AKSKDDAMSDYITKVKQLQESAAA 86
           KSK++AMSDYITKVKQLQE AAA
Sbjct: 65 GKSKEEAMSDYITKVKQLQEEAAA 88

The following BLAST results are available for this feature:

BLAST of Carg16284 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022937196.1	5.1e-39	100.00	acyl-CoA-binding domain-containing protein 1 [Cucurbita moschata] >XP_023540555....	[more]
XP_022923252.1	4.7e-37	96.47	acyl-CoA-binding protein [Cucurbita moschata] >XP_022965372.1 acyl-CoA-binding p...	[more]
XP_023005811.1	4.7e-37	97.65	acyl-CoA-binding domain-containing protein 1-like [Cucurbita maxima]	[more]
XP_022145449.1	4.4e-35	90.59	acyl-CoA-binding protein [Momordica charantia]	[more]
AGT15941.1	1.3e-34	88.24	acyl-CoA-binding protein [Saccharum hybrid cultivar R570]	[more]

BLAST of Carg16284 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G31812.1	5.4e-27	70.24	acyl-CoA-binding protein 6	[more]
AT5G53470.1	1.5e-08	41.67	acyl-CoA binding protein 1	[more]
AT4G27780.1	2.4e-06	37.68	acyl-CoA binding protein 2	[more]
AT3G05420.2	1.2e-05	31.75	acyl-CoA binding protein 4	[more]
AT4G24230.6	3.4e-05	34.92	acyl-CoA-binding domain 3	[more]

BLAST of Carg16284 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q75G87\|ACBP3_ORYSJ	4.0e-35	86.90	Acyl-CoA-binding domain-containing protein 3 OS=Oryza sativa subsp. japonica OX=...	[more]
sp\|Q84SC3\|ACBP1_ORYSJ	1.2e-34	85.71	Acyl-CoA-binding domain-containing protein 1 OS=Oryza sativa subsp. japonica OX=...	[more]
sp\|O04066\|ACBP_RICCO	6.3e-33	82.35	Acyl-CoA-binding protein OS=Ricinus communis OX=3988 PE=3 SV=1	[more]
sp\|O22643\|ACBP_FRIAG	2.2e-30	78.31	Acyl-CoA-binding protein OS=Fritillaria agrestis OX=64177 GN=ACABP PE=3 SV=1	[more]
sp\|Q5VRM0\|ACBP2_ORYSJ	8.5e-30	74.12	Acyl-CoA-binding domain-containing protein 2 OS=Oryza sativa subsp. japonica OX=...	[more]

BLAST of Carg16284 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A059Q2J3\|A0A059Q2J3_9POAL	8.5e-35	88.24	Acyl-CoA-binding protein OS=Saccharum hybrid cultivar R570 OX=131158 GN=SHCRBa_0...	[more]
tr\|B6UB43\|B6UB43_MAIZE	1.1e-34	88.24	Acyl-CoA-binding protein OS=Zea mays OX=4577 PE=2 SV=1	[more]
tr\|B4FER8\|B4FER8_MAIZE	4.2e-34	87.06	Acyl-CoA-binding protein OS=Zea mays OX=4577 PE=2 SV=1	[more]
tr\|A0A2P4GPK5\|A0A2P4GPK5_QUESU	5.5e-34	88.24	Acyl-coa-binding protein OS=Quercus suber OX=58331 GN=CFP56_33020 PE=4 SV=1	[more]
tr\|A0A2C9UIZ2\|A0A2C9UIZ2_MANES	5.5e-34	89.29	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_15G182400 PE=4 SV=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0000062	fatty-acyl-CoA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR035984	Acyl-CoA-binding_sf
IPR022408	Acyl-CoA-binding_prot_CS
IPR014352	FERM/acyl-CoA-bd_prot_sf
IPR000582	Acyl-CoA-binding_protein

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0000062	fatty-acyl-CoA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg16284-RA	Carg16284-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000582	Acyl-CoA-binding protein, ACBP	PRINTS	PR00689	ACOABINDINGP	coord: 41..56 score: 50.6 coord: 18..36 score: 62.41 coord: 62..79 score: 50.0 coord: 1..16 score: 42.26
IPR000582	Acyl-CoA-binding protein, ACBP	PFAM	PF00887	ACBP	coord: 2..79 e-value: 1.8E-26 score: 92.1
IPR000582	Acyl-CoA-binding protein, ACBP	PROSITE	PS51228	ACB_2	coord: 1..85 score: 39.056
IPR014352	FERM/acyl-CoA-binding protein superfamily	GENE3D	G3DSA:1.20.80.10		coord: 1..86 e-value: 1.2E-30 score: 107.2
None	No IPR available	PANTHER	PTHR23310	ACYL-COA-BINDING PROTEIN, ACBP	coord: 2..85
None	No IPR available	PANTHER	PTHR23310:SF67	SUBFAMILY NOT NAMED	coord: 2..85
IPR022408	Acyl-CoA-binding protein, ACBP, conserved site	PROSITE	PS00880	ACB_1	coord: 18..36
IPR035984	Acyl-CoA binding protein superfamily	SUPERFAMILY	SSF47027	Acyl-CoA binding protein	coord: 2..81

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg16284	Cla008874	Watermelon (97103) v1	carwmB0678
Carg16284	Csa3G004510	Cucumber (Chinese Long) v2	carcuB0701
Carg16284	MELO3C013788	Melon (DHL92) v3.5.1	carmeB0681
Carg16284	ClCG10G000940	Watermelon (Charleston Gray)	carwcgB0655
Carg16284	CSPI03G00970	Wild cucumber (PI 183967)	carcpiB0713
Carg16284	Cucsa.322400	Cucumber (Gy14) v1	carcgyB0759
Carg16284	CmaCh06G005980	Cucurbita maxima (Rimu)	carcmaB0957
Carg16284	CmaCh16G012220	Cucurbita maxima (Rimu)	carcmaB0956
Carg16284	CmoCh06G006040	Cucurbita moschata (Rifu)	carcmoB0933
Carg16284	CmoCh16G012650	Cucurbita moschata (Rifu)	carcmoB0932
Carg16284	Cp4.1LG14g10020	Cucurbita pepo (Zucchini)	carcpeB0955
Carg16284	Cp4.1LG08g09030	Cucurbita pepo (Zucchini)	carcpeB0957
Carg16284	CsGy3G000910	Cucumber (Gy14) v2	carcgybB0677
Carg16284	MELO3C031937.2	Melon (DHL92) v3.6.1	carmedB0693
Carg16284	CsaV3_3G001010	Cucumber (Chinese Long) v3	carcucB0715
Carg16284	Cla97C10G185550	Watermelon (97103) v2	carwmbB0705
Carg16284	BhiUN179G7	Wax gourd	carwgoB0798

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg16284	Carg19492	Silver-seed gourd	carcarB442

The following block(s) are covering this gene:


Gene	Organism	Block
Carg16284	Bottle gourd (USVL1VR-Ls)	carlsiB621