Cp4.1LG08g04180 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG08g04180
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Prefoldin subunit 2 family protein
Location	Cp4.1LG08 : 1697950 .. 1703131 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTAGTATTTTATTTTATTTTAAATATTCTTTTTTTACTATAATTATTTTAATAAAATAATTATCTAGTAAAAAACTATGGGATTTTTTTTAATAATAATTGAACATCTTAGGTCAAGTCCCAAACTGCCCTCGCGAAGTGACCCAATTGCCTCACTTTCACCTTCCGCTGTTCGCAGTCTCGCAGCAGCTTGCGCGCGTCGCCCCTCCGAATCGCTCACCACTTGGCTTCACTCCGAGCACCGGTTAACGGCGTTGATCAAGTACTATTCCCTTCCATACACTATTTTTTAAGTTTGCGATCGAATGCTTTTAATTTCTTTGCGGATCATGCACCTGTTTTGCTTGCGGCTTCGACTGAGATTAGGTTTTGGTATCTGTTTTATTTTGTGCTTGGACTTATACCGGGGGTTCGTCTTTAAGTTGGTTGTTAAATATTCTTTAGCAGAAATTTGGAGTAGTTGCTTTTGTTTTGAAATTTGGCCTTCCTCGTGCTGACTGCTGTGTTTTTGTATATTGGCGCCAAAACCTTTTGGCTCAGCTCACAGCTGTTTGAGCAACTGTATTTTCTTTATGATATTTCTCTGAAATTAGAGTCTCAGGTGCTTGTTTGTTGTATTATGAACTATAGTAGATGGTGGTTTCAGATTTTATTCCAACATATCGAGCTAGAACTCAATTCACTATTCAACGGTTCTGGCTTCATATTGTATTGCGCTTTTAAACTGTGGTTGAACCTAGAGTACTCTTCTTTTACTTTCCTTTCCGTTGTTAGTATTGTTTTTGTCCTTATTCAATGAAATTACGAGGTTTTGTTGGTAAATGACTAGTAATTGGGGGATGGGTTGTGGTGATATCAGACTATGGTTTAGCTGTTTTTTTAAAAATGAACTGTGAAGGTTATCTATAGGTTTAAGTTATCAAGGAAGTTGTCTTATTTAAAATTCAACTTCATGATTTTAATCCCATCTATGCCAAAAGTGGATTTCCGGCCTTCCTACATTGTGAGCAGGGGAGAAGGAAGTCTGTGCGGTCTGCAAAGCCAGATTCTTAGTTTGATTTGAGGGATATCTGTACTGGCCATTTCTTATGCTTAATTGACTTTCACCACTGGGATTGGATTTCTGACCACCATGGATGAAATGTAAGGAGAGTTTTTTTGGATTGGTTTGCTTTTCTGGATTTAACCAATCCACCCAAATTGCAAATTAGATGCAATTTTAGGAATTAAGACATTTATGAGTTTCCCTCCTACGTCAAATTCAATTGAACAAAGTTAATTGTGGAAGTTTACAACATCAATCATGCAGCCCATCTGTTTGATGCTTTGCTTCTACGAGTTAATTCATTCACTACGGGTTTTATTGTGTTTTTGTCCTAGGCATTTGATATTCATGTAAATTGGTGGTCAGGATCCTTGGTTGTTCAAAATTTAAAGTGGCTTCATGTTCTTAAGGAGAGGATTTTCTTTAATTAGCCCTCACTTTGTATTGAGGGCCTGCGGTTTTGGCTCAAAAGCATTAGCCAAGGGAATCCTTGGAAGCGAGAATGAAAGGGTAGCTCATTCAGATAGCATTGTAAATGGTTCATCCATGCCTCAGCCATCTCCACTGTTTCCTGAGGGTAAACCTCATTCGGTTGCTTATGATGTTGAACTTATAGACGATGATACTTGGGCAGTTTCATTTGGTTTAGCTCGAGCATGGGAAGGGAGAGAGAAGGGCTCATCTGGCTTTGATAATAGATACTTCTTAGAGGATGAAGATCATGATCCAATTGATTATTGTGATTCAGAGTTTGATGATATTGACAACATGAGAATCCGGGGAAATCTCTTCTATAAACTTGATCGAGGTTCCAAAGAGTTTGAAGAATCTAGCTTTGATTTTCATCGGAAGAAAAAATCTATAAAGGAAAGGGAAGATACGCAGCAAAACAAAAGTAAAGTCAATGATAAACCCAATAATCATTTGGCAAGTGGCCATGTAAAGCTTCCTGAACATTTGAAGAACAAATATGTAATAATTGAAAGGGAGGAGAACAATGACTTTGAGAAGAAGCTTAGGACACCCACGTTTAATCAGCTTACTGCCCCTTACCATGAGCCATTTTGTCTTGATATATACATATCAAAAGCCTCTGTTCGAGCCTGCATCATTCACCGGGGCACCAGTAAGGTGGTTGCTGTGGCACATTCAATTTCTAAGGACATGAAATTTGACCTGACTTCAAGGAAGGATTCCTCTGCCTGTGCTGCTGTGGGGGCTGTTTTGGCCCAGAGAGCATTGGCTGATGATATCCACAATCTGGTATACACTCCAAGAAAAGGCGAGAGGATAGAAGGGAAGCTTCAAATCGTGCTTCAGTCTGTCATTGATAATGGGATTAATGTGAAAGTAAAGATTAAGCAGCAAAAGAGACCCAGAAAAGTTGGAAAGCCACCTTTAGCATAAGTCGGATGAAGAAAGATCATGAGGTTGCCCTTTTGACGTAAGACAACTTCCTTGATATACTGAGTAATATTGTTATAGATCCCCCCCTCTGTCATGATCTTATTTATACTTTCTGTGAGATTATTGATTTTGCTTTTCTATTGTCGAGATGTTTGAGTATATAAAGTTAAACAATTTCTTTTCTGAAATAAAACCCTTGTACAGTTTTCGATCTTGTTTAAAATCAAGGGTGCAACCATACTCATGTAGTACCACAAGTATACTGTTGGCTCAAGAAAACCTTCACATGTACCCTCATCACCCTCTGTCTTGCGCTTTCTACATCTGTTAAGACGAATGTGATCTCATCCTCCAACAGAGAGCCATTCCTTGCAAATCATCTCAATGATCACACACATACAACCCACGCTAGAATTTTTGGTATTGGGAGTTGCCATCCTCCGTCAAAGAGCCATTCCTTGCAAAACCAATCCATGATCACACACATACACAACTCACGCTAGAATTTTTGGTGTTGGGAGTTGTGTTGGATATTTCATGCGTGGATGAATGTTTAAAGTAATTCTACTAGTTTCTTAAGTTGTTTACCAAGTTTCTACCACATTACAGATCAAAATGGCAAGCGCAAGTGAGAGTGAACGCAAGGAACCCGTAAATGAGCAAATGGTTGCAAACATGTACGGTGCTTTAAGGTCTGAACTCAATCAGATATATTCAAAAATCACAGAACTCGAAATGGAAGCGAGTGAGCACTCTCTTGTCATTTCTGCAATCGAACCACTTGATCCATCAAGAAGATGCTACAGAATGATTGGGGGAGTGCTGGTGGAAAGAACTATCAAGGAGGTTCTGCCCGCCGTTCAACGCAACAAAGAGGGAATCGAGGAGGTCATTTCCAGACTCAATGAGGCCTTGGAGAAGAAAAAGAAGGAGATTGCTGACTTGGAGGCCAAATACAAGATCAAGATTAGAAAGCCTGATGGCGAGGCTAAGGAGGAAGACAGTGGGCGGAAAGAAGGTGCAGCTCAAGGAGTCCTCGTAGGCCCTGCAGGTGAAAACTAAACCCAACCCCATCGTGAACTTTAATCATATTCTTGTAGTGCTAAACCTTAAAGTTTCATCCAGATGGTTCACTGCTATAATGCATATTTGTGTGAAATTTTGTTTAAACTTTCAGTTCAATAGGAAGATTCAGAACCTTTTTGGTACATAGATGATTTTGAGGGAAAAGATTGAATGGGAACTAACTTTTTAGTGTTATGATATTGAAAATTTTCTGAGTCTTAGATTACCTCTTCACCAATTCATTAGTTTGATTGTGTTGCAATGAATTCTGTACTCAGAGCTTTCAGATTCAACCTTTCTACCTTGCTACATGAAACCACAAAGTAGTCTCTTTGAATAGAACCCATTGGAATCTCTTAAATTTGCAGAGTTTACATCTCATGTATGGAAGCCTCCCTATCCTCTCTCAGCTATAGGAATCCCGAACTCCTTTTTCGACCAAAACTCGGTCCGATATCTGAAGAATAGACGTGAATATTTAATTCTCATTCATAATTGTTCATATTATCACCATTGCCAAATTGGCAAAGCTATCTCTATCTAGGGATAAATGAAGTTAAATCTTGAAGTATTGAGCCACCAAATGAGGCACTGATGATAAAATATACATACTTTACTCCAACATCATAGAGTAAAATATGGTAATTACATAAAACATACTCCAAACCAAACCCTAAATGTTTGATAGTAAATCAAATTAGTGGTCTTAAAACAAAAATATGCATAAAAATACTCAAAGAATGTCTGACTTTACAGATGCCCTCTTGAAATCTCTCTTAGGATCCTCTTCTCCTTGTCCCCTTTACTCCATAATGAAACAAAACTCCTTTCAAATCTCTCTCTCATGATATTGGGTTTATCAAAGCTGCCATGCTTACTTATATAGCCCCAAGTATATAATTTCTGGATGGATTTTGCCTCAATGACCCATTTCAATACCTTTCAATACTCAACAAACATTTCACCCCAGAACCTCGGAAAAGCCATCTTTTTCTCAACAATGTTTTTGTTATTTGATCCAATAGCGTTCCGTTAGATAGGAACAGATTTGATAAATACTGATAACTTTCGGATGGAGTATTAGAACAGAAAAATCCATTAGATAATGAACTATTAGTTCTAAGCCATCTCTGGTGATGAATCAACAATCCGAAGTACTTTTCTTACATATTATTGATAAACCAGCGTTTATATATACATATGAGAGGATCTGTTTGGGAAGTAAGCAGCCCCTTTGACATCTCTTCGTCTGCAAAGAATTCTCGATGCGAAAACACATAGACAAAAGGCTAATATTTGAGTAGGAAAAAGAGTGGATAGGCAGGATCCCAAATGAATTGACGTATTCGAAAAAAGTCTTGTTCGTTGGAAAATCTATCTTGTGTCTAGTATGCAGTAATGTGCAAACGAGTTAGATCGAAAAAAACATTAAGCTTATAGGAATGAATGAGTTAAAAAAATAAATTCATATCAAAATCAAATAGGTAGAGTCAAGTATCAGGAAATTTAGAAAAAAAAAGTCGAACTCGAAATCATAGAAATGAGAATGAAAGCGTTTCTATTTGAGTACTAACTAGAATTGAGATGCATCAAATTTTCACACNAATAACTTTTTTTTTTTTTTTTTTTTAATCTTTAGACTATCAATATTTAGTTGAATAA

mRNA sequence

ATGATTAGTCAAGTCCCAAACTGCCCTCGCGAAGTGACCCAATTGCCTCACTTTCACCTTCCGCTGTTCGCAGTCTCGCAGCAGCTTGCGCGCGTCGCCCCTCCGAATCGCTCACCACTTGGCTTCACTCCGAGCACCGAGTCTCAGATGGTGGTTTCAGATTTTATTCCAACATATCGAGCTAGAACTCAATTCACTATTCAACGGGCCTGCGGTTTTGGCTCAAAAGCATTAGCCAAGGGAATCCTTGGAAGCGAGAATGAAAGGGTAGCTCATTCAGATAGCATTGTAAATGGTTCATCCATGCCTCAGCCATCTCCACTGTTTCCTGAGGGTAAACCTCATTCGGTTGCTTATGATGTTGAACTTATAGACGATGATACTTGGGCAGTTTCATTTGGTTTAGCTCGAGCATGGGAAGGGAGAGAGAAGGGCTCATCTGGCTTTGATAATAGATACTTCTTAGAGGATGAAGATCATGATCCAATTGATTATTGTGATTCAGAGTTTGATGATATTGACAACATGAGAATCCGGGGAAATCTCTTCTATAAACTTGATCGAGGTTCCAAAGAGTTTGAAGAATCTAGCTTTGATTTTCATCGGAAGAAAAAATCTATAAAGGAAAGGGAAGATACGCAGCAAAACAAAAGTAAAGTCAATGATAAACCCAATAATCATTTGGCAAGTGGCCATGTAAAGCTTCCTGAACATTTGAAGAACAAATATGTAATAATTGAAAGGGAGGAGAACAATGACTTTGAGAAGAAGCTTAGGACACCCACGTTTAATCAGCTTACTGCCCCTTACCATGAGCCATTTTGTCTTGATATATACATATCAAAAGCCTCTGTTCGAGCCTGCATCATTCACCGGGGCACCAGTAAGGTGGTTGCTGTGGCACATTCAATTTCTAAGGACATGAAATTTGACCTGACTTCAAGGAAGGATTCCTCTGCCTGTGCTGCTGTGGGGGCTGTTTTGGCCCAGAGAGCATTGGCTGATGATATCCACAATCTGGTATACACTCCAAGAAAAGGCGAGAGGATAGAAGGGAAGCTTCAAATCGTGCTTCAGTCTGTCATTGATAATGGGATTAATGTGAAAGTAAAGATTAAGCAGCAAAAGAGACCCAGAAAAATCAAAATGGCAAGCGCAAGTGAGAGTGAACGCAAGGAACCCGTAAATGAGCAAATGGTTGCAAACATGTACGGTGCTTTAAGGTCTGAACTCAATCAGATATATTCAAAAATCACAGAACTCGAAATGGAAGCGAGTGAGCACTCTCTTGTCATTTCTGCAATCGAACCACTTGATCCATCAAGAAGATGCTACAGAATGATTGGGGGAGTGCTGGTGGAAAGAACTATCAAGGAGGTTCTGCCCGCCGTTCAACGCAACAAAGAGGGAATCGAGGAGGTCATTTCCAGACTCAATGAGGCCTTGGAGAAGAAAAAGAAGGAGATTGCTGACTTGGAGGCCAAATACAAGATCAAGATTAGAAAGCCTGATGGCGAGGCTAAGGAGGAAGACAGTGGGCGGAAAGAAGGTGCAGCTCAAGGAGTCCTCGTAGGCCCTGCAGACTATCAATATTTAGTTGAATAA

Coding sequence (CDS)

ATGATTAGTCAAGTCCCAAACTGCCCTCGCGAAGTGACCCAATTGCCTCACTTTCACCTTCCGCTGTTCGCAGTCTCGCAGCAGCTTGCGCGCGTCGCCCCTCCGAATCGCTCACCACTTGGCTTCACTCCGAGCACCGAGTCTCAGATGGTGGTTTCAGATTTTATTCCAACATATCGAGCTAGAACTCAATTCACTATTCAACGGGCCTGCGGTTTTGGCTCAAAAGCATTAGCCAAGGGAATCCTTGGAAGCGAGAATGAAAGGGTAGCTCATTCAGATAGCATTGTAAATGGTTCATCCATGCCTCAGCCATCTCCACTGTTTCCTGAGGGTAAACCTCATTCGGTTGCTTATGATGTTGAACTTATAGACGATGATACTTGGGCAGTTTCATTTGGTTTAGCTCGAGCATGGGAAGGGAGAGAGAAGGGCTCATCTGGCTTTGATAATAGATACTTCTTAGAGGATGAAGATCATGATCCAATTGATTATTGTGATTCAGAGTTTGATGATATTGACAACATGAGAATCCGGGGAAATCTCTTCTATAAACTTGATCGAGGTTCCAAAGAGTTTGAAGAATCTAGCTTTGATTTTCATCGGAAGAAAAAATCTATAAAGGAAAGGGAAGATACGCAGCAAAACAAAAGTAAAGTCAATGATAAACCCAATAATCATTTGGCAAGTGGCCATGTAAAGCTTCCTGAACATTTGAAGAACAAATATGTAATAATTGAAAGGGAGGAGAACAATGACTTTGAGAAGAAGCTTAGGACACCCACGTTTAATCAGCTTACTGCCCCTTACCATGAGCCATTTTGTCTTGATATATACATATCAAAAGCCTCTGTTCGAGCCTGCATCATTCACCGGGGCACCAGTAAGGTGGTTGCTGTGGCACATTCAATTTCTAAGGACATGAAATTTGACCTGACTTCAAGGAAGGATTCCTCTGCCTGTGCTGCTGTGGGGGCTGTTTTGGCCCAGAGAGCATTGGCTGATGATATCCACAATCTGGTATACACTCCAAGAAAAGGCGAGAGGATAGAAGGGAAGCTTCAAATCGTGCTTCAGTCTGTCATTGATAATGGGATTAATGTGAAAGTAAAGATTAAGCAGCAAAAGAGACCCAGAAAAATCAAAATGGCAAGCGCAAGTGAGAGTGAACGCAAGGAACCCGTAAATGAGCAAATGGTTGCAAACATGTACGGTGCTTTAAGGTCTGAACTCAATCAGATATATTCAAAAATCACAGAACTCGAAATGGAAGCGAGTGAGCACTCTCTTGTCATTTCTGCAATCGAACCACTTGATCCATCAAGAAGATGCTACAGAATGATTGGGGGAGTGCTGGTGGAAAGAACTATCAAGGAGGTTCTGCCCGCCGTTCAACGCAACAAAGAGGGAATCGAGGAGGTCATTTCCAGACTCAATGAGGCCTTGGAGAAGAAAAAGAAGGAGATTGCTGACTTGGAGGCCAAATACAAGATCAAGATTAGAAAGCCTGATGGCGAGGCTAAGGAGGAAGACAGTGGGCGGAAAGAAGGTGCAGCTCAAGGAGTCCTCGTAGGCCCTGCAGACTATCAATATTTAGTTGAATAA

Protein sequence

MISQVPNCPREVTQLPHFHLPLFAVSQQLARVAPPNRSPLGFTPSTESQMVVSDFIPTYRARTQFTIQRACGFGSKALAKGILGSENERVAHSDSIVNGSSMPQPSPLFPEGKPHSVAYDVELIDDDTWAVSFGLARAWEGREKGSSGFDNRYFLEDEDHDPIDYCDSEFDDIDNMRIRGNLFYKLDRGSKEFEESSFDFHRKKKSIKEREDTQQNKSKVNDKPNNHLASGHVKLPEHLKNKYVIIEREENNDFEKKLRTPTFNQLTAPYHEPFCLDIYISKASVRACIIHRGTSKVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRALADDIHNLVYTPRKGERIEGKLQIVLQSVIDNGINVKVKIKQQKRPRKIKMASASESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSRRCYRMIGGVLVERTIKEVLPAVQRNKEGIEEVISRLNEALEKKKKEIADLEAKYKIKIRKPDGEAKEEDSGRKEGAAQGVLVGPADYQYLVE

Homology

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BLAST of Cp4.1LG08g04180 vs. Swiss-Prot
Match: PFD2_ARATH (Probable prefoldin subunit 2 OS=Arabidopsis thaliana GN=At3g22480 PE=2 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 9.2e-42
Identity = 98/146 (67.12%), Postives = 116/146 (79.45%), Query Frame = 1


Query: 383 MASASESER-KEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPS 442
           MAS S S   +EP NEQ V NMY   RSEL+QIYS IT+LEM+ SEHSLVI+AI+PLD S
Sbjct: 1   MASKSGSGGLREPPNEQAVLNMYEGKRSELSQIYSNITDLEMQVSEHSLVINAIQPLDQS 60

Query: 443 RRCYRMIGGVLVERTIKEVLPAVQRNKEGIEEVISRLNEALEKKKKEIADLEAKYKIKIR 502
           R+C+RMIGGVLVERTIKEVLPAVQRNK+G+EEV+ +L E LEKKKK++ + EAKYKI+I 
Sbjct: 61  RKCFRMIGGVLVERTIKEVLPAVQRNKDGLEEVVRKLYETLEKKKKDLTEFEAKYKIRIT 120

Query: 503 KPDGEAKEEDSGRKEGAAQGVLVGPA 528
           K   E  +E   +KEG AQGVLVG A
Sbjct: 121 KQ--EDNKEGGNKKEGNAQGVLVGAA 144

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BLAST of Cp4.1LG08g04180 vs. Swiss-Prot
Match: PFD2_DICDI (Probable prefoldin subunit 2 OS=Dictyostelium discoideum GN=pfdn2 PE=3 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 1.4e-21
Identity = 53/112 (47.32%), Postives = 82/112 (73.21%), Query Frame = 1


Query: 389 SERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSRRCYRMI 448
           S++K+ + E  +   Y  L+S+  QI S+I+E E +  E+ LVI+AI+ L+ +R+C+RM+
Sbjct: 2   SQQKQQLTENQIIEHYKDLKSQQQQIISRISEFESDVGEYGLVINAIQNLESNRKCFRMV 61

Query: 449 GGVLVERTIKEVLPAVQRNKEGIEEVISRLNEALEKKKKEIADLEAKYKIKI 501
           GGVLVERT+ EVLP +++N++GI+EV+ +L+E L  K KE+ D  A YKIKI
Sbjct: 62  GGVLVERTVGEVLPQIKQNRDGIKEVVKKLDENLSIKTKELNDFVALYKIKI 113

[Close]

BLAST of Cp4.1LG08g04180 vs. Swiss-Prot
Match: PFD2_HUMAN (Prefoldin subunit 2 OS=Homo sapiens GN=PFDN2 PE=1 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 1.8e-21
Identity = 62/144 (43.06%), Postives = 90/144 (62.50%), Query Frame = 1


Query: 385 SASESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSRRC 444
           S+     K  V+ + V   +  LR E   + SK  ELEME +EHSLVI  ++ +D +R+C
Sbjct: 11  SSGSGAGKGAVSAEQVIAGFNRLRQEQRGLASKAAELEMELNEHSLVIDTLKEVDETRKC 70

Query: 445 YRMIGGVLVERTIKEVLPAVQRNKEGIEEVISRLNEALEKKKKEIADLEAKYKIKI---- 504
           YRM+GGVLVERT+KEVLPA++ NKE I+++I  L + L+ K KE+ +   K+ I++    
Sbjct: 71  YRMVGGVLVERTVKEVLPALENNKEQIQKIIETLTQQLQAKGKELNEFREKHNIRLMGED 130

Query: 505 RKPDGEAKEEDSGRKEGAAQGVLV 525
            KP  +   E +G K  +A GVLV
Sbjct: 131 EKPAAKENSEGAGAKASSA-GVLV 153

[Close]

BLAST of Cp4.1LG08g04180 vs. Swiss-Prot
Match: PFD2_BOVIN (Prefoldin subunit 2 OS=Bos taurus GN=PFDN2 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 1.8e-21
Identity = 62/144 (43.06%), Postives = 90/144 (62.50%), Query Frame = 1


Query: 385 SASESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSRRC 444
           S+     K  V+ + V   +  LR E   + SK  ELEME +EHSLVI  ++ +D +R+C
Sbjct: 11  SSGSGTGKGAVSAEQVIAGFNRLRQEQRGLASKAAELEMELNEHSLVIDTLKEVDETRKC 70

Query: 445 YRMIGGVLVERTIKEVLPAVQRNKEGIEEVISRLNEALEKKKKEIADLEAKYKIKI---- 504
           YRM+GGVLVERT+KEVLPA++ NKE I+++I  L + L+ K KE+ +   K+ I++    
Sbjct: 71  YRMVGGVLVERTVKEVLPALENNKEQIQKIIETLTQQLQAKGKELNEFREKHNIRLMGED 130

Query: 505 RKPDGEAKEEDSGRKEGAAQGVLV 525
            KP  +   E +G K  +A GVLV
Sbjct: 131 EKPAAKENSEGAGAKASSA-GVLV 153

[Close]

BLAST of Cp4.1LG08g04180 vs. Swiss-Prot
Match: PFD2_RAT (Prefoldin subunit 2 OS=Rattus norvegicus GN=Pfdn2 PE=2 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 2.3e-21
Identity = 62/144 (43.06%), Postives = 90/144 (62.50%), Query Frame = 1


Query: 385 SASESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSRRC 444
           S      K  V+ + V   +  LR E   + SK  ELEME +EHSLVI  ++ +D +R+C
Sbjct: 11  SGGSGTGKGAVSAEQVIAGFNRLRQEQRGLASKAAELEMELNEHSLVIDTLKEVDETRKC 70

Query: 445 YRMIGGVLVERTIKEVLPAVQRNKEGIEEVISRLNEALEKKKKEIADLEAKYKIKI---- 504
           YRM+GGVLVERT+KEVLPA++ NKE I+++I  L++ L+ K KE+ +   K+ I++    
Sbjct: 71  YRMVGGVLVERTVKEVLPALEGNKEQIQKIIETLSQQLQAKGKELNEFREKHNIRLMGED 130

Query: 505 RKPDGEAKEEDSGRKEGAAQGVLV 525
            KP  +   E +G K  +A GVLV
Sbjct: 131 EKPAAKENSEGAGAKSSSA-GVLV 153

[Close]

BLAST of Cp4.1LG08g04180 vs. TrEMBL
Match: A0A0A0KSG6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G638320 PE=4 SV=1)

HSP 1 Score: 510.4 bits (1313), Expect = 2.7e-141
Identity = 261/315 (82.86%), Postives = 282/315 (89.52%), Query Frame = 1


Query: 67  IQRACGFGSKALAKGILGSENERVAHSDSIVNGSSMPQPSPLFPEGKPHSVAYDVELIDD 126
           + RAC F SKA   G +GSENERVAHS+SI NGS  PQ +PLFP+ KP SVAYDVEL+DD
Sbjct: 15  VLRACSFCSKAFPGGSIGSENERVAHSNSIANGSCRPQLTPLFPDDKPCSVAYDVELVDD 74

Query: 127 DTWAVSFGLARAWEGREKGSSGFDNRYFLEDEDHDPIDYCDSEFDDIDNMRIRGNLFYKL 186
           DTWAVS GLARAWE REKG SGF+NRY LEDE HDP+DYCDS+FDDIDNMRIRGNLFYKL
Sbjct: 75  DTWAVSCGLARAWEAREKGWSGFENRYSLEDEAHDPVDYCDSDFDDIDNMRIRGNLFYKL 134

Query: 187 DRGSKEFEESSFDFHRKKKSIKEREDTQQNKSKVNDKPNNHLASGHVKLPEHLKNKYVII 246
           D+ SKEFEE S DFHRKKKS+KE+ED  + +SKVNDK +  LASG VKLPEHLKNKYVI+
Sbjct: 135 DQASKEFEECSLDFHRKKKSLKEKEDMVKRRSKVNDKLDKCLASGQVKLPEHLKNKYVIV 194

Query: 247 EREENNDFEKKLRTPTFNQLTAPYHEPFCLDIYISKASVRACIIHRGTSKVVAVAHSISK 306
           ER EN+D EKKLRTPTFNQLT+PYHEPFCLDI+ISKASVRACIIHR TSKVVAVAHSISK
Sbjct: 195 ER-ENDDVEKKLRTPTFNQLTSPYHEPFCLDIFISKASVRACIIHRVTSKVVAVAHSISK 254

Query: 307 DMKFDLTSRKDSSACAAVGAVLAQRALADDIHNLVYTPRKGERIEGKLQIVLQSVIDNGI 366
           DMKFDLTSRKDSSACAAVGAVLAQRAL DDIHNL+YTPRKGERIEGKLQIVLQSVIDNGI
Sbjct: 255 DMKFDLTSRKDSSACAAVGAVLAQRALGDDIHNLIYTPRKGERIEGKLQIVLQSVIDNGI 314

Query: 367 NVKVKIKQQKRPRKI 382
           NV VKIKQQKRPRK+
Sbjct: 315 NVTVKIKQQKRPRKL 328

[Close]

BLAST of Cp4.1LG08g04180 vs. TrEMBL
Match: W9QM55_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_004462 PE=4 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 3.2e-86
Identity = 187/328 (57.01%), Postives = 233/328 (71.04%), Query Frame = 1


Query: 71  CGFGSKALAKGILGSENERVAHSDSIVNGSSMPQPSPLFPEGKP-HSVAYDVELIDDDTW 130
           CGF SKA+   +   EN      DS+ N SS    SPLFP+ KP H   YD+EL+D+D W
Sbjct: 23  CGFCSKAIPSSVFDKEN------DSVTNYSSNLHLSPLFPDAKPSHLSGYDIELVDNDAW 82

Query: 131 AVSFGLARAWEGREKGSSGFDNRYFLEDEDHDPIDYC-------DSEFDDIDNMRIRGNL 190
            +S GLA+AW  RE+ SS       L+ E  D +D         D +FDDIDNMRI GNL
Sbjct: 83  QLSSGLAQAW--REETSS------LLKKEIADSVDNNGSQLGKGDPDFDDIDNMRIHGNL 142

Query: 191 FYKLDRGSKEFEESSFDFHRKKKSIKEREDTQQNKSKVNDK-------PNNHLASGHVKL 250
           FYK+DR SKE+EE SFDFHR+KK  +++ D +++K K ND        P+   AS   KL
Sbjct: 143 FYKIDRDSKEYEEYSFDFHRRKKPSQKKNDPEESKRKQNDSNEAKRDSPSVTAASTGEKL 202

Query: 251 PEHLKNKYVII----EREENNDFEKKLRTPTFNQLTAPYHEPFCLDIYISKASVRACIIH 310
           P+    K  ++    + + ++  +KKLRTPTFNQLT PYHEPFCLDIYISKASVRACI+H
Sbjct: 203 PKVANEKCGLMSPLGKTDSSSVGKKKLRTPTFNQLTGPYHEPFCLDIYISKASVRACIVH 262

Query: 311 RGTSKVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRALADDIHNLVYTPRKGERIE 370
           R TSKVVAVAHSISKDMKFDL S ++ +AC AVG+VLAQRALADDIH++VYTPRKGER+E
Sbjct: 263 RVTSKVVAVAHSISKDMKFDLASTRNLAACEAVGSVLAQRALADDIHDVVYTPRKGERLE 322

Query: 371 GKLQIVLQSVIDNGINVKVKIKQQKRPR 380
           GKLQ+VLQS+IDNGIN+KVKIKQ+++ +
Sbjct: 323 GKLQVVLQSIIDNGINMKVKIKQRRQKK 336

[Close]

BLAST of Cp4.1LG08g04180 vs. TrEMBL
Match: M5XP25_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022034mg PE=4 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 2.3e-84
Identity = 189/329 (57.45%), Postives = 231/329 (70.21%), Query Frame = 1


Query: 73  FGSKALAKGILGSENERVAH-SDSIVNGSSMPQPSPLFP-EGKPHSVAYDVELIDDDTWA 132
           F S+A + G   +    + H S+ + N SS    SPLFP + KPHS +YD+EL+D D W 
Sbjct: 17  FLSRARSFGPKSNTTIPILHRSEQVSNYSSSFHLSPLFPSDAKPHSDSYDIELVDHDAWL 76

Query: 133 VSFGLARAWEGREKGSSGFDNRYFLEDEDHDPIDYC------DSEFDDIDNMRIRGNLFY 192
           VS GLA A  G E  +S  ++ Y  E+   +P+D C      D +FDDIDNMRIRG+LFY
Sbjct: 77  VSSGLALAGRGTEGTAS--ESSYLSEEVVDEPVDNCSLPVEGDPDFDDIDNMRIRGSLFY 136

Query: 193 KLDRGSKEFEESSFDFHRKKKSIKEREDTQQNKSKVN-------DKPNNHLASGHVKLPE 252
           KLDR SKEFEE +FDFHR+KKS K+++D ++ K K N       D P   L S   K   
Sbjct: 137 KLDRNSKEFEEYNFDFHRRKKSSKQKDDPKEIKRKSNELKESKTDSPIRDLFSRSEK-QG 196

Query: 253 HLKNKYVIIEREENNDFEKKLRTPTFNQLTAPYHEPFCLDIYISKASVRACIIHRGTSKV 312
            + N   + E +     +KKLRTPT+NQLT P+HEPFCLDIYISKASVRACIIHR TSKV
Sbjct: 197 RIANNSQLDEMDTACVGKKKLRTPTYNQLTGPFHEPFCLDIYISKASVRACIIHRVTSKV 256

Query: 313 VAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRALADDIHNLVYTPRKGERIEGKLQIV 372
           VAVAHSISKDMKFDL S ++++ACAAVGAVLAQRAL DDIH+++YTPRKGER+EGKLQIV
Sbjct: 257 VAVAHSISKDMKFDLGSTRNAAACAAVGAVLAQRALGDDIHDVIYTPRKGERLEGKLQIV 316

Query: 373 LQSVIDNGINVKVKIKQQKRPRKIKMASA 387
           LQS+IDNGINVKVK+KQ  R +     SA
Sbjct: 317 LQSIIDNGINVKVKLKQITRKKPSSSYSA 342

[Close]

BLAST of Cp4.1LG08g04180 vs. TrEMBL
Match: A0A059B3Z6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H03479 PE=4 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 1.4e-81
Identity = 180/309 (58.25%), Postives = 222/309 (71.84%), Query Frame = 1


Query: 75  SKALAKGILGSENERVAHSDSIVN-GSSMPQPSPLFPEGKPHSVAYDVELIDDDTWAVSF 134
           S+   KGI    +E V    +    G    Q SPLF E +P      +E++DDD W VS 
Sbjct: 32  SEVADKGIEKGRSELVDSGPTTTACGLERMQLSPLFAESRPSLDGCAIEVVDDDQWRVSA 91

Query: 135 GLARAWEGREKGSSGFDNRYFLEDE--DHDPIDYCDSEFDDIDNMRIRGNLFYKLDRGSK 194
           GLA+AW+G  +GS G +N     DE  DH      +++FD+IDNMRIRGNLFYK+D+ SK
Sbjct: 92  GLAQAWQG-PRGSLGTENLTETTDEHEDHSSSVEEEADFDEIDNMRIRGNLFYKIDKASK 151

Query: 195 EFEESSFDFHRKKKSIKEREDTQQNKSKVNDKPNNHLASGHVKLPEHLKNKYV--IIERE 254
           EFEE SF+FHRKK S K RED ++ K K     +  L + + KLP+  K K V  +++  
Sbjct: 152 EFEEYSFEFHRKK-SPKRREDPKETKKK----EDRGLITRNEKLPKAAKKKNVPSLLDGA 211

Query: 255 ENN--DFEKKLRTPTFNQLTAPYHEPFCLDIYISKASVRACIIHRGTSKVVAVAHSISKD 314
           E +    +KKLRTPTFNQLT PYHEPFCLDIYISKASVRACIIHR TSKVVAVAHSISKD
Sbjct: 212 EVDCTSNKKKLRTPTFNQLTGPYHEPFCLDIYISKASVRACIIHRATSKVVAVAHSISKD 271

Query: 315 MKFDLTSRKDSSACAAVGAVLAQRALADDIHNLVYTPRKGERIEGKLQIVLQSVIDNGIN 374
           MKFDL S +++ ACAAVG +LAQRALADDIH+++YTPRKGE++EGKL IVLQ+VIDNG+N
Sbjct: 272 MKFDLASTRNADACAAVGEILAQRALADDIHDIIYTPRKGEKLEGKLMIVLQAVIDNGVN 331

Query: 375 VKVKIKQQK 377
           VKVK+KQ+K
Sbjct: 332 VKVKLKQRK 334

[Close]

BLAST of Cp4.1LG08g04180 vs. TrEMBL
Match: V4RZ77_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005268mg PE=4 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 1.6e-80
Identity = 175/323 (54.18%), Postives = 221/323 (68.42%), Query Frame = 1


Query: 86  ENERVAHSDSIVNGSSMPQPSPLFPEGKPHSVAYDVELIDDDTWAVSFGLARAWEGREKG 145
           ENER   S S    SS    SPL     PH   Y+VEL+DD+TW VS GLA AW G ++ 
Sbjct: 42  ENERPTSSRSY---SSRTNLSPLLSSKGPHFGGYNVELVDDETWQVSAGLAHAWRGLDED 101

Query: 146 SSGFDNRYFLEDEDHDPIDYCDSEFDDIDNMRIRGNLFYKLDRGSKEFEESSFDFHR--- 205
                +   ++D+D       DS+FD+IDNMRIRG+LFYKLD+ SKEFEE SFDFHR   
Sbjct: 102 KEAKSDVNVVDDDDDATSFEGDSDFDEIDNMRIRGDLFYKLDKDSKEFEEYSFDFHRRKS 161

Query: 206 --------------------------KKKSIKEREDTQQNKSKVNDKPNNHLASGHVKLP 265
                                     KK+++K + D +++K K + +PN  LAS   +  
Sbjct: 162 SKTKEGNKDSEKKEASKAKTDKKECQKKEALKRKSDAKESKRKESPRPN--LASRDDEF- 221

Query: 266 EHLKNKYVIIEREENNDFEKKLRTPTFNQLTAPYHEPFCLDIYISKASVRACIIHRGTSK 325
               NK V+     +++ EK++RTPTFNQLTAPYHEPFCLDIYISKASVRACI+HR TSK
Sbjct: 222 ----NKIVM----SDDNVEKRVRTPTFNQLTAPYHEPFCLDIYISKASVRACIVHRVTSK 281

Query: 326 VVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRALADDIHNLVYTPRKGERIEGKLQI 380
           VV VAHSISKDMKFDL S ++++ACAAVG +LAQRALADDIH++VYTPRKGE++EGKLQI
Sbjct: 282 VVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRALADDIHDVVYTPRKGEKLEGKLQI 341

[Close]

BLAST of Cp4.1LG08g04180 vs. TAIR10
Match: AT3G22450.1 (AT3G22450.1 Ribosomal L18p/L5e family protein)

HSP 1 Score: 260.0 bits (663), Expect = 3.2e-69
Identity = 147/271 (54.24%), Postives = 190/271 (70.11%), Query Frame = 1


Query: 121 VELIDDDTWAVSFGLARAWEGREKGSSGFDNRYFLEDEDHDPIDYCDSEFDDIDNMRIRG 180
           +E +DDD W VS  L++AW  + +  +  ++   ++      +D  D + D+IDNMRIRG
Sbjct: 49  IETVDDDVWHVSSSLSQAWR-QFQADTAKNSPVTIQGVRETILDDEDPDHDEIDNMRIRG 108

Query: 181 NLFYKLDRGSKEFEESSFDFHRK------KKSIKEREDTQ---QNKSKVND--KPNNHLA 240
           +LF+KLDRGSKEFEE ++DFHRK      KK   + E+T+    NK +V D  K  N   
Sbjct: 109 DLFFKLDRGSKEFEEYNYDFHRKNQHKNAKKEQNQEEETKIKKDNKKEVRDEYKKRNDSF 168

Query: 241 SGHVKLPEHLKNKYVIIEREENNDFEKKLRTPTFNQLTAPYHEPFCLDIYISKASVRACI 300
           +G    P              N   +K+ RT TFNQLTAP+H PFCLDIYISK SVRAC+
Sbjct: 169 TGETDHP--------------NEAVKKRERTFTFNQLTAPFHYPFCLDIYISKESVRACV 228

Query: 301 IHRGTSKVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRALADDIHNLVYTPRKGER 360
           IHR TSKVV VAHSISKDMKFDL SR++ +ACAAVGAVLAQR+L DDIH+++YTPRKG++
Sbjct: 229 IHRVTSKVVTVAHSISKDMKFDLGSRRNVAACAAVGAVLAQRSLEDDIHDVIYTPRKGDK 288

Query: 361 IEGKLQIVLQSVIDNGINVKVKIKQQKRPRK 381
           IEGKLQ+VLQ++IDNG+NVKVK+KQ+K  +K
Sbjct: 289 IEGKLQVVLQALIDNGVNVKVKLKQRKLKKK 304

[Close]

BLAST of Cp4.1LG08g04180 vs. TAIR10
Match: AT3G22480.2 (AT3G22480.2 prefoldin 2)

HSP 1 Score: 172.9 bits (437), Expect = 5.2e-43
Identity = 98/146 (67.12%), Postives = 116/146 (79.45%), Query Frame = 1


Query: 383 MASASESER-KEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPS 442
           MAS S S   +EP NEQ V NMY   RSEL+QIYS IT+LEM+ SEHSLVI+AI+PLD S
Sbjct: 1   MASKSGSGGLREPPNEQAVLNMYEGKRSELSQIYSNITDLEMQVSEHSLVINAIQPLDQS 60

Query: 443 RRCYRMIGGVLVERTIKEVLPAVQRNKEGIEEVISRLNEALEKKKKEIADLEAKYKIKIR 502
           R+C+RMIGGVLVERTIKEVLPAVQRNK+G+EEV+ +L E LEKKKK++ + EAKYKI+I 
Sbjct: 61  RKCFRMIGGVLVERTIKEVLPAVQRNKDGLEEVVRKLYETLEKKKKDLTEFEAKYKIRIT 120

Query: 503 KPDGEAKEEDSGRKEGAAQGVLVGPA 528
           K   E  +E   +KEG AQGVLVG A
Sbjct: 121 KQ--EDNKEGGNKKEGNAQGVLVGAA 144

[Close]

BLAST of Cp4.1LG08g04180 vs. TAIR10
Match: AT1G08845.2 (AT1G08845.2 Ribosomal L18p/L5e family protein)

HSP 1 Score: 107.8 bits (268), Expect = 2.0e-23
Identity = 57/120 (47.50%), Postives = 80/120 (66.67%), Query Frame = 1


Query: 255 EKKLRTP----TFNQLTAPYHEPFCLDIYISKASVRACIIHRGTSKVVAVAHSISKDMKF 314
           EKK + P    +F Q T  Y EPF LD++ISK  V A + HR T + VAVA + SKD+K 
Sbjct: 112 EKKSKNPDKHVSFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTCRQVAVAGTNSKDVKA 171

Query: 315 DLTSRKDSSACAAVGAVLAQRALADDIHNLVYTPRKGERIEGKLQIVLQSVIDNGINVKV 371
            L SR D  AC ++G +L++RA   D++   YTPR  ++ EGK++ V+QS+IDNGI+VK+
Sbjct: 172 VLRSRCDIPACMSIGRILSERAKEADVYTASYTPRDQDKFEGKIRAVVQSLIDNGIDVKI 231

[Close]

BLAST of Cp4.1LG08g04180 vs. TAIR10
Match: AT3G20230.1 (AT3G20230.1 Ribosomal L18p/L5e family protein)

HSP 1 Score: 93.6 bits (231), Expect = 4.0e-19
Identity = 43/119 (36.13%), Postives = 78/119 (65.55%), Query Frame = 1


Query: 248 REENNDFEKKLRTPTFNQLTAPYHEPFCLDIYISKASVRACIIHRGTSKVVAVAHSISKD 307
           R    +  K+    ++ Q T  Y  PF L+++ S+  + A ++HR TSKV++VA + ++D
Sbjct: 65  RRSRGEAAKRPNRKSWKQRTDMYMRPFLLNVFFSRKFIHAKVMHRPTSKVISVATTNARD 124

Query: 308 MKFDLTSRKDSSACAAVGAVLAQRALADDIHNLVYTPRKGERIEGKLQIVLQSVIDNGI 367
           ++ ++ S  D+ AC  +G ++A+R++  D++ + Y PRKGERIEGKL IV+ ++ ++GI
Sbjct: 125 IRTNIPSLVDNEACRLIGKLIAERSMEADVYAVSYEPRKGERIEGKLGIVIDTIKEHGI 183

[Close]

BLAST of Cp4.1LG08g04180 vs. TAIR10
Match: AT5G27820.1 (AT5G27820.1 Ribosomal L18p/L5e family protein)

HSP 1 Score: 53.5 bits (127), Expect = 4.6e-07
Identity = 28/99 (28.28%), Postives = 53/99 (53.54%), Query Frame = 1


Query: 270 YHEPFCLDIYISKASVRACIIHRGTSKVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLA 329
           Y +P+ L ++ +   V A +IH  T+ V   A S  K ++  +   +D +A + +G +L 
Sbjct: 15  YLKPYVLKMHFTNKFVHAQVIHSPTATVACSASSQEKALRETMDITRDVAAASKIGKILG 74

Query: 330 QRALADDIHNLVYTPRKGERIEGKLQIVLQSVIDNGINV 369
           +R L  DI  +    +K +R  GK++ V+ SV + G+ +
Sbjct: 75  ERLLMKDIPAVTIQMKKEQRYHGKVKAVIDSVREAGVKL 113

[Close]

BLAST of Cp4.1LG08g04180 vs. NCBI nr
Match: gi|659118877|ref|XP_008459355.1| (PREDICTED: uncharacterized protein LOC103498514 [Cucumis melo])

HSP 1 Score: 515.4 bits (1326), Expect = 1.2e-142
Identity = 262/317 (82.65%), Postives = 287/317 (90.54%), Query Frame = 1


Query: 67  IQRACGFGSKALAKGILGSENERVAHSDSIVNGSSMPQPSPLFPEGKPHSVAYDVELIDD 126
           + RAC F SKA   G +GSENERVAHS+SI NGSS PQ +PLFP+ KP SVAYD+EL+DD
Sbjct: 15  VLRACSFCSKAFPGGSIGSENERVAHSNSIANGSSRPQLTPLFPDDKPRSVAYDIELVDD 74

Query: 127 DTWAVSFGLARAWEGREKGSSGFDNRYFLEDEDHDPIDYCDSEFDDIDNMRIRGNLFYKL 186
           DTWAVS GLARAWEGREKG SG +NRY LEDE HDP+DYCDS+FDDIDNMRIRGNLFYKL
Sbjct: 75  DTWAVSCGLARAWEGREKGWSGLENRYSLEDEAHDPVDYCDSDFDDIDNMRIRGNLFYKL 134

Query: 187 DRGSKEFEESSFDFHRKKKSIKEREDTQQNKSKVNDKPNNHLASGHVKLPEHLKNKYVII 246
           DRGSKEF+E S DFHRKKKSIKE+E+ ++++SKVNDK +  L SG VKLPEHLKNKYVI+
Sbjct: 135 DRGSKEFDEYSLDFHRKKKSIKEKENREKSRSKVNDKLDKCLPSGQVKLPEHLKNKYVIV 194

Query: 247 EREENNDFEKKLRTPTFNQLTAPYHEPFCLDIYISKASVRACIIHRGTSKVVAVAHSISK 306
           ER EN+D EKKLRTPTFNQLT  YHEPFCLDIYISKASVRACIIHR TSKVVAVAHSISK
Sbjct: 195 ER-ENDDVEKKLRTPTFNQLTGLYHEPFCLDIYISKASVRACIIHRVTSKVVAVAHSISK 254

Query: 307 DMKFDLTSRKDSSACAAVGAVLAQRALADDIHNLVYTPRKGERIEGKLQIVLQSVIDNGI 366
           DMKFDLTSRKDSSACAAVGAVLAQRALADDIHNL+YTPRKGERIEGKLQ+VLQSVIDNGI
Sbjct: 255 DMKFDLTSRKDSSACAAVGAVLAQRALADDIHNLIYTPRKGERIEGKLQVVLQSVIDNGI 314

Query: 367 NVKVKIKQQKRPRKIKM 384
           NVKVKIKQQKRPRK+++
Sbjct: 315 NVKVKIKQQKRPRKLEV 330

[Close]

BLAST of Cp4.1LG08g04180 vs. NCBI nr
Match: gi|778707360|ref|XP_011656005.1| (PREDICTED: uncharacterized protein LOC101213193 [Cucumis sativus])

HSP 1 Score: 510.4 bits (1313), Expect = 3.9e-141
Identity = 261/315 (82.86%), Postives = 282/315 (89.52%), Query Frame = 1


Query: 67  IQRACGFGSKALAKGILGSENERVAHSDSIVNGSSMPQPSPLFPEGKPHSVAYDVELIDD 126
           + RAC F SKA   G +GSENERVAHS+SI NGS  PQ +PLFP+ KP SVAYDVEL+DD
Sbjct: 15  VLRACSFCSKAFPGGSIGSENERVAHSNSIANGSCRPQLTPLFPDDKPCSVAYDVELVDD 74

Query: 127 DTWAVSFGLARAWEGREKGSSGFDNRYFLEDEDHDPIDYCDSEFDDIDNMRIRGNLFYKL 186
           DTWAVS GLARAWE REKG SGF+NRY LEDE HDP+DYCDS+FDDIDNMRIRGNLFYKL
Sbjct: 75  DTWAVSCGLARAWEAREKGWSGFENRYSLEDEAHDPVDYCDSDFDDIDNMRIRGNLFYKL 134

Query: 187 DRGSKEFEESSFDFHRKKKSIKEREDTQQNKSKVNDKPNNHLASGHVKLPEHLKNKYVII 246
           D+ SKEFEE S DFHRKKKS+KE+ED  + +SKVNDK +  LASG VKLPEHLKNKYVI+
Sbjct: 135 DQASKEFEECSLDFHRKKKSLKEKEDMVKRRSKVNDKLDKCLASGQVKLPEHLKNKYVIV 194

Query: 247 EREENNDFEKKLRTPTFNQLTAPYHEPFCLDIYISKASVRACIIHRGTSKVVAVAHSISK 306
           ER EN+D EKKLRTPTFNQLT+PYHEPFCLDI+ISKASVRACIIHR TSKVVAVAHSISK
Sbjct: 195 ER-ENDDVEKKLRTPTFNQLTSPYHEPFCLDIFISKASVRACIIHRVTSKVVAVAHSISK 254

Query: 307 DMKFDLTSRKDSSACAAVGAVLAQRALADDIHNLVYTPRKGERIEGKLQIVLQSVIDNGI 366
           DMKFDLTSRKDSSACAAVGAVLAQRAL DDIHNL+YTPRKGERIEGKLQIVLQSVIDNGI
Sbjct: 255 DMKFDLTSRKDSSACAAVGAVLAQRALGDDIHNLIYTPRKGERIEGKLQIVLQSVIDNGI 314

Query: 367 NVKVKIKQQKRPRKI 382
           NV VKIKQQKRPRK+
Sbjct: 315 NVTVKIKQQKRPRKL 328

[Close]

BLAST of Cp4.1LG08g04180 vs. NCBI nr
Match: gi|1009141421|ref|XP_015888185.1| (PREDICTED: uncharacterized protein LOC107423173 [Ziziphus jujuba])

HSP 1 Score: 333.2 bits (853), Expect = 8.5e-88
Identity = 184/309 (59.55%), Postives = 222/309 (71.84%), Query Frame = 1


Query: 82  ILGSENERVAHSDSIVNGSSMPQPSPLFPEGKPHSVAYDVELIDDDTWAVSFGLARAWEG 141
           ++  E E V H   +    S    SPLFP+ KP S  Y++EL+D D W +S GLA+AW+G
Sbjct: 32  VVNREAEVVTHFVPVAYYCSRLHLSPLFPDSKPSSNGYEIELVDHDAWRLSSGLAQAWQG 91

Query: 142 REKGSSGFDNRYFLEDEDHDPIDYC------DSEFDDIDNMRIRGNLFYKLDRGSKEFEE 201
            +  + G  +         + +D C      D +FD+IDNMRIRGNLFYKLDRGSKEFEE
Sbjct: 92  MDGAAMGTSSL------SEEVVDNCSQPGQEDPDFDEIDNMRIRGNLFYKLDRGSKEFEE 151

Query: 202 SSFDFHRKKKSIKEREDTQQNKSKVNDKPNNHLASGHVKLPEHLKNKYVII----EREEN 261
            SFDFHR KKS+K+++D    K K N+ P  ++AS   KLP+ L  K  ++    E E  
Sbjct: 152 YSFDFHRYKKSLKKKDDP---KEKKNESPRQNVASVSDKLPKVLNKKSGLMSPTDEIEST 211

Query: 262 NDFEKKLRTPTFNQLTAPYHEPFCLDIYISKASVRACIIHRGTSKVVAVAHSISKDMKFD 321
              +KKLR PTFNQLT PYHEPFCLDIYISKASVRACI+HR TSKVVAVAHSISKDMKFD
Sbjct: 212 CVGKKKLRAPTFNQLTGPYHEPFCLDIYISKASVRACIVHRATSKVVAVAHSISKDMKFD 271

Query: 322 LTSRKDSSACAAVGAVLAQRALADDIHNLVYTPRKGERIEGKLQIVLQSVIDNGINVKVK 381
           L S +DS ACAAVG VLAQRALADDIH+++YTPRKGER+EGKL  VLQS++DNGINVKVK
Sbjct: 272 LASTRDSVACAAVGTVLAQRALADDIHDVIYTPRKGERLEGKLHFVLQSIMDNGINVKVK 330

[Close]

BLAST of Cp4.1LG08g04180 vs. NCBI nr
Match: gi|703078547|ref|XP_010090920.1| (hypothetical protein L484_004462 [Morus notabilis])

HSP 1 Score: 327.4 bits (838), Expect = 4.6e-86
Identity = 187/328 (57.01%), Postives = 233/328 (71.04%), Query Frame = 1


Query: 71  CGFGSKALAKGILGSENERVAHSDSIVNGSSMPQPSPLFPEGKP-HSVAYDVELIDDDTW 130
           CGF SKA+   +   EN      DS+ N SS    SPLFP+ KP H   YD+EL+D+D W
Sbjct: 23  CGFCSKAIPSSVFDKEN------DSVTNYSSNLHLSPLFPDAKPSHLSGYDIELVDNDAW 82

Query: 131 AVSFGLARAWEGREKGSSGFDNRYFLEDEDHDPIDYC-------DSEFDDIDNMRIRGNL 190
            +S GLA+AW  RE+ SS       L+ E  D +D         D +FDDIDNMRI GNL
Sbjct: 83  QLSSGLAQAW--REETSS------LLKKEIADSVDNNGSQLGKGDPDFDDIDNMRIHGNL 142

Query: 191 FYKLDRGSKEFEESSFDFHRKKKSIKEREDTQQNKSKVNDK-------PNNHLASGHVKL 250
           FYK+DR SKE+EE SFDFHR+KK  +++ D +++K K ND        P+   AS   KL
Sbjct: 143 FYKIDRDSKEYEEYSFDFHRRKKPSQKKNDPEESKRKQNDSNEAKRDSPSVTAASTGEKL 202

Query: 251 PEHLKNKYVII----EREENNDFEKKLRTPTFNQLTAPYHEPFCLDIYISKASVRACIIH 310
           P+    K  ++    + + ++  +KKLRTPTFNQLT PYHEPFCLDIYISKASVRACI+H
Sbjct: 203 PKVANEKCGLMSPLGKTDSSSVGKKKLRTPTFNQLTGPYHEPFCLDIYISKASVRACIVH 262

Query: 311 RGTSKVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRALADDIHNLVYTPRKGERIE 370
           R TSKVVAVAHSISKDMKFDL S ++ +AC AVG+VLAQRALADDIH++VYTPRKGER+E
Sbjct: 263 RVTSKVVAVAHSISKDMKFDLASTRNLAACEAVGSVLAQRALADDIHDVVYTPRKGERLE 322

Query: 371 GKLQIVLQSVIDNGINVKVKIKQQKRPR 380
           GKLQ+VLQS+IDNGIN+KVKIKQ+++ +
Sbjct: 323 GKLQVVLQSIIDNGINMKVKIKQRRQKK 336

[Close]

BLAST of Cp4.1LG08g04180 vs. NCBI nr
Match: gi|596293289|ref|XP_007226643.1| (hypothetical protein PRUPE_ppa022034mg [Prunus persica])

HSP 1 Score: 321.2 bits (822), Expect = 3.3e-84
Identity = 189/329 (57.45%), Postives = 231/329 (70.21%), Query Frame = 1


Query: 73  FGSKALAKGILGSENERVAH-SDSIVNGSSMPQPSPLFP-EGKPHSVAYDVELIDDDTWA 132
           F S+A + G   +    + H S+ + N SS    SPLFP + KPHS +YD+EL+D D W 
Sbjct: 17  FLSRARSFGPKSNTTIPILHRSEQVSNYSSSFHLSPLFPSDAKPHSDSYDIELVDHDAWL 76

Query: 133 VSFGLARAWEGREKGSSGFDNRYFLEDEDHDPIDYC------DSEFDDIDNMRIRGNLFY 192
           VS GLA A  G E  +S  ++ Y  E+   +P+D C      D +FDDIDNMRIRG+LFY
Sbjct: 77  VSSGLALAGRGTEGTAS--ESSYLSEEVVDEPVDNCSLPVEGDPDFDDIDNMRIRGSLFY 136

Query: 193 KLDRGSKEFEESSFDFHRKKKSIKEREDTQQNKSKVN-------DKPNNHLASGHVKLPE 252
           KLDR SKEFEE +FDFHR+KKS K+++D ++ K K N       D P   L S   K   
Sbjct: 137 KLDRNSKEFEEYNFDFHRRKKSSKQKDDPKEIKRKSNELKESKTDSPIRDLFSRSEK-QG 196

Query: 253 HLKNKYVIIEREENNDFEKKLRTPTFNQLTAPYHEPFCLDIYISKASVRACIIHRGTSKV 312
            + N   + E +     +KKLRTPT+NQLT P+HEPFCLDIYISKASVRACIIHR TSKV
Sbjct: 197 RIANNSQLDEMDTACVGKKKLRTPTYNQLTGPFHEPFCLDIYISKASVRACIIHRVTSKV 256

Query: 313 VAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRALADDIHNLVYTPRKGERIEGKLQIV 372
           VAVAHSISKDMKFDL S ++++ACAAVGAVLAQRAL DDIH+++YTPRKGER+EGKLQIV
Sbjct: 257 VAVAHSISKDMKFDLGSTRNAAACAAVGAVLAQRALGDDIHDVIYTPRKGERLEGKLQIV 316

Query: 373 LQSVIDNGINVKVKIKQQKRPRKIKMASA 387
           LQS+IDNGINVKVK+KQ  R +     SA
Sbjct: 317 LQSIIDNGINVKVKLKQITRKKPSSSYSA 342

The following BLAST results are available for this feature:

BLAST of Cp4.1LG08g04180 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PFD2_ARATH	9.2e-42	67.12	Probable prefoldin subunit 2 OS=Arabidopsis thaliana GN=At3g22480 PE=2 SV=1	[more]
PFD2_DICDI	1.4e-21	47.32	Probable prefoldin subunit 2 OS=Dictyostelium discoideum GN=pfdn2 PE=3 SV=1	[more]
PFD2_HUMAN	1.8e-21	43.06	Prefoldin subunit 2 OS=Homo sapiens GN=PFDN2 PE=1 SV=1	[more]
PFD2_BOVIN	1.8e-21	43.06	Prefoldin subunit 2 OS=Bos taurus GN=PFDN2 PE=2 SV=1	[more]
PFD2_RAT	2.3e-21	43.06	Prefoldin subunit 2 OS=Rattus norvegicus GN=Pfdn2 PE=2 SV=1	[more]

BLAST of Cp4.1LG08g04180 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KSG6_CUCSA	2.7e-141	82.86	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G638320 PE=4 SV=1	[more]
W9QM55_9ROSA	3.2e-86	57.01	Uncharacterized protein OS=Morus notabilis GN=L484_004462 PE=4 SV=1	[more]
M5XP25_PRUPE	2.3e-84	57.45	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022034mg PE=4 SV=1	[more]
A0A059B3Z6_EUCGR	1.4e-81	58.25	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H03479 PE=4 SV=1	[more]
V4RZ77_9ROSI	1.6e-80	54.18	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005268mg PE=4 SV=1	[more]

BLAST of Cp4.1LG08g04180 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G22450.1	3.2e-69	54.24	Ribosomal L18p/L5e family protein	[more]
AT3G22480.2	5.2e-43	67.12	prefoldin 2	[more]
AT1G08845.2	2.0e-23	47.50	Ribosomal L18p/L5e family protein	[more]
AT3G20230.1	4.0e-19	36.13	Ribosomal L18p/L5e family protein	[more]
AT5G27820.1	4.6e-07	28.28	Ribosomal L18p/L5e family protein	[more]

BLAST of Cp4.1LG08g04180 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659118877\|ref\|XP_008459355.1\|	1.2e-142	82.65	PREDICTED: uncharacterized protein LOC103498514 [Cucumis melo]	[more]
gi\|778707360\|ref\|XP_011656005.1\|	3.9e-141	82.86	PREDICTED: uncharacterized protein LOC101213193 [Cucumis sativus]	[more]
gi\|1009141421\|ref\|XP_015888185.1\|	8.5e-88	59.55	PREDICTED: uncharacterized protein LOC107423173 [Ziziphus jujuba]	[more]
gi\|703078547\|ref\|XP_010090920.1\|	4.6e-86	57.01	hypothetical protein L484_004462 [Morus notabilis]	[more]
gi\|596293289\|ref\|XP_007226643.1\|	3.3e-84	57.45	hypothetical protein PRUPE_ppa022034mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation
GO:0006457	protein folding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005840	ribosome
GO:0005622	intracellular
GO:0016272	prefoldin complex

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome
GO:0051082	unfolded protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR009053	Prefoldin
IPR005484	Ribosomal_L18
IPR002777	PFD_beta-like

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006412	translation
cellular_component	GO:0016272	prefoldin complex
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005622	intracellular
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0051082	unfolded protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG08g04180.1	Cp4.1LG08g04180.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002777	Prefoldin beta-like	PFAM	PF01920	Prefoldin_2	coord: 398..501 score: 1.6
IPR005484	Ribosomal protein L18	PFAM	PF00861	Ribosomal_L18p	coord: 276..367 score: 4.
IPR009053	Prefoldin	GENE3D	G3DSA:1.10.287.370		coord: 400..496 score: 2.2
IPR009053	Prefoldin	unknown	SSF46579	Prefoldin	coord: 401..498 score: 1.11
None	No IPR available	unknown	Coil	Coil	coord: 404..424 score: -coord: 468..502 scor
None	No IPR available	GENE3D	G3DSA:3.30.420.100		coord: 272..367 score: 6.7
None	No IPR available	PANTHER	PTHR12899	39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL	coord: 126..386 score: 2.3E
None	No IPR available	PANTHER	PTHR12899:SF9	EXPRESSED PROTEIN	coord: 126..386 score: 2.3E
None	No IPR available	unknown	SSF53137	Translational machinery components	coord: 257..366 score: 3.66

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG08g04180	CmaCh14G017060	Cucurbita maxima (Rimu)	cmacpeB292
Cp4.1LG08g04180	CmaCh06G014120	Cucurbita maxima (Rimu)	cmacpeB853
Cp4.1LG08g04180	CmoCh14G017490	Cucurbita moschata (Rifu)	cmocpeB254
Cp4.1LG08g04180	CmoCh06G014140	Cucurbita moschata (Rifu)	cmocpeB796
Cp4.1LG08g04180	Cla021627	Watermelon (97103) v1	cpewmB845
Cp4.1LG08g04180	ClCG05G005160	Watermelon (Charleston Gray)	cpewcgB787
Cp4.1LG08g04180	Lsi05G016030	Bottle gourd (USVL1VR-Ls)	cpelsiB714
Cp4.1LG08g04180	Bhi01G000586	Wax gourd	cpewgoB1110
Cp4.1LG08g04180	Carg17417	Silver-seed gourd	carcpeB0861
Cp4.1LG08g04180	Carg23522	Silver-seed gourd	carcpeB1184

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG08g04180	Cp4.1LG03g10740	Cucurbita pepo (Zucchini)	cpecpeB482

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG08g04180	Cucurbita pepo (Zucchini)	cpecpeB192
Cp4.1LG08g04180	Cucurbita pepo (Zucchini)	cpecpeB194
Cp4.1LG08g04180	Cucurbita pepo (Zucchini)	cpecpeB342
Cp4.1LG08g04180	Cucumber (Gy14) v1	cgycpeB0687
Cp4.1LG08g04180	Cucurbita maxima (Rimu)	cmacpeB408
Cp4.1LG08g04180	Cucurbita maxima (Rimu)	cmacpeB931
Cp4.1LG08g04180	Cucurbita moschata (Rifu)	cmocpeB370
Cp4.1LG08g04180	Cucurbita moschata (Rifu)	cmocpeB373
Cp4.1LG08g04180	Cucurbita moschata (Rifu)	cmocpeB866
Cp4.1LG08g04180	Wild cucumber (PI 183967)	cpecpiB861
Cp4.1LG08g04180	Cucumber (Chinese Long) v2	cpecuB859
Cp4.1LG08g04180	Bottle gourd (USVL1VR-Ls)	cpelsiB697
Cp4.1LG08g04180	Bottle gourd (USVL1VR-Ls)	cpelsiB704
Cp4.1LG08g04180	Bottle gourd (USVL1VR-Ls)	cpelsiB716
Cp4.1LG08g04180	Watermelon (Charleston Gray)	cpewcgB762
Cp4.1LG08g04180	Watermelon (Charleston Gray)	cpewcgB788
Cp4.1LG08g04180	Watermelon (97103) v1	cpewmB823
Cp4.1LG08g04180	Watermelon (97103) v1	cpewmB841
Cp4.1LG08g04180	Watermelon (97103) v1	cpewmB853
Cp4.1LG08g04180	Melon (DHL92) v3.5.1	cpemeB813
Cp4.1LG08g04180	Cucumber (Gy14) v2	cgybcpeB454
Cp4.1LG08g04180	Melon (DHL92) v3.6.1	cpemedB951
Cp4.1LG08g04180	Silver-seed gourd	carcpeB0109
Cp4.1LG08g04180	Silver-seed gourd	carcpeB0456
Cp4.1LG08g04180	Cucumber (Chinese Long) v3	cpecucB1056
Cp4.1LG08g04180	Wax gourd	cpewgoB1120