CmoCh06G014140 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh06G014140
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Structural constituent of rib
Location	Cmo_Chr06 : 10294064 .. 10296315 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCTTAAGGAGAGGATTTTCTTTAATTAGCCCTCACTTTGTATTGAGGGCCTGCGGTTTTGGCTCAAAAGCATTAGCCAAGGGAATCCTTAGAAGCGAGAATGAAAGGGTAGCTCATTCAGATAGCATTGTAAATGGTTCATCCACGCCTCAGCCATCTCCACTGTTTCCTGAGAGTAAACCTCATTCGGTTGCTTATGATGTTGAACTTATAGACGATGATGCTTGGGCAGTTTCATTTGGTTTAGCTCGAGCATGGGAAGGGAGAGAGAAGGGCTCATCTGGCTTTGATAATAGATACTTCTTAGAGGATGAAGATCATGATCCAATTGATTATTGTGATTCAGAGTTTGATGATATTGACAACATGAGAATCCGGGGAAATCTCTTCTATAAACTTGATCGAGGTTCCAAAGAGTTTGAAGAATATAGCTTTGATTTTCATCGGAAGAAAAAATCTATAAAGGAAAAGGAAGATACGCAGCAAAACAAAAGCAAAGTCAATGATAAACCCAATAATCATTTGGCAAGTGGCCATGTAAAGCTTCCTGAACATGTGAAGAACAAATATGTAATAATTGAAAGGGAGGAGAACAATGACTTTGAGAAGAAGCTTAGGACACCCACGTTTAATCAGCTTACTGCCCCTTACCATGAGCCATTTTGTCTTGATATATACATATCAAAAGCCTCTGTTCGAGCCTGCATCATTCACCGGGGCACCAGTAAGGTGGTTGCTGTGGCACATTCAATTTCTAAGGACATGAAATTTGACCTGACTTCAAGGAAGGATTCCTCTGCCTGTGCTGCTGTGGGGGCTGTTTTGGCCCAGAGAGCATTGGCTGATGATATCCACAATCTGGTATACACTCCAAGAAAAGGCGAGAGGATAGAAGGGAAGCTTCAAATCGTGCTTCAGTCTGTCATTGATAATGGGATTAATGTGAAAGTAAAGATTAAGCAGCAAAAGAGACCCAGAAAAGTTGGAAAGCCACCTTTAGCATAAGTCGGATGAAGAAAGATCATGAGGTTGCCCTTTTGACGTAAGACAACTTCCTTGATATACTGAGTAATATTGTTATAGATCCCCCCCTCTGTCATGATCTTATTTATACTTTCTGTGAGATTATTGATTTTGCTTTTCTATTGTCGAGATGTTTGAGTACATAAAGTTAAACGATTTCTTTTCTGAAATAAAACCCTTGTACAGTTTTCAATCTTGTTTAAAATCAAGGGTGCAACCATACTCATGTAGAACCACGAGTATACTGTTGGCTCAAGAAAACTTTCACATGTACCCTCATCACCCTCTGTCTTGCGCTTTCTACATCTGTTAAGACGAATGTGATCTCATCCTCCAACAGAGAGCCATTCCTTCCAAATCATCTCAATGATCACACACATACAACCCACGCTAGAATTTTTGGTATTGGGAGTTGCCATCCTCCGTCAAAGAGCCATTCCTTGCAAAACCAATCCATGATCACACACATACACAACTCACGCTAGAATTTTTGGTGTTGGGAGTTGTGTTGGATATTTCATGCGTGGATGAATGTTAAAAGTAATTCTACTAGTTTCTTAAGTTGTTTACCAACTTTCTACCGCATTACAGATCAAAATGGCAAGCGCAAGTGAGAGTGAACGCAAGGAACCCGTAAATGAGCAAATGGTTGCAAACATGTACGGTGCTTTAAGGTCTGAGCTCAATCAGATATATTCAAAAATCACAGAACTCGAAATGGAAGCGAGTGAGCACTCTCTTGTCATTTCTGCAATCGAACCACTTGATCCATCAAGAAGATGCTACAGAATGATTGGGGGAGTGCTGGTGGAAAGAACTATCAAGGAGGTTCTGCCCGCCGTTCAACGCAACAAAGAGGGAATCGAGGAGGTCATTTCCAGACTCAATGAGGCCTTGGAGAAGAAAAAGAAGGAGATTGCTGACTTGGAGGCCAAATACAAGATCAAGATTAGAAAGCCTGATGGCGAGGCTAAGGAGGAAGACAGTGGGCGGAAAGAAGGTGCAGCTCAAGGAGTCCTCGTAGGCCCTGCAGGTGAAAACTAAACCCAACCCCATCGTGAACTTTAATCATATTCTTGTAGTGCTAAACCTTATAGTTTCATCCAGATGGTTCACTGCTATAATGCATATTTGTGTGAAATTTTGTTTAAACTTTCAGTTCAATAGGAAGATCCAGAACCTTTTTGGTACATAGATGATTTTGAGGGAAAAAATTGAATGGGAAC

mRNA sequence

ATGTTCTTAAGGAGAGGATTTTCTTTAATTAGCCCTCACTTTGTATTGAGGGCCTGCGGTTTTGGCTCAAAAGCATTAGCCAAGGGAATCCTTAGAAGCGAGAATGAAAGGGTAGCTCATTCAGATAGCATTGTAAATGGTTCATCCACGCCTCAGCCATCTCCACTGTTTCCTGAGAGTAAACCTCATTCGGTTGCTTATGATGTTGAACTTATAGACGATGATGCTTGGGCAGTTTCATTTGGTTTAGCTCGAGCATGGGAAGGGAGAGAGAAGGGCTCATCTGGCTTTGATAATAGATACTTCTTAGAGGATGAAGATCATGATCCAATTGATTATTGTGATTCAGAGTTTGATGATATTGACAACATGAGAATCCGGGGAAATCTCTTCTATAAACTTGATCGAGGTTCCAAAGAGTTTGAAGAATATAGCTTTGATTTTCATCGGAAGAAAAAATCTATAAAGGAAAAGGAAGATACGCAGCAAAACAAAAGCAAAGTCAATGATAAACCCAATAATCATTTGGCAAGTGGCCATGTAAAGCTTCCTGAACATGTGAAGAACAAATATGTAATAATTGAAAGGGAGGAGAACAATGACTTTGAGAAGAAGCTTAGGACACCCACGTTTAATCAGCTTACTGCCCCTTACCATGAGCCATTTTGTCTTGATATATACATATCAAAAGCCTCTGTTCGAGCCTGCATCATTCACCGGGGCACCAGTAAGGTGGTTGCTGTGGCACATTCAATTTCTAAGGACATGAAATTTGACCTGACTTCAAGGAAGGATTCCTCTGCCTGTGCTGCTGTGGGGGCTGTTTTGGCCCAGAGAGCATTGGCTGATGATATCCACAATCTGGTATACACTCCAAGAAAAGGCGAGAGGATAGAAGGGAAGCTTCAAATCGTGCTTCAGTCTGTCATTGATAATGGGATTAATGTGAAAATCAAAATGGCAAGCGCAAGTGAGAGTGAACGCAAGGAACCCGTAAATGAGCAAATGGTTGCAAACATGTACGGTGCTTTAAGGTCTGAGCTCAATCAGATATATTCAAAAATCACAGAACTCGAAATGGAAGCGAGTGAGCACTCTCTTGTCATTTCTGCAATCGAACCACTTGATCCATCAAGAAGATGCTACAGAATGATTGGGGGAGTGCTGGTGGAAAGAACTATCAAGGAGGTTCTGCCCGCCGTTCAACGCAACAAAGAGGGAATCGAGGAGGTCATTTCCAGACTCAATGAGGCCTTGGAGAAGAAAAAGAAGGAGATTGCTGACTTGGAGGCCAAATACAAGATCAAGATTAGAAAGCCTGATGGCGAGGCTAAGGAGGAAGACAGTGGGCGGAAAGAAGGTGCAGCTCAAGGAGTCCTCGTAGGCCCTGCAGGTGAAAACTAAACCCAACCCCATCGTGAACTTTAATCATATTCTTGTAGTGCTAAACCTTATAGTTTCATCCAGATGGTTCACTGCTATAATGCATATTTGTGTGAAATTTTGTTTAAACTTTCAGTTCAATAGGAAGATCCAGAACCTTTTTGGTACATAGATGATTTTGAGGGAAAAAATTGAATGGGAAC

Coding sequence (CDS)

ATGTTCTTAAGGAGAGGATTTTCTTTAATTAGCCCTCACTTTGTATTGAGGGCCTGCGGTTTTGGCTCAAAAGCATTAGCCAAGGGAATCCTTAGAAGCGAGAATGAAAGGGTAGCTCATTCAGATAGCATTGTAAATGGTTCATCCACGCCTCAGCCATCTCCACTGTTTCCTGAGAGTAAACCTCATTCGGTTGCTTATGATGTTGAACTTATAGACGATGATGCTTGGGCAGTTTCATTTGGTTTAGCTCGAGCATGGGAAGGGAGAGAGAAGGGCTCATCTGGCTTTGATAATAGATACTTCTTAGAGGATGAAGATCATGATCCAATTGATTATTGTGATTCAGAGTTTGATGATATTGACAACATGAGAATCCGGGGAAATCTCTTCTATAAACTTGATCGAGGTTCCAAAGAGTTTGAAGAATATAGCTTTGATTTTCATCGGAAGAAAAAATCTATAAAGGAAAAGGAAGATACGCAGCAAAACAAAAGCAAAGTCAATGATAAACCCAATAATCATTTGGCAAGTGGCCATGTAAAGCTTCCTGAACATGTGAAGAACAAATATGTAATAATTGAAAGGGAGGAGAACAATGACTTTGAGAAGAAGCTTAGGACACCCACGTTTAATCAGCTTACTGCCCCTTACCATGAGCCATTTTGTCTTGATATATACATATCAAAAGCCTCTGTTCGAGCCTGCATCATTCACCGGGGCACCAGTAAGGTGGTTGCTGTGGCACATTCAATTTCTAAGGACATGAAATTTGACCTGACTTCAAGGAAGGATTCCTCTGCCTGTGCTGCTGTGGGGGCTGTTTTGGCCCAGAGAGCATTGGCTGATGATATCCACAATCTGGTATACACTCCAAGAAAAGGCGAGAGGATAGAAGGGAAGCTTCAAATCGTGCTTCAGTCTGTCATTGATAATGGGATTAATGTGAAAATCAAAATGGCAAGCGCAAGTGAGAGTGAACGCAAGGAACCCGTAAATGAGCAAATGGTTGCAAACATGTACGGTGCTTTAAGGTCTGAGCTCAATCAGATATATTCAAAAATCACAGAACTCGAAATGGAAGCGAGTGAGCACTCTCTTGTCATTTCTGCAATCGAACCACTTGATCCATCAAGAAGATGCTACAGAATGATTGGGGGAGTGCTGGTGGAAAGAACTATCAAGGAGGTTCTGCCCGCCGTTCAACGCAACAAAGAGGGAATCGAGGAGGTCATTTCCAGACTCAATGAGGCCTTGGAGAAGAAAAAGAAGGAGATTGCTGACTTGGAGGCCAAATACAAGATCAAGATTAGAAAGCCTGATGGCGAGGCTAAGGAGGAAGACAGTGGGCGGAAAGAAGGTGCAGCTCAAGGAGTCCTCGTAGGCCCTGCAGGTGAAAACTAA

Homology

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BLAST of CmoCh06G014140 vs. Swiss-Prot
Match: PFD2_ARATH (Probable prefoldin subunit 2 OS=Arabidopsis thaliana GN=At3g22480 PE=2 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 1.0e-41
Identity = 98/149 (65.77%), Postives = 117/149 (78.52%), Query Frame = 1


Query: 320 MASASESER-KEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPS 379
           MAS S S   +EP NEQ V NMY   RSEL+QIYS IT+LEM+ SEHSLVI+AI+PLD S
Sbjct: 1   MASKSGSGGLREPPNEQAVLNMYEGKRSELSQIYSNITDLEMQVSEHSLVINAIQPLDQS 60

Query: 380 RRCYRMIGGVLVERTIKEVLPAVQRNKEGIEEVISRLNEALEKKKKEIADLEAKYKIKIR 439
           R+C+RMIGGVLVERTIKEVLPAVQRNK+G+EEV+ +L E LEKKKK++ + EAKYKI+I 
Sbjct: 61  RKCFRMIGGVLVERTIKEVLPAVQRNKDGLEEVVRKLYETLEKKKKDLTEFEAKYKIRIT 120

Query: 440 KPDGEAKEEDSGRKEGAAQGVLVGPAGEN 468
           K   E  +E   +KEG AQGVLVG A  +
Sbjct: 121 KQ--EDNKEGGNKKEGNAQGVLVGAASSS 147

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BLAST of CmoCh06G014140 vs. Swiss-Prot
Match: PFD2_DICDI (Probable prefoldin subunit 2 OS=Dictyostelium discoideum GN=pfdn2 PE=3 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 7.1e-22
Identity = 53/112 (47.32%), Postives = 82/112 (73.21%), Query Frame = 1


Query: 326 SERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSRRCYRMI 385
           S++K+ + E  +   Y  L+S+  QI S+I+E E +  E+ LVI+AI+ L+ +R+C+RM+
Sbjct: 2   SQQKQQLTENQIIEHYKDLKSQQQQIISRISEFESDVGEYGLVINAIQNLESNRKCFRMV 61

Query: 386 GGVLVERTIKEVLPAVQRNKEGIEEVISRLNEALEKKKKEIADLEAKYKIKI 438
           GGVLVERT+ EVLP +++N++GI+EV+ +L+E L  K KE+ D  A YKIKI
Sbjct: 62  GGVLVERTVGEVLPQIKQNRDGIKEVVKKLDENLSIKTKELNDFVALYKIKI 113

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BLAST of CmoCh06G014140 vs. Swiss-Prot
Match: PFD2_BOVIN (Prefoldin subunit 2 OS=Bos taurus GN=PFDN2 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 1.6e-21
Identity = 62/144 (43.06%), Postives = 90/144 (62.50%), Query Frame = 1


Query: 322 SASESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSRRC 381
           S+     K  V+ + V   +  LR E   + SK  ELEME +EHSLVI  ++ +D +R+C
Sbjct: 11  SSGSGTGKGAVSAEQVIAGFNRLRQEQRGLASKAAELEMELNEHSLVIDTLKEVDETRKC 70

Query: 382 YRMIGGVLVERTIKEVLPAVQRNKEGIEEVISRLNEALEKKKKEIADLEAKYKIKI---- 441
           YRM+GGVLVERT+KEVLPA++ NKE I+++I  L + L+ K KE+ +   K+ I++    
Sbjct: 71  YRMVGGVLVERTVKEVLPALENNKEQIQKIIETLTQQLQAKGKELNEFREKHNIRLMGED 130

Query: 442 RKPDGEAKEEDSGRKEGAAQGVLV 462
            KP  +   E +G K  +A GVLV
Sbjct: 131 EKPAAKENSEGAGAKASSA-GVLV 153

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BLAST of CmoCh06G014140 vs. Swiss-Prot
Match: PFD2_HUMAN (Prefoldin subunit 2 OS=Homo sapiens GN=PFDN2 PE=1 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 1.6e-21
Identity = 62/144 (43.06%), Postives = 90/144 (62.50%), Query Frame = 1


Query: 322 SASESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSRRC 381
           S+     K  V+ + V   +  LR E   + SK  ELEME +EHSLVI  ++ +D +R+C
Sbjct: 11  SSGSGAGKGAVSAEQVIAGFNRLRQEQRGLASKAAELEMELNEHSLVIDTLKEVDETRKC 70

Query: 382 YRMIGGVLVERTIKEVLPAVQRNKEGIEEVISRLNEALEKKKKEIADLEAKYKIKI---- 441
           YRM+GGVLVERT+KEVLPA++ NKE I+++I  L + L+ K KE+ +   K+ I++    
Sbjct: 71  YRMVGGVLVERTVKEVLPALENNKEQIQKIIETLTQQLQAKGKELNEFREKHNIRLMGED 130

Query: 442 RKPDGEAKEEDSGRKEGAAQGVLV 462
            KP  +   E +G K  +A GVLV
Sbjct: 131 EKPAAKENSEGAGAKASSA-GVLV 153

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BLAST of CmoCh06G014140 vs. Swiss-Prot
Match: PFD2_RAT (Prefoldin subunit 2 OS=Rattus norvegicus GN=Pfdn2 PE=2 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 2.1e-21
Identity = 62/144 (43.06%), Postives = 90/144 (62.50%), Query Frame = 1


Query: 322 SASESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSRRC 381
           S      K  V+ + V   +  LR E   + SK  ELEME +EHSLVI  ++ +D +R+C
Sbjct: 11  SGGSGTGKGAVSAEQVIAGFNRLRQEQRGLASKAAELEMELNEHSLVIDTLKEVDETRKC 70

Query: 382 YRMIGGVLVERTIKEVLPAVQRNKEGIEEVISRLNEALEKKKKEIADLEAKYKIKI---- 441
           YRM+GGVLVERT+KEVLPA++ NKE I+++I  L++ L+ K KE+ +   K+ I++    
Sbjct: 71  YRMVGGVLVERTVKEVLPALEGNKEQIQKIIETLSQQLQAKGKELNEFREKHNIRLMGED 130

Query: 442 RKPDGEAKEEDSGRKEGAAQGVLV 462
            KP  +   E +G K  +A GVLV
Sbjct: 131 EKPAAKENSEGAGAKSSSA-GVLV 153

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BLAST of CmoCh06G014140 vs. TrEMBL
Match: A0A0A0KSG6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G638320 PE=4 SV=1)

HSP 1 Score: 510.8 bits (1314), Expect = 1.8e-141
Identity = 261/320 (81.56%), Postives = 283/320 (88.44%), Query Frame = 1


Query: 1   MFLRRGFSLISPHFVLRACGFGSKALAKGILRSENERVAHSDSIVNGSSTPQPSPLFPES 60
           MFLRRGF+  SP FVLRAC F SKA   G + SENERVAHS+SI NGS  PQ +PLFP+ 
Sbjct: 1   MFLRRGFAFTSPQFVLRACSFCSKAFPGGSIGSENERVAHSNSIANGSCRPQLTPLFPDD 60

Query: 61  KPHSVAYDVELIDDDAWAVSFGLARAWEGREKGSSGFDNRYFLEDEDHDPIDYCDSEFDD 120
           KP SVAYDVEL+DDD WAVS GLARAWE REKG SGF+NRY LEDE HDP+DYCDS+FDD
Sbjct: 61  KPCSVAYDVELVDDDTWAVSCGLARAWEAREKGWSGFENRYSLEDEAHDPVDYCDSDFDD 120

Query: 121 IDNMRIRGNLFYKLDRGSKEFEEYSFDFHRKKKSIKEKEDTQQNKSKVNDKPNNHLASGH 180
           IDNMRIRGNLFYKLD+ SKEFEE S DFHRKKKS+KEKED  + +SKVNDK +  LASG 
Sbjct: 121 IDNMRIRGNLFYKLDQASKEFEECSLDFHRKKKSLKEKEDMVKRRSKVNDKLDKCLASGQ 180

Query: 181 VKLPEHVKNKYVIIEREENNDFEKKLRTPTFNQLTAPYHEPFCLDIYISKASVRACIIHR 240
           VKLPEH+KNKYVI+ER EN+D EKKLRTPTFNQLT+PYHEPFCLDI+ISKASVRACIIHR
Sbjct: 181 VKLPEHLKNKYVIVER-ENDDVEKKLRTPTFNQLTSPYHEPFCLDIFISKASVRACIIHR 240

Query: 241 GTSKVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRALADDIHNLVYTPRKGERIEG 300
            TSKVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRAL DDIHNL+YTPRKGERIEG
Sbjct: 241 VTSKVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRALGDDIHNLIYTPRKGERIEG 300

Query: 301 KLQIVLQSVIDNGINVKIKM 321
           KLQIVLQSVIDNGINV +K+
Sbjct: 301 KLQIVLQSVIDNGINVTVKI 319

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BLAST of CmoCh06G014140 vs. TrEMBL
Match: W9QM55_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_004462 PE=4 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 8.5e-91
Identity = 196/342 (57.31%), Postives = 241/342 (70.47%), Query Frame = 1


Query: 1   MFLRRGFSL---ISPHFVLRACGFGSKALAKGILRSENERVAHSDSIVNGSSTPQPSPLF 60
           MFLRRG S    + PHF    CGF SKA+   +   EN      DS+ N SS    SPLF
Sbjct: 2   MFLRRGISFALKVKPHFQSSYCGFCSKAIPSSVFDKEN------DSVTNYSSNLHLSPLF 61

Query: 61  PESKP-HSVAYDVELIDDDAWAVSFGLARAWEGREKGSSGFDNRYFLEDEDHDPIDYC-- 120
           P++KP H   YD+EL+D+DAW +S GLA+AW  RE+ SS       L+ E  D +D    
Sbjct: 62  PDAKPSHLSGYDIELVDNDAWQLSSGLAQAW--REETSS------LLKKEIADSVDNNGS 121

Query: 121 -----DSEFDDIDNMRIRGNLFYKLDRGSKEFEEYSFDFHRKKKSIKEKEDTQQNKSKVN 180
                D +FDDIDNMRI GNLFYK+DR SKE+EEYSFDFHR+KK  ++K D +++K K N
Sbjct: 122 QLGKGDPDFDDIDNMRIHGNLFYKIDRDSKEYEEYSFDFHRRKKPSQKKNDPEESKRKQN 181

Query: 181 DK-------PNNHLASGHVKLPEHVKNKYVII----EREENNDFEKKLRTPTFNQLTAPY 240
           D        P+   AS   KLP+    K  ++    + + ++  +KKLRTPTFNQLT PY
Sbjct: 182 DSNEAKRDSPSVTAASTGEKLPKVANEKCGLMSPLGKTDSSSVGKKKLRTPTFNQLTGPY 241

Query: 241 HEPFCLDIYISKASVRACIIHRGTSKVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQ 300
           HEPFCLDIYISKASVRACI+HR TSKVVAVAHSISKDMKFDL S ++ +AC AVG+VLAQ
Sbjct: 242 HEPFCLDIYISKASVRACIVHRVTSKVVAVAHSISKDMKFDLASTRNLAACEAVGSVLAQ 301

Query: 301 RALADDIHNLVYTPRKGERIEGKLQIVLQSVIDNGINVKIKM 321
           RALADDIH++VYTPRKGER+EGKLQ+VLQS+IDNGIN+K+K+
Sbjct: 302 RALADDIHDVVYTPRKGERLEGKLQVVLQSIIDNGINMKVKI 329

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BLAST of CmoCh06G014140 vs. TrEMBL
Match: M5XP25_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022034mg PE=4 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 2.7e-89
Identity = 198/348 (56.90%), Postives = 246/348 (70.69%), Query Frame = 1


Query: 1   MFLRRGF---SLISPHFVLRACGFGSKALAKGILRSENERVAHSDSIVNGSSTPQPSPLF 60
           MF +RG    S++ PHF+ RA  FG K+     +   +E+V+      N SS+   SPLF
Sbjct: 1   MFFKRGITFASVVYPHFLSRARSFGPKSNTTIPILHRSEQVS------NYSSSFHLSPLF 60

Query: 61  P-ESKPHSVAYDVELIDDDAWAVSFGLARAWEGREKGSSGFDNRYFLEDEDHDPIDYC-- 120
           P ++KPHS +YD+EL+D DAW VS GLA A  G E  +S  ++ Y  E+   +P+D C  
Sbjct: 61  PSDAKPHSDSYDIELVDHDAWLVSSGLALAGRGTEGTAS--ESSYLSEEVVDEPVDNCSL 120

Query: 121 ----DSEFDDIDNMRIRGNLFYKLDRGSKEFEEYSFDFHRKKKSIKEKEDTQQNKSKVN- 180
               D +FDDIDNMRIRG+LFYKLDR SKEFEEY+FDFHR+KKS K+K+D ++ K K N 
Sbjct: 121 PVEGDPDFDDIDNMRIRGSLFYKLDRNSKEFEEYNFDFHRRKKSSKQKDDPKEIKRKSNE 180

Query: 181 ------DKPNNHLASGHVKLPEHVKNKYVIIEREENNDFEKKLRTPTFNQLTAPYHEPFC 240
                 D P   L S   K    + N   + E +     +KKLRTPT+NQLT P+HEPFC
Sbjct: 181 LKESKTDSPIRDLFSRSEK-QGRIANNSQLDEMDTACVGKKKLRTPTYNQLTGPFHEPFC 240

Query: 241 LDIYISKASVRACIIHRGTSKVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRALAD 300
           LDIYISKASVRACIIHR TSKVVAVAHSISKDMKFDL S ++++ACAAVGAVLAQRAL D
Sbjct: 241 LDIYISKASVRACIIHRVTSKVVAVAHSISKDMKFDLGSTRNAAACAAVGAVLAQRALGD 300

Query: 301 DIHNLVYTPRKGERIEGKLQIVLQSVIDNGINVKIKMASASESERKEP 332
           DIH+++YTPRKGER+EGKLQIVLQS+IDNGINVK+K+    +  RK+P
Sbjct: 301 DIHDVIYTPRKGERLEGKLQIVLQSIIDNGINVKVKL---KQITRKKP 336

[Close]

BLAST of CmoCh06G014140 vs. TrEMBL
Match: A0A067KVL4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02175 PE=4 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 3.8e-83
Identity = 185/343 (53.94%), Postives = 227/343 (66.18%), Query Frame = 1


Query: 8   SLISPHFVLRACGFGSKALAKGILRSENERVAHSD----SIVNGSSTPQPSPLFPESKPH 67
           +L+S HF+L+ C F SKA A       +   A  D    +  N SS     PLF E +PH
Sbjct: 13  TLLSSHFLLKVCTFRSKATAVVDNTDSSATKASVDKRQSASTNNSSKIHVPPLFSEERPH 72

Query: 68  SVAYDVELIDDDAWAVSFGLARAWEGREKGSSGFDNRYFLEDEDHDPIDYC--DSEFDDI 127
              YD+EL+D+D W VS GLA  W G +K   G ++     DE  D +     DS+FD+I
Sbjct: 73  LDGYDIELVDNDTWQVSSGLAHVWRGLDK-EMGLESYTEAFDEQVDDVASLQDDSDFDEI 132

Query: 128 DNMRIRGNLFYKLDRGSKEFEEYSFDFHRKKKSIKEKEDTQQNKSKVNDKPNNHLASGHV 187
           DNMRIRGNLFYKLDR SKEFEEY FDFHRK  S K K++T+  + + + K NN   +   
Sbjct: 133 DNMRIRGNLFYKLDRDSKEFEEYRFDFHRKNSS-KRKDNTKGKEKEESAKNNNCKENKRN 192

Query: 188 KLPEH-----VKNKYVIIEREENNDF------------EKKLRTPTFNQLTAPYHEPFCL 247
           + P H     V+    I++     D             +KK+RTPTFNQLTAPYHEPFCL
Sbjct: 193 RNPSHSSAFEVEKCSQIVKIGRVYDLLLDNMVGSSGIEKKKVRTPTFNQLTAPYHEPFCL 252

Query: 248 DIYISKASVRACIIHRGTSKVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRALADD 307
           DIYISKASVRACIIHR TSKVVAVAHSISKD+KFDL S ++++AC  VGA+LAQRALADD
Sbjct: 253 DIYISKASVRACIIHRVTSKVVAVAHSISKDIKFDLRSTRNAAACTTVGAILAQRALADD 312

Query: 308 IHNLVYTPRKGERIEGKLQIVLQSVIDNGINVKIKMASASESE 328
           IH+++YTPRKGER+EGKLQIVLQS+IDNGINVK+K+      E
Sbjct: 313 IHDVIYTPRKGERLEGKLQIVLQSIIDNGINVKVKLKQRKPHE 353

[Close]

BLAST of CmoCh06G014140 vs. TrEMBL
Match: A0A059B3Z6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H03479 PE=4 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 1.9e-82
Identity = 184/331 (55.59%), Postives = 231/331 (69.79%), Query Frame = 1


Query: 3   LRRGFSLIS------PHFVLRACGFGSKALAKGILRSENERVAHSDSIVN-GSSTPQPSP 62
           LRRG ++ S      P  V+      S+   KGI +  +E V    +    G    Q SP
Sbjct: 6   LRRGVAVTSVVSSRFPPRVVSIWSSASEVADKGIEKGRSELVDSGPTTTACGLERMQLSP 65

Query: 63  LFPESKPHSVAYDVELIDDDAWAVSFGLARAWEGREKGSSGFDNRYFLEDE--DHDPIDY 122
           LF ES+P      +E++DDD W VS GLA+AW+G  +GS G +N     DE  DH     
Sbjct: 66  LFAESRPSLDGCAIEVVDDDQWRVSAGLAQAWQG-PRGSLGTENLTETTDEHEDHSSSVE 125

Query: 123 CDSEFDDIDNMRIRGNLFYKLDRGSKEFEEYSFDFHRKKKSIKEKEDTQQNKSKVNDKPN 182
            +++FD+IDNMRIRGNLFYK+D+ SKEFEEYSF+FHRKK S K +ED ++ K K     +
Sbjct: 126 EEADFDEIDNMRIRGNLFYKIDKASKEFEEYSFEFHRKK-SPKRREDPKETKKK----ED 185

Query: 183 NHLASGHVKLPEHVKNKYV--IIEREENN--DFEKKLRTPTFNQLTAPYHEPFCLDIYIS 242
             L + + KLP+  K K V  +++  E +    +KKLRTPTFNQLT PYHEPFCLDIYIS
Sbjct: 186 RGLITRNEKLPKAAKKKNVPSLLDGAEVDCTSNKKKLRTPTFNQLTGPYHEPFCLDIYIS 245

Query: 243 KASVRACIIHRGTSKVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRALADDIHNLV 302
           KASVRACIIHR TSKVVAVAHSISKDMKFDL S +++ ACAAVG +LAQRALADDIH+++
Sbjct: 246 KASVRACIIHRATSKVVAVAHSISKDMKFDLASTRNADACAAVGEILAQRALADDIHDII 305

Query: 303 YTPRKGERIEGKLQIVLQSVIDNGINVKIKM 321
           YTPRKGE++EGKL IVLQ+VIDNG+NVK+K+
Sbjct: 306 YTPRKGEKLEGKLMIVLQAVIDNGVNVKVKL 330

[Close]

BLAST of CmoCh06G014140 vs. TAIR10
Match: AT3G22450.1 (AT3G22450.1 Ribosomal L18p/L5e family protein)

HSP 1 Score: 256.9 bits (655), Expect = 2.4e-68
Identity = 143/263 (54.37%), Postives = 186/263 (70.72%), Query Frame = 1


Query: 69  VELIDDDAWAVSFGLARAWEGREKGSSGFDNRYFLEDEDHDPIDYCDSEFDDIDNMRIRG 128
           +E +DDD W VS  L++AW  + +  +  ++   ++      +D  D + D+IDNMRIRG
Sbjct: 49  IETVDDDVWHVSSSLSQAWR-QFQADTAKNSPVTIQGVRETILDDEDPDHDEIDNMRIRG 108

Query: 129 NLFYKLDRGSKEFEEYSFDFHRK------KKSIKEKEDT---QQNKSKVND--KPNNHLA 188
           +LF+KLDRGSKEFEEY++DFHRK      KK   ++E+T   + NK +V D  K  N   
Sbjct: 109 DLFFKLDRGSKEFEEYNYDFHRKNQHKNAKKEQNQEEETKIKKDNKKEVRDEYKKRNDSF 168

Query: 189 SGHVKLPEHVKNKYVIIEREENNDFEKKLRTPTFNQLTAPYHEPFCLDIYISKASVRACI 248
           +G    P              N   +K+ RT TFNQLTAP+H PFCLDIYISK SVRAC+
Sbjct: 169 TGETDHP--------------NEAVKKRERTFTFNQLTAPFHYPFCLDIYISKESVRACV 228

Query: 249 IHRGTSKVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRALADDIHNLVYTPRKGER 308
           IHR TSKVV VAHSISKDMKFDL SR++ +ACAAVGAVLAQR+L DDIH+++YTPRKG++
Sbjct: 229 IHRVTSKVVTVAHSISKDMKFDLGSRRNVAACAAVGAVLAQRSLEDDIHDVIYTPRKGDK 288

Query: 309 IEGKLQIVLQSVIDNGINVKIKM 321
           IEGKLQ+VLQ++IDNG+NVK+K+
Sbjct: 289 IEGKLQVVLQALIDNGVNVKVKL 296

[Close]

BLAST of CmoCh06G014140 vs. TAIR10
Match: AT3G22480.2 (AT3G22480.2 prefoldin 2)

HSP 1 Score: 172.6 bits (436), Expect = 5.9e-43
Identity = 98/149 (65.77%), Postives = 117/149 (78.52%), Query Frame = 1


Query: 320 MASASESER-KEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPS 379
           MAS S S   +EP NEQ V NMY   RSEL+QIYS IT+LEM+ SEHSLVI+AI+PLD S
Sbjct: 1   MASKSGSGGLREPPNEQAVLNMYEGKRSELSQIYSNITDLEMQVSEHSLVINAIQPLDQS 60

Query: 380 RRCYRMIGGVLVERTIKEVLPAVQRNKEGIEEVISRLNEALEKKKKEIADLEAKYKIKIR 439
           R+C+RMIGGVLVERTIKEVLPAVQRNK+G+EEV+ +L E LEKKKK++ + EAKYKI+I 
Sbjct: 61  RKCFRMIGGVLVERTIKEVLPAVQRNKDGLEEVVRKLYETLEKKKKDLTEFEAKYKIRIT 120

Query: 440 KPDGEAKEEDSGRKEGAAQGVLVGPAGEN 468
           K   E  +E   +KEG AQGVLVG A  +
Sbjct: 121 KQ--EDNKEGGNKKEGNAQGVLVGAASSS 147

[Close]

BLAST of CmoCh06G014140 vs. TAIR10
Match: AT1G08845.2 (AT1G08845.2 Ribosomal L18p/L5e family protein)

HSP 1 Score: 108.2 bits (269), Expect = 1.4e-23
Identity = 58/120 (48.33%), Postives = 80/120 (66.67%), Query Frame = 1


Query: 203 EKKLRTP----TFNQLTAPYHEPFCLDIYISKASVRACIIHRGTSKVVAVAHSISKDMKF 262
           EKK + P    +F Q T  Y EPF LD++ISK  V A + HR T + VAVA + SKD+K 
Sbjct: 112 EKKSKNPDKHVSFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTCRQVAVAGTNSKDVKA 171

Query: 263 DLTSRKDSSACAAVGAVLAQRALADDIHNLVYTPRKGERIEGKLQIVLQSVIDNGINVKI 319
            L SR D  AC ++G +L++RA   D++   YTPR  ++ EGK++ V+QS+IDNGI+VKI
Sbjct: 172 VLRSRCDIPACMSIGRILSERAKEADVYTASYTPRDQDKFEGKIRAVVQSLIDNGIDVKI 231

[Close]

BLAST of CmoCh06G014140 vs. TAIR10
Match: AT3G20230.1 (AT3G20230.1 Ribosomal L18p/L5e family protein)

HSP 1 Score: 93.2 bits (230), Expect = 4.5e-19
Identity = 43/119 (36.13%), Postives = 78/119 (65.55%), Query Frame = 1


Query: 196 REENNDFEKKLRTPTFNQLTAPYHEPFCLDIYISKASVRACIIHRGTSKVVAVAHSISKD 255
           R    +  K+    ++ Q T  Y  PF L+++ S+  + A ++HR TSKV++VA + ++D
Sbjct: 65  RRSRGEAAKRPNRKSWKQRTDMYMRPFLLNVFFSRKFIHAKVMHRPTSKVISVATTNARD 124

Query: 256 MKFDLTSRKDSSACAAVGAVLAQRALADDIHNLVYTPRKGERIEGKLQIVLQSVIDNGI 315
           ++ ++ S  D+ AC  +G ++A+R++  D++ + Y PRKGERIEGKL IV+ ++ ++GI
Sbjct: 125 IRTNIPSLVDNEACRLIGKLIAERSMEADVYAVSYEPRKGERIEGKLGIVIDTIKEHGI 183

[Close]

BLAST of CmoCh06G014140 vs. TAIR10
Match: AT5G27820.1 (AT5G27820.1 Ribosomal L18p/L5e family protein)

HSP 1 Score: 53.1 bits (126), Expect = 5.2e-07
Identity = 28/99 (28.28%), Postives = 53/99 (53.54%), Query Frame = 1


Query: 218 YHEPFCLDIYISKASVRACIIHRGTSKVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLA 277
           Y +P+ L ++ +   V A +IH  T+ V   A S  K ++  +   +D +A + +G +L 
Sbjct: 15  YLKPYVLKMHFTNKFVHAQVIHSPTATVACSASSQEKALRETMDITRDVAAASKIGKILG 74

Query: 278 QRALADDIHNLVYTPRKGERIEGKLQIVLQSVIDNGINV 317
           +R L  DI  +    +K +R  GK++ V+ SV + G+ +
Sbjct: 75  ERLLMKDIPAVTIQMKKEQRYHGKVKAVIDSVREAGVKL 113

[Close]

BLAST of CmoCh06G014140 vs. NCBI nr
Match: gi|659118877|ref|XP_008459355.1| (PREDICTED: uncharacterized protein LOC103498514 [Cucumis melo])

HSP 1 Score: 516.2 bits (1328), Expect = 6.2e-143
Identity = 263/330 (79.70%), Postives = 288/330 (87.27%), Query Frame = 1


Query: 1   MFLRRGFSLISPHFVLRACGFGSKALAKGILRSENERVAHSDSIVNGSSTPQPSPLFPES 60
           MFLRRGF+  SP  VLRAC F SKA   G + SENERVAHS+SI NGSS PQ +PLFP+ 
Sbjct: 1   MFLRRGFAFTSPQNVLRACSFCSKAFPGGSIGSENERVAHSNSIANGSSRPQLTPLFPDD 60

Query: 61  KPHSVAYDVELIDDDAWAVSFGLARAWEGREKGSSGFDNRYFLEDEDHDPIDYCDSEFDD 120
           KP SVAYD+EL+DDD WAVS GLARAWEGREKG SG +NRY LEDE HDP+DYCDS+FDD
Sbjct: 61  KPRSVAYDIELVDDDTWAVSCGLARAWEGREKGWSGLENRYSLEDEAHDPVDYCDSDFDD 120

Query: 121 IDNMRIRGNLFYKLDRGSKEFEEYSFDFHRKKKSIKEKEDTQQNKSKVNDKPNNHLASGH 180
           IDNMRIRGNLFYKLDRGSKEF+EYS DFHRKKKSIKEKE+ ++++SKVNDK +  L SG 
Sbjct: 121 IDNMRIRGNLFYKLDRGSKEFDEYSLDFHRKKKSIKEKENREKSRSKVNDKLDKCLPSGQ 180

Query: 181 VKLPEHVKNKYVIIEREENNDFEKKLRTPTFNQLTAPYHEPFCLDIYISKASVRACIIHR 240
           VKLPEH+KNKYVI+ER EN+D EKKLRTPTFNQLT  YHEPFCLDIYISKASVRACIIHR
Sbjct: 181 VKLPEHLKNKYVIVER-ENDDVEKKLRTPTFNQLTGLYHEPFCLDIYISKASVRACIIHR 240

Query: 241 GTSKVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRALADDIHNLVYTPRKGERIEG 300
            TSKVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRALADDIHNL+YTPRKGERIEG
Sbjct: 241 VTSKVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRALADDIHNLIYTPRKGERIEG 300

Query: 301 KLQIVLQSVIDNGINVKIKMASASESERKE 331
           KLQ+VLQSVIDNGINVK+K+       + E
Sbjct: 301 KLQVVLQSVIDNGINVKVKIKQQKRPRKLE 329

[Close]

BLAST of CmoCh06G014140 vs. NCBI nr
Match: gi|778707360|ref|XP_011656005.1| (PREDICTED: uncharacterized protein LOC101213193 [Cucumis sativus])

HSP 1 Score: 510.8 bits (1314), Expect = 2.6e-141
Identity = 261/320 (81.56%), Postives = 283/320 (88.44%), Query Frame = 1


Query: 1   MFLRRGFSLISPHFVLRACGFGSKALAKGILRSENERVAHSDSIVNGSSTPQPSPLFPES 60
           MFLRRGF+  SP FVLRAC F SKA   G + SENERVAHS+SI NGS  PQ +PLFP+ 
Sbjct: 1   MFLRRGFAFTSPQFVLRACSFCSKAFPGGSIGSENERVAHSNSIANGSCRPQLTPLFPDD 60

Query: 61  KPHSVAYDVELIDDDAWAVSFGLARAWEGREKGSSGFDNRYFLEDEDHDPIDYCDSEFDD 120
           KP SVAYDVEL+DDD WAVS GLARAWE REKG SGF+NRY LEDE HDP+DYCDS+FDD
Sbjct: 61  KPCSVAYDVELVDDDTWAVSCGLARAWEAREKGWSGFENRYSLEDEAHDPVDYCDSDFDD 120

Query: 121 IDNMRIRGNLFYKLDRGSKEFEEYSFDFHRKKKSIKEKEDTQQNKSKVNDKPNNHLASGH 180
           IDNMRIRGNLFYKLD+ SKEFEE S DFHRKKKS+KEKED  + +SKVNDK +  LASG 
Sbjct: 121 IDNMRIRGNLFYKLDQASKEFEECSLDFHRKKKSLKEKEDMVKRRSKVNDKLDKCLASGQ 180

Query: 181 VKLPEHVKNKYVIIEREENNDFEKKLRTPTFNQLTAPYHEPFCLDIYISKASVRACIIHR 240
           VKLPEH+KNKYVI+ER EN+D EKKLRTPTFNQLT+PYHEPFCLDI+ISKASVRACIIHR
Sbjct: 181 VKLPEHLKNKYVIVER-ENDDVEKKLRTPTFNQLTSPYHEPFCLDIFISKASVRACIIHR 240

Query: 241 GTSKVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRALADDIHNLVYTPRKGERIEG 300
            TSKVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRAL DDIHNL+YTPRKGERIEG
Sbjct: 241 VTSKVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRALGDDIHNLIYTPRKGERIEG 300

Query: 301 KLQIVLQSVIDNGINVKIKM 321
           KLQIVLQSVIDNGINV +K+
Sbjct: 301 KLQIVLQSVIDNGINVTVKI 319

[Close]

BLAST of CmoCh06G014140 vs. NCBI nr
Match: gi|703078547|ref|XP_010090920.1| (hypothetical protein L484_004462 [Morus notabilis])

HSP 1 Score: 342.4 bits (877), Expect = 1.2e-90
Identity = 196/342 (57.31%), Postives = 241/342 (70.47%), Query Frame = 1


Query: 1   MFLRRGFSL---ISPHFVLRACGFGSKALAKGILRSENERVAHSDSIVNGSSTPQPSPLF 60
           MFLRRG S    + PHF    CGF SKA+   +   EN      DS+ N SS    SPLF
Sbjct: 2   MFLRRGISFALKVKPHFQSSYCGFCSKAIPSSVFDKEN------DSVTNYSSNLHLSPLF 61

Query: 61  PESKP-HSVAYDVELIDDDAWAVSFGLARAWEGREKGSSGFDNRYFLEDEDHDPIDYC-- 120
           P++KP H   YD+EL+D+DAW +S GLA+AW  RE+ SS       L+ E  D +D    
Sbjct: 62  PDAKPSHLSGYDIELVDNDAWQLSSGLAQAW--REETSS------LLKKEIADSVDNNGS 121

Query: 121 -----DSEFDDIDNMRIRGNLFYKLDRGSKEFEEYSFDFHRKKKSIKEKEDTQQNKSKVN 180
                D +FDDIDNMRI GNLFYK+DR SKE+EEYSFDFHR+KK  ++K D +++K K N
Sbjct: 122 QLGKGDPDFDDIDNMRIHGNLFYKIDRDSKEYEEYSFDFHRRKKPSQKKNDPEESKRKQN 181

Query: 181 DK-------PNNHLASGHVKLPEHVKNKYVII----EREENNDFEKKLRTPTFNQLTAPY 240
           D        P+   AS   KLP+    K  ++    + + ++  +KKLRTPTFNQLT PY
Sbjct: 182 DSNEAKRDSPSVTAASTGEKLPKVANEKCGLMSPLGKTDSSSVGKKKLRTPTFNQLTGPY 241

Query: 241 HEPFCLDIYISKASVRACIIHRGTSKVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQ 300
           HEPFCLDIYISKASVRACI+HR TSKVVAVAHSISKDMKFDL S ++ +AC AVG+VLAQ
Sbjct: 242 HEPFCLDIYISKASVRACIVHRVTSKVVAVAHSISKDMKFDLASTRNLAACEAVGSVLAQ 301

Query: 301 RALADDIHNLVYTPRKGERIEGKLQIVLQSVIDNGINVKIKM 321
           RALADDIH++VYTPRKGER+EGKLQ+VLQS+IDNGIN+K+K+
Sbjct: 302 RALADDIHDVVYTPRKGERLEGKLQVVLQSIIDNGINMKVKI 329

[Close]

BLAST of CmoCh06G014140 vs. NCBI nr
Match: gi|1009141421|ref|XP_015888185.1| (PREDICTED: uncharacterized protein LOC107423173 [Ziziphus jujuba])

HSP 1 Score: 338.2 bits (866), Expect = 2.3e-89
Identity = 191/333 (57.36%), Postives = 232/333 (69.67%), Query Frame = 1


Query: 1   MFLRRGFSL---ISPHFVLRACGFGSKALAKGILRSENERVAHSDSIVNGSSTPQPSPLF 60
           MF RRG  L   + PHF+       S A +  ++  E E V H   +    S    SPLF
Sbjct: 1   MFSRRGMILALALKPHFLSGVSCSCSNA-SSTVVNREAEVVTHFVPVAYYCSRLHLSPLF 60

Query: 61  PESKPHSVAYDVELIDDDAWAVSFGLARAWEGREKGSSGFDNRYFLEDEDHDPIDYC--- 120
           P+SKP S  Y++EL+D DAW +S GLA+AW+G +  + G  +         + +D C   
Sbjct: 61  PDSKPSSNGYEIELVDHDAWRLSSGLAQAWQGMDGAAMGTSSL------SEEVVDNCSQP 120

Query: 121 ---DSEFDDIDNMRIRGNLFYKLDRGSKEFEEYSFDFHRKKKSIKEKEDTQQNKSKVNDK 180
              D +FD+IDNMRIRGNLFYKLDRGSKEFEEYSFDFHR KKS+K+K+D    K K N+ 
Sbjct: 121 GQEDPDFDEIDNMRIRGNLFYKLDRGSKEFEEYSFDFHRYKKSLKKKDDP---KEKKNES 180

Query: 181 PNNHLASGHVKLPEHVKNKYVII----EREENNDFEKKLRTPTFNQLTAPYHEPFCLDIY 240
           P  ++AS   KLP+ +  K  ++    E E     +KKLR PTFNQLT PYHEPFCLDIY
Sbjct: 181 PRQNVASVSDKLPKVLNKKSGLMSPTDEIESTCVGKKKLRAPTFNQLTGPYHEPFCLDIY 240

Query: 241 ISKASVRACIIHRGTSKVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRALADDIHN 300
           ISKASVRACI+HR TSKVVAVAHSISKDMKFDL S +DS ACAAVG VLAQRALADDIH+
Sbjct: 241 ISKASVRACIVHRATSKVVAVAHSISKDMKFDLASTRDSVACAAVGTVLAQRALADDIHD 300

Query: 301 LVYTPRKGERIEGKLQIVLQSVIDNGINVKIKM 321
           ++YTPRKGER+EGKL  VLQS++DNGINVK+K+
Sbjct: 301 VIYTPRKGERLEGKLHFVLQSIMDNGINVKVKI 323

[Close]

BLAST of CmoCh06G014140 vs. NCBI nr
Match: gi|596293289|ref|XP_007226643.1| (hypothetical protein PRUPE_ppa022034mg [Prunus persica])

HSP 1 Score: 337.4 bits (864), Expect = 3.9e-89
Identity = 198/348 (56.90%), Postives = 246/348 (70.69%), Query Frame = 1


Query: 1   MFLRRGF---SLISPHFVLRACGFGSKALAKGILRSENERVAHSDSIVNGSSTPQPSPLF 60
           MF +RG    S++ PHF+ RA  FG K+     +   +E+V+      N SS+   SPLF
Sbjct: 1   MFFKRGITFASVVYPHFLSRARSFGPKSNTTIPILHRSEQVS------NYSSSFHLSPLF 60

Query: 61  P-ESKPHSVAYDVELIDDDAWAVSFGLARAWEGREKGSSGFDNRYFLEDEDHDPIDYC-- 120
           P ++KPHS +YD+EL+D DAW VS GLA A  G E  +S  ++ Y  E+   +P+D C  
Sbjct: 61  PSDAKPHSDSYDIELVDHDAWLVSSGLALAGRGTEGTAS--ESSYLSEEVVDEPVDNCSL 120

Query: 121 ----DSEFDDIDNMRIRGNLFYKLDRGSKEFEEYSFDFHRKKKSIKEKEDTQQNKSKVN- 180
               D +FDDIDNMRIRG+LFYKLDR SKEFEEY+FDFHR+KKS K+K+D ++ K K N 
Sbjct: 121 PVEGDPDFDDIDNMRIRGSLFYKLDRNSKEFEEYNFDFHRRKKSSKQKDDPKEIKRKSNE 180

Query: 181 ------DKPNNHLASGHVKLPEHVKNKYVIIEREENNDFEKKLRTPTFNQLTAPYHEPFC 240
                 D P   L S   K    + N   + E +     +KKLRTPT+NQLT P+HEPFC
Sbjct: 181 LKESKTDSPIRDLFSRSEK-QGRIANNSQLDEMDTACVGKKKLRTPTYNQLTGPFHEPFC 240

Query: 241 LDIYISKASVRACIIHRGTSKVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRALAD 300
           LDIYISKASVRACIIHR TSKVVAVAHSISKDMKFDL S ++++ACAAVGAVLAQRAL D
Sbjct: 241 LDIYISKASVRACIIHRVTSKVVAVAHSISKDMKFDLGSTRNAAACAAVGAVLAQRALGD 300

Query: 301 DIHNLVYTPRKGERIEGKLQIVLQSVIDNGINVKIKMASASESERKEP 332
           DIH+++YTPRKGER+EGKLQIVLQS+IDNGINVK+K+    +  RK+P
Sbjct: 301 DIHDVIYTPRKGERLEGKLQIVLQSIIDNGINVKVKL---KQITRKKP 336

The following BLAST results are available for this feature:

BLAST of CmoCh06G014140 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PFD2_ARATH	1.0e-41	65.77	Probable prefoldin subunit 2 OS=Arabidopsis thaliana GN=At3g22480 PE=2 SV=1	[more]
PFD2_DICDI	7.1e-22	47.32	Probable prefoldin subunit 2 OS=Dictyostelium discoideum GN=pfdn2 PE=3 SV=1	[more]
PFD2_BOVIN	1.6e-21	43.06	Prefoldin subunit 2 OS=Bos taurus GN=PFDN2 PE=2 SV=1	[more]
PFD2_HUMAN	1.6e-21	43.06	Prefoldin subunit 2 OS=Homo sapiens GN=PFDN2 PE=1 SV=1	[more]
PFD2_RAT	2.1e-21	43.06	Prefoldin subunit 2 OS=Rattus norvegicus GN=Pfdn2 PE=2 SV=1	[more]

BLAST of CmoCh06G014140 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KSG6_CUCSA	1.8e-141	81.56	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G638320 PE=4 SV=1	[more]
W9QM55_9ROSA	8.5e-91	57.31	Uncharacterized protein OS=Morus notabilis GN=L484_004462 PE=4 SV=1	[more]
M5XP25_PRUPE	2.7e-89	56.90	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022034mg PE=4 SV=1	[more]
A0A067KVL4_JATCU	3.8e-83	53.94	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02175 PE=4 SV=1	[more]
A0A059B3Z6_EUCGR	1.9e-82	55.59	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H03479 PE=4 SV=1	[more]

BLAST of CmoCh06G014140 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G22450.1	2.4e-68	54.37	Ribosomal L18p/L5e family protein	[more]
AT3G22480.2	5.9e-43	65.77	prefoldin 2	[more]
AT1G08845.2	1.4e-23	48.33	Ribosomal L18p/L5e family protein	[more]
AT3G20230.1	4.5e-19	36.13	Ribosomal L18p/L5e family protein	[more]
AT5G27820.1	5.2e-07	28.28	Ribosomal L18p/L5e family protein	[more]

BLAST of CmoCh06G014140 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659118877\|ref\|XP_008459355.1\|	6.2e-143	79.70	PREDICTED: uncharacterized protein LOC103498514 [Cucumis melo]	[more]
gi\|778707360\|ref\|XP_011656005.1\|	2.6e-141	81.56	PREDICTED: uncharacterized protein LOC101213193 [Cucumis sativus]	[more]
gi\|703078547\|ref\|XP_010090920.1\|	1.2e-90	57.31	hypothetical protein L484_004462 [Morus notabilis]	[more]
gi\|1009141421\|ref\|XP_015888185.1\|	2.3e-89	57.36	PREDICTED: uncharacterized protein LOC107423173 [Ziziphus jujuba]	[more]
gi\|596293289\|ref\|XP_007226643.1\|	3.9e-89	56.90	hypothetical protein PRUPE_ppa022034mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002777	PFD_beta-like
IPR005484	Ribosomal_L18
IPR009053	Prefoldin

Vocabulary: **Biological Process**
Term	Definition
GO:0006457	protein folding
GO:0006412	translation

Vocabulary: **Cellular Component**
Term	Definition
GO:0016272	prefoldin complex
GO:0005622	intracellular
GO:0005840	ribosome

Vocabulary: **Molecular Function**
Term	Definition
GO:0051082	unfolded protein binding
GO:0003735	structural constituent of ribosome

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006412	translation
cellular_component	GO:0016272	prefoldin complex
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005622	intracellular
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0051082	unfolded protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh06G014140.1	CmoCh06G014140.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002777	Prefoldin beta-like	PFAM	PF01920	Prefoldin_2	coord: 335..438 score: 1.3
IPR005484	Ribosomal protein L18	PFAM	PF00861	Ribosomal_L18p	coord: 224..315 score: 3.
IPR009053	Prefoldin	GENE3D	G3DSA:1.10.287.370		coord: 337..433 score: 1.7
IPR009053	Prefoldin	unknown	SSF46579	Prefoldin	coord: 338..435 score: 8.89
None	No IPR available	unknown	Coil	Coil	coord: 341..361 score: -coord: 405..439 scor
None	No IPR available	GENE3D	G3DSA:3.30.420.100		coord: 220..315 score: 5.4
None	No IPR available	PANTHER	PTHR12899	39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL	coord: 74..333 score: 1.2E
None	No IPR available	PANTHER	PTHR12899:SF9	EXPRESSED PROTEIN	coord: 74..333 score: 1.2E
None	No IPR available	unknown	SSF53137	Translational machinery components	coord: 205..314 score: 2.88

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh06G014140	CmaCh14G017060	Cucurbita maxima (Rimu)	cmacmoB271
CmoCh06G014140	CmaCh06G014120	Cucurbita maxima (Rimu)	cmacmoB829
CmoCh06G014140	Cla021627	Watermelon (97103) v1	cmowmB793
CmoCh06G014140	ClCG05G005160	Watermelon (Charleston Gray)	cmowcgB743
CmoCh06G014140	Lsi05G016030	Bottle gourd (USVL1VR-Ls)	cmolsiB757
CmoCh06G014140	Cp4.1LG08g04180	Cucurbita pepo (Zucchini)	cmocpeB796
CmoCh06G014140	Cp4.1LG03g10740	Cucurbita pepo (Zucchini)	cmocpeB787
CmoCh06G014140	Cla97C05G086360	Watermelon (97103) v2	cmowmbB833
CmoCh06G014140	Bhi01G000586	Wax gourd	cmowgoB1005
CmoCh06G014140	Carg17417	Silver-seed gourd	carcmoB0825
CmoCh06G014140	Carg23522	Silver-seed gourd	carcmoB1145

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh06G014140	CmoCh14G017490	Cucurbita moschata (Rifu)	cmocmoB224

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh06G014140	Watermelon (97103) v2	cmowmbB837
CmoCh06G014140	Watermelon (97103) v2	cmowmbB847
CmoCh06G014140	Wax gourd	cmowgoB0997
CmoCh06G014140	Cucurbita moschata (Rifu)	cmocmoB308
CmoCh06G014140	Cucurbita moschata (Rifu)	cmocmoB309
CmoCh06G014140	Cucurbita moschata (Rifu)	cmocmoB484
CmoCh06G014140	Cucurbita moschata (Rifu)	cmocmoB485
CmoCh06G014140	Cucumber (Gy14) v1	cgycmoB0718
CmoCh06G014140	Cucurbita maxima (Rimu)	cmacmoB362
CmoCh06G014140	Cucurbita maxima (Rimu)	cmacmoB364
CmoCh06G014140	Cucurbita maxima (Rimu)	cmacmoB910
CmoCh06G014140	Wild cucumber (PI 183967)	cmocpiB814
CmoCh06G014140	Cucumber (Chinese Long) v2	cmocuB806
CmoCh06G014140	Melon (DHL92) v3.5.1	cmomeB755
CmoCh06G014140	Watermelon (Charleston Gray)	cmowcgB721
CmoCh06G014140	Watermelon (Charleston Gray)	cmowcgB746
CmoCh06G014140	Watermelon (97103) v1	cmowmB772
CmoCh06G014140	Watermelon (97103) v1	cmowmB802
CmoCh06G014140	Cucurbita pepo (Zucchini)	cmocpeB765
CmoCh06G014140	Cucurbita pepo (Zucchini)	cmocpeB777
CmoCh06G014140	Bottle gourd (USVL1VR-Ls)	cmolsiB733
CmoCh06G014140	Bottle gourd (USVL1VR-Ls)	cmolsiB742
CmoCh06G014140	Cucumber (Gy14) v2	cgybcmoB401
CmoCh06G014140	Melon (DHL92) v3.6.1	cmomedB857
CmoCh06G014140	Silver-seed gourd	carcmoB0102
CmoCh06G014140	Silver-seed gourd	carcmoB0448
CmoCh06G014140	Cucumber (Chinese Long) v3	cmocucB0953