CmaCh06G014120 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh06G014120
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Structural constituent of ribosome protein
Location	Cma_Chr06 : 9087675 .. 9091473 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCACCTGTTTTGCTTGCGGCTTCGACTGAGATTAGGTTTTAATGCTTTTAATTTCTTAGCGGATCATGCACCTGTTTTGCTTGCGGCTTCGACTGAGATTAGGTTTTGCTATCTGTTTTATTTTGTGATTGGACTTATACCGGGGGTTCGTCTTTAAGTTGGTTGTTAAATATTCTTTAGCAGAAATTTGGAGTAGTTGCTTTTGTTTTGAAATTTGGCCTTCCTCGTGCTGACTTCTGTGTTTTTGTATATTGGCGCCAAAACCTTTTGGCTCAGCTCACAGCTGTTTGAGCAACTGTATTTTCTTTATGATATTTCTCTGAAATTAGAGTCTCAGGTGCTTGTTTGTTGTATTATGAACTATAATAGATGGTGGTTTCAGATTTTATTCCAACATATCGAGCTAGAACTCAATTCACTAATCAATGGTTCTGGCTTCATATTGCGCTTTTAAACTGTGGTTGAACCTTGAGTACTCTTCTTTTACTTTACTTTCCGTTGTTAGTATTGTTTTTGTCCATATTCAATGGAATTACGAGGTTTTGTTGGTAAATTTTACTTTCCGTTGTTAGTATTGTTTTTGTCCATATTCAATGGAATTACGAGGTTTTGTTGGTAAATGACTAGTAATTGGGGGATGGGTTGTGGTGATATCAGACTATGGTTTAGCTTTTTGGTGCTGTTTTTTTAAAAATTGAACTATGAAGGGTATCTATAGGTTAAGTTATCAAGGAAGTTGTCTTATTAAAAATTCAACTTCATGATTTTAGTCCCATCTATGCCAAAAGTGGATTTCCGGGAAGTTGTCTTATTAAAAATTCAACTTCATGATTTTAGTCCCATCTATGCCAAAAGTGGATTTCCGACTTTCATACAATGTGAGCAGGGGAGAAGGAAGTCTGTGCGGACTGCAAAGCCAGATTCTTAGTTTGATTTGAGGGATATCTGTACTGGCCATATCTTATGCTTAATTGACTTTTTCACCACTGGGTTTGGATTTGAGGGATATCTGTACTGGCCATATCTTATGCTTAATTGACTTTTTCACCACTGGGTTTGGATTTCTGACCACCATGGATGAAATGTAAGGAGAGAGCTTTTTTTGGATTGGTTTGCTTTTTTGGATTTAACCAATCCACCCAAATTGCAAATTAGATGCAATTTTAGGAATTAAGACATTTATGAGTTTTCCTCCTACGTCAAATTCAATTGAACAAAGTTAATTGTGAAAGTTTACAACATCAATCATTCAGCCCATCTGTTTGATGCTTTGCTTCTACGAGTTAATTCATTCACTACGGGTTGTATTGTTTTTTTGTCCTAGGCATTTGATATTCATGTAAATTGGTGGTCGGGATCCTTGGTTGTTCAAAATTTGAAGTGGCTTCATGTTCTTAAGGAGAGGGTTTTCTTTAATTAGTCCTCACTTTGTATTGAGGGCCTGCAGTTTTGGCTCAAAAGCATTAGCCAAGGGAATCCTTGGAAGCGAGAATGAAAGGGTAGCTCATTCAGATAGCATTGTAAATGGTTCATCCACGACTCAGCCATCTCCACTGTTTCCTGAGGGTAAACCTCATTCGGTTGCTTATGATGTTGAACTTATAGACGATGATACTTGGGCAGTTTCATTTAGTTTAGCTCGAGCATGGGAAGGGAGAGAGAAGGGCTCATCTGGCTTTGATAATAGATACTTCTTAGAGGATGAAGATCATGATCCAATTGATTATTGTGATTCAGAGTTTGATGATATTGACAACATGAGAATCCGGGGAAATCTCTTCTATAAACTTGATCGAGGTTCCAAAGAGTTTGAAGAATATAGCTTTGATTTTCATCGGAAGAAAAAATCTATAAAGGAAAAGGAAGATACGCAGCAAAACAAAAGTAAAGTGAATGATAAACCCAATAATCATTTGGCAAGTGGCCATGTAAAGCTTCCTGAACATGTGAAGAACAAATATGTAATAATTGAAAGGGAGAACAATGACTTTGAGAAGAAGCTTAGGACACCCACGTTTAATCAGCTTACTGCTCCTTACCATGAGCCATTTTGTCTTGATATATACATATCAAAAGCCTCTGTTCGAGCCTGCATCATTCACCGGGTCACCAGTAAGGTGGTTGCTGTGGCACATTCAATTTCTAAGGACATGAAATTTGACCTGACTTCAAGGAAGGATTCCTCTGCCTGTGCTGCTGTGGGGGCCGTTTTGGCCCAGAGAGCATTGGCTGATGATATCCACAATCTGGTATACACTCCAAGAAAAGGCGAGAGGATAGAAGGGAAGCTTCAAATCGTGCTTCAGTCTGTCATTGATAATGGGATTAATGTGAAAGTAAAGATTAAGCAGCAAAAGAGACCCAGAAAAGTTGGAAAGCCACCTTTAGCATAAGTCGGATGAAGAAAGATCATGAGGTTGCCCTTTTGACGTAAGACAACTTCCTTGATATACTGAGTAATATTGTTTTAGATCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCNTTGTCGAGATGTTTGAGTACATAAAGTTAAACAATTTCTTTTCTGAAATAAAACCCTTGTACAGTTTTCAATCTTGTTTAAAATCAAGGGTGCAACCATACTCATGTAGTACCACGAGTATACTGTTGGCTCAAGAAAACTTTCACATGTACCCTCATCACCCTCTGTCTTGCGCTTTCTACATCTGTTAAGACGAATGTGATCTCATCCTCCAACAGAGAGCCATTCCTTGCAAATCATCTCAATGATCACACACATACAACCCACGCTAGAATTTTTGGTATTGGGAGTTGCCATCCTCCGTCAAAGAGCCATTCCTTGCAAAACCAATCCATGATCACACACATACACAACTCACGCTAGAATTTTTGGTGTTTGGAGTTGTGTTGGATATTTCATGCGTGGATGAATGTTAAAAGTTATTCTACTAGTTTCTTAAGTTGTTTACCAAGTTTCTACCACATTACAGATCAAAATGGCAAGCGCAAGTGAGAGTGAACGCAAGGAACCTGTAAATGAGCAAATGGTTGCAAACATGTACGGTGCTTTAAGGTCTGAGCTTAATCAGATATATTCAAAAATCACAGAACTTGAAATGGAAGCGAGCGAGCACTCTCTTGTCATTTCTGCAATCGAACCACTTGATCCATCAAGAAGATGCTACAGAATGATTGGGGGAGTGCTGGTGGAAAGAACTATCAAGGAGGTTCTGCCCGCCGTTCAACACAACAAAGAGGGAATCGAGGAGGTCATTTCCAGACTCAATGAGGCCTTGGAGAAGAAAAAGAAGGAGATTGTTGACTTGGAGGCCAAATACAAGATCAAGATTAGAAAGCCTGATGGCGAGGCTAAGGAGGAAGACAGTGGGCGGAAAGAAGGTGCAGCTCAAGGAGTCCTCGTAGGCCCTGCAGGTGAAAACTAAACCCAACCCCATCGTGAACTTTAATCATATTCTTGTAGTGCTAAACCTTATAGTTTCATCCAGATGGTTCATTGCTATAATGCATATTTGTGTGAAATTTTGTTTAAACTTTCAGTTCTATAGGAAGATTCAGAACCTTTTTGGTACATAGATGATTTTGAGGGAAAAATTGAATGGGAACTAACTTTTTAGTGTTATGATATTGAAATTTTTCTCAAAGTCTTAGATTACCTCTTCACCAATGCATCAGTTTGA

mRNA sequence

ATGCACCTGTTTTGCTTGCGGCTTCGACTGAGATTAGGTTTTAATGCTTTTAATTTCTTAGCGGATCATGCACCTGTTTTGCTTGCGGCTTCGACTGAGATTAGGAGAGGGTTTTCTTTAATTAGTCCTCACTTTGTATTGAGGGCCTGCAGTTTTGGCTCAAAAGCATTAGCCAAGGGAATCCTTGGAAGCGAGAATGAAAGGGTAGCTCATTCAGATAGCATTGTAAATGGTTCATCCACGACTCAGCCATCTCCACTGTTTCCTGAGGGTAAACCTCATTCGGTTGCTTATGATGTTGAACTTATAGACGATGATACTTGGGCAGTTTCATTTAGTTTAGCTCGAGCATGGGAAGGGAGAGAGAAGGGCTCATCTGGCTTTGATAATAGATACTTCTTAGAGGATGAAGATCATGATCCAATTGATTATTGTGATTCAGAGTTTGATGATATTGACAACATGAGAATCCGGGGAAATCTCTTCTATAAACTTGATCGAGGTTCCAAAGAGTTTGAAGAATATAGCTTTGATTTTCATCGGAAGAAAAAATCTATAAAGGAAAAGGAAGATACGCAGCAAAACAAAAGTAAAGTGAATGATAAACCCAATAATCATTTGGCAAGTGGCCATGTAAAGCTTCCTGAACATGTGAAGAACAAATATGTAATAATTGAAAGGGAGAACAATGACTTTGAGAAGAAGCTTAGGACACCCACGTTTAATCAGCTTACTGCTCCTTACCATGAGCCATTTTGTCTTGATATATACATATCAAAAGCCTCTGTTCGAGCCTGCATCATTCACCGGGTCACCAGTAAGGTGGTTGCTGTGGCACATTCAATTTCTAAGGACATGAAATTTGACCTGACTTCAAGGAAGGATTCCTCTGCCTGTGCTGCTGTGGGGGCCGTTTTGGCCCAGAGAGCATTGGCTGATGATATCCACAATCTGGTATACACTCCAAGAAAAGGCGAGAGGATAGAAGGGAAGCTTCAAATCGTGCTTCAGTCTGTCATTGATAATGGGATTAATGTGAAAGTAAAGATTAAGCAGCAAAAGAGACCCAGAAAAATCAAAATGGCAAGCGCAAGTGAGAGTGAACGCAAGGAACCTGTAAATGAGCAAATGGTTGCAAACATGTACGGTGCTTTAAGGTCTGAGCTTAATCAGATATATTCAAAAATCACAGAACTTGAAATGGAAGCGAGCGAGCACTCTCTTGTCATTTCTGCAATCGAACCACTTGATCCATCAAGAAGATGCTACAGAATGATTGGGGGAGTGCTGGTGGAAAGAACTATCAAGGAGGTTCTGCCCGCCGTTCAACACAACAAAGAGGGAATCGAGGAGGTCATTTCCAGACTCAATGAGGCCTTGGAGAAGAAAAAGAAGGAGATTGTTGACTTGGAGGCCAAATACAAGATCAAGATTAGAAAGCCTGATGGCGAGGCTAAGGAGGAAGACAGTGGGCGGAAAGAAGGTGCAGCTCAAGGAGTCCTCGTAGGCCCTGCAGATTACCTCTTCACCAATGCATCAGTTTGA

Coding sequence (CDS)

ATGCACCTGTTTTGCTTGCGGCTTCGACTGAGATTAGGTTTTAATGCTTTTAATTTCTTAGCGGATCATGCACCTGTTTTGCTTGCGGCTTCGACTGAGATTAGGAGAGGGTTTTCTTTAATTAGTCCTCACTTTGTATTGAGGGCCTGCAGTTTTGGCTCAAAAGCATTAGCCAAGGGAATCCTTGGAAGCGAGAATGAAAGGGTAGCTCATTCAGATAGCATTGTAAATGGTTCATCCACGACTCAGCCATCTCCACTGTTTCCTGAGGGTAAACCTCATTCGGTTGCTTATGATGTTGAACTTATAGACGATGATACTTGGGCAGTTTCATTTAGTTTAGCTCGAGCATGGGAAGGGAGAGAGAAGGGCTCATCTGGCTTTGATAATAGATACTTCTTAGAGGATGAAGATCATGATCCAATTGATTATTGTGATTCAGAGTTTGATGATATTGACAACATGAGAATCCGGGGAAATCTCTTCTATAAACTTGATCGAGGTTCCAAAGAGTTTGAAGAATATAGCTTTGATTTTCATCGGAAGAAAAAATCTATAAAGGAAAAGGAAGATACGCAGCAAAACAAAAGTAAAGTGAATGATAAACCCAATAATCATTTGGCAAGTGGCCATGTAAAGCTTCCTGAACATGTGAAGAACAAATATGTAATAATTGAAAGGGAGAACAATGACTTTGAGAAGAAGCTTAGGACACCCACGTTTAATCAGCTTACTGCTCCTTACCATGAGCCATTTTGTCTTGATATATACATATCAAAAGCCTCTGTTCGAGCCTGCATCATTCACCGGGTCACCAGTAAGGTGGTTGCTGTGGCACATTCAATTTCTAAGGACATGAAATTTGACCTGACTTCAAGGAAGGATTCCTCTGCCTGTGCTGCTGTGGGGGCCGTTTTGGCCCAGAGAGCATTGGCTGATGATATCCACAATCTGGTATACACTCCAAGAAAAGGCGAGAGGATAGAAGGGAAGCTTCAAATCGTGCTTCAGTCTGTCATTGATAATGGGATTAATGTGAAAGTAAAGATTAAGCAGCAAAAGAGACCCAGAAAAATCAAAATGGCAAGCGCAAGTGAGAGTGAACGCAAGGAACCTGTAAATGAGCAAATGGTTGCAAACATGTACGGTGCTTTAAGGTCTGAGCTTAATCAGATATATTCAAAAATCACAGAACTTGAAATGGAAGCGAGCGAGCACTCTCTTGTCATTTCTGCAATCGAACCACTTGATCCATCAAGAAGATGCTACAGAATGATTGGGGGAGTGCTGGTGGAAAGAACTATCAAGGAGGTTCTGCCCGCCGTTCAACACAACAAAGAGGGAATCGAGGAGGTCATTTCCAGACTCAATGAGGCCTTGGAGAAGAAAAAGAAGGAGATTGTTGACTTGGAGGCCAAATACAAGATCAAGATTAGAAAGCCTGATGGCGAGGCTAAGGAGGAAGACAGTGGGCGGAAAGAAGGTGCAGCTCAAGGAGTCCTCGTAGGCCCTGCAGATTACCTCTTCACCAATGCATCAGTTTGA

Protein sequence

MHLFCLRLRLRLGFNAFNFLADHAPVLLAASTEIRRGFSLISPHFVLRACSFGSKALAKGILGSENERVAHSDSIVNGSSTTQPSPLFPEGKPHSVAYDVELIDDDTWAVSFSLARAWEGREKGSSGFDNRYFLEDEDHDPIDYCDSEFDDIDNMRIRGNLFYKLDRGSKEFEEYSFDFHRKKKSIKEKEDTQQNKSKVNDKPNNHLASGHVKLPEHVKNKYVIIERENNDFEKKLRTPTFNQLTAPYHEPFCLDIYISKASVRACIIHRVTSKVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRALADDIHNLVYTPRKGERIEGKLQIVLQSVIDNGINVKVKIKQQKRPRKIKMASASESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSRRCYRMIGGVLVERTIKEVLPAVQHNKEGIEEVISRLNEALEKKKKEIVDLEAKYKIKIRKPDGEAKEEDSGRKEGAAQGVLVGPADYLFTNASV

Homology

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BLAST of CmaCh06G014120 vs. Swiss-Prot
Match: PFD2_ARATH (Probable prefoldin subunit 2 OS=Arabidopsis thaliana GN=At3g22480 PE=2 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 2.0e-41
Identity = 97/146 (66.44%), Postives = 115/146 (78.77%), Query Frame = 1


Query: 361 MASASESER-KEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPS 420
           MAS S S   +EP NEQ V NMY   RSEL+QIYS IT+LEM+ SEHSLVI+AI+PLD S
Sbjct: 1   MASKSGSGGLREPPNEQAVLNMYEGKRSELSQIYSNITDLEMQVSEHSLVINAIQPLDQS 60

Query: 421 RRCYRMIGGVLVERTIKEVLPAVQHNKEGIEEVISRLNEALEKKKKEIVDLEAKYKIKIR 480
           R+C+RMIGGVLVERTIKEVLPAVQ NK+G+EEV+ +L E LEKKKK++ + EAKYKI+I 
Sbjct: 61  RKCFRMIGGVLVERTIKEVLPAVQRNKDGLEEVVRKLYETLEKKKKDLTEFEAKYKIRIT 120

Query: 481 KPDGEAKEEDSGRKEGAAQGVLVGPA 506
           K   E  +E   +KEG AQGVLVG A
Sbjct: 121 KQ--EDNKEGGNKKEGNAQGVLVGAA 144

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BLAST of CmaCh06G014120 vs. Swiss-Prot
Match: PFD2_DICDI (Probable prefoldin subunit 2 OS=Dictyostelium discoideum GN=pfdn2 PE=3 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 1.3e-21
Identity = 53/112 (47.32%), Postives = 81/112 (72.32%), Query Frame = 1


Query: 367 SERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSRRCYRMI 426
           S++K+ + E  +   Y  L+S+  QI S+I+E E +  E+ LVI+AI+ L+ +R+C+RM+
Sbjct: 2   SQQKQQLTENQIIEHYKDLKSQQQQIISRISEFESDVGEYGLVINAIQNLESNRKCFRMV 61

Query: 427 GGVLVERTIKEVLPAVQHNKEGIEEVISRLNEALEKKKKEIVDLEAKYKIKI 479
           GGVLVERT+ EVLP ++ N++GI+EV+ +L+E L  K KE+ D  A YKIKI
Sbjct: 62  GGVLVERTVGEVLPQIKQNRDGIKEVVKKLDENLSIKTKELNDFVALYKIKI 113

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BLAST of CmaCh06G014120 vs. Swiss-Prot
Match: PFD2_HUMAN (Prefoldin subunit 2 OS=Homo sapiens GN=PFDN2 PE=1 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 1.3e-21
Identity = 62/144 (43.06%), Postives = 91/144 (63.19%), Query Frame = 1


Query: 363 SASESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSRRC 422
           S+     K  V+ + V   +  LR E   + SK  ELEME +EHSLVI  ++ +D +R+C
Sbjct: 11  SSGSGAGKGAVSAEQVIAGFNRLRQEQRGLASKAAELEMELNEHSLVIDTLKEVDETRKC 70

Query: 423 YRMIGGVLVERTIKEVLPAVQHNKEGIEEVISRLNEALEKKKKEIVDLEAKYKIKI---- 482
           YRM+GGVLVERT+KEVLPA+++NKE I+++I  L + L+ K KE+ +   K+ I++    
Sbjct: 71  YRMVGGVLVERTVKEVLPALENNKEQIQKIIETLTQQLQAKGKELNEFREKHNIRLMGED 130

Query: 483 RKPDGEAKEEDSGRKEGAAQGVLV 503
            KP  +   E +G K  +A GVLV
Sbjct: 131 EKPAAKENSEGAGAKASSA-GVLV 153

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BLAST of CmaCh06G014120 vs. Swiss-Prot
Match: PFD2_BOVIN (Prefoldin subunit 2 OS=Bos taurus GN=PFDN2 PE=2 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 1.3e-21
Identity = 62/144 (43.06%), Postives = 91/144 (63.19%), Query Frame = 1


Query: 363 SASESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSRRC 422
           S+     K  V+ + V   +  LR E   + SK  ELEME +EHSLVI  ++ +D +R+C
Sbjct: 11  SSGSGTGKGAVSAEQVIAGFNRLRQEQRGLASKAAELEMELNEHSLVIDTLKEVDETRKC 70

Query: 423 YRMIGGVLVERTIKEVLPAVQHNKEGIEEVISRLNEALEKKKKEIVDLEAKYKIKI---- 482
           YRM+GGVLVERT+KEVLPA+++NKE I+++I  L + L+ K KE+ +   K+ I++    
Sbjct: 71  YRMVGGVLVERTVKEVLPALENNKEQIQKIIETLTQQLQAKGKELNEFREKHNIRLMGED 130

Query: 483 RKPDGEAKEEDSGRKEGAAQGVLV 503
            KP  +   E +G K  +A GVLV
Sbjct: 131 EKPAAKENSEGAGAKASSA-GVLV 153

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BLAST of CmaCh06G014120 vs. Swiss-Prot
Match: PFD2_RAT (Prefoldin subunit 2 OS=Rattus norvegicus GN=Pfdn2 PE=2 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 2.3e-21
Identity = 62/144 (43.06%), Postives = 90/144 (62.50%), Query Frame = 1


Query: 363 SASESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSRRC 422
           S      K  V+ + V   +  LR E   + SK  ELEME +EHSLVI  ++ +D +R+C
Sbjct: 11  SGGSGTGKGAVSAEQVIAGFNRLRQEQRGLASKAAELEMELNEHSLVIDTLKEVDETRKC 70

Query: 423 YRMIGGVLVERTIKEVLPAVQHNKEGIEEVISRLNEALEKKKKEIVDLEAKYKIKI---- 482
           YRM+GGVLVERT+KEVLPA++ NKE I+++I  L++ L+ K KE+ +   K+ I++    
Sbjct: 71  YRMVGGVLVERTVKEVLPALEGNKEQIQKIIETLSQQLQAKGKELNEFREKHNIRLMGED 130

Query: 483 RKPDGEAKEEDSGRKEGAAQGVLV 503
            KP  +   E +G K  +A GVLV
Sbjct: 131 EKPAAKENSEGAGAKSSSA-GVLV 153

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BLAST of CmaCh06G014120 vs. TrEMBL
Match: A0A0A0KSG6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G638320 PE=4 SV=1)

HSP 1 Score: 530.4 bits (1365), Expect = 2.4e-147
Identity = 270/326 (82.82%), Postives = 292/326 (89.57%), Query Frame = 1


Query: 34  IRRGFSLISPHFVLRACSFGSKALAKGILGSENERVAHSDSIVNGSSTTQPSPLFPEGKP 93
           +RRGF+  SP FVLRACSF SKA   G +GSENERVAHS+SI NGS   Q +PLFP+ KP
Sbjct: 3   LRRGFAFTSPQFVLRACSFCSKAFPGGSIGSENERVAHSNSIANGSCRPQLTPLFPDDKP 62

Query: 94  HSVAYDVELIDDDTWAVSFSLARAWEGREKGSSGFDNRYFLEDEDHDPIDYCDSEFDDID 153
            SVAYDVEL+DDDTWAVS  LARAWE REKG SGF+NRY LEDE HDP+DYCDS+FDDID
Sbjct: 63  CSVAYDVELVDDDTWAVSCGLARAWEAREKGWSGFENRYSLEDEAHDPVDYCDSDFDDID 122

Query: 154 NMRIRGNLFYKLDRGSKEFEEYSFDFHRKKKSIKEKEDTQQNKSKVNDKPNNHLASGHVK 213
           NMRIRGNLFYKLD+ SKEFEE S DFHRKKKS+KEKED  + +SKVNDK +  LASG VK
Sbjct: 123 NMRIRGNLFYKLDQASKEFEECSLDFHRKKKSLKEKEDMVKRRSKVNDKLDKCLASGQVK 182

Query: 214 LPEHVKNKYVIIERENNDFEKKLRTPTFNQLTAPYHEPFCLDIYISKASVRACIIHRVTS 273
           LPEH+KNKYVI+EREN+D EKKLRTPTFNQLT+PYHEPFCLDI+ISKASVRACIIHRVTS
Sbjct: 183 LPEHLKNKYVIVERENDDVEKKLRTPTFNQLTSPYHEPFCLDIFISKASVRACIIHRVTS 242

Query: 274 KVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRALADDIHNLVYTPRKGERIEGKLQ 333
           KVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRAL DDIHNL+YTPRKGERIEGKLQ
Sbjct: 243 KVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRALGDDIHNLIYTPRKGERIEGKLQ 302

Query: 334 IVLQSVIDNGINVKVKIKQQKRPRKI 360
           IVLQSVIDNGINV VKIKQQKRPRK+
Sbjct: 303 IVLQSVIDNGINVTVKIKQQKRPRKL 328

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BLAST of CmaCh06G014120 vs. TrEMBL
Match: W9QM55_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_004462 PE=4 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 1.4e-89
Identity = 195/347 (56.20%), Postives = 240/347 (69.16%), Query Frame = 1


Query: 34  IRRGFSL---ISPHFVLRACSFGSKALAKGILGSENERVAHSDSIVNGSSTTQPSPLFPE 93
           +RRG S    + PHF    C F SKA+   +   EN      DS+ N SS    SPLFP+
Sbjct: 4   LRRGISFALKVKPHFQSSYCGFCSKAIPSSVFDKEN------DSVTNYSSNLHLSPLFPD 63

Query: 94  GKP-HSVAYDVELIDDDTWAVSFSLARAWEGREKGSSGFDNRYFLEDEDHDPIDYC---- 153
            KP H   YD+EL+D+D W +S  LA+AW  RE+ SS       L+ E  D +D      
Sbjct: 64  AKPSHLSGYDIELVDNDAWQLSSGLAQAW--REETSS------LLKKEIADSVDNNGSQL 123

Query: 154 ---DSEFDDIDNMRIRGNLFYKLDRGSKEFEEYSFDFHRKKKSIKEKEDTQQNKSKVNDK 213
              D +FDDIDNMRI GNLFYK+DR SKE+EEYSFDFHR+KK  ++K D +++K K ND 
Sbjct: 124 GKGDPDFDDIDNMRIHGNLFYKIDRDSKEYEEYSFDFHRRKKPSQKKNDPEESKRKQNDS 183

Query: 214 -------PNNHLASGHVKLPEHVKNKYVIIER-----ENNDFEKKLRTPTFNQLTAPYHE 273
                  P+   AS   KLP+    K  ++        ++  +KKLRTPTFNQLT PYHE
Sbjct: 184 NEAKRDSPSVTAASTGEKLPKVANEKCGLMSPLGKTDSSSVGKKKLRTPTFNQLTGPYHE 243

Query: 274 PFCLDIYISKASVRACIIHRVTSKVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRA 333
           PFCLDIYISKASVRACI+HRVTSKVVAVAHSISKDMKFDL S ++ +AC AVG+VLAQRA
Sbjct: 244 PFCLDIYISKASVRACIVHRVTSKVVAVAHSISKDMKFDLASTRNLAACEAVGSVLAQRA 303

Query: 334 LADDIHNLVYTPRKGERIEGKLQIVLQSVIDNGINVKVKIKQQKRPR 358
           LADDIH++VYTPRKGER+EGKLQ+VLQS+IDNGIN+KVKIKQ+++ +
Sbjct: 304 LADDIHDVVYTPRKGERLEGKLQVVLQSIIDNGINMKVKIKQRRQKK 336

[Close]

BLAST of CmaCh06G014120 vs. TrEMBL
Match: M5XP25_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022034mg PE=4 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 1.5e-88
Identity = 195/340 (57.35%), Postives = 237/340 (69.71%), Query Frame = 1


Query: 39  SLISPHFVLRACSFGSKALAKGILGSENERVAHSDSIVNGSSTTQPSPLFP-EGKPHSVA 98
           S++ PHF+ RA SFG K+       +    +  S+ + N SS+   SPLFP + KPHS +
Sbjct: 11  SVVYPHFLSRARSFGPKS------NTTIPILHRSEQVSNYSSSFHLSPLFPSDAKPHSDS 70

Query: 99  YDVELIDDDTWAVSFSLARAWEGREKGSSGFDNRYFLEDEDHDPIDYC------DSEFDD 158
           YD+EL+D D W VS  LA A  G E  +S  ++ Y  E+   +P+D C      D +FDD
Sbjct: 71  YDIELVDHDAWLVSSGLALAGRGTEGTAS--ESSYLSEEVVDEPVDNCSLPVEGDPDFDD 130

Query: 159 IDNMRIRGNLFYKLDRGSKEFEEYSFDFHRKKKSIKEKEDTQQNKSKVN-------DKPN 218
           IDNMRIRG+LFYKLDR SKEFEEY+FDFHR+KKS K+K+D ++ K K N       D P 
Sbjct: 131 IDNMRIRGSLFYKLDRNSKEFEEYNFDFHRRKKSSKQKDDPKEIKRKSNELKESKTDSPI 190

Query: 219 NHLASGHVKLPEHVKNKYVIIERENNDFEKKLRTPTFNQLTAPYHEPFCLDIYISKASVR 278
             L S   K      N  +         +KKLRTPT+NQLT P+HEPFCLDIYISKASVR
Sbjct: 191 RDLFSRSEKQGRIANNSQLDEMDTACVGKKKLRTPTYNQLTGPFHEPFCLDIYISKASVR 250

Query: 279 ACIIHRVTSKVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRALADDIHNLVYTPRK 338
           ACIIHRVTSKVVAVAHSISKDMKFDL S ++++ACAAVGAVLAQRAL DDIH+++YTPRK
Sbjct: 251 ACIIHRVTSKVVAVAHSISKDMKFDLGSTRNAAACAAVGAVLAQRALGDDIHDVIYTPRK 310

Query: 339 GERIEGKLQIVLQSVIDNGINVKVKIKQQKRPRKIKMASA 365
           GER+EGKLQIVLQS+IDNGINVKVK+KQ  R +     SA
Sbjct: 311 GERLEGKLQIVLQSIIDNGINVKVKLKQITRKKPSSSYSA 342

[Close]

BLAST of CmaCh06G014120 vs. TrEMBL
Match: A0A067KVL4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02175 PE=4 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 2.0e-85
Identity = 190/351 (54.13%), Postives = 239/351 (68.09%), Query Frame = 1


Query: 39  SLISPHFVLRACSFGSKALAKGILGSENERVAHSD----SIVNGSSTTQPSPLFPEGKPH 98
           +L+S HF+L+ C+F SKA A       +   A  D    +  N SS     PLF E +PH
Sbjct: 13  TLLSSHFLLKVCTFRSKATAVVDNTDSSATKASVDKRQSASTNNSSKIHVPPLFSEERPH 72

Query: 99  SVAYDVELIDDDTWAVSFSLARAWEGREKGSSGFDNRYFLEDEDHDPIDYC--DSEFDDI 158
              YD+EL+D+DTW VS  LA  W G +K   G ++     DE  D +     DS+FD+I
Sbjct: 73  LDGYDIELVDNDTWQVSSGLAHVWRGLDK-EMGLESYTEAFDEQVDDVASLQDDSDFDEI 132

Query: 159 DNMRIRGNLFYKLDRGSKEFEEYSFDFHRKKKSIKEKEDTQQNKSKVNDKPNNHLASGHV 218
           DNMRIRGNLFYKLDR SKEFEEY FDFHRK  S K K++T+  + + + K NN   +   
Sbjct: 133 DNMRIRGNLFYKLDRDSKEFEEYRFDFHRKNSS-KRKDNTKGKEKEESAKNNNCKENKRN 192

Query: 219 KLPEHVK-------NKYVIIER-----------ENNDFEKKLRTPTFNQLTAPYHEPFCL 278
           + P H         ++ V I R            +   +KK+RTPTFNQLTAPYHEPFCL
Sbjct: 193 RNPSHSSAFEVEKCSQIVKIGRVYDLLLDNMVGSSGIEKKKVRTPTFNQLTAPYHEPFCL 252

Query: 279 DIYISKASVRACIIHRVTSKVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRALADD 338
           DIYISKASVRACIIHRVTSKVVAVAHSISKD+KFDL S ++++AC  VGA+LAQRALADD
Sbjct: 253 DIYISKASVRACIIHRVTSKVVAVAHSISKDIKFDLRSTRNAAACTTVGAILAQRALADD 312

Query: 339 IHNLVYTPRKGERIEGKLQIVLQSVIDNGINVKVKIKQQKRPRKIKMASAS 366
           IH+++YTPRKGER+EGKLQIVLQS+IDNGINVKVK+KQ+K P ++ ++ ++
Sbjct: 313 IHDVIYTPRKGERLEGKLQIVLQSIIDNGINVKVKLKQRK-PHEVSLSPSA 360

[Close]

BLAST of CmaCh06G014120 vs. TrEMBL
Match: V4RZ77_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005268mg PE=4 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 1.0e-84
Identity = 186/347 (53.60%), Postives = 236/347 (68.01%), Query Frame = 1


Query: 40  LISPHFVLRACSFGSKALAKGILGSENERVAHSDSIVNGSSTTQPSPLFPEGKPHSVAYD 99
           +++ HFV R  S+ S+A    I   ENER   S S    SS T  SPL     PH   Y+
Sbjct: 19  VVNSHFVSRVTSYCSRASNDFI--EENERPTSSRSY---SSRTNLSPLLSSKGPHFGGYN 78

Query: 100 VELIDDDTWAVSFSLARAWEGREKGSSGFDNRYFLEDEDHDPIDYCDSEFDDIDNMRIRG 159
           VEL+DD+TW VS  LA AW G ++      +   ++D+D       DS+FD+IDNMRIRG
Sbjct: 79  VELVDDETWQVSAGLAHAWRGLDEDKEAKSDVNVVDDDDDATSFEGDSDFDEIDNMRIRG 138

Query: 160 NLFYKLDRGSKEFEEYSFDFHR-----------------------------KKKSIKEKE 219
           +LFYKLD+ SKEFEEYSFDFHR                             KK+++K K 
Sbjct: 139 DLFYKLDKDSKEFEEYSFDFHRRKSSKTKEGNKDSEKKEASKAKTDKKECQKKEALKRKS 198

Query: 220 DTQQNKSKVNDKPNNHLASGHVKLPEHVKNKYVIIERENNDFEKKLRTPTFNQLTAPYHE 279
           D +++K K + +PN  LAS   +      NK V+    +++ EK++RTPTFNQLTAPYHE
Sbjct: 199 DAKESKRKESPRPN--LASRDDEF-----NKIVM---SDDNVEKRVRTPTFNQLTAPYHE 258

Query: 280 PFCLDIYISKASVRACIIHRVTSKVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRA 339
           PFCLDIYISKASVRACI+HRVTSKVV VAHSISKDMKFDL S ++++ACAAVG +LAQRA
Sbjct: 259 PFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDMKFDLDSTRNATACAAVGGILAQRA 318

Query: 340 LADDIHNLVYTPRKGERIEGKLQIVLQSVIDNGINVKVKIKQQKRPR 358
           LADDIH++VYTPRKGE++EGKLQIVLQ++IDNG+NVKVK+KQ+K+ +
Sbjct: 319 LADDIHDVVYTPRKGEKLEGKLQIVLQAIIDNGVNVKVKLKQRKQKK 350

[Close]

BLAST of CmaCh06G014120 vs. TAIR10
Match: AT3G22450.1 (AT3G22450.1 Ribosomal L18p/L5e family protein)

HSP 1 Score: 266.2 bits (679), Expect = 4.3e-71
Identity = 143/260 (55.00%), Postives = 192/260 (73.85%), Query Frame = 1


Query: 100 VELIDDDTWAVSFSLARAWEGREKGSSGFDNRYFLEDEDHDPIDYCDSEFDDIDNMRIRG 159
           +E +DDD W VS SL++AW  + +  +  ++   ++      +D  D + D+IDNMRIRG
Sbjct: 49  IETVDDDVWHVSSSLSQAWR-QFQADTAKNSPVTIQGVRETILDDEDPDHDEIDNMRIRG 108

Query: 160 NLFYKLDRGSKEFEEYSFDFHRKKKSIK-EKEDTQQNKSKVNDKPNNHLASGHVKLPEHV 219
           +LF+KLDRGSKEFEEY++DFHRK +    +KE  Q+ ++K+       +   + K  +  
Sbjct: 109 DLFFKLDRGSKEFEEYNYDFHRKNQHKNAKKEQNQEEETKIKKDNKKEVRDEYKKRNDSF 168

Query: 220 KNKYVIIERENNDFEKKLRTPTFNQLTAPYHEPFCLDIYISKASVRACIIHRVTSKVVAV 279
             +    +  N   +K+ RT TFNQLTAP+H PFCLDIYISK SVRAC+IHRVTSKVV V
Sbjct: 169 TGE---TDHPNEAVKKRERTFTFNQLTAPFHYPFCLDIYISKESVRACVIHRVTSKVVTV 228

Query: 280 AHSISKDMKFDLTSRKDSSACAAVGAVLAQRALADDIHNLVYTPRKGERIEGKLQIVLQS 339
           AHSISKDMKFDL SR++ +ACAAVGAVLAQR+L DDIH+++YTPRKG++IEGKLQ+VLQ+
Sbjct: 229 AHSISKDMKFDLGSRRNVAACAAVGAVLAQRSLEDDIHDVIYTPRKGDKIEGKLQVVLQA 288

Query: 340 VIDNGINVKVKIKQQKRPRK 359
           +IDNG+NVKVK+KQ+K  +K
Sbjct: 289 LIDNGVNVKVKLKQRKLKKK 304

[Close]

BLAST of CmaCh06G014120 vs. TAIR10
Match: AT3G22480.2 (AT3G22480.2 prefoldin 2)

HSP 1 Score: 171.8 bits (434), Expect = 1.1e-42
Identity = 97/146 (66.44%), Postives = 115/146 (78.77%), Query Frame = 1


Query: 361 MASASESER-KEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPS 420
           MAS S S   +EP NEQ V NMY   RSEL+QIYS IT+LEM+ SEHSLVI+AI+PLD S
Sbjct: 1   MASKSGSGGLREPPNEQAVLNMYEGKRSELSQIYSNITDLEMQVSEHSLVINAIQPLDQS 60

Query: 421 RRCYRMIGGVLVERTIKEVLPAVQHNKEGIEEVISRLNEALEKKKKEIVDLEAKYKIKIR 480
           R+C+RMIGGVLVERTIKEVLPAVQ NK+G+EEV+ +L E LEKKKK++ + EAKYKI+I 
Sbjct: 61  RKCFRMIGGVLVERTIKEVLPAVQRNKDGLEEVVRKLYETLEKKKKDLTEFEAKYKIRIT 120

Query: 481 KPDGEAKEEDSGRKEGAAQGVLVGPA 506
           K   E  +E   +KEG AQGVLVG A
Sbjct: 121 KQ--EDNKEGGNKKEGNAQGVLVGAA 144

[Close]

BLAST of CmaCh06G014120 vs. TAIR10
Match: AT1G08845.2 (AT1G08845.2 Ribosomal L18p/L5e family protein)

HSP 1 Score: 109.8 bits (273), Expect = 5.2e-24
Identity = 58/120 (48.33%), Postives = 81/120 (67.50%), Query Frame = 1


Query: 233 EKKLRTP----TFNQLTAPYHEPFCLDIYISKASVRACIIHRVTSKVVAVAHSISKDMKF 292
           EKK + P    +F Q T  Y EPF LD++ISK  V A + HRVT + VAVA + SKD+K 
Sbjct: 112 EKKSKNPDKHVSFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTCRQVAVAGTNSKDVKA 171

Query: 293 DLTSRKDSSACAAVGAVLAQRALADDIHNLVYTPRKGERIEGKLQIVLQSVIDNGINVKV 349
            L SR D  AC ++G +L++RA   D++   YTPR  ++ EGK++ V+QS+IDNGI+VK+
Sbjct: 172 VLRSRCDIPACMSIGRILSERAKEADVYTASYTPRDQDKFEGKIRAVVQSLIDNGIDVKI 231

[Close]

BLAST of CmaCh06G014120 vs. TAIR10
Match: AT3G20230.1 (AT3G20230.1 Ribosomal L18p/L5e family protein)

HSP 1 Score: 92.8 bits (229), Expect = 6.5e-19
Identity = 43/118 (36.44%), Postives = 78/118 (66.10%), Query Frame = 1


Query: 227 RENNDFEKKLRTPTFNQLTAPYHEPFCLDIYISKASVRACIIHRVTSKVVAVAHSISKDM 286
           R   +  K+    ++ Q T  Y  PF L+++ S+  + A ++HR TSKV++VA + ++D+
Sbjct: 66  RSRGEAAKRPNRKSWKQRTDMYMRPFLLNVFFSRKFIHAKVMHRPTSKVISVATTNARDI 125

Query: 287 KFDLTSRKDSSACAAVGAVLAQRALADDIHNLVYTPRKGERIEGKLQIVLQSVIDNGI 345
           + ++ S  D+ AC  +G ++A+R++  D++ + Y PRKGERIEGKL IV+ ++ ++GI
Sbjct: 126 RTNIPSLVDNEACRLIGKLIAERSMEADVYAVSYEPRKGERIEGKLGIVIDTIKEHGI 183

[Close]

BLAST of CmaCh06G014120 vs. TAIR10
Match: AT5G27820.1 (AT5G27820.1 Ribosomal L18p/L5e family protein)

HSP 1 Score: 52.4 bits (124), Expect = 9.8e-07
Identity = 28/99 (28.28%), Postives = 53/99 (53.54%), Query Frame = 1


Query: 248 YHEPFCLDIYISKASVRACIIHRVTSKVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLA 307
           Y +P+ L ++ +   V A +IH  T+ V   A S  K ++  +   +D +A + +G +L 
Sbjct: 15  YLKPYVLKMHFTNKFVHAQVIHSPTATVACSASSQEKALRETMDITRDVAAASKIGKILG 74

Query: 308 QRALADDIHNLVYTPRKGERIEGKLQIVLQSVIDNGINV 347
           +R L  DI  +    +K +R  GK++ V+ SV + G+ +
Sbjct: 75  ERLLMKDIPAVTIQMKKEQRYHGKVKAVIDSVREAGVKL 113

[Close]

BLAST of CmaCh06G014120 vs. NCBI nr
Match: gi|659118877|ref|XP_008459355.1| (PREDICTED: uncharacterized protein LOC103498514 [Cucumis melo])

HSP 1 Score: 535.8 bits (1379), Expect = 8.3e-149
Identity = 271/328 (82.62%), Postives = 297/328 (90.55%), Query Frame = 1


Query: 34  IRRGFSLISPHFVLRACSFGSKALAKGILGSENERVAHSDSIVNGSSTTQPSPLFPEGKP 93
           +RRGF+  SP  VLRACSF SKA   G +GSENERVAHS+SI NGSS  Q +PLFP+ KP
Sbjct: 3   LRRGFAFTSPQNVLRACSFCSKAFPGGSIGSENERVAHSNSIANGSSRPQLTPLFPDDKP 62

Query: 94  HSVAYDVELIDDDTWAVSFSLARAWEGREKGSSGFDNRYFLEDEDHDPIDYCDSEFDDID 153
            SVAYD+EL+DDDTWAVS  LARAWEGREKG SG +NRY LEDE HDP+DYCDS+FDDID
Sbjct: 63  RSVAYDIELVDDDTWAVSCGLARAWEGREKGWSGLENRYSLEDEAHDPVDYCDSDFDDID 122

Query: 154 NMRIRGNLFYKLDRGSKEFEEYSFDFHRKKKSIKEKEDTQQNKSKVNDKPNNHLASGHVK 213
           NMRIRGNLFYKLDRGSKEF+EYS DFHRKKKSIKEKE+ ++++SKVNDK +  L SG VK
Sbjct: 123 NMRIRGNLFYKLDRGSKEFDEYSLDFHRKKKSIKEKENREKSRSKVNDKLDKCLPSGQVK 182

Query: 214 LPEHVKNKYVIIERENNDFEKKLRTPTFNQLTAPYHEPFCLDIYISKASVRACIIHRVTS 273
           LPEH+KNKYVI+EREN+D EKKLRTPTFNQLT  YHEPFCLDIYISKASVRACIIHRVTS
Sbjct: 183 LPEHLKNKYVIVERENDDVEKKLRTPTFNQLTGLYHEPFCLDIYISKASVRACIIHRVTS 242

Query: 274 KVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRALADDIHNLVYTPRKGERIEGKLQ 333
           KVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRALADDIHNL+YTPRKGERIEGKLQ
Sbjct: 243 KVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRALADDIHNLIYTPRKGERIEGKLQ 302

Query: 334 IVLQSVIDNGINVKVKIKQQKRPRKIKM 362
           +VLQSVIDNGINVKVKIKQQKRPRK+++
Sbjct: 303 VVLQSVIDNGINVKVKIKQQKRPRKLEV 330

[Close]

BLAST of CmaCh06G014120 vs. NCBI nr
Match: gi|778707360|ref|XP_011656005.1| (PREDICTED: uncharacterized protein LOC101213193 [Cucumis sativus])

HSP 1 Score: 530.4 bits (1365), Expect = 3.5e-147
Identity = 270/326 (82.82%), Postives = 292/326 (89.57%), Query Frame = 1


Query: 34  IRRGFSLISPHFVLRACSFGSKALAKGILGSENERVAHSDSIVNGSSTTQPSPLFPEGKP 93
           +RRGF+  SP FVLRACSF SKA   G +GSENERVAHS+SI NGS   Q +PLFP+ KP
Sbjct: 3   LRRGFAFTSPQFVLRACSFCSKAFPGGSIGSENERVAHSNSIANGSCRPQLTPLFPDDKP 62

Query: 94  HSVAYDVELIDDDTWAVSFSLARAWEGREKGSSGFDNRYFLEDEDHDPIDYCDSEFDDID 153
            SVAYDVEL+DDDTWAVS  LARAWE REKG SGF+NRY LEDE HDP+DYCDS+FDDID
Sbjct: 63  CSVAYDVELVDDDTWAVSCGLARAWEAREKGWSGFENRYSLEDEAHDPVDYCDSDFDDID 122

Query: 154 NMRIRGNLFYKLDRGSKEFEEYSFDFHRKKKSIKEKEDTQQNKSKVNDKPNNHLASGHVK 213
           NMRIRGNLFYKLD+ SKEFEE S DFHRKKKS+KEKED  + +SKVNDK +  LASG VK
Sbjct: 123 NMRIRGNLFYKLDQASKEFEECSLDFHRKKKSLKEKEDMVKRRSKVNDKLDKCLASGQVK 182

Query: 214 LPEHVKNKYVIIERENNDFEKKLRTPTFNQLTAPYHEPFCLDIYISKASVRACIIHRVTS 273
           LPEH+KNKYVI+EREN+D EKKLRTPTFNQLT+PYHEPFCLDI+ISKASVRACIIHRVTS
Sbjct: 183 LPEHLKNKYVIVERENDDVEKKLRTPTFNQLTSPYHEPFCLDIFISKASVRACIIHRVTS 242

Query: 274 KVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRALADDIHNLVYTPRKGERIEGKLQ 333
           KVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRAL DDIHNL+YTPRKGERIEGKLQ
Sbjct: 243 KVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRALGDDIHNLIYTPRKGERIEGKLQ 302

Query: 334 IVLQSVIDNGINVKVKIKQQKRPRKI 360
           IVLQSVIDNGINV VKIKQQKRPRK+
Sbjct: 303 IVLQSVIDNGINVTVKIKQQKRPRKL 328

[Close]

BLAST of CmaCh06G014120 vs. NCBI nr
Match: gi|703078547|ref|XP_010090920.1| (hypothetical protein L484_004462 [Morus notabilis])

HSP 1 Score: 338.6 bits (867), Expect = 1.9e-89
Identity = 195/347 (56.20%), Postives = 240/347 (69.16%), Query Frame = 1


Query: 34  IRRGFSL---ISPHFVLRACSFGSKALAKGILGSENERVAHSDSIVNGSSTTQPSPLFPE 93
           +RRG S    + PHF    C F SKA+   +   EN      DS+ N SS    SPLFP+
Sbjct: 4   LRRGISFALKVKPHFQSSYCGFCSKAIPSSVFDKEN------DSVTNYSSNLHLSPLFPD 63

Query: 94  GKP-HSVAYDVELIDDDTWAVSFSLARAWEGREKGSSGFDNRYFLEDEDHDPIDYC---- 153
            KP H   YD+EL+D+D W +S  LA+AW  RE+ SS       L+ E  D +D      
Sbjct: 64  AKPSHLSGYDIELVDNDAWQLSSGLAQAW--REETSS------LLKKEIADSVDNNGSQL 123

Query: 154 ---DSEFDDIDNMRIRGNLFYKLDRGSKEFEEYSFDFHRKKKSIKEKEDTQQNKSKVNDK 213
              D +FDDIDNMRI GNLFYK+DR SKE+EEYSFDFHR+KK  ++K D +++K K ND 
Sbjct: 124 GKGDPDFDDIDNMRIHGNLFYKIDRDSKEYEEYSFDFHRRKKPSQKKNDPEESKRKQNDS 183

Query: 214 -------PNNHLASGHVKLPEHVKNKYVIIER-----ENNDFEKKLRTPTFNQLTAPYHE 273
                  P+   AS   KLP+    K  ++        ++  +KKLRTPTFNQLT PYHE
Sbjct: 184 NEAKRDSPSVTAASTGEKLPKVANEKCGLMSPLGKTDSSSVGKKKLRTPTFNQLTGPYHE 243

Query: 274 PFCLDIYISKASVRACIIHRVTSKVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRA 333
           PFCLDIYISKASVRACI+HRVTSKVVAVAHSISKDMKFDL S ++ +AC AVG+VLAQRA
Sbjct: 244 PFCLDIYISKASVRACIVHRVTSKVVAVAHSISKDMKFDLASTRNLAACEAVGSVLAQRA 303

Query: 334 LADDIHNLVYTPRKGERIEGKLQIVLQSVIDNGINVKVKIKQQKRPR 358
           LADDIH++VYTPRKGER+EGKLQ+VLQS+IDNGIN+KVKIKQ+++ +
Sbjct: 304 LADDIHDVVYTPRKGERLEGKLQVVLQSIIDNGINMKVKIKQRRQKK 336

[Close]

BLAST of CmaCh06G014120 vs. NCBI nr
Match: gi|1009141421|ref|XP_015888185.1| (PREDICTED: uncharacterized protein LOC107423173 [Ziziphus jujuba])

HSP 1 Score: 338.2 bits (866), Expect = 2.5e-89
Identity = 194/339 (57.23%), Postives = 233/339 (68.73%), Query Frame = 1


Query: 35  RRGFSL---ISPHFVLRACSFGSKALAKGILGSENERVAHSDSIVNGSSTTQPSPLFPEG 94
           RRG  L   + PHF L   S      +  ++  E E V H   +    S    SPLFP+ 
Sbjct: 4   RRGMILALALKPHF-LSGVSCSCSNASSTVVNREAEVVTHFVPVAYYCSRLHLSPLFPDS 63

Query: 95  KPHSVAYDVELIDDDTWAVSFSLARAWEGREKGSSGFDNRYFLEDEDHDPIDYC------ 154
           KP S  Y++EL+D D W +S  LA+AW+G +  + G  +         + +D C      
Sbjct: 64  KPSSNGYEIELVDHDAWRLSSGLAQAWQGMDGAAMGTSSL------SEEVVDNCSQPGQE 123

Query: 155 DSEFDDIDNMRIRGNLFYKLDRGSKEFEEYSFDFHRKKKSIKEKEDTQQNKSKVNDKPNN 214
           D +FD+IDNMRIRGNLFYKLDRGSKEFEEYSFDFHR KKS+K+K+D    K K N+ P  
Sbjct: 124 DPDFDEIDNMRIRGNLFYKLDRGSKEFEEYSFDFHRYKKSLKKKDDP---KEKKNESPRQ 183

Query: 215 HLASGHVKLPEHVKNKYVIIERENNDFE------KKLRTPTFNQLTAPYHEPFCLDIYIS 274
           ++AS   KLP+ V NK   +    ++ E      KKLR PTFNQLT PYHEPFCLDIYIS
Sbjct: 184 NVASVSDKLPK-VLNKKSGLMSPTDEIESTCVGKKKLRAPTFNQLTGPYHEPFCLDIYIS 243

Query: 275 KASVRACIIHRVTSKVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRALADDIHNLV 334
           KASVRACI+HR TSKVVAVAHSISKDMKFDL S +DS ACAAVG VLAQRALADDIH+++
Sbjct: 244 KASVRACIVHRATSKVVAVAHSISKDMKFDLASTRDSVACAAVGTVLAQRALADDIHDVI 303

Query: 335 YTPRKGERIEGKLQIVLQSVIDNGINVKVKIKQQKRPRK 359
           YTPRKGER+EGKL  VLQS++DNGINVKVKIK Q+RP+K
Sbjct: 304 YTPRKGERLEGKLHFVLQSIMDNGINVKVKIK-QRRPKK 330

[Close]

BLAST of CmaCh06G014120 vs. NCBI nr
Match: gi|596293289|ref|XP_007226643.1| (hypothetical protein PRUPE_ppa022034mg [Prunus persica])

HSP 1 Score: 335.1 bits (858), Expect = 2.1e-88
Identity = 195/340 (57.35%), Postives = 237/340 (69.71%), Query Frame = 1


Query: 39  SLISPHFVLRACSFGSKALAKGILGSENERVAHSDSIVNGSSTTQPSPLFP-EGKPHSVA 98
           S++ PHF+ RA SFG K+       +    +  S+ + N SS+   SPLFP + KPHS +
Sbjct: 11  SVVYPHFLSRARSFGPKS------NTTIPILHRSEQVSNYSSSFHLSPLFPSDAKPHSDS 70

Query: 99  YDVELIDDDTWAVSFSLARAWEGREKGSSGFDNRYFLEDEDHDPIDYC------DSEFDD 158
           YD+EL+D D W VS  LA A  G E  +S  ++ Y  E+   +P+D C      D +FDD
Sbjct: 71  YDIELVDHDAWLVSSGLALAGRGTEGTAS--ESSYLSEEVVDEPVDNCSLPVEGDPDFDD 130

Query: 159 IDNMRIRGNLFYKLDRGSKEFEEYSFDFHRKKKSIKEKEDTQQNKSKVN-------DKPN 218
           IDNMRIRG+LFYKLDR SKEFEEY+FDFHR+KKS K+K+D ++ K K N       D P 
Sbjct: 131 IDNMRIRGSLFYKLDRNSKEFEEYNFDFHRRKKSSKQKDDPKEIKRKSNELKESKTDSPI 190

Query: 219 NHLASGHVKLPEHVKNKYVIIERENNDFEKKLRTPTFNQLTAPYHEPFCLDIYISKASVR 278
             L S   K      N  +         +KKLRTPT+NQLT P+HEPFCLDIYISKASVR
Sbjct: 191 RDLFSRSEKQGRIANNSQLDEMDTACVGKKKLRTPTYNQLTGPFHEPFCLDIYISKASVR 250

Query: 279 ACIIHRVTSKVVAVAHSISKDMKFDLTSRKDSSACAAVGAVLAQRALADDIHNLVYTPRK 338
           ACIIHRVTSKVVAVAHSISKDMKFDL S ++++ACAAVGAVLAQRAL DDIH+++YTPRK
Sbjct: 251 ACIIHRVTSKVVAVAHSISKDMKFDLGSTRNAAACAAVGAVLAQRALGDDIHDVIYTPRK 310

Query: 339 GERIEGKLQIVLQSVIDNGINVKVKIKQQKRPRKIKMASA 365
           GER+EGKLQIVLQS+IDNGINVKVK+KQ  R +     SA
Sbjct: 311 GERLEGKLQIVLQSIIDNGINVKVKLKQITRKKPSSSYSA 342

The following BLAST results are available for this feature:

BLAST of CmaCh06G014120 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PFD2_ARATH	2.0e-41	66.44	Probable prefoldin subunit 2 OS=Arabidopsis thaliana GN=At3g22480 PE=2 SV=1	[more]
PFD2_DICDI	1.3e-21	47.32	Probable prefoldin subunit 2 OS=Dictyostelium discoideum GN=pfdn2 PE=3 SV=1	[more]
PFD2_HUMAN	1.3e-21	43.06	Prefoldin subunit 2 OS=Homo sapiens GN=PFDN2 PE=1 SV=1	[more]
PFD2_BOVIN	1.3e-21	43.06	Prefoldin subunit 2 OS=Bos taurus GN=PFDN2 PE=2 SV=1	[more]
PFD2_RAT	2.3e-21	43.06	Prefoldin subunit 2 OS=Rattus norvegicus GN=Pfdn2 PE=2 SV=1	[more]

BLAST of CmaCh06G014120 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KSG6_CUCSA	2.4e-147	82.82	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G638320 PE=4 SV=1	[more]
W9QM55_9ROSA	1.4e-89	56.20	Uncharacterized protein OS=Morus notabilis GN=L484_004462 PE=4 SV=1	[more]
M5XP25_PRUPE	1.5e-88	57.35	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022034mg PE=4 SV=1	[more]
A0A067KVL4_JATCU	2.0e-85	54.13	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02175 PE=4 SV=1	[more]
V4RZ77_9ROSI	1.0e-84	53.60	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005268mg PE=4 SV=1	[more]

BLAST of CmaCh06G014120 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G22450.1	4.3e-71	55.00	Ribosomal L18p/L5e family protein	[more]
AT3G22480.2	1.1e-42	66.44	prefoldin 2	[more]
AT1G08845.2	5.2e-24	48.33	Ribosomal L18p/L5e family protein	[more]
AT3G20230.1	6.5e-19	36.44	Ribosomal L18p/L5e family protein	[more]
AT5G27820.1	9.8e-07	28.28	Ribosomal L18p/L5e family protein	[more]

BLAST of CmaCh06G014120 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659118877\|ref\|XP_008459355.1\|	8.3e-149	82.62	PREDICTED: uncharacterized protein LOC103498514 [Cucumis melo]	[more]
gi\|778707360\|ref\|XP_011656005.1\|	3.5e-147	82.82	PREDICTED: uncharacterized protein LOC101213193 [Cucumis sativus]	[more]
gi\|703078547\|ref\|XP_010090920.1\|	1.9e-89	56.20	hypothetical protein L484_004462 [Morus notabilis]	[more]
gi\|1009141421\|ref\|XP_015888185.1\|	2.5e-89	57.23	PREDICTED: uncharacterized protein LOC107423173 [Ziziphus jujuba]	[more]
gi\|596293289\|ref\|XP_007226643.1\|	2.1e-88	57.35	hypothetical protein PRUPE_ppa022034mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002777	PFD_beta-like
IPR005484	Ribosomal_L18
IPR009053	Prefoldin

Vocabulary: **Biological Process**
Term	Definition
GO:0006457	protein folding
GO:0006412	translation

Vocabulary: **Cellular Component**
Term	Definition
GO:0016272	prefoldin complex
GO:0005622	intracellular
GO:0005840	ribosome

Vocabulary: **Molecular Function**
Term	Definition
GO:0051082	unfolded protein binding
GO:0003735	structural constituent of ribosome

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006412	translation
cellular_component	GO:0016272	prefoldin complex
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005622	intracellular
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0051082	unfolded protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh06G014120.1	CmaCh06G014120.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002777	Prefoldin beta-like	PFAM	PF01920	Prefoldin_2	coord: 376..479 score: 5.5
IPR005484	Ribosomal protein L18	PFAM	PF00861	Ribosomal_L18p	coord: 254..345 score: 9.
IPR009053	Prefoldin	GENE3D	G3DSA:1.10.287.370		coord: 378..474 score: 5.1
IPR009053	Prefoldin	unknown	SSF46579	Prefoldin	coord: 379..476 score: 3.66
None	No IPR available	unknown	Coil	Coil	coord: 382..402 score: -coord: 446..480 scor
None	No IPR available	GENE3D	G3DSA:3.30.420.100		coord: 250..345 score: 2.5
None	No IPR available	PANTHER	PTHR12899	39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL	coord: 105..364 score: 4.5E
None	No IPR available	PANTHER	PTHR12899:SF9	EXPRESSED PROTEIN	coord: 105..364 score: 4.5E
None	No IPR available	unknown	SSF53137	Translational machinery components	coord: 235..344 score: 1.33

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh06G014120	Cla021627	Watermelon (97103) v1	cmawmB798
CmaCh06G014120	ClCG05G005160	Watermelon (Charleston Gray)	cmawcgB737
CmaCh06G014120	CmoCh14G017490	Cucurbita moschata (Rifu)	cmacmoB797
CmaCh06G014120	CmoCh06G014140	Cucurbita moschata (Rifu)	cmacmoB829
CmaCh06G014120	Lsi05G016030	Bottle gourd (USVL1VR-Ls)	cmalsiB764
CmaCh06G014120	Cp4.1LG08g04180	Cucurbita pepo (Zucchini)	cmacpeB853
CmaCh06G014120	Cp4.1LG03g10740	Cucurbita pepo (Zucchini)	cmacpeB837
CmaCh06G014120	Cla97C05G086360	Watermelon (97103) v2	cmawmbB856
CmaCh06G014120	Bhi01G000586	Wax gourd	cmawgoB1006
CmaCh06G014120	Carg17417	Silver-seed gourd	carcmaB0849
CmaCh06G014120	Carg23522	Silver-seed gourd	carcmaB1177

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh06G014120	CmaCh14G017060	Cucurbita maxima (Rimu)	cmacmaB284

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh06G014120	Cucurbita maxima (Rimu)	cmacmaB369
CmaCh06G014120	Cucurbita maxima (Rimu)	cmacmaB372
CmaCh06G014120	Cucurbita maxima (Rimu)	cmacmaB554
CmaCh06G014120	Cucurbita maxima (Rimu)	cmacmaB555
CmaCh06G014120	Cucumber (Gy14) v1	cgycmaB0727
CmaCh06G014120	Cucurbita moschata (Rifu)	cmacmoB837
CmaCh06G014120	Cucurbita moschata (Rifu)	cmacmoB838
CmaCh06G014120	Wild cucumber (PI 183967)	cmacpiB826
CmaCh06G014120	Cucumber (Chinese Long) v2	cmacuB814
CmaCh06G014120	Melon (DHL92) v3.5.1	cmameB763
CmaCh06G014120	Watermelon (Charleston Gray)	cmawcgB717
CmaCh06G014120	Watermelon (Charleston Gray)	cmawcgB745
CmaCh06G014120	Watermelon (97103) v1	cmawmB778
CmaCh06G014120	Watermelon (97103) v1	cmawmB811
CmaCh06G014120	Cucurbita pepo (Zucchini)	cmacpeB810
CmaCh06G014120	Cucurbita pepo (Zucchini)	cmacpeB824
CmaCh06G014120	Bottle gourd (USVL1VR-Ls)	cmalsiB741
CmaCh06G014120	Bottle gourd (USVL1VR-Ls)	cmalsiB749
CmaCh06G014120	Cucumber (Gy14) v2	cgybcmaB427
CmaCh06G014120	Melon (DHL92) v3.6.1	cmamedB863
CmaCh06G014120	Silver-seed gourd	carcmaB0094
CmaCh06G014120	Silver-seed gourd	carcmaB0457
CmaCh06G014120	Cucumber (Chinese Long) v3	cmacucB0965
CmaCh06G014120	Watermelon (97103) v2	cmawmbB865
CmaCh06G014120	Watermelon (97103) v2	cmawmbB873
CmaCh06G014120	Wax gourd	cmawgoB0999