Carg23522 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg23522
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Prefoldin subunit 2
Location	Cucurbita_argyrosperma_scaffold_278 : 155536 .. 158893 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCTCTTTCCATCTCGCTGTTCGCACTCTCGCAGCAGTTGTTCGAAGTCGTCGACTCCTCGAATCGCTCATCACTTGGCTTCACTATCAGCGCTGATTAGCGGCATCGATCCAGTATGTTTTGTTTTCTGTTCATCTCTTTCTCGCTCATTTTCATCCACTTCTTTTAAGTTTGCGATCGAATGCTTTTAATTTCTTTGCGGACCATGTACATGTTTTGCTTGCGGCTTCGACTGAGATTAGGTTTTGCTATTCGTTTGTGTTTTGAGTAAATGCTGGACTATGTACCCTGCTCGAAGGGTTTAGGGATTTGTTCTATCGTATTGAATCGTTTGTCCCTTTAGTAACAGGACCGATACCTGTGGTTTGTCTTTAAGTTGTTTGCTGAACATTCCGTAGCAGAAATTTGGAGTTAGTTGTTTTCAATTTGAAATTTGGCCTTCGTTATATTGTGTTTTTGCAAGTAGGCACCAGTACCTCTTGGCTCAGTTCACGATTGTTTAAGTATTTGTAGTTTTTGGTATGGTCTTCCTCTGAAATTGGGATCTCAGGTGTTTGTTTGTTGTATTGTGAACTATAAAGGACGATCTTTTAAGACTTTACCCCAACTTATTGAGCTAGAACTCAATTCCTTAATCGACGGTTCTTAGCTTGAAACTTCGTTGTTTTTCTCAACTGCTTCACTTACCTTTCCGTGCTTAATGTTAATTTTGATCTCATTCAATGAAGTAACATTATTGTTGTTACGGGAATTTGTTGGTAAGCTTCTAGTAGTTGGAGGATGGGGTAGTGGTGATTTCAGACTATGGTTTAGCTGCTTGGTGCTGCCTTTCTTGAAATTAAACTCTGAAAGGCATCCTATATGTCCAGTTTATCAAGGAAGTTGTCTTACTCAGAACTAAACTTCATGATTTTCATCCCATCTATGCTCAAAGTGGACTTCCAGCTTTCCTACATTGTGAGCAGGGAGGAAGGAAGTCTGTGCGGACTGCAATGTTTGTTTCTTTGTTTGATTTGAGGGATATCTGCACTGGGGGGCACTAGATGTTGGCTATTTCTTATGTTTGGCTGACTTTCGCTGCTGGTTTTGAGTTCTGAGTCTTTGACTACCATCGTCAAAATTGGAGGAGAAAGTTGAAGACGAACTTTGATCAACTCATTGAATCGAAGTATCGAACAGATGGCTGAATTTGACATAGCGGATGAAGATCATGAGGTTGCTCTTTTGATGTAAGACAACTTCCTTGATGTGTGAACGGCCAAGTAATATTGTAATTGATCCCTGTAACAGCCCTAATCTACCACTAGCAGATATTTTCCTCTTTGGATTTTCCCTTTCGGGCTTCCCCTCAAGGCTTTTAAAATGCGTTTGCTAGGGATTGGTTTCCACACCCTTATAAAGAATGTTTCGTTCTCCTCCTCAACTGATGTGGGATCTCACAATTCATCCCCCTTCGGAGCCCAGCGTCCTCGCTAGCACTCGTTCCCTTCTCCAATCGATGTAGGACCCTCCAATCCACCCCCCTCCCCTCTTCGGGACCCAGTGTTCTTTTCAGTCTCCTCGCTGGCACATCGCTCGATGTGTGACTCTGATACCATTTGTAACAGCTTAAGCCCACCACTAGCATAATTGTCCTCTTTAGGCTTCCCCCCTCCCCCCCGAAGGTTTCTAAAACGCGTCTGCTAGGGAGAGATTTTCTCACCCTTGTAAAGAATGCTTCGTTCTCCTCCCCAACCGATGTGGGATCTCACACCCCCCTACCCCCTTCTCTGCGATGAGTTTATTTTTACTTATTGTCTTTCTATTTTCAAGTTCTTTCAGTATATAAAAGCGTACAGTTTCATTTCCGCACCAAAAAACTTAATTCATTCCTATCTAGAATTAAGGATGCAACTATACTCATGTAGAACCACGAAGACACCGTTTGTTGAAGAAAACTATCTATCCTCCTCACCTTCTTTCTTCGCTCTCTACGTCTGTTTAGACAATATGATCTCATCCTCCACGAGAAAGCCTTTCCTTGCGAAAATTCTCCGTGAATATACACATACCAAGTCATGCTAGAATTTTGGGGTTGGGAGTTGTATTGGATAATTCCTGTGGATGGAAGTACAAAGTAAGTCTTCCTTTAGTATTGTAAATTGTTTACTAAGTTTCTACCACTTCACAGATCAAAATGGCGAGCTCAAGTGAGAGTGAACGCAAGGAACCAGTGAACGAGCAAATGGTTGCAAACATGTATGGTGCTTTAAGGTCTGAGCTCAATCAGATATACTCAAAAATCACAGAACTTGAGATGGAAGTCAGTGAACACTCTCTGGTCATTTCTGCAATTGAGCCACTTGATCCATCAAGACGATGCTACAGAATGATCGGGGGAGTGCTGGTGGAAAGAACTATCAAAGAGGTCCTGCCCGCTGTTCAACGCAACAAAGAGGGACTTGAGGAGGTGATTTCCAGACTCAATGAGGCATTGGAGAAGAAAAAGAAGGAAATTTCTGACTTGGAGGCCAAATACAAGATCAGGATTCGAAAGCCTGATGGTGAGGCTAAGGAGGAAGACAGTGGGCGGAAAGAGGGTGCAGCCCAAGGAGTCTTAGTAGGCCCTGCAAGTGAAAGTTAAAACTCTCAACCCCATTGGTGCATTTTAATCATATTCTTGTAGTGCTAAACTTTAATTTTCATGCGGATGATTCACTGTTTTTAAGCGCGTTTGTGTGAAATTTTGTTGACAACTTTCAGTTCAATAGGATGATTCCAGGACTTGTGTGGTATATAGATGATTTTGAGGGAGGATATATTGAATGGGAACCGACTTTTCAGCGTTTAGATATCGAAAATTTCCCATTAGTTTGATCATATGCTGCAATGGATTCTGTACTTGAGCTTTCAGATTCAAGAGGATATTACAAAGCAGTCTCTTCCTTATCCTCTCAGCTCAATATGATTTTCTTAAGGTTACAAATGAAGTAAAGAAAACCAAATAGTCATAATCGAAGCCTCCTTATCCTCTCAGCTAAAGAAATCCTGAACTCCTTTTCCGGCGAAAACTCGATCGGACAGCTCCGCCAGTAAGGCATTCACAGTGAGCAAAACGACACTAGAACCAGCAATAACGCCGATCACCACCCCCGTCGTGCCCAAAACCTTTCGAAACGCCGGCCACTCAATCTTCTGAATCTCCTCCGCCACTCCCCCAATCAGGTCCCCCTCTTTCTCCACCTTCCGCTGCTTCAAAGCCTCCTGAATTTCGGCGCCCAAATTCTCGCCAGATTCTGCCGGTTGATCAGCCGTTTTCGATTCCTCCCTCGGCGGCCCAGCTTGAACCTCCACCCCATCAGATTCTGTATTCTCTTGG

mRNA sequence

CCCTCTTTCCATCTCGCTGTTCGCACTCTCGCAGCAGTTGTTCGAAGTCGTCGACTCCTCGAATCGCTCATCACTTGGCTTCACTATCAGCGCTGATTAGCGGCATCGATCCAATCAAAATGGCGAGCTCAAGTGAGAGTGAACGCAAGGAACCAGTGAACGAGCAAATGGTTGCAAACATGTATGGTGCTTTAAGGTCTGAGCTCAATCAGATATACTCAAAAATCACAGAACTTGAGATGGAAGTCAGTGAACACTCTCTGGTCATTTCTGCAATTGAGCCACTTGATCCATCAAGACGATGCTACAGAATGATCGGGGGAGTGCTGGTGGAAAGAACTATCAAAGAGGTCCTGCCCGCTGTTCAACGCAACAAAGAGGGACTTGAGGAGGTGATTTCCAGACTCAATGAGGCATTGGAGAAGAAAAAGAAGGAAATTTCTGACTTGGAGGCCAAATACAAGATCAGGATTCGAAAGCCTGATGGTGAGGCTAAGGAGGAAGACAGTGGGCGGAAAGAGGGTGCAGCCCAAGGAGTCTTAGTAGGCCCTGCAAGTGAAAGTTAAAACTCTCAACCCCATTGGTGCATTTTAATCATATTCTTGTAGTGCTAAACTTTAATTTTCATGCGGATGATTCACTGTTTTTAAGCGCGTTTGTGTGAAATTTTGTTGACAACTTTCAGTTCAATAGGATGATTCCAGGACTTGTGTGGTATATAGATGATTTTGAGGGAGGATATATTGAATGGGAACCGACTTTTCAGCGTTTAGATATCGAAAATTTCCCATTAGTTTGATCATATGCTGCAATGGATTCTGTACTTGAGCTTTCAGATTCAAGAGGATATTACAAAGCAGTCTCTTCCTTATCCTCTCAGCTCAATATGATTTTCTTAAGGTTACAAATGAAGTAAAGAAAACCAAATAGTCATAATCGAAGCCTCCTTATCCTCTCAGCTAAAGAAATCCTGAACTCCTTTTCCGGCGAAAACTCGATCGGACAGCTCCGCCAGTAAGGCATTCACAGTGAGCAAAACGACACTAGAACCAGCAATAACGCCGATCACCACCCCCGTCGTGCCCAAAACCTTTCGAAACGCCGGCCACTCAATCTTCTGAATCTCCTCCGCCACTCCCCCAATCAGGTCCCCCTCTTTCTCCACCTTCCGCTGCTTCAAAGCCTCCTGAATTTCGGCGCCCAAATTCTCGCCAGATTCTGCCGGTTGATCAGCCGTTTTCGATTCCTCCCTCGGCGGCCCAGCTTGAACCTCCACCCCATCAGATTCTGTATTCTCTTGG

Coding sequence (CDS)

ATGGCGAGCTCAAGTGAGAGTGAACGCAAGGAACCAGTGAACGAGCAAATGGTTGCAAACATGTATGGTGCTTTAAGGTCTGAGCTCAATCAGATATACTCAAAAATCACAGAACTTGAGATGGAAGTCAGTGAACACTCTCTGGTCATTTCTGCAATTGAGCCACTTGATCCATCAAGACGATGCTACAGAATGATCGGGGGAGTGCTGGTGGAAAGAACTATCAAAGAGGTCCTGCCCGCTGTTCAACGCAACAAAGAGGGACTTGAGGAGGTGATTTCCAGACTCAATGAGGCATTGGAGAAGAAAAAGAAGGAAATTTCTGACTTGGAGGCCAAATACAAGATCAGGATTCGAAAGCCTGATGGTGAGGCTAAGGAGGAAGACAGTGGGCGGAAAGAGGGTGCAGCCCAAGGAGTCTTAGTAGGCCCTGCAAGTGAAAGTTAA

Protein sequence

MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSRRCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRKPDGEAKEEDSGRKEGAAQGVLVGPASES

Homology

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BLAST of Carg23522 vs. NCBI nr
Match: XP_022956082.1 (probable prefoldin subunit 2 [Cucurbita moschata] >XP_022956083.1 probable prefoldin subunit 2 [Cucurbita moschata])

HSP 1 Score: 273.1 bits (697), Expect = 5.6e-70
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 1   MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSR 60
           MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSR
Sbjct: 1   MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSR 60

Query: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK 120
           RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK
Sbjct: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK 120

Query: 121 PDGEAKEEDSGRKEGAAQGVLVGPASES 149
           PDGEAKEEDSGRKEGAAQGVLVGPASES
Sbjct: 121 PDGEAKEEDSGRKEGAAQGVLVGPASES 148

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BLAST of Carg23522 vs. NCBI nr
Match: XP_022979430.1 (probable prefoldin subunit 2 [Cucurbita maxima] >XP_022979432.1 probable prefoldin subunit 2 [Cucurbita maxima])

HSP 1 Score: 271.9 bits (694), Expect = 1.2e-69
Identity = 147/148 (99.32%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 1   MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSR 60
           MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSR
Sbjct: 1   MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSR 60

Query: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK 120
           RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK
Sbjct: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK 120

Query: 121 PDGEAKEEDSGRKEGAAQGVLVGPASES 149
           PDGEAKEEDSGRKEGAAQGVLVGPA+ES
Sbjct: 121 PDGEAKEEDSGRKEGAAQGVLVGPANES 148

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BLAST of Carg23522 vs. NCBI nr
Match: XP_023528202.1 (probable prefoldin subunit 2 [Cucurbita pepo subsp. pepo] >XP_023528203.1 probable prefoldin subunit 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 271.6 bits (693), Expect = 1.6e-69
Identity = 147/148 (99.32%), Postives = 147/148 (99.32%), Query Frame = 0


Query: 1   MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSR 60
           MASSSESERKEPVNEQMVANMYG LRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSR
Sbjct: 1   MASSSESERKEPVNEQMVANMYGTLRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSR 60

Query: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK 120
           RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK
Sbjct: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK 120

Query: 121 PDGEAKEEDSGRKEGAAQGVLVGPASES 149
           PDGEAKEEDSGRKEGAAQGVLVGPASES
Sbjct: 121 PDGEAKEEDSGRKEGAAQGVLVGPASES 148

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BLAST of Carg23522 vs. NCBI nr
Match: XP_004141456.1 (PREDICTED: probable prefoldin subunit 2 [Cucumis sativus] >KGN52492.1 hypothetical protein Csa_5G638310 [Cucumis sativus])

HSP 1 Score: 270.0 bits (689), Expect = 4.7e-69
Identity = 146/148 (98.65%), Postives = 146/148 (98.65%), Query Frame = 0


Query: 1   MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSR 60
           MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEME SEHSLVISAIEPLDPSR
Sbjct: 1   MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSR 60

Query: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK 120
           RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK
Sbjct: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK 120

Query: 121 PDGEAKEEDSGRKEGAAQGVLVGPASES 149
           PDGEAKEEDSGRKEGAAQGVLVGPA ES
Sbjct: 121 PDGEAKEEDSGRKEGAAQGVLVGPAGES 148

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BLAST of Carg23522 vs. NCBI nr
Match: XP_008459357.1 (PREDICTED: probable prefoldin subunit 2 [Cucumis melo] >XP_008459358.1 PREDICTED: probable prefoldin subunit 2 [Cucumis melo])

HSP 1 Score: 266.2 bits (679), Expect = 6.8e-68
Identity = 145/148 (97.97%), Postives = 146/148 (98.65%), Query Frame = 0


Query: 1   MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSR 60
           MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSR
Sbjct: 1   MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSR 60

Query: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK 120
           RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRL+EALEKKKKEISDLEAKYKIRIRK
Sbjct: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLHEALEKKKKEISDLEAKYKIRIRK 120

Query: 121 PDGEAKEEDSGRKEGAAQGVLVGPASES 149
            DGEAKEEDSGRKEGAAQGVLVGPA ES
Sbjct: 121 HDGEAKEEDSGRKEGAAQGVLVGPAGES 148

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BLAST of Carg23522 vs. TAIR10
Match: AT3G22480.2 (prefoldin 2)

HSP 1 Score: 179.1 bits (453), Expect = 2.0e-45
Identity = 103/149 (69.13%), Postives = 120/149 (80.54%), Query Frame = 0


Query: 1   MASSSES-ERKEPVNEQMVANMYGALRSELNQIYSKITELEMEVSEHSLVISAIEPLDPS 60
           MAS S S   +EP NEQ V NMY   RSEL+QIYS IT+LEM+VSEHSLVI+AI+PLD S
Sbjct: 1   MASKSGSGGLREPPNEQAVLNMYEGKRSELSQIYSNITDLEMQVSEHSLVINAIQPLDQS 60

Query: 61  RRCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIR 120
           R+C+RMIGGVLVERTIKEVLPAVQRNK+GLEEV+ +L E LEKKKK++++ EAKYKIRI 
Sbjct: 61  RKCFRMIGGVLVERTIKEVLPAVQRNKDGLEEVVRKLYETLEKKKKDLTEFEAKYKIRIT 120

Query: 121 KPDGEAKEEDSGRKEGAAQGVLVGPASES 149
           K   E  +E   +KEG AQGVLVG AS S
Sbjct: 121 KQ--EDNKEGGNKKEGNAQGVLVGAASSS 147

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BLAST of Carg23522 vs. Swiss-Prot
Match: sp|Q9LJ98|PFD2_ARATH (Probable prefoldin subunit 2 OS=Arabidopsis thaliana OX=3702 GN=At3g22480 PE=2 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 3.6e-44
Identity = 103/149 (69.13%), Postives = 120/149 (80.54%), Query Frame = 0


Query: 1   MASSSES-ERKEPVNEQMVANMYGALRSELNQIYSKITELEMEVSEHSLVISAIEPLDPS 60
           MAS S S   +EP NEQ V NMY   RSEL+QIYS IT+LEM+VSEHSLVI+AI+PLD S
Sbjct: 1   MASKSGSGGLREPPNEQAVLNMYEGKRSELSQIYSNITDLEMQVSEHSLVINAIQPLDQS 60

Query: 61  RRCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIR 120
           R+C+RMIGGVLVERTIKEVLPAVQRNK+GLEEV+ +L E LEKKKK++++ EAKYKIRI 
Sbjct: 61  RKCFRMIGGVLVERTIKEVLPAVQRNKDGLEEVVRKLYETLEKKKKDLTEFEAKYKIRIT 120

Query: 121 KPDGEAKEEDSGRKEGAAQGVLVGPASES 149
           K   E  +E   +KEG AQGVLVG AS S
Sbjct: 121 KQ--EDNKEGGNKKEGNAQGVLVGAASSS 147

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BLAST of Carg23522 vs. Swiss-Prot
Match: sp|A1A4P5|PFD2_BOVIN (Prefoldin subunit 2 OS=Bos taurus OX=9913 GN=PFDN2 PE=2 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 6.0e-23
Identity = 63/144 (43.75%), Postives = 92/144 (63.89%), Query Frame = 0


Query: 3   SSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSRRC 62
           SS     K  V+ + V   +  LR E   + SK  ELEME++EHSLVI  ++ +D +R+C
Sbjct: 11  SSGSGTGKGAVSAEQVIAGFNRLRQEQRGLASKAAELEMELNEHSLVIDTLKEVDETRKC 70

Query: 63  YRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRI---- 122
           YRM+GGVLVERT+KEVLPA++ NKE ++++I  L + L+ K KE+++   K+ IR+    
Sbjct: 71  YRMVGGVLVERTVKEVLPALENNKEQIQKIIETLTQQLQAKGKELNEFREKHNIRLMGED 130

Query: 123 RKPDGEAKEEDSGRKEGAAQGVLV 143
            KP  +   E +G K  +A GVLV
Sbjct: 131 EKPAAKENSEGAGAKASSA-GVLV 153

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BLAST of Carg23522 vs. Swiss-Prot
Match: sp|Q9UHV9|PFD2_HUMAN (Prefoldin subunit 2 OS=Homo sapiens OX=9606 GN=PFDN2 PE=1 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 6.0e-23
Identity = 63/144 (43.75%), Postives = 92/144 (63.89%), Query Frame = 0


Query: 3   SSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSRRC 62
           SS     K  V+ + V   +  LR E   + SK  ELEME++EHSLVI  ++ +D +R+C
Sbjct: 11  SSGSGAGKGAVSAEQVIAGFNRLRQEQRGLASKAAELEMELNEHSLVIDTLKEVDETRKC 70

Query: 63  YRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRI---- 122
           YRM+GGVLVERT+KEVLPA++ NKE ++++I  L + L+ K KE+++   K+ IR+    
Sbjct: 71  YRMVGGVLVERTVKEVLPALENNKEQIQKIIETLTQQLQAKGKELNEFREKHNIRLMGED 130

Query: 123 RKPDGEAKEEDSGRKEGAAQGVLV 143
            KP  +   E +G K  +A GVLV
Sbjct: 131 EKPAAKENSEGAGAKASSA-GVLV 153

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BLAST of Carg23522 vs. Swiss-Prot
Match: sp|Q55GN3|PFD2_DICDI (Probable prefoldin subunit 2 OS=Dictyostelium discoideum OX=44689 GN=pfdn2 PE=3 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.3e-22
Identity = 52/112 (46.43%), Postives = 84/112 (75.00%), Query Frame = 0


Query: 7   SERKEPVNEQMVANMYGALRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSRRCYRMI 66
           S++K+ + E  +   Y  L+S+  QI S+I+E E +V E+ LVI+AI+ L+ +R+C+RM+
Sbjct: 2   SQQKQQLTENQIIEHYKDLKSQQQQIISRISEFESDVGEYGLVINAIQNLESNRKCFRMV 61

Query: 67  GGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRI 119
           GGVLVERT+ EVLP +++N++G++EV+ +L+E L  K KE++D  A YKI+I
Sbjct: 62  GGVLVERTVGEVLPQIKQNRDGIKEVVKKLDENLSIKTKELNDFVALYKIKI 113

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BLAST of Carg23522 vs. Swiss-Prot
Match: sp|B0BN18|PFD2_RAT (Prefoldin subunit 2 OS=Rattus norvegicus OX=10116 GN=Pfdn2 PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.7e-22
Identity = 62/144 (43.06%), Postives = 92/144 (63.89%), Query Frame = 0


Query: 3   SSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSRRC 62
           S      K  V+ + V   +  LR E   + SK  ELEME++EHSLVI  ++ +D +R+C
Sbjct: 11  SGGSGTGKGAVSAEQVIAGFNRLRQEQRGLASKAAELEMELNEHSLVIDTLKEVDETRKC 70

Query: 63  YRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRI---- 122
           YRM+GGVLVERT+KEVLPA++ NKE ++++I  L++ L+ K KE+++   K+ IR+    
Sbjct: 71  YRMVGGVLVERTVKEVLPALEGNKEQIQKIIETLSQQLQAKGKELNEFREKHNIRLMGED 130

Query: 123 RKPDGEAKEEDSGRKEGAAQGVLV 143
            KP  +   E +G K  +A GVLV
Sbjct: 131 EKPAAKENSEGAGAKSSSA-GVLV 153

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BLAST of Carg23522 vs. TrEMBL
Match: tr|A0A0A0KVR4|A0A0A0KVR4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G638310 PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 3.1e-69
Identity = 146/148 (98.65%), Postives = 146/148 (98.65%), Query Frame = 0


Query: 1   MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSR 60
           MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEME SEHSLVISAIEPLDPSR
Sbjct: 1   MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSR 60

Query: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK 120
           RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK
Sbjct: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK 120

Query: 121 PDGEAKEEDSGRKEGAAQGVLVGPASES 149
           PDGEAKEEDSGRKEGAAQGVLVGPA ES
Sbjct: 121 PDGEAKEEDSGRKEGAAQGVLVGPAGES 148

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BLAST of Carg23522 vs. TrEMBL
Match: tr|A0A1S3C9H2|A0A1S3C9H2_CUCME (probable prefoldin subunit 2 OS=Cucumis melo OX=3656 GN=LOC103498515 PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 4.5e-68
Identity = 145/148 (97.97%), Postives = 146/148 (98.65%), Query Frame = 0


Query: 1   MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSR 60
           MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSR
Sbjct: 1   MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSR 60

Query: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK 120
           RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRL+EALEKKKKEISDLEAKYKIRIRK
Sbjct: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLHEALEKKKKEISDLEAKYKIRIRK 120

Query: 121 PDGEAKEEDSGRKEGAAQGVLVGPASES 149
            DGEAKEEDSGRKEGAAQGVLVGPA ES
Sbjct: 121 HDGEAKEEDSGRKEGAAQGVLVGPAGES 148

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BLAST of Carg23522 vs. TrEMBL
Match: tr|A0A2P5FWI4|A0A2P5FWI4_9ROSA (Prefoldin subunit OS=Trema orientalis OX=63057 GN=TorRG33x02_019470 PE=4 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 8.6e-59
Identity = 125/148 (84.46%), Postives = 136/148 (91.89%), Query Frame = 0


Query: 1   MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSR 60
           MAS  E + +EPVNEQ+VANMY +LRSELNQIYSKITELEMEVSEHSLVI+A++PLDPSR
Sbjct: 1   MASKVEGDHREPVNEQVVANMYASLRSELNQIYSKITELEMEVSEHSLVINAVQPLDPSR 60

Query: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK 120
           RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVI+RLNEALEKKKKEISDLEAKYKIRIRK
Sbjct: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVIARLNEALEKKKKEISDLEAKYKIRIRK 120

Query: 121 PDGEAKEEDSGRKEGAAQGVLVGPASES 149
            DG   +++SGRKEG AQGVLVGPA  S
Sbjct: 121 GDGNESKDESGRKEGTAQGVLVGPAGGS 148

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BLAST of Carg23522 vs. TrEMBL
Match: tr|A0A2P5E3G8|A0A2P5E3G8_PARAD (Prefoldin subunit OS=Parasponia andersonii OX=3476 GN=PanWU01x14_005100 PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 1.9e-58
Identity = 125/148 (84.46%), Postives = 136/148 (91.89%), Query Frame = 0


Query: 1   MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSR 60
           MAS  E + +EPVNEQ+VANMY +LRSELNQIYSKITELEMEVSEHSLVI+AI+PL+PSR
Sbjct: 1   MASKVEGDHREPVNEQVVANMYASLRSELNQIYSKITELEMEVSEHSLVINAIQPLEPSR 60

Query: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK 120
           RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVI+RLNEALEKKKKEISDLEAKYKIRIRK
Sbjct: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVIARLNEALEKKKKEISDLEAKYKIRIRK 120

Query: 121 PDGEAKEEDSGRKEGAAQGVLVGPASES 149
            DG   +++SGRKEG AQGVLVGPA  S
Sbjct: 121 GDGNESKDESGRKEGTAQGVLVGPAGGS 148

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BLAST of Carg23522 vs. TrEMBL
Match: tr|A0A2P4MN98|A0A2P4MN98_QUESU (Putative prefoldin subunit 2 OS=Quercus suber OX=58331 GN=CFP56_26435 PE=4 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 8.0e-57
Identity = 121/148 (81.76%), Postives = 136/148 (91.89%), Query Frame = 0


Query: 1   MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSR 60
           MAS +E E++EP+NEQ VAN Y ++R+ELNQIYSKITELEMEV EHSLVI+AI+PLDP+R
Sbjct: 35  MASRAEDEQREPINEQAVANKYASMRTELNQIYSKITELEMEVGEHSLVINAIQPLDPTR 94

Query: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK 120
           RC+RMIGGVLVERTI+EVLPAVQRNKEGLEEVI+RLNEALEKKKKEISD EAKYKIRIRK
Sbjct: 95  RCFRMIGGVLVERTIQEVLPAVQRNKEGLEEVIARLNEALEKKKKEISDFEAKYKIRIRK 154

Query: 121 PDGEAKEEDSGRKEGAAQGVLVGPASES 149
           PDGE K +D GRKEG+AQGVLVGPA  S
Sbjct: 155 PDGETK-DDGGRKEGSAQGVLVGPAGGS 181

The following BLAST results are available for this feature:

BLAST of Carg23522 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022956082.1	5.6e-70	100.00	probable prefoldin subunit 2 [Cucurbita moschata] >XP_022956083.1 probable prefo...	[more]
XP_022979430.1	1.2e-69	99.32	probable prefoldin subunit 2 [Cucurbita maxima] >XP_022979432.1 probable prefold...	[more]
XP_023528202.1	1.6e-69	99.32	probable prefoldin subunit 2 [Cucurbita pepo subsp. pepo] >XP_023528203.1 probab...	[more]
XP_004141456.1	4.7e-69	98.65	PREDICTED: probable prefoldin subunit 2 [Cucumis sativus] >KGN52492.1 hypothetic...	[more]
XP_008459357.1	6.8e-68	97.97	PREDICTED: probable prefoldin subunit 2 [Cucumis melo] >XP_008459358.1 PREDICTED...	[more]

BLAST of Carg23522 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G22480.2	2.0e-45	69.13	prefoldin 2	[more]

BLAST of Carg23522 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LJ98\|PFD2_ARATH	3.6e-44	69.13	Probable prefoldin subunit 2 OS=Arabidopsis thaliana OX=3702 GN=At3g22480 PE=2 S...	[more]
sp\|A1A4P5\|PFD2_BOVIN	6.0e-23	43.75	Prefoldin subunit 2 OS=Bos taurus OX=9913 GN=PFDN2 PE=2 SV=1	[more]
sp\|Q9UHV9\|PFD2_HUMAN	6.0e-23	43.75	Prefoldin subunit 2 OS=Homo sapiens OX=9606 GN=PFDN2 PE=1 SV=1	[more]
sp\|Q55GN3\|PFD2_DICDI	1.3e-22	46.43	Probable prefoldin subunit 2 OS=Dictyostelium discoideum OX=44689 GN=pfdn2 PE=3 ...	[more]
sp\|B0BN18\|PFD2_RAT	1.7e-22	43.06	Prefoldin subunit 2 OS=Rattus norvegicus OX=10116 GN=Pfdn2 PE=2 SV=1	[more]

BLAST of Carg23522 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KVR4\|A0A0A0KVR4_CUCSA	3.1e-69	98.65	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G638310 PE=4 SV=1	[more]
tr\|A0A1S3C9H2\|A0A1S3C9H2_CUCME	4.5e-68	97.97	probable prefoldin subunit 2 OS=Cucumis melo OX=3656 GN=LOC103498515 PE=4 SV=1	[more]
tr\|A0A2P5FWI4\|A0A2P5FWI4_9ROSA	8.6e-59	84.46	Prefoldin subunit OS=Trema orientalis OX=63057 GN=TorRG33x02_019470 PE=4 SV=1	[more]
tr\|A0A2P5E3G8\|A0A2P5E3G8_PARAD	1.9e-58	84.46	Prefoldin subunit OS=Parasponia andersonii OX=3476 GN=PanWU01x14_005100 PE=4 SV=...	[more]
tr\|A0A2P4MN98\|A0A2P4MN98_QUESU	8.0e-57	81.76	Putative prefoldin subunit 2 OS=Quercus suber OX=58331 GN=CFP56_26435 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0051082	unfolded protein binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0016272	prefoldin complex

Vocabulary: **Biological Process**
Term	Definition
GO:0006457	protein folding

Vocabulary: **INTERPRO**
Term	Definition
IPR027235	PFD2
IPR009053	Prefoldin
IPR002777	PFD_beta-like

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
cellular_component	GO:0016272	prefoldin complex
molecular_function	GO:0051082	unfolded protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg23522-RA	Carg23522-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 22..42
None	No IPR available	COILS	Coil	Coil	coord: 79..120
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 118..148
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 118..134
None	No IPR available	SUPERFAMILY	SSF46579	Prefoldin	coord: 19..117
IPR002777	Prefoldin beta-like	PFAM	PF01920	Prefoldin_2	coord: 16..118 e-value: 7.0E-26 score: 90.2
IPR009053	Prefoldin	GENE3D	G3DSA:1.10.287.370		coord: 12..122 e-value: 1.9E-25 score: 90.9
IPR027235	Prefoldin subunit 2	PANTHER	PTHR13303	PREFOLDIN SUBUNIT 2	coord: 8..143

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg23522	Cla021627	Watermelon (97103) v1	carwmB0849
Carg23522	ClCG05G005160	Watermelon (Charleston Gray)	carwcgB0821
Carg23522	CmaCh06G014120	Cucurbita maxima (Rimu)	carcmaB1177
Carg23522	CmaCh14G017060	Cucurbita maxima (Rimu)	carcmaB1174
Carg23522	CmoCh06G014140	Cucurbita moschata (Rifu)	carcmoB1145
Carg23522	CmoCh14G017490	Cucurbita moschata (Rifu)	carcmoB1142
Carg23522	Lsi05G016030	Bottle gourd (USVL1VR-Ls)	carlsiB772
Carg23522	Cp4.1LG08g04180	Cucurbita pepo (Zucchini)	carcpeB1184
Carg23522	Cp4.1LG03g10740	Cucurbita pepo (Zucchini)	carcpeB1183
Carg23522	Cla97C05G086360	Watermelon (97103) v2	carwmbB0883
Carg23522	Bhi01G000586	Wax gourd	carwgoB0988

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg23522	Carg17418	Silver-seed gourd	carcarB545

The following block(s) are covering this gene:


Gene	Organism	Block
Carg23522	Cucumber (Gy14) v2	carcgybB0838
Carg23522	Cucumber (Gy14) v1	carcgyB0970
Carg23522	Wild cucumber (PI 183967)	carcpiB0884
Carg23522	Cucumber (Chinese Long) v2	carcuB0865
Carg23522	Cucumber (Chinese Long) v3	carcucB0889
Carg23522	Melon (DHL92) v3.5.1	carmeB0839
Carg23522	Melon (DHL92) v3.6.1	carmedB0850
Carg23522	Watermelon (Charleston Gray)	carwcgB0820
Carg23522	Watermelon (97103) v2	carwmbB0886