Cp4.1LG03g10740 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG03g10740
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionPrefoldin subunit 2 family protein
LocationCp4.1LG03 : 11508818 .. 11514003 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACCCTCGAGAAGTGACGCAACTCACCGTATGGCCCAATTTTCTTTAACTCGCTGTTCCTCCCCCCTTTCCATCTCGCTGTTTGCACTCTCGCAGCTAGCGCAGTTGTTCGAAGTCGTCGACTCCTCGAATCGCTCATCACTTGGCTTCACTATCAGCGCTGATTAGCGGCATCGATCAAGTATGTTTTGTTTTCTGTTCATCTCTTTCTCGCTCATTTTCATCCACTTCTTTTAAGTTTGCGATCGAATGTTTTTAATTTCTTTGCGGACCATGTACATGTTTTGCTTGCGGCTTCGACTGAGATTAGGTTTTGCTATTCGTTTGTGTTTTGAGTAAATGCTGGACTATGTACCCTGCTCGAAGGGGTTAGGGATTTGTTCTATCGTATTGAATCGTTTGTCCCTTTAGTAACAGGACTGATACCTGTGGTTCGTCTTTAAGTTGTTTGCTGAGCATTCCGTAGCAGAAATTTGGAGTTAGTTGTTTTCAATTTGAAATTTGGCCTTCGTTATATTGTGTTTTTGCAAGTAGGCACCAGTACCTCTTGGCTCAGTTCACGATTGTTTAAGTATTTGTAGTTTTTGGTATGGTCTTCCTCTGAAATTGGGATCTCAGGTGTTTGTTTGTTGTATTGTGAACTATAAAGGACGATCTTGTAAGACTTTACCCCAACTTATTGAGCTAGAACTCAATTCCTTAATCGACGGTTCTTAGCTTGAAACTTCGTTGTTTTTCTCAACTGCTTCACTTACCTTTCCGTGCTTAATGTTAATTTTGATCTCATTCAATGAAGTAACATTATTGTTACGGGAATTTGTTGGTAAGCTTCTAGTAGTTGGAGGATGGGGTAGTGGTGATTTCAGACTATGGTTTAGCTGCTTGGTGCTGCCTTTCTTGAAATTAAACTCTGAAAGGCATCCTATATGTCCAGTTTATCAAGGAAGTTGTCTTACTCAGAACTAAACTTCATGATTTTCATCCCATCTATGCTCAAAGTGGACTTCCAGCTTTCCTACATTGTGAGCAGGGAGAAAGGAGGTCTGTGCGGACTGCAATGTTTGTTTCTTTGTTTGATTTGAGGGATATCTGCACTGGGGGGCACTAGATGTTGGCTATTTCTTATGTTTGGCTGACTTTCGCTGCTGGTTTTGTTCTGAGTCTTTGACCACCATCGACAAAATGGGAGGAGAAAGTTGAAGACGAACTTTGATCAACCCATTGAATCGAAGTATCGAACAGATGGCTGAATTTGACATAGCGGATGAAGATCATGAGGTTGCTCTTTTGATGTAAGACAACTTCCTTGATGTGCGAACGACTAAGTAATATTGTAATTGATCCCTGTAACAGCCCAAATCTACCACTAACAGATATTGTCCTCTTTGGATTTTCCCTTTCGGGCTTCCCCTCAAGGCTTTTAAAATGCGTTTGCTAGGGATTGGTTTCCACACCCTTATAAAGAATGTTTCGTTCTCCTCCTCAACTGATGTGGGATCTCACAATCCACCCCCCTTTGGAGCCCAGCGTCCTCGCTGACACTCGTTCCCTTCTCCGATCGATGTAGGACCCTCCAATCCACCCCTCCCCCCTCTTTGGGACCCAGTGTTCTTACTGGCACACCGCTTCATGTCCACCCCCTTTGGGGCTTAGTCTCCTCGCTGGCACATCGCTCGATGTGTGACTTTGATACCATTTGTAACAGCTTAAGCCCACCGCTAGCATAATTGTCCTCTTTAGGCTCCCCCCCCCCCCCNTTCTCACCCTTGTAAAGAATGCTTCGTTCTCCTCCCCAACCGATGTGGGATCTCACACCCCCGTTCTCTGCCATGAGTTTATTTTTACTTATTGTCTTTCTATTTTCAAGTTTTTTCAGTATATAAAAGCGTACAGTTTCATTTCCGCACCAAAAAACTTAATTCATTCCTATCTAGAATTAAGGATGCAACTATACTCATGTCGAACCACAAAGTCTCTGAGCTACTTCACGAACCAGATTGAACTCAAAGACTCTCCTGCCTGTACTCCTTCCCTACTTTTGGCTCTATATTTTGTATCCAAAATCAAGCAGTGAGAAACAAGCTAAATTTCTTCAAGCAGGGCCCCCTTCTTAGCTCTTGGTGCCTGCTTTAGCCAATCGAAGCATATAGATCCGTAAATAGCTTTCTTGAGCTTGCATACCTAAGAGTTAGTTATAGGATTCCTAGGAGAAGATCAGCCTGTAGTTAGAGGAGGCTGAATAGAAAGAGATTCTTGCGGATCCCCGCTTCCCCTATGTTGTTGAAAGGCATTCTTCACGTCAAGTTGATTGAAATCAGGGCATTTTGATTGCAGCCAAGGCAAGAATGCCACGAATGGTGTTTTAGCGGGCAAATCTTTCCCCTATCTTTTCAGGGGGTCGACTCAAGGGAAGGAATCCTTTAGCTAGCTTTGTATCTCTGACGCGAGCCATATGCTTTATGCTTGATCTTGTAAATCTACTTGCAGCCAATGGCTTGTTTCCGGCAATAAGACTCAGTCTTCTTTTTTTCCTTCTTCCTGCATAGCATCTCTCCAGCAAGAATGATTTCAGGCTGAAGCAAATGATTCAGGTGAATGAGAAGATTGAACTGAGATGANGGGGCATCTTTCGCTTGACTTTTGGGTTGCGAGTGTATGCGTCCACCACGGTCAGGGCTTTCACAGGTACCTTGTACGTAGTGTCGGTTCAGCTAGCTTTGTTTGGTCTTGCTTGATTCTAGACTAGACTGGAAATAAATAACCCTATGACTGACCTAGCTCAAATTTGATGTTGATTCGGGCGGAGCGGGATAAAAGGTTTGGTTCAGGGGAGACAAATGAGATAGATGTTCGGAATGAATAAACTGGATATGCTGCTGAGGGAAATACTGCTTCGAGAGAGGGCGGTACAGAAAGAATTGAGTGATTCTCACCTAAGACTGAAAAGCGTTACGGTTGGGCTTCTTTAGAGGGAAGCAAGCGCGCCAAGCTAAGAACAAAACAATACATACCCATACACTTTTTCATCGACTTGTGGAAAAAAGGAGGATTTCAGCTACCTTCGGAAAGGGCAACTCAGTCTAAAGTGATATATATATATTCTTTTCTTTGTTTTGATTCCTCAGCTTCGGCGAAGATTGACTTACCTATTCAAAATGAATTGGGATTCTCATTGCCAGTGGATTTGGATTCAGAGGTAGCTCCAAACAAGCTCCTACTTCTTTCACTGTAAACTCCTTCCCCTCCCCTTAAGGTAAAGCTGCTTACCGTTTGTTGAAGAAAACTATCTATCCTCCTCACCTTCTTTCTTCACTCTCTACGTCTGTTTAGACAATATGATCTCATCCTCCACGAGAAAGCCTTTCCTTGCGAAAATTCTCCGTGAATATACACATACCAAGTCATGCTAGAATTTTGGGGTTGGGAGTTGTATTGGATAATTCCTGTGGATGGAAGTACAAAGTAATTCTTCTTTTAGTATTGTAAATTGTTTACTAAGTTTCTACCACTTCACAGATCAAAATGGCAAGCTCAAGTGAGAGTGAACGCAAGGAACCAGTGAACGAGCAAATGGTTGCAAACATGTATGGTACTTTAAGGTCTGAGCTCAATCAGATATACTCAAAAATCACAGAACTCGAGATGGAAGTCAGTGAACACTCTCTGGTCATTTCTGCAATTGAGCCACTTGATCCATCAAGACGATGCTACAGAATGATCGGGGGAGTGCTGGTGGAAAGAACTATCAAAGAGGTCCTGCCCGCTGTTCAACGCAACAAAGAGGGACTTGAGGAGGTGATTTCCAGACTCAACGAGGCATTGGAGAAGAAAAAGAAGGAAATTTCTGACTTGGAGGCCAAATACAAGATCAGGATTAGAAAGCCTGATGGTGAGGCTAAGGAGGAAGACAGTGGGCGTAAAGAGGGTGCAGCCCAAGGAGTCTTAGTAGGCCCTGCAAGTGAAAGTTAAAACTCCCAACCCCATTGGTGCATTTTAATCATATTCTTGTAGTGCTTAACTTTAATTTTCATGCGGATGATTCACTGTTTTTAAGCGCGTTTGTGTGAAATTTTGTTGATAACTTTCAGTTCAATAGGATGATTCCAGGACTTGTGTGGTATATAGATGATTTTGAGGGAGGAAATATTGAATGGGAACCGACTTTTCAGCGTTTAGATATCGAAAATTTCCCATTAGTTTGATCATATGCTGCAATGGATTCTGTACTTGAGCTTTCAGATTCAAGAGGAAATTACAAAGCAGTCTCTTCCTTATCCTCTCAGCTCAATATGATTTTCTTAAGGTTACAAATGAAGTAAAGAAAACCAAATAGTCATAATCGAAGCCTCCTTATCCTCTCAGCTAAAGAAATCCTGAACTCCTTTTCCGGCGAAAACTCGGTCGGACAGCTCCGCCAGTAACGCATTCACAGTGAGCAAAACGACACTAGAACCAGCAATAACCCCGATCACCACACCCGTCGTGCCCAAAACCTTTCGAAACGCCGGCCACTCAATCTTCTGAATCTCCTCCGCCACTCCGCCAATCAGGTCCCCCTCTTTCTCCACCTTCCGCTGCTTCAAAGCCTCCTGAATTTCGGCGCCCAAATTCTCGCCAGATTCTGCCGGTTGATCAGCCGTTTTCGACTCCTCCCTCGGCGGCCCAGCTTGAACCTCCACCCCATCAGATTCTGTGTTCTCTTGGCTTTCCTGCACGGCATTGACAGCGGAGAACATGCTATTCCTTCTAGACCTAATACCCGGGAGTCTGATCGTGCGATGTAAGTGAGGATGAGAATGATACGCGGAGCTCCGCCGTAGTGATACAAACAAGGAGGCCGCTCTGTTAGTTAAAGTGGAAGGTACCGTCGGAAATCGCAGGGAGATCGGAACGGCCATTTTCCGTATCGGTGAGCGGTCGAGAAATCAGATTGCACAAATGGATTAGCAATCAAGAATCAGATTTCGGGATAGCTAGGGCTTTGTTCGTGGCCCACATTATCTTACACGATGGTCGTGTACTATATGGGCCGAATATAGAAAAGGCCCAAACATTTTTAGTTGGGCCTAGTCCATGAGAATTCAAGATTACAGGTGGTTTAGTTTTAGGCAAGTGAAATTGAGATTAATTAAAGACTAATTAAGTTTTGTTAGTAGTTATGGTTATTAAATACCCTCTCAATCTACCT

mRNA sequence

ACCCTCGAGAAGTGACGCAACTCACCGTATGGCCCAATTTTCTTTAACTCGCTGTTCCTCCCCCCTTTCCATCTCGCTGTTTGCACTCTCGCAGCTAGCGCAGTTGTTCGAAGTCGTCGACTCCTCGAATCGCTCATCACTTGGCTTCACTATCAGCGCTGATTAGCGGCATCGATCAAATCAAAATGGCAAGCTCAAGTGAGAGTGAACGCAAGGAACCAGTGAACGAGCAAATGGTTGCAAACATGTATGGTACTTTAAGGTCTGAGCTCAATCAGATATACTCAAAAATCACAGAACTCGAGATGGAAGTCAGTGAACACTCTCTGGTCATTTCTGCAATTGAGCCACTTGATCCATCAAGACGATGCTACAGAATGATCGGGGGAGTGCTGGTGGAAAGAACTATCAAAGAGGTCCTGCCCGCTGTTCAACGCAACAAAGAGGGACTTGAGGAGGTGATTTCCAGACTCAACGAGGCATTGGAGAAGAAAAAGAAGGAAATTTCTGACTTGGAGGCCAAATACAAGATCAGGATTAGAAAGCCTGATGGTGAGGCTAAGGAGGAAGACAGTGGGCGTAAAGAGGGTGCAGCCCAAGGAGTCTTAGTAGGCCCTGCAAGTGAAAGTTAAAACTCCCAACCCCATTGGTGCATTTTAATCATATTCTTGTAGTGCTTAACTTTAATTTTCATGCGGATGATTCACTGTTTTTAAGCGCGTTTGTGTGAAATTTTGTTGATAACTTTCAGTTCAATAGGATGATTCCAGGACTTGTGTGGTATATAGATGATTTTGAGGGAGGAAATATTGAATGGGAACCGACTTTTCAGCGTTTAGATATCGAAAATTTCCCATTAGTTTGATCATATGCTGCAATGGATTCTGTACTTGAGCTTTCAGATTCAAGAGGAAATTACAAAGCAGTCTCTTCCTTATCCTCTCAGCTCAATATGATTTTCTTAAGGTTACAAATGAAGTAAAGAAAACCAAATAGTCATAATCGAAGCCTCCTTATCCTCTCAGCTAAAGAAATCCTGAACTCCTTTTCCGGCGAAAACTCGGTCGGACAGCTCCGCCAGTAACGCATTCACAGTGAGCAAAACGACACTAGAACCAGCAATAACCCCGATCACCACACCCGTCGTGCCCAAAACCTTTCGAAACGCCGGCCACTCAATCTTCTGAATCTCCTCCGCCACTCCGCCAATCAGGTCCCCCTCTTTCTCCACCTTCCGCTGCTTCAAAGCCTCCTGAATTTCGGCGCCCAAATTCTCGCCAGATTCTGCCGGTTGATCAGCCGTTTTCGACTCCTCCCTCGGCGGCCCAGCTTGAACCTCCACCCCATCAGATTCTGTGTTCTCTTGGCTTTCCTGCACGGCATTGACAGCGGAGAACATGCTATTCCTTCTAGACCTAATACCCGGGAGTCTGATCGTGCGATGTAAGTGAGGATGAGAATGATACGCGGAGCTCCGCCGTAGTGATACAAACAAGGAGGCCGCTCTGTTAGTTAAAGTGGAAGGTACCGTCGGAAATCGCAGGGAGATCGGAACGGCCATTTTCCGTATCGGTGAGCGGTCGAGAAATCAGATTGCACAAATGGATTAGCAATCAAGAATCAGATTTCGGGATAGCTAGGGCTTTGTTCGTGGCCCACATTATCTTACACGATGGTCGTGTACTATATGGGCCGAATATAGAAAAGGCCCAAACATTTTTAGTTGGGCCTAGTCCATGAGAATTCAAGATTACAGGTGGTTTAGTTTTAGGCAAGTGAAATTGAGATTAATTAAAGACTAATTAAGTTTTGTTAGTAGTTATGGTTATTAAATACCCTCTCAATCTACCT

Coding sequence (CDS)

ATGGCAAGCTCAAGTGAGAGTGAACGCAAGGAACCAGTGAACGAGCAAATGGTTGCAAACATGTATGGTACTTTAAGGTCTGAGCTCAATCAGATATACTCAAAAATCACAGAACTCGAGATGGAAGTCAGTGAACACTCTCTGGTCATTTCTGCAATTGAGCCACTTGATCCATCAAGACGATGCTACAGAATGATCGGGGGAGTGCTGGTGGAAAGAACTATCAAAGAGGTCCTGCCCGCTGTTCAACGCAACAAAGAGGGACTTGAGGAGGTGATTTCCAGACTCAACGAGGCATTGGAGAAGAAAAAGAAGGAAATTTCTGACTTGGAGGCCAAATACAAGATCAGGATTAGAAAGCCTGATGGTGAGGCTAAGGAGGAAGACAGTGGGCGTAAAGAGGGTGCAGCCCAAGGAGTCTTAGTAGGCCCTGCAAGTGAAAGTTAA

Protein sequence

MASSSESERKEPVNEQMVANMYGTLRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSRRCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRKPDGEAKEEDSGRKEGAAQGVLVGPASES
Homology
[Close]
BLAST of Cp4.1LG03g10740 vs. Swiss-Prot
Match: PFD2_ARATH (Probable prefoldin subunit 2 OS=Arabidopsis thaliana GN=At3g22480 PE=2 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 7.9e-44
Identity = 103/149 (69.13%), Postives = 120/149 (80.54%), Query Frame = 1 

Query: 1   MASSSESER-KEPVNEQMVANMYGTLRSELNQIYSKITELEMEVSEHSLVISAIEPLDPS 60
           MAS S S   +EP NEQ V NMY   RSEL+QIYS IT+LEM+VSEHSLVI+AI+PLD S
Sbjct: 1   MASKSGSGGLREPPNEQAVLNMYEGKRSELSQIYSNITDLEMQVSEHSLVINAIQPLDQS 60

Query: 61  RRCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIR 120
           R+C+RMIGGVLVERTIKEVLPAVQRNK+GLEEV+ +L E LEKKKK++++ EAKYKIRI 
Sbjct: 61  RKCFRMIGGVLVERTIKEVLPAVQRNKDGLEEVVRKLYETLEKKKKDLTEFEAKYKIRIT 120

Query: 121 KPDGEAKEEDSGRKEGAAQGVLVGPASES 149
           K   E  +E   +KEG AQGVLVG AS S
Sbjct: 121 KQ--EDNKEGGNKKEGNAQGVLVGAASSS 147

[Close]
BLAST of Cp4.1LG03g10740 vs. Swiss-Prot
Match: PFD2_BOVIN (Prefoldin subunit 2 OS=Bos taurus GN=PFDN2 PE=2 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 7.7e-23
Identity = 63/144 (43.75%), Postives = 92/144 (63.89%), Query Frame = 1 

Query: 3   SSSESERKEPVNEQMVANMYGTLRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSRRC 62
           SS     K  V+ + V   +  LR E   + SK  ELEME++EHSLVI  ++ +D +R+C
Sbjct: 11  SSGSGTGKGAVSAEQVIAGFNRLRQEQRGLASKAAELEMELNEHSLVIDTLKEVDETRKC 70

Query: 63  YRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRI---- 122
           YRM+GGVLVERT+KEVLPA++ NKE ++++I  L + L+ K KE+++   K+ IR+    
Sbjct: 71  YRMVGGVLVERTVKEVLPALENNKEQIQKIIETLTQQLQAKGKELNEFREKHNIRLMGED 130

Query: 123 RKPDGEAKEEDSGRKEGAAQGVLV 143
            KP  +   E +G K  +A GVLV
Sbjct: 131 EKPAAKENSEGAGAKASSA-GVLV 153

[Close]
BLAST of Cp4.1LG03g10740 vs. Swiss-Prot
Match: PFD2_HUMAN (Prefoldin subunit 2 OS=Homo sapiens GN=PFDN2 PE=1 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 7.7e-23
Identity = 63/144 (43.75%), Postives = 92/144 (63.89%), Query Frame = 1 

Query: 3   SSSESERKEPVNEQMVANMYGTLRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSRRC 62
           SS     K  V+ + V   +  LR E   + SK  ELEME++EHSLVI  ++ +D +R+C
Sbjct: 11  SSGSGAGKGAVSAEQVIAGFNRLRQEQRGLASKAAELEMELNEHSLVIDTLKEVDETRKC 70

Query: 63  YRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRI---- 122
           YRM+GGVLVERT+KEVLPA++ NKE ++++I  L + L+ K KE+++   K+ IR+    
Sbjct: 71  YRMVGGVLVERTVKEVLPALENNKEQIQKIIETLTQQLQAKGKELNEFREKHNIRLMGED 130

Query: 123 RKPDGEAKEEDSGRKEGAAQGVLV 143
            KP  +   E +G K  +A GVLV
Sbjct: 131 EKPAAKENSEGAGAKASSA-GVLV 153

[Close]
BLAST of Cp4.1LG03g10740 vs. Swiss-Prot
Match: PFD2_DICDI (Probable prefoldin subunit 2 OS=Dictyostelium discoideum GN=pfdn2 PE=3 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 1.0e-22
Identity = 52/112 (46.43%), Postives = 84/112 (75.00%), Query Frame = 1 

Query: 7   SERKEPVNEQMVANMYGTLRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSRRCYRMI 66
           S++K+ + E  +   Y  L+S+  QI S+I+E E +V E+ LVI+AI+ L+ +R+C+RM+
Sbjct: 2   SQQKQQLTENQIIEHYKDLKSQQQQIISRISEFESDVGEYGLVINAIQNLESNRKCFRMV 61

Query: 67  GGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRI 119
           GGVLVERT+ EVLP +++N++G++EV+ +L+E L  K KE++D  A YKI+I
Sbjct: 62  GGVLVERTVGEVLPQIKQNRDGIKEVVKKLDENLSIKTKELNDFVALYKIKI 113

[Close]
BLAST of Cp4.1LG03g10740 vs. Swiss-Prot
Match: PFD2_RAT (Prefoldin subunit 2 OS=Rattus norvegicus GN=Pfdn2 PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 2.2e-22
Identity = 62/144 (43.06%), Postives = 92/144 (63.89%), Query Frame = 1 

Query: 3   SSSESERKEPVNEQMVANMYGTLRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSRRC 62
           S      K  V+ + V   +  LR E   + SK  ELEME++EHSLVI  ++ +D +R+C
Sbjct: 11  SGGSGTGKGAVSAEQVIAGFNRLRQEQRGLASKAAELEMELNEHSLVIDTLKEVDETRKC 70

Query: 63  YRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRI---- 122
           YRM+GGVLVERT+KEVLPA++ NKE ++++I  L++ L+ K KE+++   K+ IR+    
Sbjct: 71  YRMVGGVLVERTVKEVLPALEGNKEQIQKIIETLSQQLQAKGKELNEFREKHNIRLMGED 130

Query: 123 RKPDGEAKEEDSGRKEGAAQGVLV 143
            KP  +   E +G K  +A GVLV
Sbjct: 131 EKPAAKENSEGAGAKSSSA-GVLV 153

[Close]
BLAST of Cp4.1LG03g10740 vs. TrEMBL
Match: A0A0A0KVR4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G638310 PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 4.9e-69
Identity = 145/148 (97.97%), Postives = 145/148 (97.97%), Query Frame = 1 

Query: 1   MASSSESERKEPVNEQMVANMYGTLRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSR 60
           MASSSESERKEPVNEQMVANMYG LRSELNQIYSKITELEME SEHSLVISAIEPLDPSR
Sbjct: 1   MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSR 60

Query: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK 120
           RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK
Sbjct: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK 120

Query: 121 PDGEAKEEDSGRKEGAAQGVLVGPASES 149
           PDGEAKEEDSGRKEGAAQGVLVGPA ES
Sbjct: 121 PDGEAKEEDSGRKEGAAQGVLVGPAGES 148

[Close]
BLAST of Cp4.1LG03g10740 vs. TrEMBL
Match: A0A067L7X9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02177 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 2.2e-56
Identity = 120/148 (81.08%), Postives = 134/148 (90.54%), Query Frame = 1 

Query: 1   MASSSESERKEPVNEQMVANMYGTLRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSR 60
           MAS +E +RKEP+NEQ + N Y  LRSELNQIYSKITELEMEVSEHSLVI+AIEPLDPSR
Sbjct: 1   MASKAEGDRKEPINEQAIVNAYTALRSELNQIYSKITELEMEVSEHSLVINAIEPLDPSR 60

Query: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK 120
           RCYRMIGGVLVERTIKEVLPAVQRNKEG+EEVI+RLNEALEKKKKEI + E+KYKIRIRK
Sbjct: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGIEEVITRLNEALEKKKKEIVEFESKYKIRIRK 120

Query: 121 PDGEAKEEDSGRKEGAAQGVLVGPASES 149
           P+ E K +D G+KEG++QGVLVGPAS S
Sbjct: 121 PENEVK-DDGGKKEGSSQGVLVGPASSS 147

[Close]
BLAST of Cp4.1LG03g10740 vs. TrEMBL
Match: A0A059B3M3_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H03463 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 3.7e-56
Identity = 120/136 (88.24%), Postives = 129/136 (94.85%), Query Frame = 1 

Query: 11  EPVNEQMVANMYGTLRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSRRCYRMIGGVL 70
           EPVNEQ VA +YG+LR+ELNQIYSKITELEMEVSEHSLV+SAI+PLDPSRRCYRMIGGVL
Sbjct: 8   EPVNEQAVATIYGSLRNELNQIYSKITELEMEVSEHSLVVSAIQPLDPSRRCYRMIGGVL 67

Query: 71  VERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRKPDGEAKEEDS 130
           VERTIKEVLPAVQRNKEGLEEVI RLNEALEKKKKEI+DLEAKYKIRIRK DGE K +D 
Sbjct: 68  VERTIKEVLPAVQRNKEGLEEVIGRLNEALEKKKKEIADLEAKYKIRIRKSDGEVK-DDG 127

Query: 131 GRKEGAAQGVLVGPAS 147
           GRKEG++QGVLVGPAS
Sbjct: 128 GRKEGSSQGVLVGPAS 142

[Close]
BLAST of Cp4.1LG03g10740 vs. TrEMBL
Match: F6HDQ6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g03500 PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 6.3e-56
Identity = 121/146 (82.88%), Postives = 133/146 (91.10%), Query Frame = 1 

Query: 1   MASSSESERKEPVNEQMVANMYGTLRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSR 60
           MA  +  + KEPVNEQ VAN+YG +R+ELNQIYSKITELEMEVSEHSLVI AI+PLDPSR
Sbjct: 132 MAGKAGGDLKEPVNEQAVANIYGAMRAELNQIYSKITELEMEVSEHSLVIGAIQPLDPSR 191

Query: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK 120
           RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEI++ EAKYKIRIRK
Sbjct: 192 RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEIAEFEAKYKIRIRK 251

Query: 121 PDGEAKEEDSGRKEGAAQGVLVGPAS 147
            DGE K+E+  +KEG+AQGVLVGPAS
Sbjct: 252 SDGEVKDENE-KKEGSAQGVLVGPAS 276

[Close]
BLAST of Cp4.1LG03g10740 vs. TrEMBL
Match: A0A061FUB2_THECC (Prefoldin 2 isoform 2 (Fragment) OS=Theobroma cacao GN=TCM_042978 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 1.1e-55
Identity = 121/145 (83.45%), Postives = 134/145 (92.41%), Query Frame = 1 

Query: 4   SSESERKEPVNEQMVANMYGTLRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSRRCY 63
           +S+SE KEPVNEQ+VAN YG +RSELNQIYSKITELEMEVSEHSLVI+AI+PLD SRRCY
Sbjct: 53  ASKSESKEPVNEQIVANTYGAMRSELNQIYSKITELEMEVSEHSLVINAIQPLDQSRRCY 112

Query: 64  RMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRKPDG 123
           RMIGGVLVERTIKEVLPAVQRNKEGLEEVI+RLNEALEKKKKEI+D EAKYKIRI+K D 
Sbjct: 113 RMIGGVLVERTIKEVLPAVQRNKEGLEEVITRLNEALEKKKKEIADFEAKYKIRIKKSDS 172

Query: 124 EAKEEDSGRKEGAAQGVLVGPASES 149
           + K+E S +KEG+AQGVLVGPAS S
Sbjct: 173 DVKDE-SSKKEGSAQGVLVGPASSS 196

[Close]
BLAST of Cp4.1LG03g10740 vs. TAIR10
Match: AT3G22480.2 (AT3G22480.2 prefoldin 2)

HSP 1 Score: 177.9 bits (450), Expect = 4.4e-45
Identity = 103/149 (69.13%), Postives = 120/149 (80.54%), Query Frame = 1 

Query: 1   MASSSESER-KEPVNEQMVANMYGTLRSELNQIYSKITELEMEVSEHSLVISAIEPLDPS 60
           MAS S S   +EP NEQ V NMY   RSEL+QIYS IT+LEM+VSEHSLVI+AI+PLD S
Sbjct: 1   MASKSGSGGLREPPNEQAVLNMYEGKRSELSQIYSNITDLEMQVSEHSLVINAIQPLDQS 60

Query: 61  RRCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIR 120
           R+C+RMIGGVLVERTIKEVLPAVQRNK+GLEEV+ +L E LEKKKK++++ EAKYKIRI 
Sbjct: 61  RKCFRMIGGVLVERTIKEVLPAVQRNKDGLEEVVRKLYETLEKKKKDLTEFEAKYKIRIT 120

Query: 121 KPDGEAKEEDSGRKEGAAQGVLVGPASES 149
           K   E  +E   +KEG AQGVLVG AS S
Sbjct: 121 KQ--EDNKEGGNKKEGNAQGVLVGAASSS 147

[Close]
BLAST of Cp4.1LG03g10740 vs. NCBI nr
Match: gi|449447400|ref|XP_004141456.1| (PREDICTED: probable prefoldin subunit 2 [Cucumis sativus])

HSP 1 Score: 268.5 bits (685), Expect = 7.1e-69
Identity = 145/148 (97.97%), Postives = 145/148 (97.97%), Query Frame = 1 

Query: 1   MASSSESERKEPVNEQMVANMYGTLRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSR 60
           MASSSESERKEPVNEQMVANMYG LRSELNQIYSKITELEME SEHSLVISAIEPLDPSR
Sbjct: 1   MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSR 60

Query: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK 120
           RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK
Sbjct: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK 120

Query: 121 PDGEAKEEDSGRKEGAAQGVLVGPASES 149
           PDGEAKEEDSGRKEGAAQGVLVGPA ES
Sbjct: 121 PDGEAKEEDSGRKEGAAQGVLVGPAGES 148

[Close]
BLAST of Cp4.1LG03g10740 vs. NCBI nr
Match: gi|659118879|ref|XP_008459357.1| (PREDICTED: probable prefoldin subunit 2 [Cucumis melo])

HSP 1 Score: 264.6 bits (675), Expect = 1.0e-67
Identity = 144/148 (97.30%), Postives = 145/148 (97.97%), Query Frame = 1 

Query: 1   MASSSESERKEPVNEQMVANMYGTLRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSR 60
           MASSSESERKEPVNEQMVANMYG LRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSR
Sbjct: 1   MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSR 60

Query: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK 120
           RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRL+EALEKKKKEISDLEAKYKIRIRK
Sbjct: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLHEALEKKKKEISDLEAKYKIRIRK 120

Query: 121 PDGEAKEEDSGRKEGAAQGVLVGPASES 149
            DGEAKEEDSGRKEGAAQGVLVGPA ES
Sbjct: 121 HDGEAKEEDSGRKEGAAQGVLVGPAGES 148

[Close]
BLAST of Cp4.1LG03g10740 vs. NCBI nr
Match: gi|1009141392|ref|XP_015888170.1| (PREDICTED: probable prefoldin subunit 2 [Ziziphus jujuba])

HSP 1 Score: 229.2 bits (583), Expect = 4.8e-57
Identity = 123/148 (83.11%), Postives = 135/148 (91.22%), Query Frame = 1 

Query: 1   MASSSESERKEPVNEQMVANMYGTLRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSR 60
           MA  +E + KEPVNEQ++ANMYG +RSELNQIYSKITELEMEVSEHSLVI+AI+PLD SR
Sbjct: 1   MAGRAEGDHKEPVNEQVIANMYGNMRSELNQIYSKITELEMEVSEHSLVINAIQPLDQSR 60

Query: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK 120
           RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEI++ EAKYKIRI+K
Sbjct: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEIAEFEAKYKIRIKK 120

Query: 121 PDGEAKEEDSGRKEGAAQGVLVGPASES 149
           PD   K +DSGRKEG+AQGVLVGPA  S
Sbjct: 121 PDSVVK-DDSGRKEGSAQGVLVGPAGGS 147

[Close]
BLAST of Cp4.1LG03g10740 vs. NCBI nr
Match: gi|719963035|ref|XP_010248483.1| (PREDICTED: probable prefoldin subunit 2 [Nelumbo nucifera])

HSP 1 Score: 227.3 bits (578), Expect = 1.8e-56
Identity = 119/146 (81.51%), Postives = 134/146 (91.78%), Query Frame = 1 

Query: 1   MASSSESERKEPVNEQMVANMYGTLRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSR 60
           M S +E   KEP+NEQ VANMY T+RSE+NQ+YSKITELEMEVSEHSLVI AI+PLDPSR
Sbjct: 1   MTSKAEGASKEPINEQAVANMYATMRSEINQLYSKITELEMEVSEHSLVIGAIQPLDPSR 60

Query: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK 120
           RCYRMIGGVLVERTIK+VLPAVQRNKEGLEEVISR+NEALEKKKKEI++ EAKYKIRIRK
Sbjct: 61  RCYRMIGGVLVERTIKDVLPAVQRNKEGLEEVISRMNEALEKKKKEIAEFEAKYKIRIRK 120

Query: 121 PDGEAKEEDSGRKEGAAQGVLVGPAS 147
           PD E K++D+ RKEG++QGVLVGPAS
Sbjct: 121 PDNEVKDDDN-RKEGSSQGVLVGPAS 145

[Close]
BLAST of Cp4.1LG03g10740 vs. NCBI nr
Match: gi|802581292|ref|XP_012069635.1| (PREDICTED: probable prefoldin subunit 2 [Jatropha curcas])

HSP 1 Score: 226.5 bits (576), Expect = 3.1e-56
Identity = 120/148 (81.08%), Postives = 134/148 (90.54%), Query Frame = 1 

Query: 1   MASSSESERKEPVNEQMVANMYGTLRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSR 60
           MAS +E +RKEP+NEQ + N Y  LRSELNQIYSKITELEMEVSEHSLVI+AIEPLDPSR
Sbjct: 1   MASKAEGDRKEPINEQAIVNAYTALRSELNQIYSKITELEMEVSEHSLVINAIEPLDPSR 60

Query: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK 120
           RCYRMIGGVLVERTIKEVLPAVQRNKEG+EEVI+RLNEALEKKKKEI + E+KYKIRIRK
Sbjct: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGIEEVITRLNEALEKKKKEIVEFESKYKIRIRK 120

Query: 121 PDGEAKEEDSGRKEGAAQGVLVGPASES 149
           P+ E K +D G+KEG++QGVLVGPAS S
Sbjct: 121 PENEVK-DDGGKKEGSSQGVLVGPASSS 147

The following BLAST results are available for this feature:
BLAST of Cp4.1LG03g10740 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PFD2_ARATH7.9e-4469.13Probable prefoldin subunit 2 OS=Arabidopsis thaliana GN=At3g22480 PE=2 SV=1[more]
PFD2_BOVIN7.7e-2343.75Prefoldin subunit 2 OS=Bos taurus GN=PFDN2 PE=2 SV=1[more]
PFD2_HUMAN7.7e-2343.75Prefoldin subunit 2 OS=Homo sapiens GN=PFDN2 PE=1 SV=1[more]
PFD2_DICDI1.0e-2246.43Probable prefoldin subunit 2 OS=Dictyostelium discoideum GN=pfdn2 PE=3 SV=1[more]
PFD2_RAT2.2e-2243.06Prefoldin subunit 2 OS=Rattus norvegicus GN=Pfdn2 PE=2 SV=1[more]
BLAST of Cp4.1LG03g10740 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KVR4_CUCSA4.9e-6997.97Uncharacterized protein OS=Cucumis sativus GN=Csa_5G638310 PE=4 SV=1[more]
A0A067L7X9_JATCU2.2e-5681.08Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02177 PE=4 SV=1[more]
A0A059B3M3_EUCGR3.7e-5688.24Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H03463 PE=4 SV=1[more]
F6HDQ6_VITVI6.3e-5682.88Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g03500 PE=4 SV=... [more]
A0A061FUB2_THECC1.1e-5583.45Prefoldin 2 isoform 2 (Fragment) OS=Theobroma cacao GN=TCM_042978 PE=4 SV=1[more]
BLAST of Cp4.1LG03g10740 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G22480.24.4e-4569.13 prefoldin 2[more]
BLAST of Cp4.1LG03g10740 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449447400|ref|XP_004141456.1|7.1e-6997.97PREDICTED: probable prefoldin subunit 2 [Cucumis sativus][more]
gi|659118879|ref|XP_008459357.1|1.0e-6797.30PREDICTED: probable prefoldin subunit 2 [Cucumis melo][more]
gi|1009141392|ref|XP_015888170.1|4.8e-5783.11PREDICTED: probable prefoldin subunit 2 [Ziziphus jujuba][more]
gi|719963035|ref|XP_010248483.1|1.8e-5681.51PREDICTED: probable prefoldin subunit 2 [Nelumbo nucifera][more]
gi|802581292|ref|XP_012069635.1|3.1e-5681.08PREDICTED: probable prefoldin subunit 2 [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0051082unfolded protein binding
Vocabulary: Cellular Component
TermDefinition
GO:0016272prefoldin complex
Vocabulary: Biological Process
TermDefinition
GO:0006457protein folding
Vocabulary: INTERPRO
TermDefinition
IPR027235PFD2
IPR009053Prefoldin
IPR002777PFD_beta-like
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006457 protein folding
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
cellular_component GO:0016272 prefoldin complex
cellular_component GO:0005840 ribosome
molecular_function GO:0051082 unfolded protein binding
molecular_function GO:0003735 structural constituent of ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG03g10740.1Cp4.1LG03g10740.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002777Prefoldin beta-likePFAMPF01920Prefoldin_2coord: 16..118
score: 6.7
IPR009053PrefoldinGENE3DG3DSA:1.10.287.370coord: 17..114
score: 1.4
IPR009053PrefoldinunknownSSF46579Prefoldincoord: 19..117
score: 4.58
IPR027235Prefoldin subunit 2PANTHERPTHR13303PREFOLDIN SUBUNIT 2coord: 2..148
score: 6.0
NoneNo IPR availableunknownCoilCoilcoord: 79..120
scor

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG03g10740CmaCh14G017060Cucurbita maxima (Rimu)cmacpeB283
Cp4.1LG03g10740CmaCh06G014120Cucurbita maxima (Rimu)cmacpeB837
Cp4.1LG03g10740CmoCh14G017490Cucurbita moschata (Rifu)cmocpeB245
Cp4.1LG03g10740CmoCh06G014140Cucurbita moschata (Rifu)cmocpeB787
Cp4.1LG03g10740Cla021627Watermelon (97103) v1cpewmB613
Cp4.1LG03g10740ClCG05G005160Watermelon (Charleston Gray)cpewcgB559
Cp4.1LG03g10740Lsi05G016030Bottle gourd (USVL1VR-Ls)cpelsiB506
Cp4.1LG03g10740Bhi01G000586Wax gourdcpewgoB0783
Cp4.1LG03g10740Carg17418Silver-seed gourdcarcpeB0860
Cp4.1LG03g10740Carg23522Silver-seed gourdcarcpeB1183
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG03g10740Cp4.1LG08g04180Cucurbita pepo (Zucchini)cpecpeB482
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG03g10740Cucumber (Chinese Long) v3cpecucB0759
Cp4.1LG03g10740Cucumber (Chinese Long) v3cpecucB0791
Cp4.1LG03g10740Cucumber (Chinese Long) v3cpecucB0795
Cp4.1LG03g10740Wax gourdcpewgoB0800
Cp4.1LG03g10740Cucurbita pepo (Zucchini)cpecpeB183
Cp4.1LG03g10740Cucurbita pepo (Zucchini)cpecpeB184
Cp4.1LG03g10740Cucurbita pepo (Zucchini)cpecpeB333
Cp4.1LG03g10740Cucumber (Gy14) v1cgycpeB0682
Cp4.1LG03g10740Cucurbita maxima (Rimu)cmacpeB401
Cp4.1LG03g10740Cucurbita maxima (Rimu)cmacpeB536
Cp4.1LG03g10740Cucurbita maxima (Rimu)cmacpeB928
Cp4.1LG03g10740Cucurbita moschata (Rifu)cmocpeB363
Cp4.1LG03g10740Cucurbita moschata (Rifu)cmocpeB862
Cp4.1LG03g10740Wild cucumber (PI 183967)cpecpiB611
Cp4.1LG03g10740Cucumber (Chinese Long) v2cpecuB609
Cp4.1LG03g10740Bottle gourd (USVL1VR-Ls)cpelsiB498
Cp4.1LG03g10740Bottle gourd (USVL1VR-Ls)cpelsiB484
Cp4.1LG03g10740Bottle gourd (USVL1VR-Ls)cpelsiB510
Cp4.1LG03g10740Watermelon (Charleston Gray)cpewcgB539
Cp4.1LG03g10740Watermelon (97103) v1cpewmB590
Cp4.1LG03g10740Watermelon (97103) v1cpewmB605
Cp4.1LG03g10740Melon (DHL92) v3.5.1cpemeB585
Cp4.1LG03g10740Cucumber (Gy14) v2cgybcpeB406
Cp4.1LG03g10740Cucumber (Gy14) v2cgybcpeB959
Cp4.1LG03g10740Melon (DHL92) v3.6.1cpemedB666
Cp4.1LG03g10740Melon (DHL92) v3.6.1cpemedB693
Cp4.1LG03g10740Silver-seed gourdcarcpeB0106
Cp4.1LG03g10740Silver-seed gourdcarcpeB0454
Cp4.1LG03g10740Silver-seed gourdcarcpeB1061