Cp4.1LG08g02660 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG08g02660
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionChaperone protein DNAj, putative
LocationCp4.1LG08 : 2655583 .. 2657410 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAGACGGAGAAACAACAGAGAAATGCAGTGCTCCGATTTTACCTACTCTGGAGGCGATTACCGCATCTTAATCCCTTCGAGCCCTAGTATTACCGGCCGGCGGAAAATTTCCGGCCAGCGATCTCGGGTTTTCTTCCCCAACACTCCGCCGTGCAATTCGAGTCGCTTGCCGTCTCTTTCTATTAGAGCAAAGGCCTCGTTCAACGGAGGAATCGCCTCTTCCGAGGCCGCCGATGGATCCTTCTACGATTTGCTAGGCATTTCCGAGTCTGGATCCTTGGCGGAAATTAAGCGCGCCTACAAGCAACTAGCTCGGAAGTACCATCCGGATGTGTCGCCGCCGGGCCGGGCAGAGGAGTATACGAAGAGGTTCATTCGTGTTCAGGAGGCGTACGAGACGTTGTCGGATCCGAGGAGGAGAGCGTTGTATGACAGAGATATGGTTGGAGGCCTTCAAGTCGCGTTCTCTGCTAGGAGACGATTCGATGTCGATGAGGTATTGGTTCAATTTATCTATCGATTCTCGTTTGTATTTCAGTATTTTAGGGGAAATTGCGTTTGATTGTTGGTGGATTTTGAAATCTTCTGTGTTGATTTTGTGTTTGCCCTTGTTTTTGAGGTGTTTCATGTTTAATTGGTATGAGTGAAGGATATTTTCTTGTTAGATGCTCCTTTGGTTCTGGATTTTTGGTGTGAGGAAAGGAATCGTCCGCTTCTGGTTCTTTGTTTCTTTCTTTGGTAGTTTTCTGACTCTATCCGATAAAAGCTGCTGAAGGAATGGTGGAGGGCGGTACCGTTCCTATTGGAGCAAGGGTATTCAATTGGCTATTCAATTCTTTGTTATTCTTTGTTCTGTAATTAAGACTAAGAGATCGATTGCAATTGGCTAATCTACTGTTTTCTCGACAACTTTCTCCAAATATGGAATTTCTTTCCTACTTCATTTGATTGTGTTTCTAGAAAGTCTGAAATTACTTTGTCAACGTCTCCCATAAATCTTTCCCCGCTGTATCAAACAAAAACTTGAGTTAATCGCACCTGGGACCTGCCATTTTTGATCTTCCATTTGAATGCCATAACTCAATCTTTCAATTTGACTTGAATCCAGGGAGTTCCGGATAAAAGTGCATGGAAGAGTTGTTGGAAAGCTCAGATCTCAGAATTGAAGAGAAGAAGCATGGATAAGGATTCGAAACACAATTTGTCGTGGGGAGATCGAATGCGCCAACAAATGAATGAACAGGTTTGATTGAAATTATAGATTCATACTTGAGCAGCCATAAGTAAATAGAACGACCCATTTGAGAATCATAATAAATTTGTTTTTAGTTTTCCTCATACTTCCACTTCTTCCCCTTTCCTGTTTATAATCTGCTCTAAAACGATTGATTGAAAACTTGCCCCACAAGGCCATAAATAATCTGCACCATCACTGTATCTTGTGAATACAAAATTTCCCAATATCCTCTTTGACCTATATTATTGTCTCGACTGTAACAGAATCAGCCCACTTTCTATATAAGGCTCTTTATCATCCCTTTCTTTCAAACTCCTGAAATTAGGTCTTCAAATTGAATTTGAAATCGTTTCTCAGATTGGTTTCAAATTTAGGAGGAGGTCAGTTATAGTTCACAATCCTACCAAATCTGACCTTTTTTAGATTGATTTTTCTAGATGACCAGCTAGAGTTGATAATAAAATGAACAAGAAGGGAAAAGAAAGTTGGGAAGGAGGAGGGAGTGCAGGATGGATTTACATGTTATTATCTTTTTAAGATTATTTATAGATATATGATAAATATTCTAGAAAAAATAGGAGTAAATAAGAT

mRNA sequence

GAGACGGAGAAACAACAGAGAAATGCAGTGCTCCGATTTTACCTACTCTGGAGGCGATTACCGCATCTTAATCCCTTCGAGCCCTAGTATTACCGGCCGGCGGAAAATTTCCGGCCAGCGATCTCGGGTTTTCTTCCCCAACACTCCGCCGTGCAATTCGAGTCGCTTGCCGTCTCTTTCTATTAGAGCAAAGGCCTCGTTCAACGGAGGAATCGCCTCTTCCGAGGCCGCCGATGGATCCTTCTACGATTTGCTAGGCATTTCCGAGTCTGGATCCTTGGCGGAAATTAAGCGCGCCTACAAGCAACTAGCTCGGAAGTACCATCCGGATGTGTCGCCGCCGGGCCGGGCAGAGGAGTATACGAAGAGGTTCATTCGTGTTCAGGAGGCGTACGAGACGTTGTCGGATCCGAGGAGGAGAGCGTTGTATGACAGAGATATGGTTGGAGGCCTTCAAGTCGCGTTCTCTGCTAGGAGACGATTCGATGTCGATGAGGGAGTTCCGGATAAAAGTGCATGGAAGAGTTGTTGGAAAGCTCAGATCTCAGAATTGAAGAGAAGAAGCATGGATAAGGATTCGAAACACAATTTGTCGTGGGGAGATCGAATGCGCCAACAAATGAATGAACAGGTTTGATTGAAATTATAGATTCATACTTGAGCAGCCATAAGTAAATAGAACGACCCATTTGAGAATCATAATAAATTTGTTTTTAGTTTTCCTCATACTTCCACTTCTTCCCCTTTCCTGTTTATAATCTGCTCTAAAACGATTGATTGAAAACTTGCCCCACAAGGCCATAAATAATCTGCACCATCACTGTATCTTGTGAATACAAAATTTCCCAATATCCTCTTTGACCTATATTATTGTCTCGACTGTAACAGAATCAGCCCACTTTCTATATAAGGCTCTTTATCATCCCTTTCTTTCAAACTCCTGAAATTAGGTCTTCAAATTGAATTTGAAATCGTTTCTCAGATTGGTTTCAAATTTAGGAGGAGGTCAGTTATAGTTCACAATCCTACCAAATCTGACCTTTTTTAGATTGATTTTTCTAGATGACCAGCTAGAGTTGATAATAAAATGAACAAGAAGGGAAAAGAAAGTTGGGAAGGAGGAGGGAGTGCAGGATGGATTTACATGTTATTATCTTTTTAAGATTATTTATAGATATATGATAAATATTCTAGAAAAAATAGGAGTAAATAAGAT

Coding sequence (CDS)

ATGCAGTGCTCCGATTTTACCTACTCTGGAGGCGATTACCGCATCTTAATCCCTTCGAGCCCTAGTATTACCGGCCGGCGGAAAATTTCCGGCCAGCGATCTCGGGTTTTCTTCCCCAACACTCCGCCGTGCAATTCGAGTCGCTTGCCGTCTCTTTCTATTAGAGCAAAGGCCTCGTTCAACGGAGGAATCGCCTCTTCCGAGGCCGCCGATGGATCCTTCTACGATTTGCTAGGCATTTCCGAGTCTGGATCCTTGGCGGAAATTAAGCGCGCCTACAAGCAACTAGCTCGGAAGTACCATCCGGATGTGTCGCCGCCGGGCCGGGCAGAGGAGTATACGAAGAGGTTCATTCGTGTTCAGGAGGCGTACGAGACGTTGTCGGATCCGAGGAGGAGAGCGTTGTATGACAGAGATATGGTTGGAGGCCTTCAAGTCGCGTTCTCTGCTAGGAGACGATTCGATGTCGATGAGGGAGTTCCGGATAAAAGTGCATGGAAGAGTTGTTGGAAAGCTCAGATCTCAGAATTGAAGAGAAGAAGCATGGATAAGGATTCGAAACACAATTTGTCGTGGGGAGATCGAATGCGCCAACAAATGAATGAACAGGTTTGA

Protein sequence

MQCSDFTYSGGDYRILIPSSPSITGRRKISGQRSRVFFPNTPPCNSSRLPSLSIRAKASFNGGIASSEAADGSFYDLLGISESGSLAEIKRAYKQLARKYHPDVSPPGRAEEYTKRFIRVQEAYETLSDPRRRALYDRDMVGGLQVAFSARRRFDVDEGVPDKSAWKSCWKAQISELKRRSMDKDSKHNLSWGDRMRQQMNEQV
Homology
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BLAST of Cp4.1LG08g02660 vs. Swiss-Prot
Match: DNJ20_ARATH (Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis thaliana GN=ATJ20 PE=1 SV=2)

HSP 1 Score: 166.8 bits (421), Expect = 2.5e-40
Identity = 92/158 (58.23%), Postives = 115/158 (72.78%), Query Frame = 1 

Query: 47  SRLPSLSIRAKASFNGGIASSEAADGSFYDLLGISESGSLAEIKRAYKQLARKYHPDVSP 106
           +R  S  I+++ + +  +  SE  D SFYDLLG++ES +L EIK+AYKQLARKYHPDVSP
Sbjct: 42  TRFSSTRIQSRLTHDDPVKQSE--DLSFYDLLGVTESVTLPEIKQAYKQLARKYHPDVSP 101

Query: 107 PGRAEEYTKRFIRVQEAYETLSDPRRRALYDRDMVGGLQVAFSARR--RFDVDEGVPDKS 166
           P R EEYT RFIRVQEAYETLSDPRRR LYDRD+  G   +FS RR  R+D  E V +KS
Sbjct: 102 PDRVEEYTDRFIRVQEAYETLSDPRRRVLYDRDLSMGFSFSFSGRRQNRYD-QEVVEEKS 161

Query: 167 AWKSCWKAQISELKRRSMDKDSKHNLSWGDRMRQQMNE 203
            WK+ W+ Q+S L+RRS  KD+ + +SW  RMR+Q  E
Sbjct: 162 EWKAKWQTQLSGLRRRSNQKDN-NTMSWAARMRRQQQE 195

[Close]
BLAST of Cp4.1LG08g02660 vs. Swiss-Prot
Match: DNAJ_LACRD (Chaperone protein DnaJ OS=Lactobacillus reuteri (strain DSM 20016) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.7e-12
Identity = 39/78 (50.00%), Postives = 54/78 (69.23%), Query Frame = 1 

Query: 70  ADGSFYDLLGISESGSLAEIKRAYKQLARKYHPDVSPPGRAEEYTKRFIRVQEAYETLSD 129
           A+  +YD+LG+S+  S  +IKRAY++LA KYHPDV+    AEE   +F ++ EAYETLSD
Sbjct: 2   AEQDYYDILGVSKDASEKDIKRAYRRLAAKYHPDVNHEPGAEE---KFKKINEAYETLSD 61

Query: 130 PRRRALYDRDMVGGLQVA 148
            ++RA YD+    G Q A
Sbjct: 62  SQKRAQYDQFGSAGPQGA 76

[Close]
BLAST of Cp4.1LG08g02660 vs. Swiss-Prot
Match: DNAJ_LACRJ (Chaperone protein DnaJ OS=Lactobacillus reuteri (strain JCM 1112) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.7e-12
Identity = 39/78 (50.00%), Postives = 54/78 (69.23%), Query Frame = 1 

Query: 70  ADGSFYDLLGISESGSLAEIKRAYKQLARKYHPDVSPPGRAEEYTKRFIRVQEAYETLSD 129
           A+  +YD+LG+S+  S  +IKRAY++LA KYHPDV+    AEE   +F ++ EAYETLSD
Sbjct: 2   AEQDYYDILGVSKDASEKDIKRAYRRLAAKYHPDVNHEPGAEE---KFKKINEAYETLSD 61

Query: 130 PRRRALYDRDMVGGLQVA 148
            ++RA YD+    G Q A
Sbjct: 62  SQKRAQYDQFGSAGPQGA 76

[Close]
BLAST of Cp4.1LG08g02660 vs. Swiss-Prot
Match: DNAJ_ERYRH (Chaperone protein DnaJ OS=Erysipelothrix rhusiopathiae GN=dnaJ PE=2 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.2e-12
Identity = 36/65 (55.38%), Postives = 50/65 (76.92%), Query Frame = 1 

Query: 74  FYDLLGISESGSLAEIKRAYKQLARKYHPDVSPPGRAEEYTKRFIRVQEAYETLSDPRRR 133
           FY++LG+S+S + AEIK+AY+QLA+KYHPD++    AE    +F  VQEAYE LSD ++R
Sbjct: 7   FYEILGVSKSATDAEIKKAYRQLAKKYHPDINKEDGAE---AKFKEVQEAYEVLSDSQKR 66

Query: 134 ALYDR 139
           A YD+
Sbjct: 67  ANYDQ 68

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BLAST of Cp4.1LG08g02660 vs. Swiss-Prot
Match: DNAJ_THEEB (Chaperone protein DnaJ OS=Thermosynechococcus elongatus (strain BP-1) GN=dnaJ PE=3 SV=2)

HSP 1 Score: 73.9 bits (180), Expect = 2.2e-12
Identity = 36/65 (55.38%), Postives = 46/65 (70.77%), Query Frame = 1 

Query: 74  FYDLLGISESGSLAEIKRAYKQLARKYHPDVSPPGRAEEYTKRFIRVQEAYETLSDPRRR 133
           FY++LG+S S    E+KRAY++LARKYHPDV+    AEE   +F  +  AYE LSDP+ R
Sbjct: 5   FYEILGVSRSADAEELKRAYRRLARKYHPDVNKEPGAEE---KFKEINRAYEVLSDPQAR 64

Query: 134 ALYDR 139
           A YDR
Sbjct: 65  ANYDR 66

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BLAST of Cp4.1LG08g02660 vs. TrEMBL
Match: A0A0A0L4L9_CUCSA (Chaperone protein dnaJ 20, chloroplast OS=Cucumis sativus GN=Csa_3G129700 PE=4 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 2.2e-83
Identity = 158/203 (77.83%), Postives = 175/203 (86.21%), Query Frame = 1 

Query: 1   MQCSDFTYSGGDYRILIPSSPSITGRRKISGQRSRVFFPNTPPCNSSRLPSLSIRAKASF 60
           MQCSD T+SG D R  IPS+P+ T RR ISG RSRV FP+TPP NS+RLPSLSIRAKASF
Sbjct: 14  MQCSDLTFSGSDSRFYIPSNPTTTARRPISGYRSRVCFPHTPPFNSTRLPSLSIRAKASF 73

Query: 61  NGGIASSEAADGSFYDLLGISESGSLAEIKRAYKQLARKYHPDVSPPGRAEEYTKRFIRV 120
           N G  SSE A+GSFYDLLGIS+SGSL EIKRAYKQLARKYHPDVSPPG  EE TKRFIRV
Sbjct: 74  NEGFVSSEVAEGSFYDLLGISKSGSLEEIKRAYKQLARKYHPDVSPPGCVEENTKRFIRV 133

Query: 121 QEAYETLSDPRRRALYDRDMVGGLQVAFSARRRFDVDEGVPDKSAWKSCWKAQISELKRR 180
           QEAYETL+DPRRRALYDRDM+GGLQVAFSARRR+D DE V  KS W++ W+AQISELKRR
Sbjct: 134 QEAYETLADPRRRALYDRDMIGGLQVAFSARRRYDADEEVAQKSGWRNSWEAQISELKRR 193

Query: 181 SMDKDSKHNLSWGDRMRQQMNEQ 204
           SM+KD + N+SWG RMR+QMNEQ
Sbjct: 194 SMEKDLRPNMSWGARMRRQMNEQ 216

[Close]
BLAST of Cp4.1LG08g02660 vs. TrEMBL
Match: W9S291_9ROSA (Chaperone protein dnaJ 20 OS=Morus notabilis GN=L484_011075 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 6.2e-54
Identity = 117/205 (57.07%), Postives = 143/205 (69.76%), Query Frame = 1 

Query: 1   MQCSDFTYSGG-DYRILIPSSPSITGRRKISGQRSRVFFPNTPPCNSSRLPSLSIRA--K 60
           M+C+    SGG D R   P++ S           S V FP  P      + S  IRA  +
Sbjct: 1   MRCNGLAISGGSDSRFFFPTNSSTIYTASARNPSSTVLFPGRP------VFSTRIRATPR 60

Query: 61  ASFNGGIASSEAADGSFYDLLGISESGSLAEIKRAYKQLARKYHPDVSPPGRAEEYTKRF 120
           AS    +     A+ SFY+LLGI ESGSL EIK+AYKQLARKYHPDVSPPGR EEYT+ F
Sbjct: 61  ASAAAAVVGDRVAELSFYELLGIPESGSLGEIKQAYKQLARKYHPDVSPPGRVEEYTRTF 120

Query: 121 IRVQEAYETLSDPRRRALYDRDMVGGLQVAFSARRRFDVDEGVPDKSAWKSCWKAQISEL 180
           IRVQEAYETLSDPR RA+YDRDM  GL +AFSARRR+  DEG+ +KS WKS W++Q+SEL
Sbjct: 121 IRVQEAYETLSDPRLRAIYDRDMAKGLHLAFSARRRYQSDEGMEEKSEWKSHWQSQLSEL 180

Query: 181 KRRSMDKDSKHNLSWGDRMRQQMNE 203
           KRRS++KDS+ N+SWG RMR++M +
Sbjct: 181 KRRSVNKDSRGNMSWGARMRRRMED 199

[Close]
BLAST of Cp4.1LG08g02660 vs. TrEMBL
Match: A0A059B1U7_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H02689 PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 5.4e-50
Identity = 114/206 (55.34%), Postives = 139/206 (67.48%), Query Frame = 1 

Query: 1   MQCSDFTYSGGD-YRILIPSSPSITGRRKISGQRSRVFFPNTPPCNSSRLPSLSIRAKAS 60
           M+C      GGD  R+ +P  P      +  G R+  F P        R  ++   A   
Sbjct: 1   MRCYGVALPGGDPSRLCLPPPPPPFPSARTHGHRA--FLPTRV-----RFGAVRCAAGRI 60

Query: 61  FNGGIASS---EAADGSFYDLLGISESGSLAEIKRAYKQLARKYHPDVSPPGRAEEYTKR 120
            +G +A +    AA+ SFYDLLGI ESG+L EIK+AYKQLARKYHPDVSPPGR EEYT+R
Sbjct: 61  DDGAVADAARCSAAEASFYDLLGIPESGTLPEIKQAYKQLARKYHPDVSPPGRVEEYTQR 120

Query: 121 FIRVQEAYETLSDPRRRALYDRDMVGGLQVAFSARRRFDVDEGVPDKSAWKSCWKAQISE 180
           FIRVQEAYETLSDPRRRA+YDRD+  G+ +AFSARR +  DE + DKS WKS W+ Q+S 
Sbjct: 121 FIRVQEAYETLSDPRRRAVYDRDLARGIHLAFSARRPYRGDEDLEDKSEWKSRWQVQLSG 180

Query: 181 LKRRSMDKDSKHNLSWGDRMRQQMNE 203
           LKRRS  KDS+ N+SWG RMR+QM E
Sbjct: 181 LKRRSAHKDSRGNMSWGARMRKQMEE 199

[Close]
BLAST of Cp4.1LG08g02660 vs. TrEMBL
Match: B9RWC0_RICCO (Chaperone protein dnaJ 20, chloroplast, putative OS=Ricinus communis GN=RCOM_1017840 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 3.0e-48
Identity = 109/199 (54.77%), Postives = 134/199 (67.34%), Query Frame = 1 

Query: 1   MQCSDFTYSGGDYRILIPSSPSITGRRKISGQRSRVFFPNTPPCNSSRLPSLSIRAKASF 60
           M C++    GG   +      S +    I+  +   F    P    +R P  S + KA+ 
Sbjct: 1   MHCTNLMLPGGSDTVYFFHPSSSSSTTPITKSKPGPFLRLKPV---TRFPMSSFKTKAAV 60

Query: 61  NGGIASSEAADGSFYDLLGISESGSLAEIKRAYKQLARKYHPDVSPPGRAEEYTKRFIRV 120
           +  IA+    D SFY+LLGI ESGSL +IK+AYKQLARKYHPDVSPP R  EYT+RFI+V
Sbjct: 61  SDRIATK---DLSFYELLGIPESGSLIDIKQAYKQLARKYHPDVSPPDRVHEYTQRFIQV 120

Query: 121 QEAYETLSDPRRRALYDRDMVGGLQVAFSARRRFDVDEGVPDKSAWKSCWKAQISELKRR 180
           QEAYETLSDPRRRA YDRDM  GL +AFSARRR+  DE V   S WK+ W+AQ+SELKRR
Sbjct: 121 QEAYETLSDPRRRATYDRDMARGLHLAFSARRRYQSDEEVEVSSDWKNRWEAQLSELKRR 180

Query: 181 SMDKDSKHNLSWGDRMRQQ 200
           SM+KDS+ N+SW  RMR+Q
Sbjct: 181 SMNKDSEENMSWAARMRRQ 193

[Close]
BLAST of Cp4.1LG08g02660 vs. TrEMBL
Match: A0A061EJK6_THECC (Chaperone protein dnaJ 20 OS=Theobroma cacao GN=TCM_020242 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 1.5e-47
Identity = 103/184 (55.98%), Postives = 134/184 (72.83%), Query Frame = 1 

Query: 25  GRRKISGQRSRVFFPNTP------PCNSSRLPSLSIRAKASFNGGIASSEAADGSFYDLL 84
           G   I G  +R F P+T       P + +R+   S++ KA  N         + SFY+LL
Sbjct: 6   GLAAIPGTDARFFVPDTSFIRLRRPVDPTRVQFGSLKIKARIN-----EARKEVSFYELL 65

Query: 85  GISESGSLAEIKRAYKQLARKYHPDVSPPGRAEEYTKRFIRVQEAYETLSDPRRRALYDR 144
           GI E+G+L EIK+AYKQLARKYHPDVSPP R EEYT+RFIRVQEAYETLSDPRRRA YDR
Sbjct: 66  GIPETGTLPEIKQAYKQLARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPRRRASYDR 125

Query: 145 DMVGGLQVAFSARRRFDVDEGVPDKSAWKSCWKAQISELKRRSMDKDSKHNLSWGDRMRQ 203
           D+  G+ +AFSARRR+  DE + ++S WK+ W++Q+SELKRRSM++D++ N+SWG RMR+
Sbjct: 126 DLALGIHLAFSARRRYQYDEELEERSEWKNRWQSQLSELKRRSMNRDARGNMSWGARMRR 184

[Close]
BLAST of Cp4.1LG08g02660 vs. TAIR10
Match: AT4G13830.2 (AT4G13830.2 DNAJ-like 20)

HSP 1 Score: 166.8 bits (421), Expect = 1.4e-41
Identity = 92/158 (58.23%), Postives = 115/158 (72.78%), Query Frame = 1 

Query: 47  SRLPSLSIRAKASFNGGIASSEAADGSFYDLLGISESGSLAEIKRAYKQLARKYHPDVSP 106
           +R  S  I+++ + +  +  SE  D SFYDLLG++ES +L EIK+AYKQLARKYHPDVSP
Sbjct: 42  TRFSSTRIQSRLTHDDPVKQSE--DLSFYDLLGVTESVTLPEIKQAYKQLARKYHPDVSP 101

Query: 107 PGRAEEYTKRFIRVQEAYETLSDPRRRALYDRDMVGGLQVAFSARR--RFDVDEGVPDKS 166
           P R EEYT RFIRVQEAYETLSDPRRR LYDRD+  G   +FS RR  R+D  E V +KS
Sbjct: 102 PDRVEEYTDRFIRVQEAYETLSDPRRRVLYDRDLSMGFSFSFSGRRQNRYD-QEVVEEKS 161

Query: 167 AWKSCWKAQISELKRRSMDKDSKHNLSWGDRMRQQMNE 203
            WK+ W+ Q+S L+RRS  KD+ + +SW  RMR+Q  E
Sbjct: 162 EWKAKWQTQLSGLRRRSNQKDN-NTMSWAARMRRQQQE 195

[Close]
BLAST of Cp4.1LG08g02660 vs. TAIR10
Match: AT2G22360.1 (AT2G22360.1 DNAJ heat shock family protein)

HSP 1 Score: 72.8 bits (177), Expect = 2.8e-13
Identity = 37/78 (47.44%), Postives = 52/78 (66.67%), Query Frame = 1 

Query: 70  ADGSFYDLLGISESGSLAEIKRAYKQLARKYHPDVSPPGRAEEYTKRFIRVQEAYETLSD 129
           AD  +Y +LG+S++ + AEIK AY++LAR YHPDV+    AEE   +F  +  AYE LSD
Sbjct: 83  ADADYYSVLGVSKNATKAEIKSAYRKLARNYHPDVNKDPGAEE---KFKEISNAYEVLSD 142

Query: 130 PRRRALYDRDMVGGLQVA 148
             +++LYDR    GL+ A
Sbjct: 143 DEKKSLYDRYGEAGLKGA 157

[Close]
BLAST of Cp4.1LG08g02660 vs. TAIR10
Match: AT4G39960.1 (AT4G39960.1 Molecular chaperone Hsp40/DnaJ family protein)

HSP 1 Score: 72.4 bits (176), Expect = 3.6e-13
Identity = 37/78 (47.44%), Postives = 52/78 (66.67%), Query Frame = 1 

Query: 70  ADGSFYDLLGISESGSLAEIKRAYKQLARKYHPDVSPPGRAEEYTKRFIRVQEAYETLSD 129
           AD  FY +LG+S++ + AEIK AY++LAR YHPDV+    AE+   +F  +  AYE LSD
Sbjct: 82  ADTDFYSVLGVSKNATKAEIKSAYRKLARSYHPDVNKDAGAED---KFKEISNAYEILSD 141

Query: 130 PRRRALYDRDMVGGLQVA 148
             +R+LYDR    G++ A
Sbjct: 142 DEKRSLYDRYGEAGVKGA 156

[Close]
BLAST of Cp4.1LG08g02660 vs. TAIR10
Match: AT1G80030.1 (AT1G80030.1 Molecular chaperone Hsp40/DnaJ family protein)

HSP 1 Score: 67.8 bits (164), Expect = 8.9e-12
Identity = 34/70 (48.57%), Postives = 48/70 (68.57%), Query Frame = 1 

Query: 69  AADGSFYDLLGISESGSLAEIKRAYKQLARKYHPDVSPPGRAEEYTKRFIRVQEAYETLS 128
           A  G +Y  LG+S+S +  EIK AY++LAR+YHPDV+    A   T++F  +  AYE LS
Sbjct: 71  ATSGDYYATLGVSKSANNKEIKAAYRRLARQYHPDVNKEPGA---TEKFKEISAAYEVLS 130

Query: 129 DPRRRALYDR 139
           D ++RALYD+
Sbjct: 131 DEQKRALYDQ 137

[Close]
BLAST of Cp4.1LG08g02660 vs. TAIR10
Match: AT3G17830.1 (AT3G17830.1 Molecular chaperone Hsp40/DnaJ family protein)

HSP 1 Score: 67.0 bits (162), Expect = 1.5e-11
Identity = 49/149 (32.89%), Postives = 76/149 (51.01%), Query Frame = 1 

Query: 16  LIPS-SPSITGRRKISGQRSRVFFPNTPPCNSSRLPSLSIRAKASFNGGIAS---SEAAD 75
           LIPS +P+ + R +     +  + P T       LP  S   +   +GG      + AA 
Sbjct: 9   LIPSINPAHSFRHQFPQPNASFYLPPT-------LPIFSRVRRFGISGGYRRRVITMAAG 68

Query: 76  GSFYDLLGISESGSLAEIKRAYKQLARKYHPDVSPPGRAEEYTKRFIRVQEAYETLSDPR 135
              Y  L ++ + +L EIK +Y++LARKYHPD++    AE+   +F ++  AYE LSD  
Sbjct: 69  TDHYSTLNVNRNATLQEIKSSYRKLARKYHPDMNKNPGAED---KFKQISAAYEVLSDEE 128

Query: 136 RRALYDRDMVGGLQVAFSARRRFDVDEGV 161
           +R+ YDR    GL+  F+  +  D   GV
Sbjct: 129 KRSAYDRFGEAGLEGDFNGSQ--DTSPGV 145

[Close]
BLAST of Cp4.1LG08g02660 vs. NCBI nr
Match: gi|659075782|ref|XP_008438327.1| (PREDICTED: chaperone protein dnaJ 20, chloroplastic-like [Cucumis melo])

HSP 1 Score: 328.9 bits (842), Expect = 6.1e-87
Identity = 162/204 (79.41%), Postives = 181/204 (88.73%), Query Frame = 1 

Query: 1   MQCSDFTYSGGDYRILIPSSPSITGRRKISGQRSRVFFPNTPPCNSSRLPSLSIRAKASF 60
           MQCSDFT+SG D R  IPS+P+I+ RR ISG RSRVFFP+TPP NS+RLPSLSIRAKASF
Sbjct: 27  MQCSDFTFSGSDSRFYIPSNPTISARRPISGYRSRVFFPHTPPFNSTRLPSLSIRAKASF 86

Query: 61  NGGIASSEAADGSFYDLLGISESGSLAEIKRAYKQLARKYHPDVSPPGRAEEYTKRFIRV 120
           N G  SSE A+GSFYDLLGIS+SGSLAEIKRAYKQLARKYHPDVSPPG AEEYTK FIRV
Sbjct: 87  NEGFVSSEVAEGSFYDLLGISQSGSLAEIKRAYKQLARKYHPDVSPPGGAEEYTKMFIRV 146

Query: 121 QEAYETLSDPRRRALYDRDMVGGLQVAFSARRRFDVDEGVPDKSAWKSCWKAQISELKRR 180
           QEAYETLSDPRRRALYDRDM+GGLQVAFSARRR+D  E V +KS W++ W+AQISELKRR
Sbjct: 147 QEAYETLSDPRRRALYDRDMIGGLQVAFSARRRYDAAEEVAEKSGWRNSWEAQISELKRR 206

Query: 181 SMDKDSKHNLSWGDRMRQQMNEQV 205
           SM+KD + N+SWG RMR+QMNEQ+
Sbjct: 207 SMEKDLRQNMSWGARMRRQMNEQI 230

[Close]
BLAST of Cp4.1LG08g02660 vs. NCBI nr
Match: gi|449432390|ref|XP_004133982.1| (PREDICTED: chaperone protein dnaJ 20, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 316.6 bits (810), Expect = 3.1e-83
Identity = 158/203 (77.83%), Postives = 175/203 (86.21%), Query Frame = 1 

Query: 1   MQCSDFTYSGGDYRILIPSSPSITGRRKISGQRSRVFFPNTPPCNSSRLPSLSIRAKASF 60
           MQCSD T+SG D R  IPS+P+ T RR ISG RSRV FP+TPP NS+RLPSLSIRAKASF
Sbjct: 14  MQCSDLTFSGSDSRFYIPSNPTTTARRPISGYRSRVCFPHTPPFNSTRLPSLSIRAKASF 73

Query: 61  NGGIASSEAADGSFYDLLGISESGSLAEIKRAYKQLARKYHPDVSPPGRAEEYTKRFIRV 120
           N G  SSE A+GSFYDLLGIS+SGSL EIKRAYKQLARKYHPDVSPPG  EE TKRFIRV
Sbjct: 74  NEGFVSSEVAEGSFYDLLGISKSGSLEEIKRAYKQLARKYHPDVSPPGCVEENTKRFIRV 133

Query: 121 QEAYETLSDPRRRALYDRDMVGGLQVAFSARRRFDVDEGVPDKSAWKSCWKAQISELKRR 180
           QEAYETL+DPRRRALYDRDM+GGLQVAFSARRR+D DE V  KS W++ W+AQISELKRR
Sbjct: 134 QEAYETLADPRRRALYDRDMIGGLQVAFSARRRYDADEEVAQKSGWRNSWEAQISELKRR 193

Query: 181 SMDKDSKHNLSWGDRMRQQMNEQ 204
           SM+KD + N+SWG RMR+QMNEQ
Sbjct: 194 SMEKDLRPNMSWGARMRRQMNEQ 216

[Close]
BLAST of Cp4.1LG08g02660 vs. NCBI nr
Match: gi|703148387|ref|XP_010109333.1| (Chaperone protein dnaJ 20 [Morus notabilis])

HSP 1 Score: 218.8 bits (556), Expect = 8.9e-54
Identity = 117/205 (57.07%), Postives = 143/205 (69.76%), Query Frame = 1 

Query: 1   MQCSDFTYSGG-DYRILIPSSPSITGRRKISGQRSRVFFPNTPPCNSSRLPSLSIRA--K 60
           M+C+    SGG D R   P++ S           S V FP  P      + S  IRA  +
Sbjct: 1   MRCNGLAISGGSDSRFFFPTNSSTIYTASARNPSSTVLFPGRP------VFSTRIRATPR 60

Query: 61  ASFNGGIASSEAADGSFYDLLGISESGSLAEIKRAYKQLARKYHPDVSPPGRAEEYTKRF 120
           AS    +     A+ SFY+LLGI ESGSL EIK+AYKQLARKYHPDVSPPGR EEYT+ F
Sbjct: 61  ASAAAAVVGDRVAELSFYELLGIPESGSLGEIKQAYKQLARKYHPDVSPPGRVEEYTRTF 120

Query: 121 IRVQEAYETLSDPRRRALYDRDMVGGLQVAFSARRRFDVDEGVPDKSAWKSCWKAQISEL 180
           IRVQEAYETLSDPR RA+YDRDM  GL +AFSARRR+  DEG+ +KS WKS W++Q+SEL
Sbjct: 121 IRVQEAYETLSDPRLRAIYDRDMAKGLHLAFSARRRYQSDEGMEEKSEWKSHWQSQLSEL 180

Query: 181 KRRSMDKDSKHNLSWGDRMRQQMNE 203
           KRRS++KDS+ N+SWG RMR++M +
Sbjct: 181 KRRSVNKDSRGNMSWGARMRRRMED 199

[Close]
BLAST of Cp4.1LG08g02660 vs. NCBI nr
Match: gi|1009139653|ref|XP_015887231.1| (PREDICTED: chaperone protein dnaJ 20, chloroplastic [Ziziphus jujuba])

HSP 1 Score: 207.6 bits (527), Expect = 2.0e-50
Identity = 102/150 (68.00%), Postives = 122/150 (81.33%), Query Frame = 1 

Query: 53  SIRAKASFNGGIASSEAADGSFYDLLGISESGSLAEIKRAYKQLARKYHPDVSPPGRAEE 112
           ++R KA+ N G   SEAA+ SFY+LLGI E GSL +IK+AYKQLARKYHPDVSPPGR EE
Sbjct: 58  TVRVKATVNDGFVFSEAAELSFYELLGIPEWGSLVDIKQAYKQLARKYHPDVSPPGRVEE 117

Query: 113 YTKRFIRVQEAYETLSDPRRRALYDRDMVGGLQVAFSARRRFDVDEGVPDKSAWKSCWKA 172
           YT+RFIRVQEAYETLSDPRRRALYDRDM  G+ +AFSAR+R+  DEG+ DK  WK  W++
Sbjct: 118 YTQRFIRVQEAYETLSDPRRRALYDRDMAKGIHLAFSARKRYQKDEGMEDKGEWKYRWQS 177

Query: 173 QISELKRRSMDKDSKHNLSWGDRMRQQMNE 203
           Q+SELKRRS +KD   N+SWG RMR++  E
Sbjct: 178 QLSELKRRSTNKDMTGNMSWGARMRRRREE 207

[Close]
BLAST of Cp4.1LG08g02660 vs. NCBI nr
Match: gi|698481242|ref|XP_009787628.1| (PREDICTED: chaperone protein dnaJ 20, chloroplastic-like [Nicotiana sylvestris])

HSP 1 Score: 206.8 bits (525), Expect = 3.5e-50
Identity = 109/187 (58.29%), Postives = 138/187 (73.80%), Query Frame = 1 

Query: 18  PSSPSITGRRKISGQRSRVFFPNTPPCNSSRLPSL--SIRAKASFNGGIASSEAADGSFY 77
           P  PSI+     S    R++FPN P  N   L +   S++AK+  N  ++ +E  + SFY
Sbjct: 14  PPPPSISP----SSLHPRIYFPNYPS-NFQVLGTKFGSLKAKSKLNDVVSYAEIDNRSFY 73

Query: 78  DLLGISESGSLAEIKRAYKQLARKYHPDVSPPGRAEEYTKRFIRVQEAYETLSDPRRRAL 137
           DLLGISE+G+L EIK+AYKQLARKYHPDVSPP R EEYT+RFIRVQEAYETLSDPR R +
Sbjct: 74  DLLGISETGTLLEIKQAYKQLARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPRMRDM 133

Query: 138 YDRDMVGGLQVAFSARRRFDVDEGVPDKSAWKSCWKAQISELKRRSMDKDSKHNLSWGDR 197
           YD+DM  GL  AFSARRR+  DE + DK  W++ W++Q+S+LKRRSM KDS +++SWG R
Sbjct: 134 YDKDMAKGLHFAFSARRRYQSDESMEDKGEWRNRWQSQLSDLKRRSMHKDSSNSMSWGAR 193

Query: 198 MRQQMNE 203
           MR+Q NE
Sbjct: 194 MRRQRNE 195

The following BLAST results are available for this feature:
BLAST of Cp4.1LG08g02660 vs. Swiss-Prot
Match NameE-valueIdentityDescription
DNJ20_ARATH2.5e-4058.23Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis thaliana GN=ATJ20 PE=1 S... [more]
DNAJ_LACRD1.7e-1250.00Chaperone protein DnaJ OS=Lactobacillus reuteri (strain DSM 20016) GN=dnaJ PE=3 ... [more]
DNAJ_LACRJ1.7e-1250.00Chaperone protein DnaJ OS=Lactobacillus reuteri (strain JCM 1112) GN=dnaJ PE=3 S... [more]
DNAJ_ERYRH2.2e-1255.38Chaperone protein DnaJ OS=Erysipelothrix rhusiopathiae GN=dnaJ PE=2 SV=1[more]
DNAJ_THEEB2.2e-1255.38Chaperone protein DnaJ OS=Thermosynechococcus elongatus (strain BP-1) GN=dnaJ PE... [more]
BLAST of Cp4.1LG08g02660 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L4L9_CUCSA2.2e-8377.83Chaperone protein dnaJ 20, chloroplast OS=Cucumis sativus GN=Csa_3G129700 PE=4 S... [more]
W9S291_9ROSA6.2e-5457.07Chaperone protein dnaJ 20 OS=Morus notabilis GN=L484_011075 PE=4 SV=1[more]
A0A059B1U7_EUCGR5.4e-5055.34Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H02689 PE=4 SV=1[more]
B9RWC0_RICCO3.0e-4854.77Chaperone protein dnaJ 20, chloroplast, putative OS=Ricinus communis GN=RCOM_101... [more]
A0A061EJK6_THECC1.5e-4755.98Chaperone protein dnaJ 20 OS=Theobroma cacao GN=TCM_020242 PE=4 SV=1[more]
BLAST of Cp4.1LG08g02660 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G13830.21.4e-4158.23 DNAJ-like 20[more]
AT2G22360.12.8e-1347.44 DNAJ heat shock family protein[more]
AT4G39960.13.6e-1347.44 Molecular chaperone Hsp40/DnaJ family protein[more]
AT1G80030.18.9e-1248.57 Molecular chaperone Hsp40/DnaJ family protein[more]
AT3G17830.11.5e-1132.89 Molecular chaperone Hsp40/DnaJ family protein[more]
BLAST of Cp4.1LG08g02660 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659075782|ref|XP_008438327.1|6.1e-8779.41PREDICTED: chaperone protein dnaJ 20, chloroplastic-like [Cucumis melo][more]
gi|449432390|ref|XP_004133982.1|3.1e-8377.83PREDICTED: chaperone protein dnaJ 20, chloroplastic-like [Cucumis sativus][more]
gi|703148387|ref|XP_010109333.1|8.9e-5457.07Chaperone protein dnaJ 20 [Morus notabilis][more]
gi|1009139653|ref|XP_015887231.1|2.0e-5068.00PREDICTED: chaperone protein dnaJ 20, chloroplastic [Ziziphus jujuba][more]
gi|698481242|ref|XP_009787628.1|3.5e-5058.29PREDICTED: chaperone protein dnaJ 20, chloroplastic-like [Nicotiana sylvestris][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR018253DnaJ_domain_CS
IPR001623DnaJ_domain
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0044237 cellular metabolic process
biological_process GO:0071704 organic substance metabolic process
biological_process GO:0044238 primary metabolic process
biological_process GO:0019222 regulation of metabolic process
biological_process GO:0008152 metabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0043231 intracellular membrane-bounded organelle
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG08g02660.1Cp4.1LG08g02660.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001623DnaJ domainPRINTSPR00625JDOMAINcoord: 132..151
score: 7.1E-17coord: 112..132
score: 7.1E-17coord: 75..93
score: 7.1E-17coord: 93..108
score: 7.1
IPR001623DnaJ domainGENE3DG3DSA:1.10.287.110coord: 68..145
score: 8.2
IPR001623DnaJ domainPFAMPF00226DnaJcoord: 74..137
score: 5.9
IPR001623DnaJ domainSMARTSM00271dnaj_3coord: 72..132
score: 3.3
IPR001623DnaJ domainPROFILEPS50076DNAJ_2coord: 73..140
score: 2
IPR001623DnaJ domainunknownSSF46565Chaperone J-domaincoord: 73..145
score: 2.88
IPR018253DnaJ domain, conserved sitePROSITEPS00636DNAJ_1coord: 117..136
scor
NoneNo IPR availablePANTHERPTHR24078DNAJ HOMOLOG SUBFAMILY C MEMBERcoord: 74..138
score: 2.8
NoneNo IPR availablePANTHERPTHR24078:SF222SUBFAMILY NOT NAMEDcoord: 74..138
score: 2.8

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG08g02660Cucsa.256640Cucumber (Gy14) v1cgycpeB0687
Cp4.1LG08g02660CmaCh14G019070Cucurbita maxima (Rimu)cmacpeB292
Cp4.1LG08g02660CmaCh17G000850Cucurbita maxima (Rimu)cmacpeB411
Cp4.1LG08g02660CmaCh06G012000Cucurbita maxima (Rimu)cmacpeB854
Cp4.1LG08g02660CmoCh17G000910Cucurbita moschata (Rifu)cmocpeB373
Cp4.1LG08g02660CmoCh14G019620Cucurbita moschata (Rifu)cmocpeB254
Cp4.1LG08g02660CmoCh06G012370Cucurbita moschata (Rifu)cmocpeB796
Cp4.1LG08g02660Cla021401Watermelon (97103) v1cpewmB845
Cp4.1LG08g02660Csa3G129700Cucumber (Chinese Long) v2cpecuB859
Cp4.1LG08g02660MELO3C006295Melon (DHL92) v3.5.1cpemeB813
Cp4.1LG08g02660ClCG05G003140Watermelon (Charleston Gray)cpewcgB787
Cp4.1LG08g02660CSPI03G10650Wild cucumber (PI 183967)cpecpiB861
Cp4.1LG08g02660Lsi05G018600Bottle gourd (USVL1VR-Ls)cpelsiB714
Cp4.1LG08g02660MELO3C006295.2Melon (DHL92) v3.6.1cpemedB951
Cp4.1LG08g02660CsaV3_3G010760Cucumber (Chinese Long) v3cpecucB1056
Cp4.1LG08g02660Bhi01G000145Wax gourdcpewgoB1111
Cp4.1LG08g02660CsGy3G010700Cucumber (Gy14) v2cgybcpeB454
Cp4.1LG08g02660Carg10152Silver-seed gourdcarcpeB0329
Cp4.1LG08g02660Carg06307Silver-seed gourdcarcpeB1333
Cp4.1LG08g02660Carg11046Silver-seed gourdcarcpeB1507
Cp4.1LG08g02660Carg24775Silver-seed gourdcarcpeB0251
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG08g02660Cp4.1LG12g00650Cucurbita pepo (Zucchini)cpecpeB194
Cp4.1LG08g02660Cp4.1LG17g02940Cucurbita pepo (Zucchini)cpecpeB342
Cp4.1LG08g02660Cp4.1LG03g18080Cucurbita pepo (Zucchini)cpecpeB482
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG08g02660Cucumber (Chinese Long) v3cpecucB1046
Cp4.1LG08g02660Bottle gourd (USVL1VR-Ls)cpelsiB697
Cp4.1LG08g02660Watermelon (Charleston Gray)cpewcgB788
Cp4.1LG08g02660Watermelon (97103) v1cpewmB853
Cp4.1LG08g02660Melon (DHL92) v3.5.1cpemeB804
Cp4.1LG08g02660Cucumber (Gy14) v2cgybcpeB279