Cp4.1LG03g18080 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG03g18080
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionChaperone protein dnaJ 20, chloroplast
LocationCp4.1LG03 : 12381703 .. 12382955 (+)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGTACAAATGATTCATTTGGACGTCCAGTATAAATAGCAGAAATACAGAGGACGGAAGATAGACGGAGAGAAACAGAGAAATGCAGTGCTCCGATTTTACCTTCTCAGGGAGCGATTCACGCTTCTACATCCCTTCGAGCCCTAGCATTACTGGCCGGCGACCAATTACTGGCCACCGATCTGGTATTTTCTTTCCCAACACTCTTCCGTGCAACTTGATGCGCTTGCCGTCTCTTTCGATCAGAGCCAAGGCATCGTTCAACGAAGGAACTGTCTCCTCCGAGGTTGCCGATGGCTCCTTCTACGATTTGCTTGGTGTATCTGAGTCCGTATCCTTGGCGGAAATCAAGCGCGCGTACAAGCAGCTCGCCCGGAAGTACCATCCGGACGTGTCGCCGATCGGCCGTGCGGAGGAGTATACGAAAAGGTTCATTCGTGTTCAGGAGGCGTATGAGACATTGTCAGATCCGAGGAGGAGAGCTCTATATGATAGAGATATGGTTGGAGGTCTTCAAGTCGCGTTCTCTGCTTGGAGACTATACGATGCCGATCAGGTATTTGTTCAGTCTACCGATTTTAATTTGTTTTCCGGTAATTTAGGGGTAATCTGGTTGAATGTTTGCGGATTTTGAAATCTCCTGTGTTGATTTTGTGTTTGCCCTTGCTTTCGAGGTGATTTCGTGTTTAATTTCTCAGATGTTTTCCGGAGAGATTAAAATGAGTGAAGTATTTGATCTCAACGTATATTTGATTTTGGATTCTTTTGAGTGAGGAAATGAAACGTCGTTTTATTCTGCCTCCTGATTCTCTGTCTCTTTCCATTTTTTGTTTTTCTGATTGGTGGAGAGTGGTACTGTTTCTGTTGGAACAAGGTTCTTCCATTCGTTATCGTGATTTATTCTGTAATTCAGAGATTGAATGGGATCGATCAAGCTGATGATTTCTCGATAACTTACTCCAAATATGGAATTTCGTTACCTTTTCAACATCTTCTGTTTATATGCAACTTTTTTCACATAATTTTCTTTCAGTTTTCACTTTACTGTTGTGTTCTAGCGAGTCTGTAGAAATCTTTTTCCTCCATATAGAATCTCCAAATTTGATTTGGATTCAGGAAGCTCCAGAGAAAAGTGGATGGAGGAGTTGTTGGCAGTCTCAGATATCAGAATTGAAGAGAAGAAGCATGAACAAGGATTCGAGTCAAAATATGTCCTGGGGAGCTCGAATGCGCCGGCAAATGAATGAACAG

mRNA sequence

ATGTCAGAAATGCAGTGCTCCGATTTTACCTTCTCAGGGAGCGATTCACGCTTCTACATCCCTTCGAGCCCTAGCATTACTGGCCGGCGACCAATTACTGGCCACCGATCTGGTATTTTCTTTCCCAACACTCTTCCGTGCAACTTGATGCGCTTGCCGTCTCTTTCGATCAGAGCCAAGGCATCGTTCAACGAAGGAACTGTCTCCTCCGAGGTTGCCGATGGCTCCTTCTACGATTTGCTTGGTGTATCTGAGTCCGTATCCTTGGCGGAAATCAAGCGCGCGTACAAGCAGCTCGCCCGGAAGTACCATCCGGACGTGTCGCCGATCGGCCGTGCGGAGGAGTATACGAAAAGGTTCATTCGTGTTCAGGAGGCGTATGAGACATTGTCAGATCCGAGGAGGAGAGCTCTATATGATAGAGATATGGTTGGAGGTCTTCAAGTCGCGTTCTCTGCTTGGAGACTATACGATGCCGATCAGGAAGCTCCAGAGAAAAGTGGATGGAGGAGTTGTTGGCAGTCTCAGATATCAGAATTGAAGAGAAGAAGCATGAACAAGGATTCGAGTCAAAATATGTCCTGGGGAGCTCGAATGCGCCGGCAAATGAATGAACAG

Coding sequence (CDS)

ATGTCAGAAATGCAGTGCTCCGATTTTACCTTCTCAGGGAGCGATTCACGCTTCTACATCCCTTCGAGCCCTAGCATTACTGGCCGGCGACCAATTACTGGCCACCGATCTGGTATTTTCTTTCCCAACACTCTTCCGTGCAACTTGATGCGCTTGCCGTCTCTTTCGATCAGAGCCAAGGCATCGTTCAACGAAGGAACTGTCTCCTCCGAGGTTGCCGATGGCTCCTTCTACGATTTGCTTGGTGTATCTGAGTCCGTATCCTTGGCGGAAATCAAGCGCGCGTACAAGCAGCTCGCCCGGAAGTACCATCCGGACGTGTCGCCGATCGGCCGTGCGGAGGAGTATACGAAAAGGTTCATTCGTGTTCAGGAGGCGTATGAGACATTGTCAGATCCGAGGAGGAGAGCTCTATATGATAGAGATATGGTTGGAGGTCTTCAAGTCGCGTTCTCTGCTTGGAGACTATACGATGCCGATCAGGAAGCTCCAGAGAAAAGTGGATGGAGGAGTTGTTGGCAGTCTCAGATATCAGAATTGAAGAGAAGAAGCATGAACAAGGATTCGAGTCAAAATATGTCCTGGGGAGCTCGAATGCGCCGGCAAATGAATGAACAG

Protein sequence

MSEMQCSDFTFSGSDSRFYIPSSPSITGRRPITGHRSGIFFPNTLPCNLMRLPSLSIRAKASFNEGTVSSEVADGSFYDLLGVSESVSLAEIKRAYKQLARKYHPDVSPIGRAEEYTKRFIRVQEAYETLSDPRRRALYDRDMVGGLQVAFSAWRLYDADQEAPEKSGWRSCWQSQISELKRRSMNKDSSQNMSWGARMRRQMNEQ
Homology
[Close]
BLAST of Cp4.1LG03g18080 vs. Swiss-Prot
Match: DNJ20_ARATH (Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis thaliana GN=ATJ20 PE=1 SV=2)

HSP 1 Score: 169.1 bits (427), Expect = 5.1e-41
Identity = 97/170 (57.06%), Postives = 118/170 (69.41%), Query Frame = 1 

Query: 42  PNTLPCNLM-----RLPSLSIRAKASFNEGTVSSEVADGSFYDLLGVSESVSLAEIKRAY 101
           P ++P  +      R  S  I+++ + ++    SE  D SFYDLLGV+ESV+L EIK+AY
Sbjct: 29  PTSIPTTISYPTRTRFSSTRIQSRLTHDDPVKQSE--DLSFYDLLGVTESVTLPEIKQAY 88

Query: 102 KQLARKYHPDVSPIGRAEEYTKRFIRVQEAYETLSDPRRRALYDRDMVGGLQVAFSAWRL 161
           KQLARKYHPDVSP  R EEYT RFIRVQEAYETLSDPRRR LYDRD+  G   +FS  R 
Sbjct: 89  KQLARKYHPDVSPPDRVEEYTDRFIRVQEAYETLSDPRRRVLYDRDLSMGFSFSFSGRRQ 148

Query: 162 YDADQE-APEKSGWRSCWQSQISELKRRSMNKDSSQNMSWGARMRRQMNE 206
              DQE   EKS W++ WQ+Q+S L+RRS  KD++  MSW ARMRRQ  E
Sbjct: 149 NRYDQEVVEEKSEWKAKWQTQLSGLRRRSNQKDNN-TMSWAARMRRQQQE 195

[Close]
BLAST of Cp4.1LG03g18080 vs. Swiss-Prot
Match: DNAJ_LACF3 (Chaperone protein DnaJ OS=Lactobacillus fermentum (strain NBRC 3956 / LMG 18251) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.3e-12
Identity = 40/77 (51.95%), Postives = 53/77 (68.83%), Query Frame = 1 

Query: 72  VADGSFYDLLGVSESVSLAEIKRAYKQLARKYHPDVSPIGRAEEYTKRFIRVQEAYETLS 131
           +A+   YD+LGV +  S AEIKRAY++LA KYHPDV+    AE   K+F ++ EAYETLS
Sbjct: 1   MAEEDLYDVLGVKKDASEAEIKRAYRKLAAKYHPDVNHEPGAE---KKFKKINEAYETLS 60

Query: 132 DPRRRALYDRDMVGGLQ 149
           D ++RA YD+    G Q
Sbjct: 61  DDQKRAQYDQFGTTGSQ 74

[Close]
BLAST of Cp4.1LG03g18080 vs. Swiss-Prot
Match: DNAJ_LACRD (Chaperone protein DnaJ OS=Lactobacillus reuteri (strain DSM 20016) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.3e-12
Identity = 40/79 (50.63%), Postives = 55/79 (69.62%), Query Frame = 1 

Query: 72  VADGSFYDLLGVSESVSLAEIKRAYKQLARKYHPDVSPIGRAEEYTKRFIRVQEAYETLS 131
           +A+  +YD+LGVS+  S  +IKRAY++LA KYHPDV+    AEE   +F ++ EAYETLS
Sbjct: 1   MAEQDYYDILGVSKDASEKDIKRAYRRLAAKYHPDVNHEPGAEE---KFKKINEAYETLS 60

Query: 132 DPRRRALYDRDMVGGLQVA 151
           D ++RA YD+    G Q A
Sbjct: 61  DSQKRAQYDQFGSAGPQGA 76

[Close]
BLAST of Cp4.1LG03g18080 vs. Swiss-Prot
Match: DNAJ_LACRJ (Chaperone protein DnaJ OS=Lactobacillus reuteri (strain JCM 1112) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.3e-12
Identity = 40/79 (50.63%), Postives = 55/79 (69.62%), Query Frame = 1 

Query: 72  VADGSFYDLLGVSESVSLAEIKRAYKQLARKYHPDVSPIGRAEEYTKRFIRVQEAYETLS 131
           +A+  +YD+LGVS+  S  +IKRAY++LA KYHPDV+    AEE   +F ++ EAYETLS
Sbjct: 1   MAEQDYYDILGVSKDASEKDIKRAYRRLAAKYHPDVNHEPGAEE---KFKKINEAYETLS 60

Query: 132 DPRRRALYDRDMVGGLQVA 151
           D ++RA YD+    G Q A
Sbjct: 61  DSQKRAQYDQFGSAGPQGA 76

[Close]
BLAST of Cp4.1LG03g18080 vs. Swiss-Prot
Match: DNAJ_STRA1 (Chaperone protein DnaJ OS=Streptococcus agalactiae serotype Ia (strain ATCC 27591 / A909 / CDC SS700) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.7e-12
Identity = 37/78 (47.44%), Postives = 52/78 (66.67%), Query Frame = 1 

Query: 77  FYDLLGVSESVSLAEIKRAYKQLARKYHPDVSPIGRAEEYTKRFIRVQEAYETLSDPRRR 136
           FYD LGVS+  S  EIK+AY+++++KYHPD++    AEE   ++  VQEAYETLSD ++R
Sbjct: 6   FYDRLGVSKDASQDEIKKAYRRMSKKYHPDINKEAGAEE---KYKEVQEAYETLSDTQKR 65

Query: 137 ALYDRDMVGGLQVAFSAW 155
           A YD+    G    F  +
Sbjct: 66  AAYDQYGAAGANGGFGGF 80

[Close]
BLAST of Cp4.1LG03g18080 vs. TrEMBL
Match: A0A0A0L4L9_CUCSA (Chaperone protein dnaJ 20, chloroplast OS=Cucumis sativus GN=Csa_3G129700 PE=4 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 5.2e-85
Identity = 163/204 (79.90%), Postives = 179/204 (87.75%), Query Frame = 1 

Query: 3   EMQCSDFTFSGSDSRFYIPSSPSITGRRPITGHRSGIFFPNTLPCNLMRLPSLSIRAKAS 62
           EMQCSD TFSGSDSRFYIPS+P+ T RRPI+G+RS + FP+T P N  RLPSLSIRAKAS
Sbjct: 13  EMQCSDLTFSGSDSRFYIPSNPTTTARRPISGYRSRVCFPHTPPFNSTRLPSLSIRAKAS 72

Query: 63  FNEGTVSSEVADGSFYDLLGVSESVSLAEIKRAYKQLARKYHPDVSPIGRAEEYTKRFIR 122
           FNEG VSSEVA+GSFYDLLG+S+S SL EIKRAYKQLARKYHPDVSP G  EE TKRFIR
Sbjct: 73  FNEGFVSSEVAEGSFYDLLGISKSGSLEEIKRAYKQLARKYHPDVSPPGCVEENTKRFIR 132

Query: 123 VQEAYETLSDPRRRALYDRDMVGGLQVAFSAWRLYDADQEAPEKSGWRSCWQSQISELKR 182
           VQEAYETL+DPRRRALYDRDM+GGLQVAFSA R YDAD+E  +KSGWR+ W++QISELKR
Sbjct: 133 VQEAYETLADPRRRALYDRDMIGGLQVAFSARRRYDADEEVAQKSGWRNSWEAQISELKR 192

Query: 183 RSMNKDSSQNMSWGARMRRQMNEQ 207
           RSM KD   NMSWGARMRRQMNEQ
Sbjct: 193 RSMEKDLRPNMSWGARMRRQMNEQ 216

[Close]
BLAST of Cp4.1LG03g18080 vs. TrEMBL
Match: W9S291_9ROSA (Chaperone protein dnaJ 20 OS=Morus notabilis GN=L484_011075 PE=4 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 1.7e-51
Identity = 119/205 (58.05%), Postives = 141/205 (68.78%), Query Frame = 1 

Query: 4   MQCSDFTFSG-SDSRFYIPSSPSITGRRPITGHRSGIFFPNTLPCNLMRLPSLSIRA--K 63
           M+C+    SG SDSRF+ P++ S           S + FP         + S  IRA  +
Sbjct: 1   MRCNGLAISGGSDSRFFFPTNSSTIYTASARNPSSTVLFPGR------PVFSTRIRATPR 60

Query: 64  ASFNEGTVSSEVADGSFYDLLGVSESVSLAEIKRAYKQLARKYHPDVSPIGRAEEYTKRF 123
           AS     V   VA+ SFY+LLG+ ES SL EIK+AYKQLARKYHPDVSP GR EEYT+ F
Sbjct: 61  ASAAAAVVGDRVAELSFYELLGIPESGSLGEIKQAYKQLARKYHPDVSPPGRVEEYTRTF 120

Query: 124 IRVQEAYETLSDPRRRALYDRDMVGGLQVAFSAWRLYDADQEAPEKSGWRSCWQSQISEL 183
           IRVQEAYETLSDPR RA+YDRDM  GL +AFSA R Y +D+   EKS W+S WQSQ+SEL
Sbjct: 121 IRVQEAYETLSDPRLRAIYDRDMAKGLHLAFSARRRYQSDEGMEEKSEWKSHWQSQLSEL 180

Query: 184 KRRSMNKDSSQNMSWGARMRRQMNE 206
           KRRS+NKDS  NMSWGARMRR+M +
Sbjct: 181 KRRSVNKDSRGNMSWGARMRRRMED 199

[Close]
BLAST of Cp4.1LG03g18080 vs. TrEMBL
Match: A0A061EJK6_THECC (Chaperone protein dnaJ 20 OS=Theobroma cacao GN=TCM_020242 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 1.5e-47
Identity = 110/200 (55.00%), Postives = 137/200 (68.50%), Query Frame = 1 

Query: 6   CSDFTFSGSDSRFYIPSSPSITGRRPITGHRSGIFFPNTLPCNLMRLPSLSIRAKASFNE 65
           C      G+D+RF++P +  I  RRP+               +  R+   S++ KA  NE
Sbjct: 5   CGLAAIPGTDARFFVPDTSFIRLRRPV---------------DPTRVQFGSLKIKARINE 64

Query: 66  GTVSSEVADGSFYDLLGVSESVSLAEIKRAYKQLARKYHPDVSPIGRAEEYTKRFIRVQE 125
                EV   SFY+LLG+ E+ +L EIK+AYKQLARKYHPDVSP  R EEYT+RFIRVQE
Sbjct: 65  AR--KEV---SFYELLGIPETGTLPEIKQAYKQLARKYHPDVSPPDRVEEYTQRFIRVQE 124

Query: 126 AYETLSDPRRRALYDRDMVGGLQVAFSAWRLYDADQEAPEKSGWRSCWQSQISELKRRSM 185
           AYETLSDPRRRA YDRD+  G+ +AFSA R Y  D+E  E+S W++ WQSQ+SELKRRSM
Sbjct: 125 AYETLSDPRRRASYDRDLALGIHLAFSARRRYQYDEELEERSEWKNRWQSQLSELKRRSM 184

Query: 186 NKDSSQNMSWGARMRRQMNE 206
           N+D+  NMSWGARMRRQ +E
Sbjct: 185 NRDARGNMSWGARMRRQRDE 184

[Close]
BLAST of Cp4.1LG03g18080 vs. TrEMBL
Match: B9RWC0_RICCO (Chaperone protein dnaJ 20, chloroplast, putative OS=Ricinus communis GN=RCOM_1017840 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 3.3e-47
Identity = 106/199 (53.27%), Postives = 133/199 (66.83%), Query Frame = 1 

Query: 4   MQCSDFTFSGSDSRFYIPSSPSITGRRPITGHRSGIFFPNTLPCNLMRLPSLSIRAKASF 63
           M C++    G     Y     S +   PIT  + G F     P  + R P  S + KA+ 
Sbjct: 1   MHCTNLMLPGGSDTVYFFHPSSSSSTTPITKSKPGPFL-RLKP--VTRFPMSSFKTKAAV 60

Query: 64  NEGTVSSEVADGSFYDLLGVSESVSLAEIKRAYKQLARKYHPDVSPIGRAEEYTKRFIRV 123
           ++   + ++   SFY+LLG+ ES SL +IK+AYKQLARKYHPDVSP  R  EYT+RFI+V
Sbjct: 61  SDRIATKDL---SFYELLGIPESGSLIDIKQAYKQLARKYHPDVSPPDRVHEYTQRFIQV 120

Query: 124 QEAYETLSDPRRRALYDRDMVGGLQVAFSAWRLYDADQEAPEKSGWRSCWQSQISELKRR 183
           QEAYETLSDPRRRA YDRDM  GL +AFSA R Y +D+E    S W++ W++Q+SELKRR
Sbjct: 121 QEAYETLSDPRRRATYDRDMARGLHLAFSARRRYQSDEEVEVSSDWKNRWEAQLSELKRR 180

Query: 184 SMNKDSSQNMSWGARMRRQ 203
           SMNKDS +NMSW ARMRRQ
Sbjct: 181 SMNKDSEENMSWAARMRRQ 193

[Close]
BLAST of Cp4.1LG03g18080 vs. TrEMBL
Match: A0A059B1U7_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H02689 PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 5.7e-47
Identity = 111/207 (53.62%), Postives = 135/207 (65.22%), Query Frame = 1 

Query: 4   MQCSDFTFSGSD-SRFYIPSSPSITGRRPITGHRSGIFFPNTLPCNLMRLPSLSIRAKAS 63
           M+C      G D SR  +P  P         GHR+  F P  +    +R       A   
Sbjct: 1   MRCYGVALPGGDPSRLCLPPPPPPFPSARTHGHRA--FLPTRVRFGAVRC------AAGR 60

Query: 64  FNEGTVSS----EVADGSFYDLLGVSESVSLAEIKRAYKQLARKYHPDVSPIGRAEEYTK 123
            ++G V+       A+ SFYDLLG+ ES +L EIK+AYKQLARKYHPDVSP GR EEYT+
Sbjct: 61  IDDGAVADAARCSAAEASFYDLLGIPESGTLPEIKQAYKQLARKYHPDVSPPGRVEEYTQ 120

Query: 124 RFIRVQEAYETLSDPRRRALYDRDMVGGLQVAFSAWRLYDADQEAPEKSGWRSCWQSQIS 183
           RFIRVQEAYETLSDPRRRA+YDRD+  G+ +AFSA R Y  D++  +KS W+S WQ Q+S
Sbjct: 121 RFIRVQEAYETLSDPRRRAVYDRDLARGIHLAFSARRPYRGDEDLEDKSEWKSRWQVQLS 180

Query: 184 ELKRRSMNKDSSQNMSWGARMRRQMNE 206
            LKRRS +KDS  NMSWGARMR+QM E
Sbjct: 181 GLKRRSAHKDSRGNMSWGARMRKQMEE 199

[Close]
BLAST of Cp4.1LG03g18080 vs. TAIR10
Match: AT4G13830.2 (AT4G13830.2 DNAJ-like 20)

HSP 1 Score: 169.1 bits (427), Expect = 2.9e-42
Identity = 97/170 (57.06%), Postives = 118/170 (69.41%), Query Frame = 1 

Query: 42  PNTLPCNLM-----RLPSLSIRAKASFNEGTVSSEVADGSFYDLLGVSESVSLAEIKRAY 101
           P ++P  +      R  S  I+++ + ++    SE  D SFYDLLGV+ESV+L EIK+AY
Sbjct: 29  PTSIPTTISYPTRTRFSSTRIQSRLTHDDPVKQSE--DLSFYDLLGVTESVTLPEIKQAY 88

Query: 102 KQLARKYHPDVSPIGRAEEYTKRFIRVQEAYETLSDPRRRALYDRDMVGGLQVAFSAWRL 161
           KQLARKYHPDVSP  R EEYT RFIRVQEAYETLSDPRRR LYDRD+  G   +FS  R 
Sbjct: 89  KQLARKYHPDVSPPDRVEEYTDRFIRVQEAYETLSDPRRRVLYDRDLSMGFSFSFSGRRQ 148

Query: 162 YDADQE-APEKSGWRSCWQSQISELKRRSMNKDSSQNMSWGARMRRQMNE 206
              DQE   EKS W++ WQ+Q+S L+RRS  KD++  MSW ARMRRQ  E
Sbjct: 149 NRYDQEVVEEKSEWKAKWQTQLSGLRRRSNQKDNN-TMSWAARMRRQQQE 195

[Close]
BLAST of Cp4.1LG03g18080 vs. TAIR10
Match: AT2G22360.1 (AT2G22360.1 DNAJ heat shock family protein)

HSP 1 Score: 73.9 bits (180), Expect = 1.3e-13
Identity = 46/115 (40.00%), Postives = 66/115 (57.39%), Query Frame = 1 

Query: 36  RSGIFFPNTLPCNLMRLPSLSIRAKASFNEGTVSSEVADGSFYDLLGVSESVSLAEIKRA 95
           +S +F   +LP   M   S ++      +  TV    AD  +Y +LGVS++ + AEIK A
Sbjct: 49  KSSMFSHGSLPFLSMTGMSRNMHPPRRGSRFTVR---ADADYYSVLGVSKNATKAEIKSA 108

Query: 96  YKQLARKYHPDVSPIGRAEEYTKRFIRVQEAYETLSDPRRRALYDRDMVGGLQVA 151
           Y++LAR YHPDV+    AEE   +F  +  AYE LSD  +++LYDR    GL+ A
Sbjct: 109 YRKLARNYHPDVNKDPGAEE---KFKEISNAYEVLSDDEKKSLYDRYGEAGLKGA 157

[Close]
BLAST of Cp4.1LG03g18080 vs. TAIR10
Match: AT4G39960.1 (AT4G39960.1 Molecular chaperone Hsp40/DnaJ family protein)

HSP 1 Score: 73.9 bits (180), Expect = 1.3e-13
Identity = 45/115 (39.13%), Postives = 63/115 (54.78%), Query Frame = 1 

Query: 36  RSGIFFPNTLPCNLMRLPSLSIRAKASFNEGTVSSEVADGSFYDLLGVSESVSLAEIKRA 95
           RS +F   +LP     L    +        G   +  AD  FY +LGVS++ + AEIK A
Sbjct: 49  RSSMFAQGSLPF----LSLTGVSPNTHSRRGARFTVRADTDFYSVLGVSKNATKAEIKSA 108

Query: 96  YKQLARKYHPDVSPIGRAEEYTKRFIRVQEAYETLSDPRRRALYDRDMVGGLQVA 151
           Y++LAR YHPDV+    AE+   +F  +  AYE LSD  +R+LYDR    G++ A
Sbjct: 109 YRKLARSYHPDVNKDAGAED---KFKEISNAYEILSDDEKRSLYDRYGEAGVKGA 156

[Close]
BLAST of Cp4.1LG03g18080 vs. TAIR10
Match: AT1G80030.1 (AT1G80030.1 Molecular chaperone Hsp40/DnaJ family protein)

HSP 1 Score: 65.9 bits (159), Expect = 3.4e-11
Identity = 33/67 (49.25%), Postives = 47/67 (70.15%), Query Frame = 1 

Query: 75  GSFYDLLGVSESVSLAEIKRAYKQLARKYHPDVSPIGRAEEYTKRFIRVQEAYETLSDPR 134
           G +Y  LGVS+S +  EIK AY++LAR+YHPDV+   +    T++F  +  AYE LSD +
Sbjct: 74  GDYYATLGVSKSANNKEIKAAYRRLARQYHPDVN---KEPGATEKFKEISAAYEVLSDEQ 133

Query: 135 RRALYDR 142
           +RALYD+
Sbjct: 134 KRALYDQ 137

[Close]
BLAST of Cp4.1LG03g18080 vs. TAIR10
Match: AT4G37480.1 (AT4G37480.1 Chaperone DnaJ-domain superfamily protein)

HSP 1 Score: 64.7 bits (156), Expect = 7.6e-11
Identity = 35/87 (40.23%), Postives = 56/87 (64.37%), Query Frame = 1 

Query: 55  LSIRAKASFNEGTVSSEVADGSFYDLLGVSESVSLAEIKRAYKQLARKYHPDVSPIGRAE 114
           LS  A+++ NE  V +       YD+L VSE+ S+AEIK ++++LA++ HPD+    +  
Sbjct: 41  LSGEAESNRNEFPVENA------YDILNVSETSSIAEIKASFRRLAKETHPDLIESKKDP 100

Query: 115 EYTKRFIRVQEAYETLSDPRRRALYDR 142
             ++RF+++  AYE LSD  +RA YDR
Sbjct: 101 SNSRRFVQILAAYEILSDSEKRAHYDR 121

[Close]
BLAST of Cp4.1LG03g18080 vs. NCBI nr
Match: gi|659075782|ref|XP_008438327.1| (PREDICTED: chaperone protein dnaJ 20, chloroplastic-like [Cucumis melo])

HSP 1 Score: 334.7 bits (857), Expect = 1.1e-88
Identity = 169/204 (82.84%), Postives = 184/204 (90.20%), Query Frame = 1 

Query: 3   EMQCSDFTFSGSDSRFYIPSSPSITGRRPITGHRSGIFFPNTLPCNLMRLPSLSIRAKAS 62
           EMQCSDFTFSGSDSRFYIPS+P+I+ RRPI+G+RS +FFP+T P N  RLPSLSIRAKAS
Sbjct: 26  EMQCSDFTFSGSDSRFYIPSNPTISARRPISGYRSRVFFPHTPPFNSTRLPSLSIRAKAS 85

Query: 63  FNEGTVSSEVADGSFYDLLGVSESVSLAEIKRAYKQLARKYHPDVSPIGRAEEYTKRFIR 122
           FNEG VSSEVA+GSFYDLLG+S+S SLAEIKRAYKQLARKYHPDVSP G AEEYTK FIR
Sbjct: 86  FNEGFVSSEVAEGSFYDLLGISQSGSLAEIKRAYKQLARKYHPDVSPPGGAEEYTKMFIR 145

Query: 123 VQEAYETLSDPRRRALYDRDMVGGLQVAFSAWRLYDADQEAPEKSGWRSCWQSQISELKR 182
           VQEAYETLSDPRRRALYDRDM+GGLQVAFSA R YDA +E  EKSGWR+ W++QISELKR
Sbjct: 146 VQEAYETLSDPRRRALYDRDMIGGLQVAFSARRRYDAAEEVAEKSGWRNSWEAQISELKR 205

Query: 183 RSMNKDSSQNMSWGARMRRQMNEQ 207
           RSM KD  QNMSWGARMRRQMNEQ
Sbjct: 206 RSMEKDLRQNMSWGARMRRQMNEQ 229

[Close]
BLAST of Cp4.1LG03g18080 vs. NCBI nr
Match: gi|449432390|ref|XP_004133982.1| (PREDICTED: chaperone protein dnaJ 20, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 322.0 bits (824), Expect = 7.5e-85
Identity = 163/204 (79.90%), Postives = 179/204 (87.75%), Query Frame = 1 

Query: 3   EMQCSDFTFSGSDSRFYIPSSPSITGRRPITGHRSGIFFPNTLPCNLMRLPSLSIRAKAS 62
           EMQCSD TFSGSDSRFYIPS+P+ T RRPI+G+RS + FP+T P N  RLPSLSIRAKAS
Sbjct: 13  EMQCSDLTFSGSDSRFYIPSNPTTTARRPISGYRSRVCFPHTPPFNSTRLPSLSIRAKAS 72

Query: 63  FNEGTVSSEVADGSFYDLLGVSESVSLAEIKRAYKQLARKYHPDVSPIGRAEEYTKRFIR 122
           FNEG VSSEVA+GSFYDLLG+S+S SL EIKRAYKQLARKYHPDVSP G  EE TKRFIR
Sbjct: 73  FNEGFVSSEVAEGSFYDLLGISKSGSLEEIKRAYKQLARKYHPDVSPPGCVEENTKRFIR 132

Query: 123 VQEAYETLSDPRRRALYDRDMVGGLQVAFSAWRLYDADQEAPEKSGWRSCWQSQISELKR 182
           VQEAYETL+DPRRRALYDRDM+GGLQVAFSA R YDAD+E  +KSGWR+ W++QISELKR
Sbjct: 133 VQEAYETLADPRRRALYDRDMIGGLQVAFSARRRYDADEEVAQKSGWRNSWEAQISELKR 192

Query: 183 RSMNKDSSQNMSWGARMRRQMNEQ 207
           RSM KD   NMSWGARMRRQMNEQ
Sbjct: 193 RSMEKDLRPNMSWGARMRRQMNEQ 216

[Close]
BLAST of Cp4.1LG03g18080 vs. NCBI nr
Match: gi|703148387|ref|XP_010109333.1| (Chaperone protein dnaJ 20 [Morus notabilis])

HSP 1 Score: 210.7 bits (535), Expect = 2.4e-51
Identity = 119/205 (58.05%), Postives = 141/205 (68.78%), Query Frame = 1 

Query: 4   MQCSDFTFSG-SDSRFYIPSSPSITGRRPITGHRSGIFFPNTLPCNLMRLPSLSIRA--K 63
           M+C+    SG SDSRF+ P++ S           S + FP         + S  IRA  +
Sbjct: 1   MRCNGLAISGGSDSRFFFPTNSSTIYTASARNPSSTVLFPGR------PVFSTRIRATPR 60

Query: 64  ASFNEGTVSSEVADGSFYDLLGVSESVSLAEIKRAYKQLARKYHPDVSPIGRAEEYTKRF 123
           AS     V   VA+ SFY+LLG+ ES SL EIK+AYKQLARKYHPDVSP GR EEYT+ F
Sbjct: 61  ASAAAAVVGDRVAELSFYELLGIPESGSLGEIKQAYKQLARKYHPDVSPPGRVEEYTRTF 120

Query: 124 IRVQEAYETLSDPRRRALYDRDMVGGLQVAFSAWRLYDADQEAPEKSGWRSCWQSQISEL 183
           IRVQEAYETLSDPR RA+YDRDM  GL +AFSA R Y +D+   EKS W+S WQSQ+SEL
Sbjct: 121 IRVQEAYETLSDPRLRAIYDRDMAKGLHLAFSARRRYQSDEGMEEKSEWKSHWQSQLSEL 180

Query: 184 KRRSMNKDSSQNMSWGARMRRQMNE 206
           KRRS+NKDS  NMSWGARMRR+M +
Sbjct: 181 KRRSVNKDSRGNMSWGARMRRRMED 199

[Close]
BLAST of Cp4.1LG03g18080 vs. NCBI nr
Match: gi|1009139653|ref|XP_015887231.1| (PREDICTED: chaperone protein dnaJ 20, chloroplastic [Ziziphus jujuba])

HSP 1 Score: 206.5 bits (524), Expect = 4.6e-50
Identity = 118/212 (55.66%), Postives = 142/212 (66.98%), Query Frame = 1 

Query: 4   MQCSDFTFSGSDSRFYI----PSSPSITGRR------PITGHRSGIFFPNTLPCNLMRLP 63
           M+    T SGSDSRF+     P + SI          P   HR  IF   T   ++    
Sbjct: 1   MRSHGLTISGSDSRFFSFPVKPVNKSIPDPNHNVLFFPAHHHRPIIFTTTTTRDSIG--- 60

Query: 64  SLSIRAKASFNEGTVSSEVADGSFYDLLGVSESVSLAEIKRAYKQLARKYHPDVSPIGRA 123
             ++R KA+ N+G V SE A+ SFY+LLG+ E  SL +IK+AYKQLARKYHPDVSP GR 
Sbjct: 61  --TVRVKATVNDGFVFSEAAELSFYELLGIPEWGSLVDIKQAYKQLARKYHPDVSPPGRV 120

Query: 124 EEYTKRFIRVQEAYETLSDPRRRALYDRDMVGGLQVAFSAWRLYDADQEAPEKSGWRSCW 183
           EEYT+RFIRVQEAYETLSDPRRRALYDRDM  G+ +AFSA + Y  D+   +K  W+  W
Sbjct: 121 EEYTQRFIRVQEAYETLSDPRRRALYDRDMAKGIHLAFSARKRYQKDEGMEDKGEWKYRW 180

Query: 184 QSQISELKRRSMNKDSSQNMSWGARMRRQMNE 206
           QSQ+SELKRRS NKD + NMSWGARMRR+  E
Sbjct: 181 QSQLSELKRRSTNKDMTGNMSWGARMRRRREE 207

[Close]
BLAST of Cp4.1LG03g18080 vs. NCBI nr
Match: gi|502184163|ref|XP_004517297.1| (PREDICTED: chaperone protein dnaJ 20, chloroplastic [Cicer arietinum])

HSP 1 Score: 203.0 bits (515), Expect = 5.1e-49
Identity = 110/204 (53.92%), Postives = 142/204 (69.61%), Query Frame = 1 

Query: 4   MQCSDFTFSGSDSRFYIPSSPSITGRRPITGHRSGIFFPNTLPCNLMRLPSLSIRAKASF 63
           M+C   T  GSD+RF++PS   ++            F P T P   +       +AK++F
Sbjct: 1   MRCYGLTIPGSDNRFFLPSLTPVS------------FRPTTRPVTRISFT----KAKSTF 60

Query: 64  NEGTVSSEVADGSFYDLLGVSESVSLAEIKRAYKQLARKYHPDVSPIGRAEEYTKRFIRV 123
           N+G V+ E+   SFYDLLG+ E+ SL +IK AYKQLARKYHPDVSP GR EEYTKRFI+V
Sbjct: 61  NDGVVAEEL---SFYDLLGIPETGSLMDIKHAYKQLARKYHPDVSPPGRVEEYTKRFIQV 120

Query: 124 QEAYETLSDPRRRALYDRDMVGGLQVAFSAWRLYDADQEAPEKSG-WRSCWQSQISELKR 183
           QEAYETLSDP RR +YD DM  G+ +AFSA + Y+   +A E+ G W+S WQSQ+S+LKR
Sbjct: 121 QEAYETLSDPSRRIMYDTDMARGVHLAFSARKRYNLSHQASEQKGEWKSRWQSQLSDLKR 180

Query: 184 RSMNKDSSQNMSWGARMRRQMNEQ 207
           RS +KD++ NMSWGARMR+Q +EQ
Sbjct: 181 RSKSKDAAGNMSWGARMRQQRDEQ 185

The following BLAST results are available for this feature:
BLAST of Cp4.1LG03g18080 vs. Swiss-Prot
Match NameE-valueIdentityDescription
DNJ20_ARATH5.1e-4157.06Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis thaliana GN=ATJ20 PE=1 S... [more]
DNAJ_LACF31.3e-1251.95Chaperone protein DnaJ OS=Lactobacillus fermentum (strain NBRC 3956 / LMG 18251)... [more]
DNAJ_LACRD1.3e-1250.63Chaperone protein DnaJ OS=Lactobacillus reuteri (strain DSM 20016) GN=dnaJ PE=3 ... [more]
DNAJ_LACRJ1.3e-1250.63Chaperone protein DnaJ OS=Lactobacillus reuteri (strain JCM 1112) GN=dnaJ PE=3 S... [more]
DNAJ_STRA11.7e-1247.44Chaperone protein DnaJ OS=Streptococcus agalactiae serotype Ia (strain ATCC 2759... [more]
BLAST of Cp4.1LG03g18080 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L4L9_CUCSA5.2e-8579.90Chaperone protein dnaJ 20, chloroplast OS=Cucumis sativus GN=Csa_3G129700 PE=4 S... [more]
W9S291_9ROSA1.7e-5158.05Chaperone protein dnaJ 20 OS=Morus notabilis GN=L484_011075 PE=4 SV=1[more]
A0A061EJK6_THECC1.5e-4755.00Chaperone protein dnaJ 20 OS=Theobroma cacao GN=TCM_020242 PE=4 SV=1[more]
B9RWC0_RICCO3.3e-4753.27Chaperone protein dnaJ 20, chloroplast, putative OS=Ricinus communis GN=RCOM_101... [more]
A0A059B1U7_EUCGR5.7e-4753.62Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H02689 PE=4 SV=1[more]
BLAST of Cp4.1LG03g18080 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G13830.22.9e-4257.06 DNAJ-like 20[more]
AT2G22360.11.3e-1340.00 DNAJ heat shock family protein[more]
AT4G39960.11.3e-1339.13 Molecular chaperone Hsp40/DnaJ family protein[more]
AT1G80030.13.4e-1149.25 Molecular chaperone Hsp40/DnaJ family protein[more]
AT4G37480.17.6e-1140.23 Chaperone DnaJ-domain superfamily protein[more]
BLAST of Cp4.1LG03g18080 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659075782|ref|XP_008438327.1|1.1e-8882.84PREDICTED: chaperone protein dnaJ 20, chloroplastic-like [Cucumis melo][more]
gi|449432390|ref|XP_004133982.1|7.5e-8579.90PREDICTED: chaperone protein dnaJ 20, chloroplastic-like [Cucumis sativus][more]
gi|703148387|ref|XP_010109333.1|2.4e-5158.05Chaperone protein dnaJ 20 [Morus notabilis][more]
gi|1009139653|ref|XP_015887231.1|4.6e-5055.66PREDICTED: chaperone protein dnaJ 20, chloroplastic [Ziziphus jujuba][more]
gi|502184163|ref|XP_004517297.1|5.1e-4953.92PREDICTED: chaperone protein dnaJ 20, chloroplastic [Cicer arietinum][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR018253DnaJ_domain_CS
IPR001623DnaJ_domain
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0044237 cellular metabolic process
biological_process GO:0071704 organic substance metabolic process
biological_process GO:0044238 primary metabolic process
biological_process GO:0019222 regulation of metabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0043231 intracellular membrane-bounded organelle
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG03g18080.1Cp4.1LG03g18080.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001623DnaJ domainPRINTSPR00625JDOMAINcoord: 96..111
score: 2.2E-15coord: 78..96
score: 2.2E-15coord: 115..135
score: 2.2
IPR001623DnaJ domainGENE3DG3DSA:1.10.287.110coord: 69..148
score: 2.4
IPR001623DnaJ domainPFAMPF00226DnaJcoord: 77..140
score: 2.9
IPR001623DnaJ domainSMARTSM00271dnaj_3coord: 75..135
score: 3.2
IPR001623DnaJ domainPROFILEPS50076DNAJ_2coord: 76..143
score: 20
IPR001623DnaJ domainunknownSSF46565Chaperone J-domaincoord: 76..149
score: 2.75
IPR018253DnaJ domain, conserved sitePROSITEPS00636DNAJ_1coord: 120..139
scor
NoneNo IPR availablePANTHERPTHR24078DNAJ HOMOLOG SUBFAMILY C MEMBERcoord: 77..141
score: 1.7
NoneNo IPR availablePANTHERPTHR24078:SF222SUBFAMILY NOT NAMEDcoord: 77..141
score: 1.7

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG03g18080Cucsa.256640Cucumber (Gy14) v1cgycpeB0682
Cp4.1LG03g18080CmaCh14G019070Cucurbita maxima (Rimu)cmacpeB283
Cp4.1LG03g18080CmaCh06G012000Cucurbita maxima (Rimu)cmacpeB837
Cp4.1LG03g18080CmoCh06G012370Cucurbita moschata (Rifu)cmocpeB787
Cp4.1LG03g18080CmoCh14G019620Cucurbita moschata (Rifu)cmocpeB245
Cp4.1LG03g18080Cla021401Watermelon (97103) v1cpewmB613
Cp4.1LG03g18080Csa3G129700Cucumber (Chinese Long) v2cpecuB609
Cp4.1LG03g18080MELO3C006295Melon (DHL92) v3.5.1cpemeB585
Cp4.1LG03g18080ClCG05G003140Watermelon (Charleston Gray)cpewcgB559
Cp4.1LG03g18080CSPI03G10650Wild cucumber (PI 183967)cpecpiB611
Cp4.1LG03g18080Lsi05G018600Bottle gourd (USVL1VR-Ls)cpelsiB506
Cp4.1LG03g18080MELO3C006295.2Melon (DHL92) v3.6.1cpemedB693
Cp4.1LG03g18080CsaV3_3G010760Cucumber (Chinese Long) v3cpecucB0759
Cp4.1LG03g18080Bhi01G000145Wax gourdcpewgoB0784
Cp4.1LG03g18080CsGy3G010700Cucumber (Gy14) v2cgybcpeB406
Cp4.1LG03g18080Carg10152Silver-seed gourdcarcpeB0327
Cp4.1LG03g18080Carg06307Silver-seed gourdcarcpeB1331
Cp4.1LG03g18080Carg11046Silver-seed gourdcarcpeB1504
Cp4.1LG03g18080Carg24775Silver-seed gourdcarcpeB0250
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG03g18080Cp4.1LG12g00650Cucurbita pepo (Zucchini)cpecpeB184
Cp4.1LG03g18080Cp4.1LG17g02940Cucurbita pepo (Zucchini)cpecpeB333
Cp4.1LG03g18080Cp4.1LG08g02660Cucurbita pepo (Zucchini)cpecpeB482
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG03g18080Wax gourdcpewgoB0765
Cp4.1LG03g18080Cucurbita maxima (Rimu)cmacpeB402
Cp4.1LG03g18080Cucurbita moschata (Rifu)cmocpeB364
Cp4.1LG03g18080Bottle gourd (USVL1VR-Ls)cpelsiB484
Cp4.1LG03g18080Watermelon (Charleston Gray)cpewcgB561
Cp4.1LG03g18080Watermelon (97103) v1cpewmB622
Cp4.1LG03g18080Melon (DHL92) v3.5.1cpemeB578