Carg10152 (gene) Silver-seed gourd

Overview
NameCarg10152
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionChaperone protein DnaJ
LocationCucurbita_argyrosperma_scaffold_039 : 755278 .. 756962 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGTAGCTGCGGTTTGGCTTTATCAGGTACCGATTCACGGTGCTATTTACCGGCGATGCCTCCGATATTTTCTCCGATGAGAGCCTGTCCACCGGAAGGAAATTCGCAGGTTTTGTTCCCTAAATTGACACGGCCTCCTTCTGCTTGCGTTAGAGCAAAGGCCACGGTTGTCAACGAGGCGCTAGTCTCCGACGCCGTCGAGATAAGCTTCTACGAGCTTTTAGGAGTGCCGGAGTCGGGGTCGATGGTGGAGATTAAGCAGGCCTACAAGCAGATGGCTCGGAAATACCATCCGGACGTCTCGCCACCGGACCGGATCGAGGAGTATACAAGGAAGTTCATCAAGGTTCAGGAGGCGTACGAGACGTTATCGGATCCTGTTATGAGAGATTTGTATGATAGAGACATGGCGAGAGGTCTTCACCTTGCTTTCTCTGCTCGAAGACGGGGCTACAACCATGAGGTATGTTTTTTGGCCATTTTTGAGGTCAAAATCGGTTGCTGAATCAATTAGGATGTCTTCTCTACCTTAATTTATTGCAATTTAAATCATTATATTGAATTGATTTTTACTCGTCTTGAACAATTTCGCCTCCTCATCCTGAATGCTTGTTATTTTCCCTGACCTCTTCGTTTTTGCAACCTAGATTACTCCATGCACTCAGTCTGGTGTTTCATCTGTTTTTTTAATTTTCTGTCTTCGATTTAACAGTAGATGATGATTATAATCTGGACCACAGGTATATTCTCGATATGCAAATACTTTTTGAGTTTTTTTTACTAAAACAGTAGATTAACCATTAGCAACAGCTCTTCTAATTCTTCGACTATCTTCTAATTAAGCTAATCCTAATTCAAAAGACTTGTGTGCATCGAAACATGTATAATCTGGACCAAATCATGACTCCTACCTATATAACTTACATGACAGATATCGATTCTTTTAGTTTCATTATCAAAATTTCCTATATTAAATCTGTACTTATAATTCTCTGAATTGCTCAGGAAATGGATGAGAAAGGTGGGTGGAAGAGCCGTTGGCAGGATCAGCTATCAGAATTAAAGAGAAGAAGCATGAATAAAAATTCAAGAGCAAACATGTCATGGGGAGCTCGAATGCGCAGTCAAAGGGACGAGCTTCACAACGACGAAAACCCGTAATTTGGTTTTTCCCCTGCTCTGAACTTTCAACCTTCCTGCATATAGCTAATATTAATACTCTAGCTAGATACAGGACCTTAGCCTACTGATTACTAGAACTTCTACTTGTTGCTCTGTGAAACTCAAATTGCTTAGAGTCTGCATATTGGGAACTTGTTTCACAACGCATGTAAATCACTAGAAAACCAGCATCGAATGTGTGTGTGTATATATATATATATATATGGAAATTATAGTATCTCAGAGTAATCTATCAATGTTGAATTCATCGTTCCTGATTAGTCCTGGTAGATACCAATTTTGTTTCAGAATGTCTACTGTGCTTTTCTAAAATCACAGTCTTTGTTACCAATATTTTCTCTGTTTCCGTTCCACTAAAACCACTGTTAGAACATGATTCAGCTTTTTGTGTTTAGGTTTTAAAAAAGTTGCTAGGAGCCAAAAAACAAGTTGAAGAAAAAAACAAACTCATCTTTTGGAGTGCCACCATTAATGCAGATTACCATCCTTGTGATCAATAAT

mRNA sequence

ATGCGTAGCTGCGGTTTGGCTTTATCAGGTACCGATTCACGGTGCTATTTACCGGCGATGCCTCCGATATTTTCTCCGATGAGAGCCTGTCCACCGGAAGGAAATTCGCAGGTTTTGTTCCCTAAATTGACACGGCCTCCTTCTGCTTGCGTTAGAGCAAAGGCCACGGTTGTCAACGAGGCGCTAGTCTCCGACGCCGTCGAGATAAGCTTCTACGAGCTTTTAGGAGTGCCGGAGTCGGGGTCGATGGTGGAGATTAAGCAGGCCTACAAGCAGATGGCTCGGAAATACCATCCGGACGTCTCGCCACCGGACCGGATCGAGGAGTATACAAGGAAGTTCATCAAGGTTCAGGAGGCGTACGAGACGTTATCGGATCCTGTTATGAGAGATTTGTATGATAGAGACATGGCGAGAGGTCTTCACCTTGCTTTCTCTGCTCGAAGACGGGGCTACAACCATGAGGAAATGGATGAGAAAGGTGGGTGGAAGAGCCGTTGGCAGGATCAGCTATCAGAATTAAAGAGAAGAAGCATGAATAAAAATTCAAGAGCAAACATGTCATGGGGAGCTCGAATGCGCAGTCAAAGGGACGAGCTTCACAACGACGAAAACCCGTAATTTGGTTTTTCCCCTGCTCTGAACTTTCAACCTTCCTGCATATAGCTAATATTAATACTCTAGCTAGATACAGGACCTTAGCCTACTGATTACTAGAACTTCTACTTGTTGCTCTGTGAAACTCAAATTGCTTAGAGTCTGCATATTGGGAACTTGTTTCACAACGCATGTAAATCACTAGAAAACCAGCATCGAATGTGTGTGTGTATATATATATATATATATGGAAATTATAGTATCTCAGAGTAATCTATCAATGTTGAATTCATCGTTCCTGATTAGTCCTGGTAGATACCAATTTTGTTTCAGAATGTCTACTGTGCTTTTCTAAAATCACAGTCTTTGTTACCAATATTTTCTCTGTTTCCGTTCCACTAAAACCACTGTTAGAACATGATTCAGCTTTTTGTGTTTAGGTTTTAAAAAAGTTGCTAGGAGCCAAAAAACAAGTTGAAGAAAAAAACAAACTCATCTTTTGGAGTGCCACCATTAATGCAGATTACCATCCTTGTGATCAATAAT

Coding sequence (CDS)

ATGCGTAGCTGCGGTTTGGCTTTATCAGGTACCGATTCACGGTGCTATTTACCGGCGATGCCTCCGATATTTTCTCCGATGAGAGCCTGTCCACCGGAAGGAAATTCGCAGGTTTTGTTCCCTAAATTGACACGGCCTCCTTCTGCTTGCGTTAGAGCAAAGGCCACGGTTGTCAACGAGGCGCTAGTCTCCGACGCCGTCGAGATAAGCTTCTACGAGCTTTTAGGAGTGCCGGAGTCGGGGTCGATGGTGGAGATTAAGCAGGCCTACAAGCAGATGGCTCGGAAATACCATCCGGACGTCTCGCCACCGGACCGGATCGAGGAGTATACAAGGAAGTTCATCAAGGTTCAGGAGGCGTACGAGACGTTATCGGATCCTGTTATGAGAGATTTGTATGATAGAGACATGGCGAGAGGTCTTCACCTTGCTTTCTCTGCTCGAAGACGGGGCTACAACCATGAGGAAATGGATGAGAAAGGTGGGTGGAAGAGCCGTTGGCAGGATCAGCTATCAGAATTAAAGAGAAGAAGCATGAATAAAAATTCAAGAGCAAACATGTCATGGGGAGCTCGAATGCGCAGTCAAAGGGACGAGCTTCACAACGACGAAAACCCGTAA

Protein sequence

MRSCGLALSGTDSRCYLPAMPPIFSPMRACPPEGNSQVLFPKLTRPPSACVRAKATVVNEALVSDAVEISFYELLGVPESGSMVEIKQAYKQMARKYHPDVSPPDRIEEYTRKFIKVQEAYETLSDPVMRDLYDRDMARGLHLAFSARRRGYNHEEMDEKGGWKSRWQDQLSELKRRSMNKNSRANMSWGARMRSQRDELHNDENP
Homology
[Close]
BLAST of Carg10152 vs. NCBI nr
Match: XP_022959157.1 (chaperone protein dnaJ 20, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 412.5 bits (1059), Expect = 8.2e-112
Identity = 204/206 (99.03%), Postives = 205/206 (99.51%), Query Frame = 0 

Query: 1   MRSCGLALSGTDSRCYLPAMPPIFSPMRACPPEGNSQVLFPKLTRPPSACVRAKATVVNE 60
           MRSCGLALSGTDSRCYLPAMPPIFSPMRACPPEGNSQVLFPKLTRPPSACVRAKATVVNE
Sbjct: 1   MRSCGLALSGTDSRCYLPAMPPIFSPMRACPPEGNSQVLFPKLTRPPSACVRAKATVVNE 60

Query: 61  ALVSDAVEISFYELLGVPESGSMVEIKQAYKQMARKYHPDVSPPDRIEEYTRKFIKVQEA 120
           ALVSDAVEISFYELLGVPESGSMVEIKQAYKQMARKYHPDVSPPDRIEEYTRKFIKVQEA
Sbjct: 61  ALVSDAVEISFYELLGVPESGSMVEIKQAYKQMARKYHPDVSPPDRIEEYTRKFIKVQEA 120

Query: 121 YETLSDPVMRDLYDRDMARGLHLAFSARRRGYNHEEMDEKGGWKSRWQDQLSELKRRSMN 180
           YETLSDPVMRDLYDRDMARGLHLAFSARRRGYNHEEMDEKGGWKSRWQDQLSELKRRSMN
Sbjct: 121 YETLSDPVMRDLYDRDMARGLHLAFSARRRGYNHEEMDEKGGWKSRWQDQLSELKRRSMN 180

Query: 181 KNSRANMSWGARMRSQRDELHNDENP 207
           KNSRANMSWGARMR QRDELHND+NP
Sbjct: 181 KNSRANMSWGARMRRQRDELHNDDNP 206

[Close]
BLAST of Carg10152 vs. NCBI nr
Match: XP_023549024.1 (chaperone protein dnaJ 20, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 403.3 bits (1035), Expect = 5.0e-109
Identity = 199/205 (97.07%), Postives = 204/205 (99.51%), Query Frame = 0 

Query: 1   MRSCGLALSGTDSRCYLPAMPPIFSPMRACPPEGNSQVLFPKLTRPPSACVRAKATVVNE 60
           MRSCGLALSGTDSRCYLPAMPPIFSPMRACPPEGNSQVLFPKLTRPPSACVRAKATVVNE
Sbjct: 1   MRSCGLALSGTDSRCYLPAMPPIFSPMRACPPEGNSQVLFPKLTRPPSACVRAKATVVNE 60

Query: 61  ALVSDAVEISFYELLGVPESGSMVEIKQAYKQMARKYHPDVSPPDRIEEYTRKFIKVQEA 120
           ALVSDAVEISFYELLGVPESGSMVEIKQAYKQMARKYHPDVSPPDRIEEYTRKFIKVQEA
Sbjct: 61  ALVSDAVEISFYELLGVPESGSMVEIKQAYKQMARKYHPDVSPPDRIEEYTRKFIKVQEA 120

Query: 121 YETLSDPVMRDLYDRDMARGLHLAFSARRRGYNHEEMDEKGGWKSRWQDQLSELKRRSMN 180
           YETLSDPVMRDLYDRDMARGLHLAFSARRRGYNHEEM+EKGGWK+RWQDQLSELKRRSMN
Sbjct: 121 YETLSDPVMRDLYDRDMARGLHLAFSARRRGYNHEEMEEKGGWKNRWQDQLSELKRRSMN 180

Query: 181 KNSRANMSWGARMRSQRDELHNDEN 206
           KNSRANMSWGARMR QRDELH+D++
Sbjct: 181 KNSRANMSWGARMRRQRDELHDDDD 205

[Close]
BLAST of Carg10152 vs. NCBI nr
Match: XP_023006292.1 (chaperone protein dnaJ 20, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 397.1 bits (1019), Expect = 3.6e-107
Identity = 196/206 (95.15%), Postives = 201/206 (97.57%), Query Frame = 0 

Query: 1   MRSCGLALSGTDSRCYLPAMPPIFSPMRACPPEGNSQVLFPKLTRPPSACVRAKATVVNE 60
           MRSCGLALSGTDSRCYLPAMPPIFSPMRACP +GNSQVLFPKLTRPPSACVRAKATVV E
Sbjct: 1   MRSCGLALSGTDSRCYLPAMPPIFSPMRACPLDGNSQVLFPKLTRPPSACVRAKATVVKE 60

Query: 61  ALVSDAVEISFYELLGVPESGSMVEIKQAYKQMARKYHPDVSPPDRIEEYTRKFIKVQEA 120
            LVSDA+EISFYELLGVPESGSMVEIKQAYKQMARKYHPDVSPPDRIEEYTRKFIKVQEA
Sbjct: 61  TLVSDAIEISFYELLGVPESGSMVEIKQAYKQMARKYHPDVSPPDRIEEYTRKFIKVQEA 120

Query: 121 YETLSDPVMRDLYDRDMARGLHLAFSARRRGYNHEEMDEKGGWKSRWQDQLSELKRRSMN 180
           YETLSDPVMRDLYDRDMARGLHLAFSARRRGYNHEEM+EKGGWKSRWQDQLSELKRRSMN
Sbjct: 121 YETLSDPVMRDLYDRDMARGLHLAFSARRRGYNHEEMEEKGGWKSRWQDQLSELKRRSMN 180

Query: 181 KNSRANMSWGARMRSQRDELHNDENP 207
           KNSRANMSWGARMR Q DELH+D+NP
Sbjct: 181 KNSRANMSWGARMRRQGDELHDDDNP 206

[Close]
BLAST of Carg10152 vs. NCBI nr
Match: XP_023000441.1 (chaperone protein dnaJ 20, chloroplastic [Cucurbita maxima])

HSP 1 Score: 328.6 bits (841), Expect = 1.6e-86
Identity = 170/205 (82.93%), Postives = 182/205 (88.78%), Query Frame = 0 

Query: 1   MRSCGLALSGTDSRCYLPAMPPIFSPMRACPPEGNSQVLFPKLTRPPSACVRAKATVVNE 60
           MR  GLALSGTDSRC++PAMPPIFSP RA P  GNSQVLFPK TR PS CVRAKA VVNE
Sbjct: 1   MRGYGLALSGTDSRCFVPAMPPIFSPRRASPSVGNSQVLFPKSTRNPSLCVRAKAAVVNE 60

Query: 61  ALVSDAVEISFYELLGVPESGSMVEIKQAYKQMARKYHPDVSPPDRIEEYTRKFIKVQEA 120
           ALVSDAVEISFY+LLG+PESGSM EIKQAYKQMA KYHPDVSPPDRIEEYTRKFIKVQEA
Sbjct: 61  ALVSDAVEISFYDLLGIPESGSMAEIKQAYKQMALKYHPDVSPPDRIEEYTRKFIKVQEA 120

Query: 121 YETLSDPVMRDLYDRDMARGLHLAFSARRRGYNHEEMDEKGGWKSRWQDQLSELKRRSMN 180
           YETLSDP MR LYDRDM  GLHLAFSARRRG N+EEM+ K GWKS WQDQLS L+RRSMN
Sbjct: 121 YETLSDPRMRALYDRDMLGGLHLAFSARRRG-NNEEMEVKSGWKSLWQDQLSGLRRRSMN 180

Query: 181 KNSRANMSWGARMRSQRDELHNDEN 206
           K+S A+MSWGARMR QRDEL++DE+
Sbjct: 181 KDSGASMSWGARMRRQRDELNDDED 204

[Close]
BLAST of Carg10152 vs. NCBI nr
Match: XP_022964372.1 (chaperone protein dnaJ 20, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 322.4 bits (825), Expect = 1.1e-84
Identity = 165/205 (80.49%), Postives = 182/205 (88.78%), Query Frame = 0 

Query: 1   MRSCGLALSGTDSRCYLPAMPPIFSPMRACPPEGNSQVLFPKLTRPPSACVRAKATVVNE 60
           MR  GLALSGTDSRC++PAMP IFSP RA P  GNSQVLFPK TR PS CVRAKA VV+E
Sbjct: 1   MRGYGLALSGTDSRCFVPAMPSIFSPRRASPSVGNSQVLFPKSTRTPSLCVRAKAAVVDE 60

Query: 61  ALVSDAVEISFYELLGVPESGSMVEIKQAYKQMARKYHPDVSPPDRIEEYTRKFIKVQEA 120
           A+VSDAVEISFY+LLG+PESGSM EIKQAYKQ+A KYHPDVSPPDRIEEYTRKFIKVQEA
Sbjct: 61  AVVSDAVEISFYDLLGIPESGSMAEIKQAYKQLALKYHPDVSPPDRIEEYTRKFIKVQEA 120

Query: 121 YETLSDPVMRDLYDRDMARGLHLAFSARRRGYNHEEMDEKGGWKSRWQDQLSELKRRSMN 180
           YETLSDP MR LYDRDM  GLHLAFS+RRRG N+EEM+ K GWKSRWQDQLS L+RRSMN
Sbjct: 121 YETLSDPSMRALYDRDMLGGLHLAFSSRRRG-NNEEMEVKSGWKSRWQDQLSGLRRRSMN 180

Query: 181 KNSRANMSWGARMRSQRDELHNDEN 206
           K+S A+MSWGARMR QRDEL++D++
Sbjct: 181 KDSGASMSWGARMRRQRDELNDDDD 204

[Close]
BLAST of Carg10152 vs. TAIR10
Match: AT4G13830.2 (DNAJ-like 20)

HSP 1 Score: 166.8 bits (421), Expect = 1.4e-41
Identity = 89/163 (54.60%), Postives = 119/163 (73.01%), Query Frame = 0 

Query: 38  VLFPKLTRPPSACVRAKATVVNEALVSDAVEISFYELLGVPESGSMVEIKQAYKQMARKY 97
           + +P  TR  S  ++++ T  ++  V  + ++SFY+LLGV ES ++ EIKQAYKQ+ARKY
Sbjct: 36  ISYPTRTRFSSTRIQSRLT--HDDPVKQSEDLSFYDLLGVTESVTLPEIKQAYKQLARKY 95

Query: 98  HPDVSPPDRIEEYTRKFIKVQEAYETLSDPVMRDLYDRDMARGLHLAFSARRRG-YNHEE 157
           HPDVSPPDR+EEYT +FI+VQEAYETLSDP  R LYDRD++ G   +FS RR+  Y+ E 
Sbjct: 96  HPDVSPPDRVEEYTDRFIRVQEAYETLSDPRRRVLYDRDLSMGFSFSFSGRRQNRYDQEV 155

Query: 158 MDEKGGWKSRWQDQLSELKRRSMNKNSRANMSWGARMRSQRDE 200
           ++EK  WK++WQ QLS L+RRS N+     MSW ARMR Q+ E
Sbjct: 156 VEEKSEWKAKWQTQLSGLRRRS-NQKDNNTMSWAARMRRQQQE 195

[Close]
BLAST of Carg10152 vs. TAIR10
Match: AT3G62600.1 (DNAJ heat shock family protein)

HSP 1 Score: 65.1 bits (157), Expect = 5.8e-11
Identity = 32/72 (44.44%), Postives = 49/72 (68.06%), Query Frame = 0 

Query: 70  SFYELLGVPESGSMVEIKQAYKQMARKYHPDVSPPDRIEEYTRKFIKVQEAYETLSDPVM 129
           S+Y++L VP+  S  +IK+AY+++A KYHPD +  +  EE TRKF ++  AYE LSD   
Sbjct: 26  SYYDVLQVPKGASDEQIKRAYRKLALKYHPDKNQGN--EEATRKFAEINNAYEVLSDEEK 85

Query: 130 RDLYDRDMARGL 142
           R++Y++    GL
Sbjct: 86  REIYNKYGEEGL 95

[Close]
BLAST of Carg10152 vs. TAIR10
Match: AT2G22360.1 (DNAJ heat shock family protein)

HSP 1 Score: 63.5 bits (153), Expect = 1.7e-10
Identity = 32/74 (43.24%), Postives = 45/74 (60.81%), Query Frame = 0 

Query: 68  EISFYELLGVPESGSMVEIKQAYKQMARKYHPDVSPPDRIEEYTRKFIKVQEAYETLSDP 127
           +  +Y +LGV ++ +  EIK AY+++AR YHPDV+     EE   KF ++  AYE LSD 
Sbjct: 84  DADYYSVLGVSKNATKAEIKSAYRKLARNYHPDVNKDPGAEE---KFKEISNAYEVLSDD 143

Query: 128 VMRDLYDRDMARGL 142
             + LYDR    GL
Sbjct: 144 EKKSLYDRYGEAGL 154

[Close]
BLAST of Carg10152 vs. TAIR10
Match: AT3G13310.1 (Chaperone DnaJ-domain superfamily protein)

HSP 1 Score: 63.2 bits (152), Expect = 2.2e-10
Identity = 31/65 (47.69%), Postives = 42/65 (64.62%), Query Frame = 0 

Query: 70  SFYELLGVPESGSMVEIKQAYKQMARKYHPDVSPPDRIEEYTRKFIKVQEAYETLSDPVM 129
           S YELL V E+ S+ EIK AY+ +A+ YHPD S  D      R F+++ +AY TL+DP  
Sbjct: 64  SLYELLKVNETASLTEIKTAYRSLAKVYHPDASESD-----GRDFMEIHKAYATLADPTT 123

Query: 130 RDLYD 135
           R +YD
Sbjct: 124 RAIYD 123

[Close]
BLAST of Carg10152 vs. TAIR10
Match: AT4G39960.1 (Molecular chaperone Hsp40/DnaJ family protein)

HSP 1 Score: 62.8 bits (151), Expect = 2.9e-10
Identity = 31/68 (45.59%), Postives = 43/68 (63.24%), Query Frame = 0 

Query: 68  EISFYELLGVPESGSMVEIKQAYKQMARKYHPDVSPPDRIEEYTRKFIKVQEAYETLSDP 127
           +  FY +LGV ++ +  EIK AY+++AR YHPDV+     E+   KF ++  AYE LSD 
Sbjct: 83  DTDFYSVLGVSKNATKAEIKSAYRKLARSYHPDVNKDAGAED---KFKEISNAYEILSDD 142

Query: 128 VMRDLYDR 136
             R LYDR
Sbjct: 143 EKRSLYDR 147

[Close]
BLAST of Carg10152 vs. Swiss-Prot
Match: sp|Q9SDN0|DNJ20_ARATH (Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ATJ20 PE=1 SV=2)

HSP 1 Score: 166.8 bits (421), Expect = 2.6e-40
Identity = 89/163 (54.60%), Postives = 119/163 (73.01%), Query Frame = 0 

Query: 38  VLFPKLTRPPSACVRAKATVVNEALVSDAVEISFYELLGVPESGSMVEIKQAYKQMARKY 97
           + +P  TR  S  ++++ T  ++  V  + ++SFY+LLGV ES ++ EIKQAYKQ+ARKY
Sbjct: 36  ISYPTRTRFSSTRIQSRLT--HDDPVKQSEDLSFYDLLGVTESVTLPEIKQAYKQLARKY 95

Query: 98  HPDVSPPDRIEEYTRKFIKVQEAYETLSDPVMRDLYDRDMARGLHLAFSARRRG-YNHEE 157
           HPDVSPPDR+EEYT +FI+VQEAYETLSDP  R LYDRD++ G   +FS RR+  Y+ E 
Sbjct: 96  HPDVSPPDRVEEYTDRFIRVQEAYETLSDPRRRVLYDRDLSMGFSFSFSGRRQNRYDQEV 155

Query: 158 MDEKGGWKSRWQDQLSELKRRSMNKNSRANMSWGARMRSQRDE 200
           ++EK  WK++WQ QLS L+RRS N+     MSW ARMR Q+ E
Sbjct: 156 VEEKSEWKAKWQTQLSGLRRRS-NQKDNNTMSWAARMRRQQQE 195

[Close]
BLAST of Carg10152 vs. Swiss-Prot
Match: sp|Q0III6|DNJB6_BOVIN (DnaJ homolog subfamily B member 6 OS=Bos taurus OX=9913 GN=DNAJB6 PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.1e-11
Identity = 36/73 (49.32%), Postives = 50/73 (68.49%), Query Frame = 0 

Query: 69  ISFYELLGVPESGSMVEIKQAYKQMARKYHPDVSPPDRIEEYTRKFIKVQEAYETLSDPV 128
           + +YE+LGV    S  +IK+AY+++A K+HPD +P ++ EE  RKF +V EAYE LSD  
Sbjct: 2   VDYYEVLGVQRHASAEDIKKAYRKLALKWHPDKNPENK-EEAERKFKQVAEAYEVLSDAK 61

Query: 129 MRDLYDRDMARGL 142
            RD+YDR    GL
Sbjct: 62  KRDIYDRYGKEGL 73

[Close]
BLAST of Carg10152 vs. Swiss-Prot
Match: sp|O66921|DNAJ2_AQUAE (Chaperone protein DnaJ 2 OS=Aquifex aeolicus (strain VF5) OX=224324 GN=dnaJ2 PE=3 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.5e-11
Identity = 33/72 (45.83%), Postives = 48/72 (66.67%), Query Frame = 0 

Query: 63  VSDAVEISFYELLGVPESGSMVEIKQAYKQMARKYHPDVSPPDRIEEYTRKFIKVQEAYE 122
           ++ + +  +YE+LGVP + S  EIK+AY+++ RKYHPD+      EE   KF ++ EAY+
Sbjct: 1   MASSTKKDYYEILGVPRNASQEEIKKAYRRLVRKYHPDICKKPECEE---KFKEINEAYQ 60

Query: 123 TLSDPVMRDLYD 135
            LSDP  R LYD
Sbjct: 61  VLSDPEKRKLYD 69

[Close]
BLAST of Carg10152 vs. Swiss-Prot
Match: sp|B9MJZ0|DNAJ_CALBD (Chaperone protein DnaJ OS=Caldicellulosiruptor bescii (strain ATCC BAA-1888 / DSM 6725 / Z-1320) OX=521460 GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.9e-11
Identity = 32/65 (49.23%), Postives = 48/65 (73.85%), Query Frame = 0 

Query: 71  FYELLGVPESGSMVEIKQAYKQMARKYHPDVSPPDRIEEYTRKFIKVQEAYETLSDPVMR 130
           +YE+LGVP + +  EIK+AY+++A++YHPD +P ++  E   KF ++ EAYE LSDP  R
Sbjct: 7   YYEILGVPRNATEEEIKRAYRRLAKQYHPDANPGNK--EAEEKFKEINEAYEVLSDPEKR 66

Query: 131 DLYDR 136
            LYD+
Sbjct: 67  KLYDQ 69

[Close]
BLAST of Carg10152 vs. Swiss-Prot
Match: sp|Q9WZV3|DNAJ_THEMA (Chaperone protein DnaJ OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) OX=243274 GN=dnaJ PE=3 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.9e-11
Identity = 32/65 (49.23%), Postives = 48/65 (73.85%), Query Frame = 0 

Query: 71  FYELLGVPESGSMVEIKQAYKQMARKYHPDVSPPDRIEEYTRKFIKVQEAYETLSDPVMR 130
           +YE+LGVP   +  EIK+AYK++ +++HPD  P +R +E  ++F ++QEAYE LSDP  R
Sbjct: 8   YYEILGVPRDATQEEIKRAYKRLVKEWHPDRHPENR-KEAEQRFKEIQEAYEVLSDPQKR 67

Query: 131 DLYDR 136
            +YDR
Sbjct: 68  AMYDR 71

[Close]
BLAST of Carg10152 vs. TrEMBL
Match: tr|A0A1S3C500|A0A1S3C500_CUCME (chaperone protein dnaJ 20, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103496947 PE=4 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 6.3e-84
Identity = 159/204 (77.94%), Postives = 178/204 (87.25%), Query Frame = 0 

Query: 1   MRSCGLALSGTDSRCYLPAMPPIFSPMRACPPEGNSQVLFPKLTRPPSACVRAKATVVNE 60
           MRSCGLALSGTDSRCY PA PPIFSP RA     NSQV F K  RPPSACVR KA  +N+
Sbjct: 1   MRSCGLALSGTDSRCYFPATPPIFSPRRA----SNSQVSFLKSPRPPSACVRVKAAFIND 60

Query: 61  ALVSDAVEISFYELLGVPESGSMVEIKQAYKQMARKYHPDVSPPDRIEEYTRKFIKVQEA 120
           A+VSDAVE+SFYELLGVPESGSM+EIKQAYKQMA KYHPDVSPP RIEEYTRKFIK+QEA
Sbjct: 61  AVVSDAVEVSFYELLGVPESGSMLEIKQAYKQMALKYHPDVSPPGRIEEYTRKFIKLQEA 120

Query: 121 YETLSDPVMRDLYDRDMARGLHLAFSARRRGYNHEEMDEKGGWKSRWQDQLSELKRRSMN 180
           YETLSDP MR LYDRD+ARGL  AFS+R+R Y+HEEM+EK GW++RWQDQLS LKRRSMN
Sbjct: 121 YETLSDPNMRALYDRDLARGLQFAFSSRKRCYDHEEMEEKSGWRNRWQDQLSGLKRRSMN 180

Query: 181 KNSRANMSWGARMRSQRDELHNDE 205
           ++S+ANMSWGARMR +RDELH ++
Sbjct: 181 RDSKANMSWGARMRRERDELHKED 200

[Close]
BLAST of Carg10152 vs. TrEMBL
Match: tr|A0A2P5A3X2|A0A2P5A3X2_PARAD (Terminal organelle assembly protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_371400 PE=4 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 1.4e-59
Identity = 133/215 (61.86%), Postives = 160/215 (74.42%), Query Frame = 0 

Query: 1   MRSCGLALSGTDSRCYLPA-MPPIFSPMRACPPEGNSQVLFPKLTRPP---SACVRA--- 60
           MR  GL +SG+DSR  +P    PI +P    PP  N   LF  +  P    SA +R    
Sbjct: 1   MRCHGLTISGSDSRFLVPQYSTPISTPR---PPNPNLSPLFFSVRIPKPVYSARIRVGPV 60

Query: 61  ---KATVVNEALVSD--AVEISFYELLGVPESGSMVEIKQAYKQMARKYHPDVSPPDRIE 120
               A+ V++ LV++  A E+SFYELLG+PESGS+V+IKQAYKQ+ARKYHPDVSPPDR+E
Sbjct: 61  KAKAASAVDDGLVAEAAAAELSFYELLGIPESGSLVQIKQAYKQLARKYHPDVSPPDRVE 120

Query: 121 EYTRKFIKVQEAYETLSDPVMRDLYDRDMARGLHLAFSARRRGYNHEEMDEKGGWKSRWQ 180
           EYTR+FI+VQEAYETLSDP  R +YDRDMA+GLHLAFSARRR  N E M+EK  WK+RWQ
Sbjct: 121 EYTRRFIRVQEAYETLSDPRRRAMYDRDMAKGLHLAFSARRRYQNDEGMEEKSEWKTRWQ 180

Query: 181 DQLSELKRRSMNKNSRANMSWGARMRSQRDELHND 204
            QLSELKRRSMNK+ R NMSWGARMR +RD+L N+
Sbjct: 181 SQLSELKRRSMNKDVRGNMSWGARMRRRRDDLSNE 212

[Close]
BLAST of Carg10152 vs. TrEMBL
Match: tr|A0A2P5C875|A0A2P5C875_9ROSA (Terminal organelle assembly protein OS=Trema orientalis OX=63057 GN=TorRG33x02_294110 PE=4 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 6.5e-57
Identity = 130/214 (60.75%), Postives = 156/214 (72.90%), Query Frame = 0 

Query: 1   MRSCGLALSGTDSRCYLPAMPPIFSPMRACPPEGNSQVLF-----PK---LTRPPSACVR 60
           MR  GL + G+DSR  +       S  R  PP  N   LF     PK    TR     V+
Sbjct: 1   MRCYGLTIPGSDSRFLISQNSTPVSTSR--PPNPNLSPLFFTVRIPKPVYSTRIRVGPVK 60

Query: 61  AK-ATVVNEALVSD--AVEISFYELLGVPESGSMVEIKQAYKQMARKYHPDVSPPDRIEE 120
           AK A+ V++  V++  A E+SFYELLG+PESGS+VEIKQAYKQ+ARKYHPDVSPPDR+EE
Sbjct: 61  AKAASAVDDGFVAEAAAAELSFYELLGIPESGSLVEIKQAYKQLARKYHPDVSPPDRVEE 120

Query: 121 YTRKFIKVQEAYETLSDPVMRDLYDRDMARGLHLAFSARRRGYNHEEMDEKGGWKSRWQD 180
           YTR+FI+VQEAYETLSDP  R +YDRDMA+GLHLAFSARRR  N E ++EK  WK+RWQ 
Sbjct: 121 YTRRFIRVQEAYETLSDPRRRAMYDRDMAKGLHLAFSARRRHQNDEGLEEKSEWKNRWQS 180

Query: 181 QLSELKRRSMNKNSRANMSWGARMRSQRDELHND 204
           Q+SELKRRSMNK+   NMSWGARMR +RD+L N+
Sbjct: 181 QVSELKRRSMNKDVGGNMSWGARMRRRRDDLSNE 212

[Close]
BLAST of Carg10152 vs. TrEMBL
Match: tr|M5XGN9|M5XGN9_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G163300 PE=4 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 5.2e-54
Identity = 122/203 (60.10%), Postives = 148/203 (72.91%), Query Frame = 0 

Query: 1   MRSCGLALSGTDSRCYLPAMPPIFSPMRACPPEGNSQVLFPK-----LTRPPSACVRAKA 60
           MRS GLA+SG+DS  Y+P      S  R   P+     LF K      +   S  + AKA
Sbjct: 1   MRSYGLAISGSDSCFYIPTTHTAISTRRPI-PDRKPNFLFAKPDFSFRSGFGSLRLEAKA 60

Query: 61  TVVNEALVSDAVEISFYELLGVPESGSMVEIKQAYKQMARKYHPDVSPPDRIEEYTRKFI 120
            + +  +V++  E++FYELLG+PESGS+ +IKQAYK +ARKYHPDVSPPDR+EE T KFI
Sbjct: 61  AINDGVMVAEHKELTFYELLGIPESGSVTQIKQAYKLLARKYHPDVSPPDRVEENTEKFI 120

Query: 121 KVQEAYETLSDPVMRDLYDRDMARGLHLAFSARRRGYNHEEMDEKGGWKSRWQDQLSELK 180
           +VQEAYETLSD   R +YDRDMARGLHLAFSARR  Y+ E M+EKG WK+RWQ QLS LK
Sbjct: 121 RVQEAYETLSDSRRRAMYDRDMARGLHLAFSARRCQYD-EGMEEKGDWKNRWQSQLSGLK 180

Query: 181 RRSMNKNSRANMSWGARMRSQRD 199
           RRSMNKN+R +MSWGARMR QR+
Sbjct: 181 RRSMNKNAREHMSWGARMRRQRE 201

[Close]
BLAST of Carg10152 vs. TrEMBL
Match: tr|A0A2C9W9M2|A0A2C9W9M2_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_03G144800 PE=4 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 8.8e-54
Identity = 116/200 (58.00%), Postives = 149/200 (74.50%), Query Frame = 0 

Query: 1   MRSCGLALSGTDSRCYLPAMPPIFSPMRACPPEGNSQVLFPKLTRPPSACVRAKATVVNE 60
           MRS GL + G+D+  +  +     S + +   + +  + F  +TR P A  + KA V   
Sbjct: 1   MRSYGLIIPGSDASRFCFSSTTGSSTVTS---KADPILRFKPVTRFPRASFKTKAAVQE- 60

Query: 61  ALVSDAVEISFYELLGVPESGSMVEIKQAYKQMARKYHPDVSPPDRIEEYTRKFIKVQEA 120
              S + ++SFYELLG+PESG+++EIKQAYKQ+ARKYHPDVSPPDR+EEYT++FI+VQEA
Sbjct: 61  ---SISTDMSFYELLGIPESGTLIEIKQAYKQLARKYHPDVSPPDRVEEYTQRFIQVQEA 120

Query: 121 YETLSDPVMRDLYDRDMARGLHLAFSARRRGYNHEEMDEKGGWKSRWQDQLSELKRRSMN 180
           YETLSDP  R LYDRDMARGLHLAFSARRR  N EE++ +G WK+RW+ QLSELKRRSMN
Sbjct: 121 YETLSDPRSRALYDRDMARGLHLAFSARRRYQNDEELEVRGEWKNRWEAQLSELKRRSMN 180

Query: 181 KNSRANMSWGARMRSQRDEL 201
           K++  NMSW ARMR QR+ +
Sbjct: 181 KDAEGNMSWAARMRRQRERM 193

The following BLAST results are available for this feature:
BLAST of Carg10152 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022959157.18.2e-11299.03chaperone protein dnaJ 20, chloroplastic-like [Cucurbita moschata][more]
XP_023549024.15.0e-10997.07chaperone protein dnaJ 20, chloroplastic-like [Cucurbita pepo subsp. pepo][more]
XP_023006292.13.6e-10795.15chaperone protein dnaJ 20, chloroplastic-like [Cucurbita maxima][more]
XP_023000441.11.6e-8682.93chaperone protein dnaJ 20, chloroplastic [Cucurbita maxima][more]
XP_022964372.11.1e-8480.49chaperone protein dnaJ 20, chloroplastic-like [Cucurbita moschata][more]
BLAST of Carg10152 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G13830.21.4e-4154.60DNAJ-like 20[more]
AT3G62600.15.8e-1144.44DNAJ heat shock family protein[more]
AT2G22360.11.7e-1043.24DNAJ heat shock family protein[more]
AT3G13310.12.2e-1047.69Chaperone DnaJ-domain superfamily protein[more]
AT4G39960.12.9e-1045.59Molecular chaperone Hsp40/DnaJ family protein[more]
BLAST of Carg10152 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9SDN0|DNJ20_ARATH2.6e-4054.60Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ATJ2... [more]
sp|Q0III6|DNJB6_BOVIN1.1e-1149.32DnaJ homolog subfamily B member 6 OS=Bos taurus OX=9913 GN=DNAJB6 PE=2 SV=1[more]
sp|O66921|DNAJ2_AQUAE1.5e-1145.83Chaperone protein DnaJ 2 OS=Aquifex aeolicus (strain VF5) OX=224324 GN=dnaJ2 PE=... [more]
sp|B9MJZ0|DNAJ_CALBD1.9e-1149.23Chaperone protein DnaJ OS=Caldicellulosiruptor bescii (strain ATCC BAA-1888 / DS... [more]
sp|Q9WZV3|DNAJ_THEMA1.9e-1149.23Chaperone protein DnaJ OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 31... [more]
BLAST of Carg10152 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3C500|A0A1S3C500_CUCME6.3e-8477.94chaperone protein dnaJ 20, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC1034... [more]
tr|A0A2P5A3X2|A0A2P5A3X2_PARAD1.4e-5961.86Terminal organelle assembly protein OS=Parasponia andersonii OX=3476 GN=PanWU01x... [more]
tr|A0A2P5C875|A0A2P5C875_9ROSA6.5e-5760.75Terminal organelle assembly protein OS=Trema orientalis OX=63057 GN=TorRG33x02_2... [more]
tr|M5XGN9|M5XGN9_PRUPE5.2e-5460.10Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G163300 PE=4 SV=1[more]
tr|A0A2C9W9M2|A0A2C9W9M2_MANES8.8e-5458.00Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_03G144800 PE=4 SV=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR018253DnaJ_domain_CS
IPR036869J_dom_sf
IPR001623DnaJ_domain
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg10152-RACarg10152-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001623DnaJ domainPRINTSPR00625JDOMAINcoord: 109..129
score: 41.33
coord: 90..105
score: 46.22
coord: 72..90
score: 47.51
IPR001623DnaJ domainSMARTSM00271dnaj_3coord: 69..129
e-value: 1.5E-20
score: 84.3
IPR001623DnaJ domainPFAMPF00226DnaJcoord: 71..134
e-value: 4.5E-20
score: 71.4
IPR001623DnaJ domainPROSITEPS50076DNAJ_2coord: 70..137
score: 19.018
IPR001623DnaJ domainCDDcd06257DnaJcoord: 71..126
e-value: 2.44338E-19
score: 77.5857
IPR036869Chaperone J-domain superfamilyGENE3DG3DSA:1.10.287.110coord: 59..159
e-value: 3.1E-22
score: 80.5
IPR036869Chaperone J-domain superfamilySUPERFAMILYSSF46565Chaperone J-domaincoord: 69..144
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 174..206
NoneNo IPR availablePANTHERPTHR45090FAMILY NOT NAMEDcoord: 42..202
IPR018253DnaJ domain, conserved sitePROSITEPS00636DNAJ_1coord: 114..133

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg10152Cla021401Watermelon (97103) v1carwmB0218
Carg10152MELO3C006295Melon (DHL92) v3.5.1carmeB0236
Carg10152MELO3C020425Melon (DHL92) v3.5.1carmeB0233
Carg10152ClCG05G003140Watermelon (Charleston Gray)carwcgB0220
Carg10152CSPI03G10650Wild cucumber (PI 183967)carcpiB0261
Carg10152Cucsa.256640Cucumber (Gy14) v1carcgyB0269
Carg10152CmaCh06G012000Cucurbita maxima (Rimu)carcmaB0317
Carg10152CmaCh08G009980Cucurbita maxima (Rimu)carcmaB0318
Carg10152CmaCh17G000850Cucurbita maxima (Rimu)carcmaB0314
Carg10152CmaCh14G019070Cucurbita maxima (Rimu)carcmaB0313
Carg10152CmoCh08G009710Cucurbita moschata (Rifu)carcmoB0323
Carg10152CmoCh17G000910Cucurbita moschata (Rifu)carcmoB0320
Carg10152CmoCh14G019620Cucurbita moschata (Rifu)carcmoB0319
Carg10152CmoCh06G012370Cucurbita moschata (Rifu)carcmoB0322
Carg10152Lsi05G018600Bottle gourd (USVL1VR-Ls)carlsiB206
Carg10152Lsi09G011220Bottle gourd (USVL1VR-Ls)carlsiB204
Carg10152Cp4.1LG12g00650Cucurbita pepo (Zucchini)carcpeB0322
Carg10152Cp4.1LG17g02940Cucurbita pepo (Zucchini)carcpeB0324
Carg10152Cp4.1LG03g18080Cucurbita pepo (Zucchini)carcpeB0327
Carg10152Cp4.1LG08g02660Cucurbita pepo (Zucchini)carcpeB0329
Carg10152CsGy3G010700Cucumber (Gy14) v2carcgybB0245
Carg10152MELO3C006295.2Melon (DHL92) v3.6.1carmedB0243
Carg10152MELO3C020425.2Melon (DHL92) v3.6.1carmedB0240
Carg10152CsaV3_3G010760Cucumber (Chinese Long) v3carcucB0260
Carg10152Cla97C05G083770Watermelon (97103) v2carwmbB0229
Carg10152Bhi12G001278Wax gourdcarwgoB0282
Carg10152Bhi01G000145Wax gourdcarwgoB0285
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg10152Carg06307Silver-seed gourdcarcarB266
Carg10152Carg11046Silver-seed gourdcarcarB268
The following block(s) are covering this gene:
GeneOrganismBlock
Carg10152Silver-seed gourdcarcarB267
Carg10152Cucumber (Gy14) v1carcgyB0270
Carg10152Cucurbita maxima (Rimu)carcmaB0321
Carg10152Cucurbita moschata (Rifu)carcmoB0326
Carg10152Cucurbita pepo (Zucchini)carcpeB0323
Carg10152Cucumber (Chinese Long) v2carcuB0257
Carg10152Watermelon (Charleston Gray)carwcgB0221
Carg10152Watermelon (97103) v1carwmB0219
Carg10152Watermelon (97103) v2carwmbB0230