Cp4.1LG06g07800 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG06g07800
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	BEST Arabidopsis thaliana protein match is: embryo defective 2170 .
Location	Cp4.1LG06 : 5714915 .. 5716785 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTGGTTCTAGCAGAAAGCTGCTCTCAAGCCCTACCGAATCCCCTGATTTTAGGGCTTTTGACGCCATGGATTTCGGTTCTCCTGCTTCAACCAGGTCCAGGTCCAGCTCCAGGCCGGCGTTGAATCATGACATCTTCAGGAGTTGGAATGGGAAGCAGATTCATCTTAAGGATGATGAGACGGTGGAGTATGGATTTCGTTTGAGTAGTCCTCAACGGAGCCCGCAGTTTTACCGATCTAATTACCAGAGCCTGTCTCCGCCTTCGAAGGCTCTTGCTATTGCTACTGGACAGAAGGAGCTTATGGAACTTGTGAATAATATGCCGGAGTCGTGTTACGAGTTGTCGTTGAGAGACTTGGTGGAGCAGCCGATGGTTTTAGGACAGCAAGAACCAACTGGAGCGAATGAGAGGGATAAAGGCGGTGATCGGGAGGTTTTTGCGATGGAGAATCGGAAATCGAGGAAGGAAACTAGCGCGTTGGTTGGGAGAAGTTCGTGGAATATGGAGAATGGAGGTTTGTATCTGAAAATGGGATTTCCGAATTCTATTGGAACTAGAACGAAGAAGAAGAAGAAGAACAACAACAACGATTCTGGTTTGAACACGAGTGCTAAAGTTTCACCTAAACCTTCTCATCCGGTGGAAAAGGATTGGTGGAAGAGAAGACTCTCAGTTTCATCTGAGACTGGAAGCGTTGCTTATGATTCTAGTGTTAACAATGGAAGCATCAAGAGCAGTAGCAGTAGCAGCAGTAATGGCAGCAATGGCAGCAACAAGAACAGAACAAAATCCTCCGGCAGGTAACACCATAGCTAGTAATTAATGGTTTCTCTGATTCACTCTCCACTTTTTAGCTTGAGAAATGAATGTTTGATCTTCTTAGTTGATATTAAGAACAGAGAAATTCACCATTCAAAACAACTACTTCTACTTTGAATCATTTCGGCTAGTAATTTCTCAATCTGTCCAGGGATCTAGTACCATAACAATTTCCTGAGTTGAATATGAGGTTTTTGAAGAACCTGCAAATTCACTGTTCGAAATAGAATCATTTCTACTCTGCATCATTTTATATAGTTTAATTTCTCAAGCTGTTTCGTGATCTAATATCCTAGGAATCTGCCGAGTAGAATTGAATATGAATGGGTTTTCTCTGAAATGAAGAACAGGCAAACTCCATTAAATACAGAATCATTCCAACTCTGCATCATTTTGGATAGTTAAGATTTCTCAAGCTGTTTCATGCTCTAATATCCTAAGAATCTGCTGAGTTAAATTGAATATGAATGGGTTTTCTCTGAAATGAAGAACAGACAAATCTCCATTAAACAGAGAATCATTCTAACTCTGCATCATTTTGGGTAGTAAAAATGTAATTTCTACTCTGAATTATTCGAGCGTTTAGAATCTCTCAAGCTGTTCATGAATCTGTTAACATAGAATGTTCTTCAAACTGGGTCTATCACAATTCTTATGAATCATAATTGAATTACAGGCATGCGAATGGAGGTTGCTGGTCATGTATTTATCCCAAATACAATGAACGGGATGAATGAAGAGGCTGCTGATCCGCCATAGGTATATAAAGATATGGAAATGAAGGCATTAGTCTTACACAGCGTCTGTAAATTCTCTTCCAGTTTTTCAACTAAAATGCTCCCTTTTTGTTCTTGCTTCTTAATATATCTATATATATATCTATATATATTGATATATATCAATATATATATATACATATATATATATATATATATATATATGTATGTATACCCTGTGTCGTACTCCAGGGTTCATCTTCTTTAAGCTAATTGACAGAATGAATCTCCTCTTCCAGAGAAATTGATCTGTTTGTTTATTCCATTTTC

mRNA sequence

ATGCTTGGTTCTAGCAGAAAGCTGCTCTCAAGCCCTACCGAATCCCCTGATTTTAGGGCTTTTGACGCCATGGATTTCGGTTCTCCTGCTTCAACCAGGTCCAGGTCCAGCTCCAGGCCGGCGTTGAATCATGACATCTTCAGGAGTTGGAATGGGAAGCAGATTCATCTTAAGGATGATGAGACGGTGGAGTATGGATTTCGTTTGAGTAGTCCTCAACGGAGCCCGCAGTTTTACCGATCTAATTACCAGAGCCTGTCTCCGCCTTCGAAGGCTCTTGCTATTGCTACTGGACAGAAGGAGCTTATGGAACTTGTGAATAATATGCCGGAGTCGTGTTACGAGTTGTCGTTGAGAGACTTGGTGGAGCAGCCGATGGTTTTAGGACAGCAAGAACCAACTGGAGCGAATGAGAGGGATAAAGGCGGTGATCGGGAGGTTTTTGCGATGGAGAATCGGAAATCGAGGAAGGAAACTAGCGCGTTGGTTGGGAGAAGTTCGTGGAATATGGAGAATGGAGGTTTGTATCTGAAAATGGGATTTCCGAATTCTATTGGAACTAGAACGAAGAAGAAGAAGAAGAACAACAACAACGATTCTGGCATGCGAATGGAGGTTGCTGGTCATGTATTTATCCCAAATACAATGAACGGGATGAATGAAGAGGCTGCTGATCCGCCATAGGTATATAAAGATATGGAAATGAAGGCATTAGTCTTACACAGCGTCTGTAAATTCTCTTCCAGTTTTTCAACTAAAATGCTCCCTTTTTGTTCTTGCTTCTTAATATATCTATATATATATCTATATATATTGATATATATCAATATATATATATACATATATATATATATATATATATATATGTATGTATACCCTGTGTCGTACTCCAGGGTTCATCTTCTTTAAGCTAATTGACAGAATGAATCTCCTCTTCCAGAGAAATTGATCTGTTTGTTTATTCCATTTTC

Coding sequence (CDS)

ATGCTTGGTTCTAGCAGAAAGCTGCTCTCAAGCCCTACCGAATCCCCTGATTTTAGGGCTTTTGACGCCATGGATTTCGGTTCTCCTGCTTCAACCAGGTCCAGGTCCAGCTCCAGGCCGGCGTTGAATCATGACATCTTCAGGAGTTGGAATGGGAAGCAGATTCATCTTAAGGATGATGAGACGGTGGAGTATGGATTTCGTTTGAGTAGTCCTCAACGGAGCCCGCAGTTTTACCGATCTAATTACCAGAGCCTGTCTCCGCCTTCGAAGGCTCTTGCTATTGCTACTGGACAGAAGGAGCTTATGGAACTTGTGAATAATATGCCGGAGTCGTGTTACGAGTTGTCGTTGAGAGACTTGGTGGAGCAGCCGATGGTTTTAGGACAGCAAGAACCAACTGGAGCGAATGAGAGGGATAAAGGCGGTGATCGGGAGGTTTTTGCGATGGAGAATCGGAAATCGAGGAAGGAAACTAGCGCGTTGGTTGGGAGAAGTTCGTGGAATATGGAGAATGGAGGTTTGTATCTGAAAATGGGATTTCCGAATTCTATTGGAACTAGAACGAAGAAGAAGAAGAAGAACAACAACAACGATTCTGGCATGCGAATGGAGGTTGCTGGTCATGTATTTATCCCAAATACAATGAACGGGATGAATGAAGAGGCTGCTGATCCGCCATAG

Protein sequence

MLGSSRKLLSSPTESPDFRAFDAMDFGSPASTRSRSSSRPALNHDIFRSWNGKQIHLKDDETVEYGFRLSSPQRSPQFYRSNYQSLSPPSKALAIATGQKELMELVNNMPESCYELSLRDLVEQPMVLGQQEPTGANERDKGGDREVFAMENRKSRKETSALVGRSSWNMENGGLYLKMGFPNSIGTRTKKKKKNNNNDSGMRMEVAGHVFIPNTMNGMNEEAADPP

Homology

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BLAST of Cp4.1LG06g07800 vs. TrEMBL
Match: A0A0A0KH64_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G397170 PE=4 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 1.8e-78
Identity = 159/210 (75.71%), Postives = 177/210 (84.29%), Query Frame = 1


Query: 1   MLGSSRKLLSSPTESPDFRAFDA-MDFGSPASTRSRSSSRPALNHDIFRSWNGKQIHLKD 60
           M+GS+RKLLSSPTESPDFRA +  M+F SP       SSRPALNHDIFRSWNGKQIHL+D
Sbjct: 1   MIGSTRKLLSSPTESPDFRALNTTMEFSSPTR-----SSRPALNHDIFRSWNGKQIHLRD 60

Query: 61  DETVEYGFRLSSPQRSPQFYRSNYQSLSPPSKALAIATGQKELMELVNNMPESCYELSLR 120
           D   EYGFRL+SPQRSPQFYRSNY +LSPPSKALAIATGQKELME+VNNMPESCYELSLR
Sbjct: 61  DHPFEYGFRLTSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLR 120

Query: 121 DLVEQPMVLGQQEPTGANERDK--GGDREVFAMENRKSRKETSALVGRSSWNMENGGLYL 180
           DLVEQPMVLGQ+E TG +E+D   GGDREVF+ ENRKSRKET ALVGR+S  MEN GLYL
Sbjct: 121 DLVEQPMVLGQREDTGVDEKDSYLGGDREVFSRENRKSRKETRALVGRTS--MENEGLYL 180

Query: 181 KMGFPNSIGTRTKKKKKNNNNDSGMRMEVA 208
           KMGFP SIGT T+KKKK N++   M  +V+
Sbjct: 181 KMGFPKSIGTTTRKKKKKNDSSLNMSAKVS 203

[Close]

BLAST of Cp4.1LG06g07800 vs. TrEMBL
Match: B9H7L2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s20730g PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.2e-21
Identity = 83/206 (40.29%), Postives = 112/206 (54.37%), Query Frame = 1


Query: 8   LLSSPTESPDFRAFDAMDFGSPASTRSRSSSRP-ALNHDIFRSWNGKQI---HLKDDETV 67
           +L+  TESPD +      + S         SR  A N+  ++ WN   I     KD +  
Sbjct: 1   MLNPGTESPDDQVHSGDRYNSNGILSYGVLSRKTADNYGNYQGWNSMGIFGAQRKDVQAE 60

Query: 68  EYG-----FRLSSPQRSPQFYRSNYQSLSPPSKALAIATGQKELMELVNNMPESCYELSL 127
           E G        +SP RSPQ  +++Y+SLSP S+  AIA GQKELME+V+ MPE CYELSL
Sbjct: 61  ESGVCSPPLWRTSPPRSPQHRQNHYRSLSPSSRTQAIARGQKELMEMVSRMPEGCYELSL 120

Query: 128 RDLVEQPMVLGQ-QEPTGANERD--KGGDREVFAMENRKSRK----ETSALVGRSSWNME 187
           RD+VEQPMV+   +E + + +R     GD  +   E  K +K    E    + RS  ++ 
Sbjct: 121 RDIVEQPMVVADAKEESFSEDRSIINQGDMHILRREQEKKKKKKKIEKKVHMNRSGSSI- 180

Query: 188 NGGLYLKMGFPNSIGTRTKKKKKNNN 198
           N G  LKM FP S G+R KKK  N+N
Sbjct: 181 NEGFLLKMVFPISFGSRKKKKNSNSN 205

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BLAST of Cp4.1LG06g07800 vs. TrEMBL
Match: A5C140_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_018084 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 2.2e-20
Identity = 77/209 (36.84%), Postives = 115/209 (55.02%), Query Frame = 1


Query: 10  SSPTESPDFRAFDAMDFGSPASTRSRSSSRPALNHDIFRSWNGKQIHLKDDETVEYGFRL 69
           S P  +  + ++ +M FG           R A NH+ + +WNG       +  VE    +
Sbjct: 38  SEPXINDSYGSWGSMRFGG-------RPQRSARNHENYGAWNGGDWQFGAEAKVEDESGV 97

Query: 70  SSP---QRSP-------------QFYRSNYQSLSPPSKALAIATGQKELMELVNNMPESC 129
            SP   + SP             + ++++Y+SLSP S+  AIA GQ+ELME+V NMPESC
Sbjct: 98  CSPPLWKTSPSGSPNGGNSPLHRRHHQNHYRSLSPASRMQAIAQGQRELMEMVRNMPESC 157

Query: 130 YELSLRDLVEQPMVLGQQEPTGANERDKGGD----REVFAMENRKSRKETSALVGRSSWN 189
           YELSL+DLVE+P+V   Q+P    +R+ G +    RE   +++RK + +T   +GRS  +
Sbjct: 158 YELSLKDLVERPVVQAPQDPF-PEKRNFGDEIATSREKKKVKDRKKKNDTKPKMGRSG-S 217

Query: 190 MENGGLYLKMGFPNSIGTRTKKKKKNNNN 199
           ++NGG  LKM FP  +  R KKKK +  N
Sbjct: 218 LDNGGFLLKMVFP--VSFRLKKKKNSATN 235

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BLAST of Cp4.1LG06g07800 vs. TrEMBL
Match: A0A067LEZ8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25276 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 5.0e-20
Identity = 63/134 (47.01%), Postives = 85/134 (63.43%), Query Frame = 1


Query: 70  SSPQRSPQFYRSNYQSLSPPSKALAIATGQKELMELVNNMPESCYELSLRDLVEQPMVLG 129
           +SP RSPQ  +++Y+SLSP S+A AIA GQ+ELME+V+ MPE CYELSL+D+VE  +V  
Sbjct: 66  TSPARSPQHRQNHYRSLSPSSRAQAIARGQRELMEMVSRMPEGCYELSLKDIVEHGIVDQ 125

Query: 130 QQEPTGANERDKG------GDREVFAMENRKSRKETSALVGRS-SWNMENGGLYLKMGFP 189
           ++E     ER+KG       +R V      K R +    + RS S +   GG  LKM FP
Sbjct: 126 EKEKEKEKEREKGKQESFSKERNVSINSEEKKRHDKKVQMNRSASTHNSGGGFLLKMVFP 185

Query: 190 NSIGTRTKKKKKNN 197
            S+G+R KKKK N+
Sbjct: 186 VSLGSRRKKKKNNS 199

[Close]

BLAST of Cp4.1LG06g07800 vs. TrEMBL
Match: F6GZT7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g14950 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 6.5e-20
Identity = 76/194 (39.18%), Postives = 110/194 (56.70%), Query Frame = 1


Query: 26  FGSPASTR-SRSSSRPALNHDIFRSWNGKQIHLKDDETVEYGFRLSSP---QRSP----- 85
           +GS  S R      R A NH+ + +WNG       +  VE    + SP   + SP     
Sbjct: 21  YGSWGSMRFGGRPQRSARNHENYGAWNGGDWQFGAEAKVEDESGVCSPPLWKTSPSGSPN 80

Query: 86  --------QFYRSNYQSLSPPSKALAIATGQKELMELVNNMPESCYELSLRDLVEQPMVL 145
                   + ++++Y+SLSP S+  AIA GQ+ELME+V NMPESCYELSL+DLVE+P+V 
Sbjct: 81  GGNSPLHRRHHQNHYRSLSPASRMQAIAQGQRELMEMVRNMPESCYELSLKDLVERPVVQ 140

Query: 146 GQQEPTGANERDKGGD----REVFAMENRKSRKETSALVGRSSWNMENGGLYLKMGFPNS 199
             Q+P    +R+ G +    RE   +++RK + +T   +GRS  +++NGG  LKM FP  
Sbjct: 141 APQDPF-PEKRNFGDEIATSREKKKVKDRKKKNDTKPKMGRSG-SLDNGGFLLKMVFP-- 200

[Close]

BLAST of Cp4.1LG06g07800 vs. TAIR10
Match: AT1G76980.1 (AT1G76980.1 BEST Arabidopsis thaliana protein match is: embryo defective 2170 (TAIR:AT1G21390.1))

HSP 1 Score: 85.1 bits (209), Expect = 6.0e-17
Identity = 52/130 (40.00%), Postives = 76/130 (58.46%), Query Frame = 1


Query: 70  SSPQRSPQFYRSNYQSLSPPSKALAIATGQKELMELVNNMPESCYELSLRDLVEQPMVLG 129
           +SP +SP    +NYQ+LSP +KA  IA GQ+ELM++V+ MPESCYELSL+DLVE    + 
Sbjct: 37  TSPPKSPAHLHNNYQNLSPVTKAQVIARGQRELMDMVSKMPESCYELSLKDLVE----VN 96

Query: 130 QQEPTGANERDKGGDREVFAMENRKSRKETSALVGRSSWNMENGGLYLKMGFPNSIGTRT 189
            +E    +E  +   +    +   KS K    +    +  + N G  LK+ FP S+G + 
Sbjct: 97  TEEEKVFDEMPQREKKPRKVVRKTKSDKWVDPI---RNGGVNNSGFLLKLVFPVSLGAKK 156

Query: 190 KKKKKNNNND 200
           K  KK +N+D
Sbjct: 157 KTNKKKDNDD 159

[Close]

BLAST of Cp4.1LG06g07800 vs. TAIR10
Match: AT1G21390.1 (AT1G21390.1 embryo defective 2170)

HSP 1 Score: 82.0 bits (201), Expect = 5.1e-16
Identity = 60/138 (43.48%), Postives = 78/138 (56.52%), Query Frame = 1


Query: 67  FRLSSPQRSPQFYR-SNYQSLSPPSKALAIATGQKELMELVNNMPESCYELSLRDLVEQP 126
           +R S P+  P F+R  +Y SLSP SKA AIA GQ+ELME+V+ MPESCYELSL+DLVE  
Sbjct: 35  WRTSPPKSPPPFHRPEDYWSLSPDSKAQAIARGQRELMEMVSKMPESCYELSLKDLVE-V 94

Query: 127 MVLGQQEPTGANERDKGGDREVFAMENRKSRKETSALVGRSSWNMENGGLYLKMGFPNSI 186
            V  + E    +E  K  +R+   +   KS K         S    N G  LK+ F  S+
Sbjct: 95  KVNQENERKVFDELPKRANRQSKVVRKTKSDKRVDP---NRSGGGNNSGFLLKIMFLVSL 154

Query: 187 GT---RTKKKKKNNNNDS 201
           G     TKKKKK   +++
Sbjct: 155 GAMKDTTKKKKKKKKDEA 168

[Close]

BLAST of Cp4.1LG06g07800 vs. NCBI nr
Match: gi|659133347|ref|XP_008466690.1| (PREDICTED: uncharacterized protein LOC103504041 [Cucumis melo])

HSP 1 Score: 302.8 bits (774), Expect = 5.2e-79
Identity = 160/210 (76.19%), Postives = 179/210 (85.24%), Query Frame = 1


Query: 1   MLGSSRKLLSSPTESPDFRAFDA-MDFGSPASTRSRSSSRPALNHDIFRSWNGKQIHLKD 60
           M+G++RKLLSSPTESPDFRA +  M+F SP+ TRS   SRPALNHDIFRSWNGKQIHL+D
Sbjct: 1   MIGTARKLLSSPTESPDFRALNTTMEFSSPSPTRS---SRPALNHDIFRSWNGKQIHLRD 60

Query: 61  DETVEYGFRLSSPQRSPQFYRSNYQSLSPPSKALAIATGQKELMELVNNMPESCYELSLR 120
           D   EYGFRL+SPQRSPQFYRSNY +LSPPSKALAIATGQKELME+VNNMPESCYELSLR
Sbjct: 61  DHPFEYGFRLTSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLR 120

Query: 121 DLVEQPMVLGQQEPTGANERDK--GGDREVFAMENRKSRKETSALVGRSSWNMENGGLYL 180
           DLVEQPMV+GQ+E TG +ERD   GG REVF+ ENRKSRKET ALVGRSS  MEN GLYL
Sbjct: 121 DLVEQPMVVGQREDTGVDERDSNLGGHREVFSRENRKSRKETRALVGRSS--MENEGLYL 180

Query: 181 KMGFPNSIGTRTKKKKKNNNNDSGMRMEVA 208
           KMGFP SIGT T+KKKK N++   M  +V+
Sbjct: 181 KMGFPKSIGTTTRKKKKKNDSSLNMSAKVS 205

[Close]

BLAST of Cp4.1LG06g07800 vs. NCBI nr
Match: gi|449458095|ref|XP_004146783.1| (PREDICTED: uncharacterized protein LOC101215856 [Cucumis sativus])

HSP 1 Score: 300.4 bits (768), Expect = 2.6e-78
Identity = 159/210 (75.71%), Postives = 177/210 (84.29%), Query Frame = 1


Query: 1   MLGSSRKLLSSPTESPDFRAFDA-MDFGSPASTRSRSSSRPALNHDIFRSWNGKQIHLKD 60
           M+GS+RKLLSSPTESPDFRA +  M+F SP       SSRPALNHDIFRSWNGKQIHL+D
Sbjct: 1   MIGSTRKLLSSPTESPDFRALNTTMEFSSPTR-----SSRPALNHDIFRSWNGKQIHLRD 60

Query: 61  DETVEYGFRLSSPQRSPQFYRSNYQSLSPPSKALAIATGQKELMELVNNMPESCYELSLR 120
           D   EYGFRL+SPQRSPQFYRSNY +LSPPSKALAIATGQKELME+VNNMPESCYELSLR
Sbjct: 61  DHPFEYGFRLTSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLR 120

Query: 121 DLVEQPMVLGQQEPTGANERDK--GGDREVFAMENRKSRKETSALVGRSSWNMENGGLYL 180
           DLVEQPMVLGQ+E TG +E+D   GGDREVF+ ENRKSRKET ALVGR+S  MEN GLYL
Sbjct: 121 DLVEQPMVLGQREDTGVDEKDSYLGGDREVFSRENRKSRKETRALVGRTS--MENEGLYL 180

Query: 181 KMGFPNSIGTRTKKKKKNNNNDSGMRMEVA 208
           KMGFP SIGT T+KKKK N++   M  +V+
Sbjct: 181 KMGFPKSIGTTTRKKKKKNDSSLNMSAKVS 203

[Close]

BLAST of Cp4.1LG06g07800 vs. NCBI nr
Match: gi|700192533|gb|KGN47737.1| (hypothetical protein Csa_6G397170 [Cucumis sativus])

HSP 1 Score: 300.4 bits (768), Expect = 2.6e-78
Identity = 159/210 (75.71%), Postives = 177/210 (84.29%), Query Frame = 1


Query: 1   MLGSSRKLLSSPTESPDFRAFDA-MDFGSPASTRSRSSSRPALNHDIFRSWNGKQIHLKD 60
           M+GS+RKLLSSPTESPDFRA +  M+F SP       SSRPALNHDIFRSWNGKQIHL+D
Sbjct: 1   MIGSTRKLLSSPTESPDFRALNTTMEFSSPTR-----SSRPALNHDIFRSWNGKQIHLRD 60

Query: 61  DETVEYGFRLSSPQRSPQFYRSNYQSLSPPSKALAIATGQKELMELVNNMPESCYELSLR 120
           D   EYGFRL+SPQRSPQFYRSNY +LSPPSKALAIATGQKELME+VNNMPESCYELSLR
Sbjct: 61  DHPFEYGFRLTSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLR 120

Query: 121 DLVEQPMVLGQQEPTGANERDK--GGDREVFAMENRKSRKETSALVGRSSWNMENGGLYL 180
           DLVEQPMVLGQ+E TG +E+D   GGDREVF+ ENRKSRKET ALVGR+S  MEN GLYL
Sbjct: 121 DLVEQPMVLGQREDTGVDEKDSYLGGDREVFSRENRKSRKETRALVGRTS--MENEGLYL 180

Query: 181 KMGFPNSIGTRTKKKKKNNNNDSGMRMEVA 208
           KMGFP SIGT T+KKKK N++   M  +V+
Sbjct: 181 KMGFPKSIGTTTRKKKKKNDSSLNMSAKVS 203

[Close]

BLAST of Cp4.1LG06g07800 vs. NCBI nr
Match: gi|1009141968|ref|XP_015888469.1| (PREDICTED: probable serine/threonine-protein kinase ndrD [Ziziphus jujuba])

HSP 1 Score: 113.6 bits (283), Expect = 4.5e-22
Identity = 75/183 (40.98%), Postives = 106/183 (57.92%), Query Frame = 1


Query: 39  RPALNHDIFRSWNGKQIHLKDDETVEYG--------FRLSSPQRSPQFYRSNYQSLSPPS 98
           R + NH  + S NG     ++++  E+         +R SSP RSPQ  +++Y+SLSP S
Sbjct: 41  RTSQNHSNYGSRNGIDWGYREEKNDEHESGVCSPPLWRTSSPPRSPQHRKNHYRSLSPAS 100

Query: 99  KALAIATGQKELMELVNNMPESCYELSLRDLVEQPMVLGQQEPTGANERDKGGDREVFAM 158
           +A AIA GQ ELME+V NMPE+CYELSLRDLVE PM L +Q+   + ER+ GG+    A 
Sbjct: 101 RAQAIARGQNELMEMVRNMPETCYELSLRDLVEHPMALARQQSM-SEERNLGGENLFRAE 160

Query: 159 ENRKSR---------------KETSALVGRSSWNMENGGLYLKMGFPNSIGTRTKKKKKN 199
           +N  +                + T+    RSS+  +NGG  LKM FP +I ++TKK  K 
Sbjct: 161 DNNSNNHHNNNNNNKRRISIDRNTTERKLRSSF--DNGGFLLKMVFPVTIRSKTKKTMKR 220

[Close]

BLAST of Cp4.1LG06g07800 vs. NCBI nr
Match: gi|224085037|ref|XP_002307467.1| (hypothetical protein POPTR_0005s20730g [Populus trichocarpa])

HSP 1 Score: 111.7 bits (278), Expect = 1.7e-21
Identity = 83/206 (40.29%), Postives = 112/206 (54.37%), Query Frame = 1


Query: 8   LLSSPTESPDFRAFDAMDFGSPASTRSRSSSRP-ALNHDIFRSWNGKQI---HLKDDETV 67
           +L+  TESPD +      + S         SR  A N+  ++ WN   I     KD +  
Sbjct: 1   MLNPGTESPDDQVHSGDRYNSNGILSYGVLSRKTADNYGNYQGWNSMGIFGAQRKDVQAE 60

Query: 68  EYG-----FRLSSPQRSPQFYRSNYQSLSPPSKALAIATGQKELMELVNNMPESCYELSL 127
           E G        +SP RSPQ  +++Y+SLSP S+  AIA GQKELME+V+ MPE CYELSL
Sbjct: 61  ESGVCSPPLWRTSPPRSPQHRQNHYRSLSPSSRTQAIARGQKELMEMVSRMPEGCYELSL 120

Query: 128 RDLVEQPMVLGQ-QEPTGANERD--KGGDREVFAMENRKSRK----ETSALVGRSSWNME 187
           RD+VEQPMV+   +E + + +R     GD  +   E  K +K    E    + RS  ++ 
Sbjct: 121 RDIVEQPMVVADAKEESFSEDRSIINQGDMHILRREQEKKKKKKKIEKKVHMNRSGSSI- 180

Query: 188 NGGLYLKMGFPNSIGTRTKKKKKNNN 198
           N G  LKM FP S G+R KKK  N+N
Sbjct: 181 NEGFLLKMVFPISFGSRKKKKNSNSN 205

The following BLAST results are available for this feature:

BLAST of Cp4.1LG06g07800 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG06g07800 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KH64_CUCSA	1.8e-78	75.71	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G397170 PE=4 SV=1	[more]
B9H7L2_POPTR	1.2e-21	40.29	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s20730g PE=4 SV=1	[more]
A5C140_VITVI	2.2e-20	36.84	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_018084 PE=4 SV=1	[more]
A0A067LEZ8_JATCU	5.0e-20	47.01	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25276 PE=4 SV=1	[more]
F6GZT7_VITVI	6.5e-20	39.18	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g14950 PE=4 SV=...	[more]

BLAST of Cp4.1LG06g07800 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G76980.1	6.0e-17	40.00	BEST Arabidopsis thaliana protein match is: embryo defective 2170 (T...	[more]
AT1G21390.1	5.1e-16	43.48	embryo defective 2170	[more]

BLAST of Cp4.1LG06g07800 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659133347\|ref\|XP_008466690.1\|	5.2e-79	76.19	PREDICTED: uncharacterized protein LOC103504041 [Cucumis melo]	[more]
gi\|449458095\|ref\|XP_004146783.1\|	2.6e-78	75.71	PREDICTED: uncharacterized protein LOC101215856 [Cucumis sativus]	[more]
gi\|700192533\|gb\|KGN47737.1\|	2.6e-78	75.71	hypothetical protein Csa_6G397170 [Cucumis sativus]	[more]
gi\|1009141968\|ref\|XP_015888469.1\|	4.5e-22	40.98	PREDICTED: probable serine/threonine-protein kinase ndrD [Ziziphus jujuba]	[more]
gi\|224085037\|ref\|XP_002307467.1\|	1.7e-21	40.29	hypothetical protein POPTR_0005s20730g [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG06g07800.1	Cp4.1LG06g07800.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34193	FAMILY NOT NAMED	coord: 71..200 score: 1.8
None	No IPR available	PANTHER	PTHR34193:SF1	SUBFAMILY NOT NAMED	coord: 71..200 score: 1.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG06g07800	Cucsa.077240	Cucumber (Gy14) v1	cgycpeB0129
Cp4.1LG06g07800	CmaCh09G010710	Cucurbita maxima (Rimu)	cmacpeB060
Cp4.1LG06g07800	CmaCh15G006390	Cucurbita maxima (Rimu)	cmacpeB335
Cp4.1LG06g07800	CmaCh04G024100	Cucurbita maxima (Rimu)	cmacpeB754
Cp4.1LG06g07800	CmoCh15G006490	Cucurbita moschata (Rifu)	cmocpeB299
Cp4.1LG06g07800	CmoCh09G010790	Cucurbita moschata (Rifu)	cmocpeB034
Cp4.1LG06g07800	Cla013881	Watermelon (97103) v1	cpewmB757
Cp4.1LG06g07800	Csa6G397170	Cucumber (Chinese Long) v2	cpecuB796
Cp4.1LG06g07800	Csa6G349820	Cucumber (Chinese Long) v2	cpecuB795
Cp4.1LG06g07800	MELO3C008433	Melon (DHL92) v3.5.1	cpemeB723
Cp4.1LG06g07800	MELO3C010580	Melon (DHL92) v3.5.1	cpemeB720
Cp4.1LG06g07800	ClCG08G006250	Watermelon (Charleston Gray)	cpewcgB710
Cp4.1LG06g07800	CSPI06G18290	Wild cucumber (PI 183967)	cpecpiB794
Cp4.1LG06g07800	CSPI06G20540	Wild cucumber (PI 183967)	cpecpiB795
Cp4.1LG06g07800	Lsi08G002810	Bottle gourd (USVL1VR-Ls)	cpelsiB646
Cp4.1LG06g07800	Lsi08G005060	Bottle gourd (USVL1VR-Ls)	cpelsiB648
Cp4.1LG06g07800	MELO3C008433.2	Melon (DHL92) v3.6.1	cpemedB858
Cp4.1LG06g07800	MELO3C010580.2	Melon (DHL92) v3.6.1	cpemedB855
Cp4.1LG06g07800	CsaV3_6G035580	Cucumber (Chinese Long) v3	cpecucB0986
Cp4.1LG06g07800	Bhi04G001443	Wax gourd	cpewgoB0984
Cp4.1LG06g07800	Bhi04G001704	Wax gourd	cpewgoB0983
Cp4.1LG06g07800	CsGy6G019980	Cucumber (Gy14) v2	cgybcpeB872
Cp4.1LG06g07800	Carg15757	Silver-seed gourd	carcpeB0097

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG06g07800	Cp4.1LG13g04230	Cucurbita pepo (Zucchini)	cpecpeB228
Cp4.1LG06g07800	Cp4.1LG01g20850	Cucurbita pepo (Zucchini)	cpecpeB404

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG06g07800	Cucurbita pepo (Zucchini)	cpecpeB460
Cp4.1LG06g07800	Cucurbita maxima (Rimu)	cmacpeB508
Cp4.1LG06g07800	Cucurbita moschata (Rifu)	cmocpeB464
Cp4.1LG06g07800	Cucurbita moschata (Rifu)	cmocpeB708
Cp4.1LG06g07800	Silver-seed gourd	carcpeB0856
Cp4.1LG06g07800	Silver-seed gourd	carcpeB1161