Cucsa.077240 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCACCACAAACAAACCCCATTTCCTACCATTTCCTCCTCTCTCCCCCAAAATTCTTTCCTCCACATTTCCCACACCAAAATCCAAACCCCATGGGCGATATCAACACCAAATTACCACCAAAACCCGATTCCTATTATAAATCTCCAGAACACAACTCCGAAGATTGCATCATTTTCAGAGGCTGGGACAGTGCTGCTGCAATCGACGATGACTCTCAATCCGAATCAGGCGTTTCTTCACCCACCCTTTGGGCTTCCAATTCTCGAACCACCCCCCAATTTCACCACCGCCATCGTAATCGTAGCCTTTCCCCAACTTCCCGAACCCAAGCCATAGCCAGAGGCCAACAGGAGCTCATGGAGATGGTTCGTAATATGCCCGAATCATCTTACGAGCTCTCCCTCAAAGATCTTGTTGAACATCACTTGACTAATTCGAAGCGCCAACAAGATGGTGATGTTGCTTCGCTTACAAGAGACGATTCCAGCTCTGAAACTTCCTTCCGAAGAGACCCTAGCAAAAACAGAGGTGAAACTAGGGCACTTGTTACCAGAAGTAGAAGCGTCGATAGCGGTGGGTTTTATCTCAAAATGTTCTTCCCACTGCCTTTTGGGCAAGTTTCGGCCAAAAAGAAGAATAATCTTAGAACTGATTCTGGATTGAGTGGTAGCTCGAGAGTTTCGCCTAAGCCACCGCCGGTGGATAAAGATTGGTGGAGGAAGAGATCGTCGGTATCGGGCGGTGAAAACGACGGTAGTATCTCCGGTGGAAGTATGACGAGTAGCGGTAGTAGTAATAGTACTAGCAGCGAAAGAAGCAACAGCAGGTAAAATCAAACAAATTTAGATGAATTGAATTGATGAGCCCAAATTTTAAAAaCCCAATTTCGAATTGAAATGTCAGCCAATAATTGTTTGTTTGTTGGAATTTTTTATAACAATCTGAATGTTGGATTTGTAATCTTACTTGTTTTtCTTTTTGGCTTTATATGATGAATGAGTTATGATGATGAATAGCAATTAGGCAAATAGAGGGCAATAATTAAAGAGTTTTGACTTTGTTTGTTTGATTCTGATATGGATTTGATGAACAGGAACTCTGAATCGCAAGGAAGTTGCTGGTTTTGTATTAGTCCAATGAGAAGTAAAGATCGAGAGTAAAACAACAGCTTCATCGGAGACGGAGTATTCAAATGAAATGAATCTTATATATACTTAATATGTAATCTCCTTTGAATAATGTTTTG CCACCACAAACAAACCCCATTTCCTACCATTTCCTCCTCTCTCCCCCAAAATTCTTTCCTCCACATTTCCCACACCAAAATCCAAACCCCATGGGCGATATCAACACCAAATTACCACCAAAACCCGATTCCTATTATAAATCTCCAGAACACAACTCCGAAGATTGCATCATTTTCAGAGGCTGGGACAGTGCTGCTGCAATCGACGATGACTCTCAATCCGAATCAGGCGTTTCTTCACCCACCCTTTGGGCTTCCAATTCTCGAACCACCCCCCAATTTCACCACCGCCATCGTAATCGTAGCCTTTCCCCAACTTCCCGAACCCAAGCCATAGCCAGAGGCCAACAGGAGCTCATGGAGATGGTTCGTAATATGCCCGAATCATCTTACGAGCTCTCCCTCAAAGATCTTGTTGAACATCACTTGACTAATTCGAAGCGCCAACAAGATGGTGATGTTGCTTCGCTTACAAGAGACGATTCCAGCTCTGAAACTTCCTTCCGAAGAGACCCTAGCAAAAACAGAGGTGAAACTAGGGCACTTGTTACCAGAAGTAGAAGCGTCGATAGCGGTGGGTTTTATCTCAAAATGTTCTTCCCACTGCCTTTTGGGCAAGTTTCGGCCAAAAAGAAGAATAATCTTAGAACTGATTCTGGATTGAGTGGTAGCTCGAGAGTTTCGCCTAAGCCACCGCCGGTGGATAAAGATTGGTGGAGGAAGAGATCGTCGGTATCGGGCGGTGAAAACGACGGTAGTATCTCCGGTGGAAGTATGACGAGTAGCGGTAGTAGTAATAGTACTAGCAGCGAAAGAAGCAACAGCAGGAACTCTGAATCGCAAGGAAGTTGCTGGTTTTGTATTAGTCCAATGAGAAGTAAAGATCGAGAGTAAAACAACAGCTTCATCGGAGACGGAGTATTCAAATGAAATGAATCTTATATATACTTAATATGTAATCTCCTTTGAATAATGTTTTG ATGGGCGATATCAACACCAAATTACCACCAAAACCCGATTCCTATTATAAATCTCCAGAACACAACTCCGAAGATTGCATCATTTTCAGAGGCTGGGACAGTGCTGCTGCAATCGACGATGACTCTCAATCCGAATCAGGCGTTTCTTCACCCACCCTTTGGGCTTCCAATTCTCGAACCACCCCCCAATTTCACCACCGCCATCGTAATCGTAGCCTTTCCCCAACTTCCCGAACCCAAGCCATAGCCAGAGGCCAACAGGAGCTCATGGAGATGGTTCGTAATATGCCCGAATCATCTTACGAGCTCTCCCTCAAAGATCTTGTTGAACATCACTTGACTAATTCGAAGCGCCAACAAGATGGTGATGTTGCTTCGCTTACAAGAGACGATTCCAGCTCTGAAACTTCCTTCCGAAGAGACCCTAGCAAAAACAGAGGTGAAACTAGGGCACTTGTTACCAGAAGTAGAAGCGTCGATAGCGGTGGGTTTTATCTCAAAATGTTCTTCCCACTGCCTTTTGGGCAAGTTTCGGCCAAAAAGAAGAATAATCTTAGAACTGATTCTGGATTGAGTGGTAGCTCGAGAGTTTCGCCTAAGCCACCGCCGGTGGATAAAGATTGGTGGAGGAAGAGATCGTCGGTATCGGGCGGTGAAAACGACGGTAGTATCTCCGGTGGAAGTATGACGAGTAGCGGTAGTAGTAATAGTACTAGCAGCGAAAGAAGCAACAGCAGGAACTCTGAATCGCAAGGAAGTTGCTGGTTTTGTATTAGTCCAATGAGAAGTAAAGATCGAGAGTAA MGDINTKLPPKPDSYYKSPEHNSEDCIIFRGWDSAAAIDDDSQSESGVSSPTLWASNSRTTPQFHHRHRNRSLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKDLVEHHLTNSKRQQDGDVASLTRDDSSSETSFRRDPSKNRGETRALVTRSRSVDSGGFYLKMFFPLPFGQVSAKKKNNLRTDSGLSGSSRVSPKPPPVDKDWWRKRSSVSGGENDGSISGGSMTSSGSSNSTSSERSNSRNSESQGSCWFCISPMRSKDRE*
BLAST of Cucsa.077240 vs. TrEMBL
Match: A0A0A0KCW4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G349820 PE=4 SV=1) HSP 1 Score: 543.9 bits (1400), Expect = 1.1e-151 Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 1
BLAST of Cucsa.077240 vs. TrEMBL
Match: I1MAA6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_14G158800 PE=4 SV=1) HSP 1 Score: 181.4 bits (459), Expect = 1.4e-42 Identity = 111/252 (44.05%), Postives = 149/252 (59.13%), Query Frame = 1
BLAST of Cucsa.077240 vs. TrEMBL
Match: A0A0B2P8W9_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_046099 PE=4 SV=1) HSP 1 Score: 181.4 bits (459), Expect = 1.4e-42 Identity = 111/252 (44.05%), Postives = 149/252 (59.13%), Query Frame = 1
BLAST of Cucsa.077240 vs. TrEMBL
Match: A0A0S3RNR8_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.03G214700 PE=4 SV=1) HSP 1 Score: 180.3 bits (456), Expect = 3.2e-42 Identity = 120/266 (45.11%), Postives = 152/266 (57.14%), Query Frame = 1
BLAST of Cucsa.077240 vs. TrEMBL
Match: I1LXC1_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_13G036100 PE=4 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 1.0e-40 Identity = 108/233 (46.35%), Postives = 144/233 (61.80%), Query Frame = 1
BLAST of Cucsa.077240 vs. TAIR10
Match: AT1G21390.1 (AT1G21390.1 embryo defective 2170) HSP 1 Score: 119.8 bits (299), Expect = 2.6e-27 Identity = 84/225 (37.33%), Postives = 112/225 (49.78%), Query Frame = 1
BLAST of Cucsa.077240 vs. TAIR10
Match: AT1G76980.1 (AT1G76980.1 BEST Arabidopsis thaliana protein match is: embryo defective 2170 (TAIR:AT1G21390.1)) HSP 1 Score: 113.6 bits (283), Expect = 1.9e-25 Identity = 86/225 (38.22%), Postives = 116/225 (51.56%), Query Frame = 1
BLAST of Cucsa.077240 vs. NCBI nr
Match: gi|449453013|ref|XP_004144253.1| (PREDICTED: uncharacterized protein LOC101219576 [Cucumis sativus]) HSP 1 Score: 543.9 bits (1400), Expect = 1.6e-151 Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 1
BLAST of Cucsa.077240 vs. NCBI nr
Match: gi|659081933|ref|XP_008441584.1| (PREDICTED: uncharacterized protein LOC103485667 [Cucumis melo]) HSP 1 Score: 523.9 bits (1348), Expect = 1.7e-145 Identity = 263/272 (96.69%), Postives = 264/272 (97.06%), Query Frame = 1
BLAST of Cucsa.077240 vs. NCBI nr
Match: gi|951059060|ref|XP_014522319.1| (PREDICTED: uncharacterized protein LOC106778838 [Vigna radiata var. radiata]) HSP 1 Score: 184.1 bits (466), Expect = 3.2e-43 Identity = 110/247 (44.53%), Postives = 144/247 (58.30%), Query Frame = 1
BLAST of Cucsa.077240 vs. NCBI nr
Match: gi|571510253|ref|XP_006596250.1| (PREDICTED: uncharacterized protein LOC100792746 [Glycine max]) HSP 1 Score: 181.4 bits (459), Expect = 2.1e-42 Identity = 111/252 (44.05%), Postives = 149/252 (59.13%), Query Frame = 1
BLAST of Cucsa.077240 vs. NCBI nr
Match: gi|965666689|dbj|BAT82177.1| (hypothetical protein VIGAN_03214700 [Vigna angularis var. angularis]) HSP 1 Score: 180.3 bits (456), Expect = 4.6e-42 Identity = 120/266 (45.11%), Postives = 152/266 (57.14%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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