CSPI06G18290 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI06G18290
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	embryo defective 2170
Location	Chr6 : 16642074 .. 16643457 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAATTACAAATATCTCCCTCTCCTCTCTCCTCTATACCCACCTCTCTCCTCTCTGGCTTCAAACCCACCACAAACAAACCCCATTTCCTACCATTTCCTCCTCTCTCCCCCAAAATTCTTTCCTCCACATTTCCTACACCAAAATCCAAACCCCATGGGCGATATCAACACCAAATTACCACCAAAACCTGATTCCTATTATAAATCTCCAGAACACAACTCCGAAGATTGCATCATTTTCAGAGGCTGGGACAGTGCTGCTGCAATCGACGATGACTCTCAATCCGAATCAGGCGTTTCTTCACCCACCCTTTGGGCTTCCAATTCTCGAACCACCCCCCAATTTCACCACCGCCATCGTAATCGTAGCCTTTCCCCAACTTCCCGAACCCAAGCCATAGCCAGAGGCCAACAGGAGCTCATGGAGATGGTTCGTAATATGCCCGAATCATCTTACGAGCTCTCCCTCAAAGATCTTGTTGAACATCACTTGACTAATTCGAAGCGCCAACAAGATGGTGATGTTGCTTCGCTTACAAGAGACGATTCTAGCTCTGAAACTTCCTTCCGAAGAGACCCTAGCAAAAACAGAGGTGAAACTAGGGCACTTGTTACCAGAAGTAGAAGCGTCGATAGCGGTGGGTTTTATCTCAAAATGTTCTTCCCACTGCCTTTTGGGCAAGTTTCGGCCAAAAAGAAGAATAATCTTAGAACTGATTCTGGATTGAGTGGTAGCTCGAGAGTTTCGCCTAAGCCACCGCCGGTGGATAAAGATTGGTGGAGGAAGAGATCGTCGGTATCGGGCGGTGAAAACGACGGTAGTATCTCCGGTGGAAGTATGACGAGTAGCGGTAGTAGTAATAGTACTAGCAGCGAAAGAAGCAACAGCAGGTAAAATCAAACAAATTTAGATGAATTGAATTGATGAGCCCAAATTTTAAAAACCCAATTTCGAATTGAAATGGTCAGCCAATAATTGTTTGTTTGTTGGAGTTTTTTATAACAATCTGAATGTTGGATTTGTAATCTTACTTGTTTTTCTTTTTGGCTTTATATGATGAATGAGTTATGATGATGAATAGCAATTAGACAAATAGAGGGCAATAATTAAAGAGTTTTGACTTTGTTTGTTTGATTCTGATATGGATTTGATGAACAGGAACTCTGAATCGCAAGGAAGTTGCTGGTTTTGTATTAGTCCAATGAGAAGTAAAGATCGAGAGTAAAACAACAGCTTCATCGGAGACGGAGTATTCAAATGAAATGAATCTTATATATACTTAATATGTAATCTCCTTTGAATAATGTTTTGGTATAATTCCCACTAAATCACAGCTGAATTTTGCAGCTAAGCTTGTTTATATTTTTTCTTTTATTTTCTA

mRNA sequence

ATGGGCGATATCAACACCAAATTACCACCAAAACCTGATTCCTATTATAAATCTCCAGAACACAACTCCGAAGATTGCATCATTTTCAGAGGCTGGGACAGTGCTGCTGCAATCGACGATGACTCTCAATCCGAATCAGGCGTTTCTTCACCCACCCTTTGGGCTTCCAATTCTCGAACCACCCCCCAATTTCACCACCGCCATCGTAATCGTAGCCTTTCCCCAACTTCCCGAACCCAAGCCATAGCCAGAGGCCAACAGGAGCTCATGGAGATGGTTCGTAATATGCCCGAATCATCTTACGAGCTCTCCCTCAAAGATCTTGTTGAACATCACTTGACTAATTCGAAGCGCCAACAAGATGGTGATGTTGCTTCGCTTACAAGAGACGATTCTAGCTCTGAAACTTCCTTCCGAAGAGACCCTAGCAAAAACAGAGGTGAAACTAGGGCACTTGTTACCAGAAGTAGAAGCGTCGATAGCGGTGGGTTTTATCTCAAAATGTTCTTCCCACTGCCTTTTGGGCAAGTTTCGGCCAAAAAGAAGAATAATCTTAGAACTGATTCTGGATTGAGTGGTAGCTCGAGAGTTTCGCCTAAGCCACCGCCGGTGGATAAAGATTGGTGGAGGAAGAGATCGTCGGTATCGGGCGGTGAAAACGACGGTAGTATCTCCGGTGGAAGTATGACGAGTAGCGGTAGTAGTAATAGTACTAGCAGCGAAAGAAGCAACAGCAGGAACTCTGAATCGCAAGGAAGTTGCTGGTTTTGTATTAGTCCAATGAGAAGTAAAGATCGAGAGTAA

Coding sequence (CDS)

ATGGGCGATATCAACACCAAATTACCACCAAAACCTGATTCCTATTATAAATCTCCAGAACACAACTCCGAAGATTGCATCATTTTCAGAGGCTGGGACAGTGCTGCTGCAATCGACGATGACTCTCAATCCGAATCAGGCGTTTCTTCACCCACCCTTTGGGCTTCCAATTCTCGAACCACCCCCCAATTTCACCACCGCCATCGTAATCGTAGCCTTTCCCCAACTTCCCGAACCCAAGCCATAGCCAGAGGCCAACAGGAGCTCATGGAGATGGTTCGTAATATGCCCGAATCATCTTACGAGCTCTCCCTCAAAGATCTTGTTGAACATCACTTGACTAATTCGAAGCGCCAACAAGATGGTGATGTTGCTTCGCTTACAAGAGACGATTCTAGCTCTGAAACTTCCTTCCGAAGAGACCCTAGCAAAAACAGAGGTGAAACTAGGGCACTTGTTACCAGAAGTAGAAGCGTCGATAGCGGTGGGTTTTATCTCAAAATGTTCTTCCCACTGCCTTTTGGGCAAGTTTCGGCCAAAAAGAAGAATAATCTTAGAACTGATTCTGGATTGAGTGGTAGCTCGAGAGTTTCGCCTAAGCCACCGCCGGTGGATAAAGATTGGTGGAGGAAGAGATCGTCGGTATCGGGCGGTGAAAACGACGGTAGTATCTCCGGTGGAAGTATGACGAGTAGCGGTAGTAGTAATAGTACTAGCAGCGAAAGAAGCAACAGCAGGAACTCTGAATCGCAAGGAAGTTGCTGGTTTTGTATTAGTCCAATGAGAAGTAAAGATCGAGAGTAA

Homology

[Close]

BLAST of CSPI06G18290 vs. TrEMBL
Match: A0A0A0KCW4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G349820 PE=4 SV=1)

HSP 1 Score: 519.6 bits (1337), Expect = 2.2e-144
Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 1


Query: 1   MGDINTKLPPKPDSYYKSPEHNSEDCIIFRGWDSAAAIDDDSQSESGVSSPTLWASNSRT 60
           MGDINTKLPPKPDSYYKSPEHNSEDCIIFRGWDSAAAIDDDSQSESGVSSPTLWASNSRT
Sbjct: 1   MGDINTKLPPKPDSYYKSPEHNSEDCIIFRGWDSAAAIDDDSQSESGVSSPTLWASNSRT 60

Query: 61  TPQFHHRHRNRSLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKDLVEHHLTNSKRQQ 120
           TPQFHHRHRNRSLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKDLVEHHLTNSKRQQ
Sbjct: 61  TPQFHHRHRNRSLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKDLVEHHLTNSKRQQ 120

Query: 121 DGDVASLTRDDSSSETSFRRDPSKNRGETRALVTRSRSVDSGGFYLKMFFPLPFGQVSAK 180
           DGDVASLTRDDSSSETSFRRDPSKNRGETRALVTRSRSVDSGGFYLKMFFPLPFGQVSAK
Sbjct: 121 DGDVASLTRDDSSSETSFRRDPSKNRGETRALVTRSRSVDSGGFYLKMFFPLPFGQVSAK 180

Query: 181 KKNNLRTDSGLSGSSRVSPKPPPVDKDWWRKRSSVSGGENDGSISGGSMTSSGSSNSTSS 240
           KKNNLRTDSGLSGSSRVSPKPPPVDKDWWRKRSSVSGGENDGSISGGSMTSSGSSNSTSS
Sbjct: 181 KKNNLRTDSGLSGSSRVSPKPPPVDKDWWRKRSSVSGGENDGSISGGSMTSSGSSNSTSS 240

Query: 241 ERSNSRNSESQGSCWFCISPMRSKDRE 268
           ERSNSRNSESQGSCWFCISPMRSKDRE
Sbjct: 241 ERSNSRNSESQGSCWFCISPMRSKDRE 267

[Close]

BLAST of CSPI06G18290 vs. TrEMBL
Match: A0A0B2P8W9_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_046099 PE=4 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 5.0e-35
Identity = 111/252 (44.05%), Postives = 149/252 (59.13%), Query Frame = 1


Query: 17  KSPEHNSEDCIIFRGWD----SAAAIDDDSQSESGVSSPTLWASNSRTTPQFHHRHRNRS 76
           K P  N ++C  +   +    + + +DD+   ESG+ SP LW +N   +P  H ++  R 
Sbjct: 40  KKPPKNYKNCHSYNDMEVQLGTGSKVDDN---ESGICSPPLWTTNPPKSPH-HRKNYYRC 99

Query: 77  LSPTSRTQAIARGQQELMEMVRNMPESSYELSLKDLVEHHLTNSKRQQDGDVASLTRDDS 136
           LSP S+TQAIARGQ+ELMEMV+NMPESSYELSLKDLVEH      +++    A   +   
Sbjct: 100 LSPASKTQAIARGQRELMEMVKNMPESSYELSLKDLVEHPRVEVAQEKG---AEERKKLG 159

Query: 137 SSETSFRRDPSKNRGETRALVTRSRSVDSGGFYLKMFFPLPFGQVSAKKKNNLRTDSGLS 196
           +     R+    N+   +  V RS ++DSGGFYLKM FP+  G     K  +L      S
Sbjct: 160 NKNVGNRKKVDMNK---KGQVKRSGNIDSGGFYLKMVFPISLGFKKKTKNESLVN----S 219

Query: 197 GSSRVSPK------PPPVDKDWWRKRSSVSGGEND---GSISGGSMTSSGSSNSTSSERS 256
           GS++VSP+         +DK+WW+K  S SGGE+D    SI+ GS  SSGSSNS+SS RS
Sbjct: 220 GSNKVSPRTSVSDGSKSLDKEWWKKSLSASGGESDSGVSSINSGSKKSSGSSNSSSSSRS 277

[Close]

BLAST of CSPI06G18290 vs. TrEMBL
Match: I1MAA6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_14G158800 PE=4 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 5.0e-35
Identity = 111/252 (44.05%), Postives = 149/252 (59.13%), Query Frame = 1


Query: 17  KSPEHNSEDCIIFRGWD----SAAAIDDDSQSESGVSSPTLWASNSRTTPQFHHRHRNRS 76
           K P  N ++C  +   +    + + +DD+   ESG+ SP LW +N   +P  H ++  R 
Sbjct: 40  KKPPKNYKNCHSYNDMEVQLGTGSKVDDN---ESGICSPPLWTTNPPKSPH-HRKNYYRC 99

Query: 77  LSPTSRTQAIARGQQELMEMVRNMPESSYELSLKDLVEHHLTNSKRQQDGDVASLTRDDS 136
           LSP S+TQAIARGQ+ELMEMV+NMPESSYELSLKDLVEH      +++    A   +   
Sbjct: 100 LSPASKTQAIARGQRELMEMVKNMPESSYELSLKDLVEHPRVEVAQEKG---AEERKKLG 159

Query: 137 SSETSFRRDPSKNRGETRALVTRSRSVDSGGFYLKMFFPLPFGQVSAKKKNNLRTDSGLS 196
           +     R+    N+   +  V RS ++DSGGFYLKM FP+  G     K  +L      S
Sbjct: 160 NKNVGNRKKVDMNK---KGQVKRSGNIDSGGFYLKMVFPISLGFKKKTKNESLVN----S 219

Query: 197 GSSRVSPK------PPPVDKDWWRKRSSVSGGEND---GSISGGSMTSSGSSNSTSSERS 256
           GS++VSP+         +DK+WW+K  S SGGE+D    SI+ GS  SSGSSNS+SS RS
Sbjct: 220 GSNKVSPRTSVSDGSKSLDKEWWKKSLSASGGESDSGVSSINSGSKKSSGSSNSSSSSRS 277

[Close]

BLAST of CSPI06G18290 vs. TrEMBL
Match: A0A0S3RNR8_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.03G214700 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 6.5e-35
Identity = 120/266 (45.11%), Postives = 152/266 (57.14%), Query Frame = 1


Query: 2   GDINTKLPP--KPDSYYKSPEHNSEDCIIFRGWDSAAAIDDDSQSESGVSSPTLWASNSR 61
           G  N+ L P  KP   YK+  H+  D  +  G  + + +DD    ESG+ SP LW+++  
Sbjct: 32  GATNSGLVPSKKPPKNYKNC-HSCNDMEVQFG--TGSKVDD----ESGMCSPPLWSTSPS 91

Query: 62  TTPQFHHRHRNRSLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKDLVEHHLTNSKRQ 121
            +P  H ++  R LSP S+TQAIARGQ+ELMEMV+NMPESSYELSLKDLVEH     +  
Sbjct: 92  KSPH-HRKNHYRCLSPASKTQAIARGQRELMEMVKNMPESSYELSLKDLVEH--PRLEVG 151

Query: 122 QDGDVASLTRDDSSSETSFRRDPSKN----RGETRALVTRSRSVDSGGFYLKMFFPLPFG 181
           Q+  V  +       E   R+  +KN      + +  V RS  +DSGGFYLKM FP+  G
Sbjct: 152 QEKGVKGVKGVKGVEEAEERKLNNKNVHARMVDKKGQVKRSGKIDSGGFYLKMVFPMSLG 211

Query: 182 QVSAKKKNNLRTDSGLSGSSRVS---PKPPPVDKDWWRKRSSVSGGEND---GSISGGSM 241
                K   L  +S    S R S        VDKDWW+K  S SGGE+D    SI+ GSM
Sbjct: 212 SKKKTKNEALVNNSPNKVSPRTSVSDGSAKGVDKDWWKKSLSASGGESDSGVSSINSGSM 271

Query: 242 TSSGSSNSTSSERSNSRNSESQGSCW 256
            SS SSNS+SS RSNSR+  S  SCW
Sbjct: 272 KSSASSNSSSSSRSNSRHEVSGSSCW 287

[Close]

BLAST of CSPI06G18290 vs. TrEMBL
Match: I1LXC1_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_13G036100 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 2.7e-33
Identity = 108/233 (46.35%), Postives = 144/233 (61.80%), Query Frame = 1


Query: 34  SAAAIDDDSQSESGVSSPTLWASNSRTTPQFHHRHRNRSLSPTSRTQAIARGQQELMEMV 93
           + + +DDD   ESG+ SP LW ++   +P     H  R LSP S+TQAIARGQ+ELMEMV
Sbjct: 62  TGSKVDDD---ESGICSPPLWTTSPPKSPHQCKNHY-RCLSPASKTQAIARGQRELMEMV 121

Query: 94  RNMPESSYELSLKDLVEHHLTNSKRQQDGDVASLTRDDSSSETSFRRDPSKNRGETRALV 153
           ++MPESSYELSLKDLVEH       Q+ G        D + ++  + D +  +G+    V
Sbjct: 122 KSMPESSYELSLKDLVEHPRV-EVAQEKGAEERKNLGDKNVDSRKKVDMNIKKGQ----V 181

Query: 154 TRSRSVDSGGFYLKMFFPLPFGQVSAKKKNNLRTDSGLSGSSRVSPK-------PPPVDK 213
            RS ++DSGGFYLKM FP+  G     K  +L      SGS++VSP+          +DK
Sbjct: 182 KRSGNIDSGGFYLKMVFPISLGSKKKTKNESLVN----SGSNKVSPRTSVSDHGSKSLDK 241

Query: 214 DWWRKRS-SVSGGEND---GSISGGSMTSSGSSNSTSSERSNSRNSESQGSCW 256
           +WW+K+S S SGGE+D    SI+ GSM SSGS+NS+SS RSNSR+  +  SCW
Sbjct: 242 EWWKKKSLSGSGGESDSGVSSINSGSMKSSGSNNSSSSSRSNSRHEVNVSSCW 281

[Close]

BLAST of CSPI06G18290 vs. TAIR10
Match: AT1G21390.1 (AT1G21390.1 embryo defective 2170)

HSP 1 Score: 98.2 bits (243), Expect = 8.1e-21
Identity = 84/225 (37.33%), Postives = 112/225 (49.78%), Query Frame = 1


Query: 37  AIDDDSQSESGVSSPTLW-ASNSRTTPQFHHRHRNRSLSPTSRTQAIARGQQELMEMVRN 96
           +I +D  S+SGV SPTLW  S  ++ P FH      SLSP S+ QAIARGQ+ELMEMV  
Sbjct: 18  SIPNDDHSDSGVCSPTLWRTSPPKSPPPFHRPEDYWSLSPDSKAQAIARGQRELMEMVSK 77

Query: 97  MPESSYELSLKDLVEHHLTNSKRQQDGDVASLTRDDSSSETSFRRDPSKNRGETRALVTR 156
           MPES YELSLKDLVE  +     ++  D      +  S          K + + R    R
Sbjct: 78  MPESCYELSLKDLVEVKVNQENERKVFDELPKRANRQSKVV------RKTKSDKRVDPNR 137

Query: 157 SRSVDSGGFYLKMFFPLPFGQV--SAKKKNNLRTDSGLSGSSRVSPKPPPV---DKDWWR 216
           S   ++ GF LK+ F +  G +  + KKK   + D     S R S     V   DK+WW 
Sbjct: 138 SGGGNNSGFLLKIMFLVSLGAMKDTTKKKKKKKKDEACKVSPRPSISEETVKVEDKEWWN 197

Query: 217 KRSSVSGGENDGSISGGSMTSSGSSNSTSSERSNSRNSESQGSCW 256
           +            +S  S   SGSS+S +S RS S   + + SC+
Sbjct: 198 R------------MSESSTKRSGSSSSNNSIRSRSSLRDEKSSCF 224

[Close]

BLAST of CSPI06G18290 vs. TAIR10
Match: AT1G76980.1 (AT1G76980.1 BEST Arabidopsis thaliana protein match is: embryo defective 2170 (TAIR:AT1G21390.1))

HSP 1 Score: 89.4 bits (220), Expect = 3.8e-18
Identity = 86/225 (38.22%), Postives = 116/225 (51.56%), Query Frame = 1


Query: 41  DSQSESGVSSPTLWASNSRTTPQFHHRHRN-RSLSPTSRTQAIARGQQELMEMVRNMPES 100
           D  S+SGV SP LW ++   +P   H H N ++LSP ++ Q IARGQ+ELM+MV  MPES
Sbjct: 22  DDHSDSGVCSPPLWRTSPPKSPA--HLHNNYQNLSPVTKAQVIARGQRELMDMVSKMPES 81

Query: 101 SYELSLKDLVEHHLTNSKRQQDGDVASLTRDDSSSETSFRRDPSKNRGETRALVTRSRSV 160
            YELSLKDLVE    N++ ++  D      +    E   R+   K + +      R+  V
Sbjct: 82  CYELSLKDLVE---VNTEEEKVFD------EMPQREKKPRKVVRKTKSDKWVDPIRNGGV 141

Query: 161 DSGGFYLKMFFPLPFGQVSAKKKNNLRTDSGLSGSSRV-------SPKP-------PPVD 220
           ++ GF LK+ FP+  G   AKKK N + D+    SS         SP+P          D
Sbjct: 142 NNSGFLLKLVFPVSLG---AKKKTNKKKDNDDDDSSVTSKRSWISSPRPSISDLSMKRED 201

Query: 221 KDWWRKRSSVSGGEND--GSISGGSMTSSGSSNSTSSERSNSRNS 249
           KDWW+   S S         I+ GS  SSG S+S S+    SRNS
Sbjct: 202 KDWWKDGLSESRRSQSVVSRINSGSSKSSGGSSSRSNS-DRSRNS 231

[Close]

BLAST of CSPI06G18290 vs. NCBI nr
Match: gi|449453013|ref|XP_004144253.1| (PREDICTED: uncharacterized protein LOC101219576 [Cucumis sativus])

HSP 1 Score: 519.6 bits (1337), Expect = 3.2e-144
Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 1


Query: 1   MGDINTKLPPKPDSYYKSPEHNSEDCIIFRGWDSAAAIDDDSQSESGVSSPTLWASNSRT 60
           MGDINTKLPPKPDSYYKSPEHNSEDCIIFRGWDSAAAIDDDSQSESGVSSPTLWASNSRT
Sbjct: 1   MGDINTKLPPKPDSYYKSPEHNSEDCIIFRGWDSAAAIDDDSQSESGVSSPTLWASNSRT 60

Query: 61  TPQFHHRHRNRSLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKDLVEHHLTNSKRQQ 120
           TPQFHHRHRNRSLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKDLVEHHLTNSKRQQ
Sbjct: 61  TPQFHHRHRNRSLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKDLVEHHLTNSKRQQ 120

Query: 121 DGDVASLTRDDSSSETSFRRDPSKNRGETRALVTRSRSVDSGGFYLKMFFPLPFGQVSAK 180
           DGDVASLTRDDSSSETSFRRDPSKNRGETRALVTRSRSVDSGGFYLKMFFPLPFGQVSAK
Sbjct: 121 DGDVASLTRDDSSSETSFRRDPSKNRGETRALVTRSRSVDSGGFYLKMFFPLPFGQVSAK 180

Query: 181 KKNNLRTDSGLSGSSRVSPKPPPVDKDWWRKRSSVSGGENDGSISGGSMTSSGSSNSTSS 240
           KKNNLRTDSGLSGSSRVSPKPPPVDKDWWRKRSSVSGGENDGSISGGSMTSSGSSNSTSS
Sbjct: 181 KKNNLRTDSGLSGSSRVSPKPPPVDKDWWRKRSSVSGGENDGSISGGSMTSSGSSNSTSS 240

Query: 241 ERSNSRNSESQGSCWFCISPMRSKDRE 268
           ERSNSRNSESQGSCWFCISPMRSKDRE
Sbjct: 241 ERSNSRNSESQGSCWFCISPMRSKDRE 267

[Close]

BLAST of CSPI06G18290 vs. NCBI nr
Match: gi|659081933|ref|XP_008441584.1| (PREDICTED: uncharacterized protein LOC103485667 [Cucumis melo])

HSP 1 Score: 499.6 bits (1285), Expect = 3.4e-138
Identity = 263/272 (96.69%), Postives = 264/272 (97.06%), Query Frame = 1


Query: 1   MGDINTKLPPKP-----DSYYKSPEHNSEDCIIFRGWDSAAAIDDDSQSESGVSSPTLWA 60
           MGDINTK PPKP     DSYYKSPEHNSEDCIIFRGWDSAAAIDDDSQSESGVSSPTLWA
Sbjct: 1   MGDINTKFPPKPIPPNPDSYYKSPEHNSEDCIIFRGWDSAAAIDDDSQSESGVSSPTLWA 60

Query: 61  SNSRTTPQFHHRHRNRSLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKDLVEHHLTN 120
           SNSRTTPQFH RHRNRSLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKDLVEHHLTN
Sbjct: 61  SNSRTTPQFH-RHRNRSLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKDLVEHHLTN 120

Query: 121 SKRQQDGDVASLTRDDSSSETSFRRDPSKNRGETRALVTRSRSVDSGGFYLKMFFPLPFG 180
           SKRQQDG VASL+RDDSSSETSFRRDPSKNRGETRALVTRSRSVDSGGFYLKMFFPLPFG
Sbjct: 121 SKRQQDGAVASLSRDDSSSETSFRRDPSKNRGETRALVTRSRSVDSGGFYLKMFFPLPFG 180

Query: 181 QVSAKKKNNLRTDSGLSGSSRVSPKPPPVDKDWWRKRSSVSGGENDGSISGGSMTSSGSS 240
           QVSAKKKNNLRTDSGLSGSSRVSPKPPPVDKDWWRKRSSVSGGENDGSISGGSMTSSGSS
Sbjct: 181 QVSAKKKNNLRTDSGLSGSSRVSPKPPPVDKDWWRKRSSVSGGENDGSISGGSMTSSGSS 240

Query: 241 NSTSSERSNSRNSESQGSCWFCISPMRSKDRE 268
           NSTSSERSNSRNSESQGSCWFCISPMRSKDRE
Sbjct: 241 NSTSSERSNSRNSESQGSCWFCISPMRSKDRE 271

[Close]

BLAST of CSPI06G18290 vs. NCBI nr
Match: gi|951059060|ref|XP_014522319.1| (PREDICTED: uncharacterized protein LOC106778838 [Vigna radiata var. radiata])

HSP 1 Score: 160.6 bits (405), Expect = 3.8e-36
Identity = 110/247 (44.53%), Postives = 144/247 (58.30%), Query Frame = 1


Query: 32  WDSAAAIDDDSQSESGVSSPTLWASNSRTTPQFHHRHRNRSLSPTSRTQAIARGQQELME 91
           W S   + + +Q +SG+ SP +W     TT   H +  +RSLSPTSRTQAI RGQ+ELME
Sbjct: 35  WPSKPPLQELNQDDSGICSPPMW-----TTSPPHSKTDHRSLSPTSRTQAIVRGQRELME 94

Query: 92  MVRNMPESSYELSLKDLVEHHLTNSKRQQDGDVASLTRDDSSSETSFRRDPS---KNRGE 151
           MV+NMPES+YELSLKDLVEHH   +             +D  + T ++RD S   K    
Sbjct: 95  MVKNMPESNYELSLKDLVEHHRLET-----------AVEDRRNLTVYKRDKSGVGKRVDN 154

Query: 152 TRALVTRSRSVDSGGFYLKMFFPLPFGQVSAKKKNNLRTDSGLSGSSRVSPKPP-----P 211
               V R+R++D GGFYLKM  P   G     K N  +++S  + SSRV+PKP       
Sbjct: 155 KMTQVKRNRNIDRGGFYLKMGLPFSLGSKDKNKSNKKKSESSGNSSSRVTPKPDGSTKGG 214

Query: 212 VDKDWWRKRSSVSGGENDG--SISGGSMTSSGSSNSTSS-ERSNSRNSESQGSCWFCISP 268
           VDK+WW+K  S   G + G  SI+ GS  SSGSS+S SS  RSNSR  +    CWF IS 
Sbjct: 215 VDKEWWKKSPSAYKGSDSGESSINSGSSKSSGSSSSNSSNSRSNSRREKGGRLCWFFISR 265

[Close]

BLAST of CSPI06G18290 vs. NCBI nr
Match: gi|571510253|ref|XP_006596250.1| (PREDICTED: uncharacterized protein LOC100792746 [Glycine max])

HSP 1 Score: 156.4 bits (394), Expect = 7.1e-35
Identity = 111/252 (44.05%), Postives = 149/252 (59.13%), Query Frame = 1


Query: 17  KSPEHNSEDCIIFRGWD----SAAAIDDDSQSESGVSSPTLWASNSRTTPQFHHRHRNRS 76
           K P  N ++C  +   +    + + +DD+   ESG+ SP LW +N   +P  H ++  R 
Sbjct: 40  KKPPKNYKNCHSYNDMEVQLGTGSKVDDN---ESGICSPPLWTTNPPKSPH-HRKNYYRC 99

Query: 77  LSPTSRTQAIARGQQELMEMVRNMPESSYELSLKDLVEHHLTNSKRQQDGDVASLTRDDS 136
           LSP S+TQAIARGQ+ELMEMV+NMPESSYELSLKDLVEH      +++    A   +   
Sbjct: 100 LSPASKTQAIARGQRELMEMVKNMPESSYELSLKDLVEHPRVEVAQEKG---AEERKKLG 159

Query: 137 SSETSFRRDPSKNRGETRALVTRSRSVDSGGFYLKMFFPLPFGQVSAKKKNNLRTDSGLS 196
           +     R+    N+   +  V RS ++DSGGFYLKM FP+  G     K  +L      S
Sbjct: 160 NKNVGNRKKVDMNK---KGQVKRSGNIDSGGFYLKMVFPISLGFKKKTKNESLVN----S 219

Query: 197 GSSRVSPK------PPPVDKDWWRKRSSVSGGEND---GSISGGSMTSSGSSNSTSSERS 256
           GS++VSP+         +DK+WW+K  S SGGE+D    SI+ GS  SSGSSNS+SS RS
Sbjct: 220 GSNKVSPRTSVSDGSKSLDKEWWKKSLSASGGESDSGVSSINSGSKKSSGSSNSSSSSRS 277

[Close]

BLAST of CSPI06G18290 vs. NCBI nr
Match: gi|965666689|dbj|BAT82177.1| (hypothetical protein VIGAN_03214700 [Vigna angularis var. angularis])

HSP 1 Score: 156.0 bits (393), Expect = 9.3e-35
Identity = 120/266 (45.11%), Postives = 152/266 (57.14%), Query Frame = 1


Query: 2   GDINTKLPP--KPDSYYKSPEHNSEDCIIFRGWDSAAAIDDDSQSESGVSSPTLWASNSR 61
           G  N+ L P  KP   YK+  H+  D  +  G  + + +DD    ESG+ SP LW+++  
Sbjct: 32  GATNSGLVPSKKPPKNYKNC-HSCNDMEVQFG--TGSKVDD----ESGMCSPPLWSTSPS 91

Query: 62  TTPQFHHRHRNRSLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKDLVEHHLTNSKRQ 121
            +P  H ++  R LSP S+TQAIARGQ+ELMEMV+NMPESSYELSLKDLVEH     +  
Sbjct: 92  KSPH-HRKNHYRCLSPASKTQAIARGQRELMEMVKNMPESSYELSLKDLVEH--PRLEVG 151

Query: 122 QDGDVASLTRDDSSSETSFRRDPSKN----RGETRALVTRSRSVDSGGFYLKMFFPLPFG 181
           Q+  V  +       E   R+  +KN      + +  V RS  +DSGGFYLKM FP+  G
Sbjct: 152 QEKGVKGVKGVKGVEEAEERKLNNKNVHARMVDKKGQVKRSGKIDSGGFYLKMVFPMSLG 211

Query: 182 QVSAKKKNNLRTDSGLSGSSRVS---PKPPPVDKDWWRKRSSVSGGEND---GSISGGSM 241
                K   L  +S    S R S        VDKDWW+K  S SGGE+D    SI+ GSM
Sbjct: 212 SKKKTKNEALVNNSPNKVSPRTSVSDGSAKGVDKDWWKKSLSASGGESDSGVSSINSGSM 271

Query: 242 TSSGSSNSTSSERSNSRNSESQGSCW 256
            SS SSNS+SS RSNSR+  S  SCW
Sbjct: 272 KSSASSNSSSSSRSNSRHEVSGSSCW 287

The following BLAST results are available for this feature:

BLAST of CSPI06G18290 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI06G18290 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KCW4_CUCSA	2.2e-144	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G349820 PE=4 SV=1	[more]
A0A0B2P8W9_GLYSO	5.0e-35	44.05	Uncharacterized protein OS=Glycine soja GN=glysoja_046099 PE=4 SV=1	[more]
I1MAA6_SOYBN	5.0e-35	44.05	Uncharacterized protein OS=Glycine max GN=GLYMA_14G158800 PE=4 SV=1	[more]
A0A0S3RNR8_PHAAN	6.5e-35	45.11	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.03G214700 PE=...	[more]
I1LXC1_SOYBN	2.7e-33	46.35	Uncharacterized protein OS=Glycine max GN=GLYMA_13G036100 PE=4 SV=1	[more]

BLAST of CSPI06G18290 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G21390.1	8.1e-21	37.33	embryo defective 2170	[more]
AT1G76980.1	3.8e-18	38.22	BEST Arabidopsis thaliana protein match is: embryo defective 2170 (T...	[more]

BLAST of CSPI06G18290 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449453013\|ref\|XP_004144253.1\|	3.2e-144	100.00	PREDICTED: uncharacterized protein LOC101219576 [Cucumis sativus]	[more]
gi\|659081933\|ref\|XP_008441584.1\|	3.4e-138	96.69	PREDICTED: uncharacterized protein LOC103485667 [Cucumis melo]	[more]
gi\|951059060\|ref\|XP_014522319.1\|	3.8e-36	44.53	PREDICTED: uncharacterized protein LOC106778838 [Vigna radiata var. radiata]	[more]
gi\|571510253\|ref\|XP_006596250.1\|	7.1e-35	44.05	PREDICTED: uncharacterized protein LOC100792746 [Glycine max]	[more]
gi\|965666689\|dbj\|BAT82177.1\|	9.3e-35	45.11	hypothetical protein VIGAN_03214700 [Vigna angularis var. angularis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006952	defense response
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0050789	regulation of biological process
biological_process	GO:0044763	single-organism cellular process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005622	intracellular
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G18290.1	CSPI06G18290.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34193	FAMILY NOT NAMED	coord: 17..267 score: 7.8
None	No IPR available	PANTHER	PTHR34193:SF1	SUBFAMILY NOT NAMED	coord: 17..267 score: 7.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI06G18290	Cla013881	Watermelon (97103) v1	cpiwmB483
CSPI06G18290	Csa6G349820	Cucumber (Chinese Long) v2	cpicuB313
CSPI06G18290	MELO3C008433	Melon (DHL92) v3.5.1	cpimeB467
CSPI06G18290	ClCG08G006250	Watermelon (Charleston Gray)	cpiwcgB534
CSPI06G18290	Lsi08G005060	Bottle gourd (USVL1VR-Ls)	cpilsiB490
CSPI06G18290	MELO3C008433.2	Melon (DHL92) v3.6.1	cpimedB459
CSPI06G18290	CsaV3_6G031200	Cucumber (Chinese Long) v3	cpicucB363
CSPI06G18290	Cla97C08G149030	Watermelon (97103) v2	cpiwmbB524
CSPI06G18290	Bhi04G001443	Wax gourd	cpiwgoB578
CSPI06G18290	Cucsa.077240	Cucumber (Gy14) v1	cgycpiB077
CSPI06G18290	CmaCh04G024100	Cucurbita maxima (Rimu)	cmacpiB781
CSPI06G18290	CmaCh09G010710	Cucurbita maxima (Rimu)	cmacpiB038
CSPI06G18290	CmaCh15G006390	Cucurbita maxima (Rimu)	cmacpiB317
CSPI06G18290	CmoCh04G025220	Cucurbita moschata (Rifu)	cmocpiB771
CSPI06G18290	CmoCh15G006490	Cucurbita moschata (Rifu)	cmocpiB308
CSPI06G18290	CmoCh09G010790	Cucurbita moschata (Rifu)	cmocpiB027
CSPI06G18290	Cp4.1LG06g07800	Cucurbita pepo (Zucchini)	cpecpiB794
CSPI06G18290	Cp4.1LG01g20850	Cucurbita pepo (Zucchini)	cpecpiB464
CSPI06G18290	Cp4.1LG13g04230	Cucurbita pepo (Zucchini)	cpecpiB201
CSPI06G18290	CsGy6G017790	Cucumber (Gy14) v2	cgybcpiB287
CSPI06G18290	Carg15757	Silver-seed gourd	carcpiB0071
CSPI06G18290	Carg01567	Silver-seed gourd	carcpiB0872

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI06G18290	Wild cucumber (PI 183967)	cpicpiB166
CSPI06G18290	Melon (DHL92) v3.5.1	cpimeB505
CSPI06G18290	Cucumber (Gy14) v2	cgybcpiB191