Lsi08G005060 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi08G005060
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Descriptionembryo defective 2170
Locationchr08 : 12969938 .. 12971479 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCCACTATACCCACCACTCGCCTCTCTGGCTTCAAACCGTACCACAAACAAACCATTTCAACCATCTCCTCTGTTTCTCTCTCCCAAATTCCTTCCTCCACATTTCCCCAGACCAAAATTCGAAAAAAAAAAAATCCAAATCCATGGACGATATTAGGACGAAATTCCCAAGAAAACCTACCCATATCCCAGATCCTATCCCACGAACAGCCACTTCCTATTATAAATCTCCAGAACATGACTCCACATCCGAAGATTGCATCATTTTCAGAGGCTGGGACAGTGCTGCTGCCGTCGACGATGACTCTCAATCCGAATCCGGGGTTTGTTCACCCACGCTTTGGGCTTCCAATTCTCGAACCAGCCCCCAATTTCACCGCCCCCGTAATCGCAGCCTCTCCCCAACTTCCCGAACCCAAGCCATAGCCAGAGGCCAACAGGAGCTCATGGAGATGGTCAGGAACATGCCCGAATCATCTTACGAGCTTTCTCTCAAAGATCTCGTCGAACATCACTTGACTAATTCGAAACGCCAACAAGACGGTGACGCTACTTCCCTTTCAAGAGACGATTCCAGCTCTGAAACTTCCTTCCGAAGAGACCCTAGCAAGACCCGGAGTGAAACTAGGGCACTCGTTACCAGAAGTAGAAGCGTCGATAACGGTGGATTTTACCTCAAAATGTTCTTCCCACTGCCTTTTGGGCAGGTTTCGGCTAAAAAGAAGAGTAATCTCAGAACCGATTCGGGGTTGAGTGGTAGTTCGAGAGTGTCTCCTAAGCCACCGCCAGTGGACAGAGACTGGTGGAGGAAGAGATCGTCGGTAGCCGGCGGTGAGAACGAGGGTAGTATCTCCGGCGGAAGCATGACGAGTAGCGGCAGTAGTAATAGCACTAGCAGCGAAAGAAGCAATAGCAGGTAAACCAACAAAATTTTGATGAATTGCAATTGATGAGCCCTAATTTTGGCTTGATTTTTATTGAATCCTGACAAAAACCCAATTCCAGAATTGAAAACATTCAATCAACTGACTTAGGAATTGGAATCGTCAGCCAATAATTGTTTGGTGGTTGGAATTTTGGCTAACAGTCTGAATCTTGGATTTGTTATTTCACTTGTTTTTTTTTTGGCTTTATATGATCAATGAATTTTGGTAATTGTGGGTAATAATTCAAGAATTTTGACTTTGTTTATTTGATGTACAGGAATTCTGAATCGCAAGGAAGTTGCTGGTTTTGTATCAGTCCAATGAGAAGTAAAGATCATCGAGAGTAAAACAGCTTCATCGGAGTATTCAAATGAAATGAATCTTAATATGTAATTTCCTTTGAATAATGTTTTGGTATAATTCCCACTTAATCACAGCTGAATTTTGCAGCTAAGCTTGTTTATATCTTTTTGTTTTATTTCTACTTTTTTCCTTTAAAAAACGATTCCTTGTCTTTATCCTCTCTTTCTTCATCTCTATTTTAATTTCCATGTTATATGTATATGTATATGTATGTATGTATATATATATATATATATATATATTGTTAACCAG

mRNA sequence

CTCCACTATACCCACCACTCGCCTCTCTGGCTTCAAACCGTACCACAAACAAACCATTTCAACCATCTCCTCTGTTTCTCTCTCCCAAATTCCTTCCTCCACATTTCCCCAGACCAAAATTCGAAAAAAAAAAAATCCAAATCCATGGACGATATTAGGACGAAATTCCCAAGAAAACCTACCCATATCCCAGATCCTATCCCACGAACAGCCACTTCCTATTATAAATCTCCAGAACATGACTCCACATCCGAAGATTGCATCATTTTCAGAGGCTGGGACAGTGCTGCTGCCGTCGACGATGACTCTCAATCCGAATCCGGGGTTTGTTCACCCACGCTTTGGGCTTCCAATTCTCGAACCAGCCCCCAATTTCACCGCCCCCGTAATCGCAGCCTCTCCCCAACTTCCCGAACCCAAGCCATAGCCAGAGGCCAACAGGAGCTCATGGAGATGGTCAGGAACATGCCCGAATCATCTTACGAGCTTTCTCTCAAAGATCTCGTCGAACATCACTTGACTAATTCGAAACGCCAACAAGACGGTGACGCTACTTCCCTTTCAAGAGACGATTCCAGCTCTGAAACTTCCTTCCGAAGAGACCCTAGCAAGACCCGGAGTGAAACTAGGGCACTCGTTACCAGAAGTAGAAGCGTCGATAACGGTGGATTTTACCTCAAAATGTTCTTCCCACTGCCTTTTGGGCAGGTTTCGGCTAAAAAGAAGAGTAATCTCAGAACCGATTCGGGGTTGAGTGGTAGTTCGAGAGTGTCTCCTAAGCCACCGCCAGTGGACAGAGACTGGTGGAGGAAGAGATCGTCGGTAGCCGGCGGTGAGAACGAGGGTAGTATCTCCGGCGGAAGCATGACGAGTAGCGGCAGTAGTAATAGCACTAGCAGCGAAAGAAGCAATAGCAGGAATTCTGAATCGCAAGGAAGTTGCTGGTTTTGTATCAGTCCAATGAGAAGTAAAGATCATCGAGAGTAAAACAGCTTCATCGGAGTATTCAAATGAAATGAATCTTAATATGTAATTTCCTTTGAATAATGTTTTGGTATAATTCCCACTTAATCACAGCTGAATTTTGCAGCTAAGCTTGTTTATATCTTTTTGTTTTATTTCTACTTTTTTCCTTTAAAAAACGATTCCTTGTCTTTATCCTCTCTTTCTTCATCTCTATTTTAATTTCCATGTTATATGTATATGTATATGTATGTATGTATATATATATATATATATATATATTGTTAACCAG

Coding sequence (CDS)

ATGGACGATATTAGGACGAAATTCCCAAGAAAACCTACCCATATCCCAGATCCTATCCCACGAACAGCCACTTCCTATTATAAATCTCCAGAACATGACTCCACATCCGAAGATTGCATCATTTTCAGAGGCTGGGACAGTGCTGCTGCCGTCGACGATGACTCTCAATCCGAATCCGGGGTTTGTTCACCCACGCTTTGGGCTTCCAATTCTCGAACCAGCCCCCAATTTCACCGCCCCCGTAATCGCAGCCTCTCCCCAACTTCCCGAACCCAAGCCATAGCCAGAGGCCAACAGGAGCTCATGGAGATGGTCAGGAACATGCCCGAATCATCTTACGAGCTTTCTCTCAAAGATCTCGTCGAACATCACTTGACTAATTCGAAACGCCAACAAGACGGTGACGCTACTTCCCTTTCAAGAGACGATTCCAGCTCTGAAACTTCCTTCCGAAGAGACCCTAGCAAGACCCGGAGTGAAACTAGGGCACTCGTTACCAGAAGTAGAAGCGTCGATAACGGTGGATTTTACCTCAAAATGTTCTTCCCACTGCCTTTTGGGCAGGTTTCGGCTAAAAAGAAGAGTAATCTCAGAACCGATTCGGGGTTGAGTGGTAGTTCGAGAGTGTCTCCTAAGCCACCGCCAGTGGACAGAGACTGGTGGAGGAAGAGATCGTCGGTAGCCGGCGGTGAGAACGAGGGTAGTATCTCCGGCGGAAGCATGACGAGTAGCGGCAGTAGTAATAGCACTAGCAGCGAAAGAAGCAATAGCAGGAATTCTGAATCGCAAGGAAGTTGCTGGTTTTGTATCAGTCCAATGAGAAGTAAAGATCATCGAGAGTAA

Protein sequence

MDDIRTKFPRKPTHIPDPIPRTATSYYKSPEHDSTSEDCIIFRGWDSAAAVDDDSQSESGVCSPTLWASNSRTSPQFHRPRNRSLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKDLVEHHLTNSKRQQDGDATSLSRDDSSSETSFRRDPSKTRSETRALVTRSRSVDNGGFYLKMFFPLPFGQVSAKKKSNLRTDSGLSGSSRVSPKPPPVDRDWWRKRSSVAGGENEGSISGGSMTSSGSSNSTSSERSNSRNSESQGSCWFCISPMRSKDHRE
Homology
[Close]
BLAST of Lsi08G005060 vs. TrEMBL
Match: A0A0A0KCW4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G349820 PE=4 SV=1)

HSP 1 Score: 453.8 bits (1166), Expect = 1.6e-124
Identity = 244/278 (87.77%), Postives = 253/278 (91.01%), Query Frame = 1 

Query: 1   MDDIRTKFPRKPTHIPDPIPRTATSYYKSPEHDSTSEDCIIFRGWDSAAAVDDDSQSESG 60
           M DI TK P KP            SYYKSPEH+S  EDCIIFRGWDSAAA+DDDSQSESG
Sbjct: 1   MGDINTKLPPKPD-----------SYYKSPEHNS--EDCIIFRGWDSAAAIDDDSQSESG 60

Query: 61  VCSPTLWASNSRTSPQFH-RPRNRSLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKD 120
           V SPTLWASNSRT+PQFH R RNRSLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKD
Sbjct: 61  VSSPTLWASNSRTTPQFHHRHRNRSLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKD 120

Query: 121 LVEHHLTNSKRQQDGDATSLSRDDSSSETSFRRDPSKTRSETRALVTRSRSVDNGGFYLK 180
           LVEHHLTNSKRQQDGD  SL+RDDSSSETSFRRDPSK R ETRALVTRSRSVD+GGFYLK
Sbjct: 121 LVEHHLTNSKRQQDGDVASLTRDDSSSETSFRRDPSKNRGETRALVTRSRSVDSGGFYLK 180

Query: 181 MFFPLPFGQVSAKKKSNLRTDSGLSGSSRVSPKPPPVDRDWWRKRSSVAGGENEGSISGG 240
           MFFPLPFGQVSAKKK+NLRTDSGLSGSSRVSPKPPPVD+DWWRKRSSV+GGEN+GSISGG
Sbjct: 181 MFFPLPFGQVSAKKKNNLRTDSGLSGSSRVSPKPPPVDKDWWRKRSSVSGGENDGSISGG 240

Query: 241 SMTSSGSSNSTSSERSNSRNSESQGSCWFCISPMRSKD 278
           SMTSSGSSNSTSSERSNSRNSESQGSCWFCISPMRSKD
Sbjct: 241 SMTSSGSSNSTSSERSNSRNSESQGSCWFCISPMRSKD 265

[Close]
BLAST of Lsi08G005060 vs. TrEMBL
Match: A0A0B2P8W9_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_046099 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.5e-34
Identity = 112/268 (41.79%), Postives = 152/268 (56.72%), Query Frame = 1 

Query: 13  THIPDPIPRTATSYYKSPEHDSTSEDCIIFRGWD----SAAAVDDDSQSESGVCSPTLWA 72
           TH  D    T T +  S +     ++C  +   +    + + VDD+   ESG+CSP LW 
Sbjct: 23  THGYDTWGATNTDFMASKKPPKNYKNCHSYNDMEVQLGTGSKVDDN---ESGICSPPLWT 82

Query: 73  SNSRTSPQFHRPRNRSLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKDLVEHHLTNS 132
           +N   SP   +   R LSP S+TQAIARGQ+ELMEMV+NMPESSYELSLKDLVEH     
Sbjct: 83  TNPPKSPHHRKNYYRCLSPASKTQAIARGQRELMEMVKNMPESSYELSLKDLVEHPRVEV 142

Query: 133 KRQQDGDATSLSRDDSSSETSFRRDPSKTRSETRALVTRSRSVDNGGFYLKMFFPLPFGQ 192
            +++  +     R    ++    R   K     +  V RS ++D+GGFYLKM FP+  G 
Sbjct: 143 AQEKGAE----ERKKLGNKNVGNR--KKVDMNKKGQVKRSGNIDSGGFYLKMVFPISLGF 202

Query: 193 VSAKKKSNLRTDSGLSGSSRVSPK------PPPVDRDWWRKRSSVAGGENE---GSISGG 252
               K  +L      SGS++VSP+         +D++WW+K  S +GGE++    SI+ G
Sbjct: 203 KKKTKNESLVN----SGSNKVSPRTSVSDGSKSLDKEWWKKSLSASGGESDSGVSSINSG 262

Query: 253 SMTSSGSSNSTSSERSNSRNSESQGSCW 268
           S  SSGSSNS+SS RSNSR+  S  SCW
Sbjct: 263 SKKSSGSSNSSSSSRSNSRHVVSASSCW 277

[Close]
BLAST of Lsi08G005060 vs. TrEMBL
Match: I1MAA6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_14G158800 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.5e-34
Identity = 112/268 (41.79%), Postives = 152/268 (56.72%), Query Frame = 1 

Query: 13  THIPDPIPRTATSYYKSPEHDSTSEDCIIFRGWD----SAAAVDDDSQSESGVCSPTLWA 72
           TH  D    T T +  S +     ++C  +   +    + + VDD+   ESG+CSP LW 
Sbjct: 23  THGYDTWGATNTDFMASKKPPKNYKNCHSYNDMEVQLGTGSKVDDN---ESGICSPPLWT 82

Query: 73  SNSRTSPQFHRPRNRSLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKDLVEHHLTNS 132
           +N   SP   +   R LSP S+TQAIARGQ+ELMEMV+NMPESSYELSLKDLVEH     
Sbjct: 83  TNPPKSPHHRKNYYRCLSPASKTQAIARGQRELMEMVKNMPESSYELSLKDLVEHPRVEV 142

Query: 133 KRQQDGDATSLSRDDSSSETSFRRDPSKTRSETRALVTRSRSVDNGGFYLKMFFPLPFGQ 192
            +++  +     R    ++    R   K     +  V RS ++D+GGFYLKM FP+  G 
Sbjct: 143 AQEKGAE----ERKKLGNKNVGNR--KKVDMNKKGQVKRSGNIDSGGFYLKMVFPISLGF 202

Query: 193 VSAKKKSNLRTDSGLSGSSRVSPK------PPPVDRDWWRKRSSVAGGENE---GSISGG 252
               K  +L      SGS++VSP+         +D++WW+K  S +GGE++    SI+ G
Sbjct: 203 KKKTKNESLVN----SGSNKVSPRTSVSDGSKSLDKEWWKKSLSASGGESDSGVSSINSG 262

Query: 253 SMTSSGSSNSTSSERSNSRNSESQGSCW 268
           S  SSGSSNS+SS RSNSR+  S  SCW
Sbjct: 263 SKKSSGSSNSSSSSRSNSRHVVSASSCW 277

[Close]
BLAST of Lsi08G005060 vs. TrEMBL
Match: A0A0S3RDN6_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.02G145000 PE=4 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 4.4e-34
Identity = 102/224 (45.54%), Postives = 135/224 (60.27%), Query Frame = 1 

Query: 45  WDSAAAVDDDSQSESGVCSPTLWASNSRTSPQFHRPRNRSLSPTSRTQAIARGQQELMEM 104
           W S   + + +Q +SG+CSP +W     TSP   +  +RSLSPTSRTQAI RGQ+ELMEM
Sbjct: 35  WPSKPPLQELNQDDSGICSPPMWT----TSPPHSKTDHRSLSPTSRTQAIVRGQRELMEM 94

Query: 105 VRNMPESSYELSLKDLVEHHLTNSKRQQDGDATSLSRDDSSSETSFRRDPSKTRSETRAL 164
           V+NMPES+YELSLKDLVEHH   +  +   + T  +RD S+     R    K        
Sbjct: 95  VKNMPESTYELSLKDLVEHHRLETAVEDRRNLTVYNRDKSTG----RVGVGKRVDNKMTQ 154

Query: 165 VTRSRSVDNGGFYLKMFFPLPFGQVSAKKKSNLRTDSGLSGSSRVSPKPP-----PVDRD 224
           V R+R++D GGFYLKM  P   G     K +  +++S  + SSRV+PKP       VD++
Sbjct: 155 VKRNRNIDRGGFYLKMGLPFSLGSKDKSKSNKKKSESSGNSSSRVTPKPDGSTKGGVDKE 214

Query: 225 WWRKRSSVAGGENEG--SISGGSMTSSGSSNS---TSSERSNSR 259
           WW+K  S   G + G  SI+ GS  SSGSS+S   +S+ RSNSR
Sbjct: 215 WWKKSPSAYKGSDSGESSINSGSSKSSGSSSSNSNSSNSRSNSR 250

[Close]
BLAST of Lsi08G005060 vs. TrEMBL
Match: A0A0L9UF29_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan04g168800 PE=4 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 4.4e-34
Identity = 102/224 (45.54%), Postives = 135/224 (60.27%), Query Frame = 1 

Query: 45  WDSAAAVDDDSQSESGVCSPTLWASNSRTSPQFHRPRNRSLSPTSRTQAIARGQQELMEM 104
           W S   + + +Q +SG+CSP +W     TSP   +  +RSLSPTSRTQAI RGQ+ELMEM
Sbjct: 35  WPSKPPLQELNQDDSGICSPPMWT----TSPPHSKTDHRSLSPTSRTQAIVRGQRELMEM 94

Query: 105 VRNMPESSYELSLKDLVEHHLTNSKRQQDGDATSLSRDDSSSETSFRRDPSKTRSETRAL 164
           V+NMPES+YELSLKDLVEHH   +  +   + T  +RD S+     R    K        
Sbjct: 95  VKNMPESTYELSLKDLVEHHRLETAVEDRRNLTVYNRDKSTG----RVGVGKRVDNKMTQ 154

Query: 165 VTRSRSVDNGGFYLKMFFPLPFGQVSAKKKSNLRTDSGLSGSSRVSPKPP-----PVDRD 224
           V R+R++D GGFYLKM  P   G     K +  +++S  + SSRV+PKP       VD++
Sbjct: 155 VKRNRNIDRGGFYLKMGLPFSLGSKDKSKSNKKKSESSGNSSSRVTPKPDGSTKGGVDKE 214

Query: 225 WWRKRSSVAGGENEG--SISGGSMTSSGSSNS---TSSERSNSR 259
           WW+K  S   G + G  SI+ GS  SSGSS+S   +S+ RSNSR
Sbjct: 215 WWKKSPSAYKGSDSGESSINSGSSKSSGSSSSNSNSSNSRSNSR 250

[Close]
BLAST of Lsi08G005060 vs. TAIR10
Match: AT1G21390.1 (AT1G21390.1 embryo defective 2170)

HSP 1 Score: 108.2 bits (269), Expect = 8.2e-24
Identity = 88/225 (39.11%), Postives = 118/225 (52.44%), Query Frame = 1 

Query: 50  AVDDDSQSESGVCSPTLW-ASNSRTSPQFHRPRNR-SLSPTSRTQAIARGQQELMEMVRN 109
           ++ +D  S+SGVCSPTLW  S  ++ P FHRP +  SLSP S+ QAIARGQ+ELMEMV  
Sbjct: 18  SIPNDDHSDSGVCSPTLWRTSPPKSPPPFHRPEDYWSLSPDSKAQAIARGQRELMEMVSK 77

Query: 110 MPESSYELSLKDLVEHHLTNSKRQQDGDATSLSRDDSSSETSFRRDPSKTRSETRALVTR 169
           MPES YELSLKDLVE  +     ++  D      +  S          KT+S+ R    R
Sbjct: 78  MPESCYELSLKDLVEVKVNQENERKVFDELPKRANRQSKVV------RKTKSDKRVDPNR 137

Query: 170 SRSVDNGGFYLKMFFPLPFGQV--SAKKKSNLRTDSGLSGSSRVSPKPPPV---DRDWWR 229
           S   +N GF LK+ F +  G +  + KKK   + D     S R S     V   D++WW 
Sbjct: 138 SGGGNNSGFLLKIMFLVSLGAMKDTTKKKKKKKKDEACKVSPRPSISEETVKVEDKEWWN 197

Query: 230 KRSSVAGGENEGSISGGSMTSSGSSNSTSSERSNSRNSESQGSCW 268
           +            +S  S   SGSS+S +S RS S   + + SC+
Sbjct: 198 R------------MSESSTKRSGSSSSNNSIRSRSSLRDEKSSCF 224

[Close]
BLAST of Lsi08G005060 vs. TAIR10
Match: AT1G76980.1 (AT1G76980.1 BEST Arabidopsis thaliana protein match is: embryo defective 2170 (TAIR:AT1G21390.1))

HSP 1 Score: 100.1 bits (248), Expect = 2.2e-21
Identity = 89/228 (39.04%), Postives = 121/228 (53.07%), Query Frame = 1 

Query: 54  DSQSESGVCSPTLWASNSRTSPQFHRPRNRSLSPTSRTQAIARGQQELMEMVRNMPESSY 113
           D  S+SGVCSP LW ++   SP       ++LSP ++ Q IARGQ+ELM+MV  MPES Y
Sbjct: 22  DDHSDSGVCSPPLWRTSPPKSPAHLHNNYQNLSPVTKAQVIARGQRELMDMVSKMPESCY 81

Query: 114 ELSLKDLVEHHLTNSKRQQDGDATSLSRDDSSSETSFRRDPSKTRSETRALVTRSRSVDN 173
           ELSLKDLVE    N++ ++  D      +    E   R+   KT+S+      R+  V+N
Sbjct: 82  ELSLKDLVE---VNTEEEKVFD------EMPQREKKPRKVVRKTKSDKWVDPIRNGGVNN 141

Query: 174 GGFYLKMFFPLPFGQVSAKKKSNLRTDSGLSGSSRV-------SPKP-------PPVDRD 233
            GF LK+ FP+  G   AKKK+N + D+    SS         SP+P          D+D
Sbjct: 142 SGFLLKLVFPVSLG---AKKKTNKKKDNDDDDSSVTSKRSWISSPRPSISDLSMKREDKD 201

Query: 234 WW-------RKRSSVAGGENEGSISGGSMTSSGSSNSTSSERSNSRNS 261
           WW       R+  SV    N    SG S +S GSS+ ++S+R  SRNS
Sbjct: 202 WWKDGLSESRRSQSVVSRIN----SGSSKSSGGSSSRSNSDR--SRNS 231

[Close]
BLAST of Lsi08G005060 vs. NCBI nr
Match: gi|659081933|ref|XP_008441584.1| (PREDICTED: uncharacterized protein LOC103485667 [Cucumis melo])

HSP 1 Score: 464.5 bits (1194), Expect = 1.3e-127
Identity = 247/277 (89.17%), Postives = 255/277 (92.06%), Query Frame = 1 

Query: 1   MDDIRTKFPRKPTHIPDPIPRTATSYYKSPEHDSTSEDCIIFRGWDSAAAVDDDSQSESG 60
           M DI TKFP      P PIP    SYYKSPEH+S  EDCIIFRGWDSAAA+DDDSQSESG
Sbjct: 1   MGDINTKFP------PKPIPPNPDSYYKSPEHNS--EDCIIFRGWDSAAAIDDDSQSESG 60

Query: 61  VCSPTLWASNSRTSPQFHRPRNRSLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKDL 120
           V SPTLWASNSRT+PQFHR RNRSLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKDL
Sbjct: 61  VSSPTLWASNSRTTPQFHRHRNRSLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKDL 120

Query: 121 VEHHLTNSKRQQDGDATSLSRDDSSSETSFRRDPSKTRSETRALVTRSRSVDNGGFYLKM 180
           VEHHLTNSKRQQDG   SLSRDDSSSETSFRRDPSK R ETRALVTRSRSVD+GGFYLKM
Sbjct: 121 VEHHLTNSKRQQDGAVASLSRDDSSSETSFRRDPSKNRGETRALVTRSRSVDSGGFYLKM 180

Query: 181 FFPLPFGQVSAKKKSNLRTDSGLSGSSRVSPKPPPVDRDWWRKRSSVAGGENEGSISGGS 240
           FFPLPFGQVSAKKK+NLRTDSGLSGSSRVSPKPPPVD+DWWRKRSSV+GGEN+GSISGGS
Sbjct: 181 FFPLPFGQVSAKKKNNLRTDSGLSGSSRVSPKPPPVDKDWWRKRSSVSGGENDGSISGGS 240

Query: 241 MTSSGSSNSTSSERSNSRNSESQGSCWFCISPMRSKD 278
           MTSSGSSNSTSSERSNSRNSESQGSCWFCISPMRSKD
Sbjct: 241 MTSSGSSNSTSSERSNSRNSESQGSCWFCISPMRSKD 269

[Close]
BLAST of Lsi08G005060 vs. NCBI nr
Match: gi|449453013|ref|XP_004144253.1| (PREDICTED: uncharacterized protein LOC101219576 [Cucumis sativus])

HSP 1 Score: 453.8 bits (1166), Expect = 2.3e-124
Identity = 244/278 (87.77%), Postives = 253/278 (91.01%), Query Frame = 1 

Query: 1   MDDIRTKFPRKPTHIPDPIPRTATSYYKSPEHDSTSEDCIIFRGWDSAAAVDDDSQSESG 60
           M DI TK P KP            SYYKSPEH+S  EDCIIFRGWDSAAA+DDDSQSESG
Sbjct: 1   MGDINTKLPPKPD-----------SYYKSPEHNS--EDCIIFRGWDSAAAIDDDSQSESG 60

Query: 61  VCSPTLWASNSRTSPQFH-RPRNRSLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKD 120
           V SPTLWASNSRT+PQFH R RNRSLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKD
Sbjct: 61  VSSPTLWASNSRTTPQFHHRHRNRSLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKD 120

Query: 121 LVEHHLTNSKRQQDGDATSLSRDDSSSETSFRRDPSKTRSETRALVTRSRSVDNGGFYLK 180
           LVEHHLTNSKRQQDGD  SL+RDDSSSETSFRRDPSK R ETRALVTRSRSVD+GGFYLK
Sbjct: 121 LVEHHLTNSKRQQDGDVASLTRDDSSSETSFRRDPSKNRGETRALVTRSRSVDSGGFYLK 180

Query: 181 MFFPLPFGQVSAKKKSNLRTDSGLSGSSRVSPKPPPVDRDWWRKRSSVAGGENEGSISGG 240
           MFFPLPFGQVSAKKK+NLRTDSGLSGSSRVSPKPPPVD+DWWRKRSSV+GGEN+GSISGG
Sbjct: 181 MFFPLPFGQVSAKKKNNLRTDSGLSGSSRVSPKPPPVDKDWWRKRSSVSGGENDGSISGG 240

Query: 241 SMTSSGSSNSTSSERSNSRNSESQGSCWFCISPMRSKD 278
           SMTSSGSSNSTSSERSNSRNSESQGSCWFCISPMRSKD
Sbjct: 241 SMTSSGSSNSTSSERSNSRNSESQGSCWFCISPMRSKD 265

[Close]
BLAST of Lsi08G005060 vs. NCBI nr
Match: gi|951059060|ref|XP_014522319.1| (PREDICTED: uncharacterized protein LOC106778838 [Vigna radiata var. radiata])

HSP 1 Score: 163.7 bits (413), Expect = 4.7e-37
Identity = 110/243 (45.27%), Postives = 144/243 (59.26%), Query Frame = 1 

Query: 45  WDSAAAVDDDSQSESGVCSPTLWASNSRTSPQFHRPRNRSLSPTSRTQAIARGQQELMEM 104
           W S   + + +Q +SG+CSP +W     TSP   +  +RSLSPTSRTQAI RGQ+ELMEM
Sbjct: 35  WPSKPPLQELNQDDSGICSPPMWT----TSPPHSKTDHRSLSPTSRTQAIVRGQRELMEM 94

Query: 105 VRNMPESSYELSLKDLVEHHLTNSKRQQDGDATSLSRDDSSSETSFRRDPSKTRSETRAL 164
           V+NMPES+YELSLKDLVEHH   +  +   + T   RD S      R D   T+      
Sbjct: 95  VKNMPESNYELSLKDLVEHHRLETAVEDRRNLTVYKRDKSG--VGKRVDNKMTQ------ 154

Query: 165 VTRSRSVDNGGFYLKMFFPLPFGQVSAKKKSNLRTDSGLSGSSRVSPKPP-----PVDRD 224
           V R+R++D GGFYLKM  P   G     K +  +++S  + SSRV+PKP       VD++
Sbjct: 155 VKRNRNIDRGGFYLKMGLPFSLGSKDKNKSNKKKSESSGNSSSRVTPKPDGSTKGGVDKE 214

Query: 225 WWRKRSSVAGGENEG--SISGGSMTSSGSSNSTSS-ERSNSRNSESQGSCWFCISPMRSK 280
           WW+K  S   G + G  SI+ GS  SSGSS+S SS  RSNSR  +    CWF IS  +S+
Sbjct: 215 WWKKSPSAYKGSDSGESSINSGSSKSSGSSSSNSSNSRSNSRREKGGRLCWFFISRRKSQ 265

[Close]
BLAST of Lsi08G005060 vs. NCBI nr
Match: gi|571510253|ref|XP_006596250.1| (PREDICTED: uncharacterized protein LOC100792746 [Glycine max])

HSP 1 Score: 154.8 bits (390), Expect = 2.2e-34
Identity = 112/268 (41.79%), Postives = 152/268 (56.72%), Query Frame = 1 

Query: 13  THIPDPIPRTATSYYKSPEHDSTSEDCIIFRGWD----SAAAVDDDSQSESGVCSPTLWA 72
           TH  D    T T +  S +     ++C  +   +    + + VDD+   ESG+CSP LW 
Sbjct: 23  THGYDTWGATNTDFMASKKPPKNYKNCHSYNDMEVQLGTGSKVDDN---ESGICSPPLWT 82

Query: 73  SNSRTSPQFHRPRNRSLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKDLVEHHLTNS 132
           +N   SP   +   R LSP S+TQAIARGQ+ELMEMV+NMPESSYELSLKDLVEH     
Sbjct: 83  TNPPKSPHHRKNYYRCLSPASKTQAIARGQRELMEMVKNMPESSYELSLKDLVEHPRVEV 142

Query: 133 KRQQDGDATSLSRDDSSSETSFRRDPSKTRSETRALVTRSRSVDNGGFYLKMFFPLPFGQ 192
            +++  +     R    ++    R   K     +  V RS ++D+GGFYLKM FP+  G 
Sbjct: 143 AQEKGAE----ERKKLGNKNVGNR--KKVDMNKKGQVKRSGNIDSGGFYLKMVFPISLGF 202

Query: 193 VSAKKKSNLRTDSGLSGSSRVSPK------PPPVDRDWWRKRSSVAGGENE---GSISGG 252
               K  +L      SGS++VSP+         +D++WW+K  S +GGE++    SI+ G
Sbjct: 203 KKKTKNESLVN----SGSNKVSPRTSVSDGSKSLDKEWWKKSLSASGGESDSGVSSINSG 262

Query: 253 SMTSSGSSNSTSSERSNSRNSESQGSCW 268
           S  SSGSSNS+SS RSNSR+  S  SCW
Sbjct: 263 SKKSSGSSNSSSSSRSNSRHVVSASSCW 277

[Close]
BLAST of Lsi08G005060 vs. NCBI nr
Match: gi|920698265|gb|KOM41490.1| (hypothetical protein LR48_Vigan04g168800 [Vigna angularis])

HSP 1 Score: 153.3 bits (386), Expect = 6.3e-34
Identity = 102/224 (45.54%), Postives = 135/224 (60.27%), Query Frame = 1 

Query: 45  WDSAAAVDDDSQSESGVCSPTLWASNSRTSPQFHRPRNRSLSPTSRTQAIARGQQELMEM 104
           W S   + + +Q +SG+CSP +W     TSP   +  +RSLSPTSRTQAI RGQ+ELMEM
Sbjct: 35  WPSKPPLQELNQDDSGICSPPMWT----TSPPHSKTDHRSLSPTSRTQAIVRGQRELMEM 94

Query: 105 VRNMPESSYELSLKDLVEHHLTNSKRQQDGDATSLSRDDSSSETSFRRDPSKTRSETRAL 164
           V+NMPES+YELSLKDLVEHH   +  +   + T  +RD S+     R    K        
Sbjct: 95  VKNMPESTYELSLKDLVEHHRLETAVEDRRNLTVYNRDKSTG----RVGVGKRVDNKMTQ 154

Query: 165 VTRSRSVDNGGFYLKMFFPLPFGQVSAKKKSNLRTDSGLSGSSRVSPKPP-----PVDRD 224
           V R+R++D GGFYLKM  P   G     K +  +++S  + SSRV+PKP       VD++
Sbjct: 155 VKRNRNIDRGGFYLKMGLPFSLGSKDKSKSNKKKSESSGNSSSRVTPKPDGSTKGGVDKE 214

Query: 225 WWRKRSSVAGGENEG--SISGGSMTSSGSSNS---TSSERSNSR 259
           WW+K  S   G + G  SI+ GS  SSGSS+S   +S+ RSNSR
Sbjct: 215 WWKKSPSAYKGSDSGESSINSGSSKSSGSSSSNSNSSNSRSNSR 250

The following BLAST results are available for this feature:
BLAST of Lsi08G005060 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Lsi08G005060 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KCW4_CUCSA1.6e-12487.77Uncharacterized protein OS=Cucumis sativus GN=Csa_6G349820 PE=4 SV=1[more]
A0A0B2P8W9_GLYSO1.5e-3441.79Uncharacterized protein OS=Glycine soja GN=glysoja_046099 PE=4 SV=1[more]
I1MAA6_SOYBN1.5e-3441.79Uncharacterized protein OS=Glycine max GN=GLYMA_14G158800 PE=4 SV=1[more]
A0A0S3RDN6_PHAAN4.4e-3445.54Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.02G145000 PE=... [more]
A0A0L9UF29_PHAAN4.4e-3445.54Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan04g168800 PE=4 SV=1[more]
BLAST of Lsi08G005060 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G21390.18.2e-2439.11 embryo defective 2170[more]
AT1G76980.12.2e-2139.04 BEST Arabidopsis thaliana protein match is: embryo defective 2170 (T... [more]
BLAST of Lsi08G005060 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659081933|ref|XP_008441584.1|1.3e-12789.17PREDICTED: uncharacterized protein LOC103485667 [Cucumis melo][more]
gi|449453013|ref|XP_004144253.1|2.3e-12487.77PREDICTED: uncharacterized protein LOC101219576 [Cucumis sativus][more]
gi|951059060|ref|XP_014522319.1|4.7e-3745.27PREDICTED: uncharacterized protein LOC106778838 [Vigna radiata var. radiata][more]
gi|571510253|ref|XP_006596250.1|2.2e-3441.79PREDICTED: uncharacterized protein LOC100792746 [Glycine max][more]
gi|920698265|gb|KOM41490.1|6.3e-3445.54hypothetical protein LR48_Vigan04g168800 [Vigna angularis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi08G005060.1Lsi08G005060.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34193FAMILY NOT NAMEDcoord: 3..280
score: 1.7
NoneNo IPR availablePANTHERPTHR34193:SF1SUBFAMILY NOT NAMEDcoord: 3..280
score: 1.7