MELO3C010580.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C010580.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionPentatricopeptide repeat-containing protein
Locationchr03 : 9946938 .. 9949159 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAAACATACTTAAAATGAGGAATATAAGGAGTATAATGTCCATTCTAAATTTGGAATTTGGAATTTGGAATTTTAAAAAAATAAAGAAGAGAAAAAAAAGACCCACAAAGAGTCGCCCATGAAAATGACTCTGCTTTCTTCAATCCTTCTTCTTCTTCCACTGCCATAATCATACCGCAACCTCCATTTTCCTCACCTTCTATTTCTCTCTCTCTCCTCTTCTCCATTTCCAATTCATCATGATCGGCACCGCCCGCAAGCTTCTCTCGAGCCCTACTGAATCCCCTGATTTTAGGGCTTTGAATACCACCATGGAATTCTCTTCTCCTTCTCCAACCCGGTCCTCCAGACCCGCTCTCAATCACGATATCTTCAGGAGTTGGAATGGTAAGCAGATTCATCTCAGGGATGATCATCCCTTCGAATATGGGTTTCGTTTAACTAGTCCTCAACGGAGCCCTCAGTTTTACCGATCCAATTACCACACTCTGTCTCCGCCGTCCAAGGCTCTCGCTATCGCTACCGGGCAGAAGGAGCTCATGGAAATTGTGAATAATATGCCGGAGTCGTGTTACGAATTGTCGTTGAGAGATTTGGTGGAGCAGCCGATGGTTGTAGGGCAACGAGAAGACACTGGAGTGGATGAGAGGGATTCTAATCTTGGCGGCCATCGGGAGGTCTTTTCGAGGGAGAATCGGAAATCCAGGAAGGAAACTAGGGCTTTGGTTGGTAGGAGTAGTATGGAGAATGAAGGTTTGTATCTGAAAATGGGGTTTCCGAAATCGATTGGAACTACGACGAGGAAGAAGAAAAAGAAGAATGATTCTAGTTTGAATATGAGTGCTAAAGTTTCTCCTAAACCTCCTCAGTTGGTGGAAAAGGATTGGTGGAAGAGAAGACTCTCAGTTTCATCTGAGAGTGAAAGCGTTTCTTATGGTTCTAATGTTAACAATGGAAGCATCAAGAGCAGTAGCAGTAGTAGCAGCAATGGCAGCAACAAGAGTAGAACAAAATCCACTGGCAGGTAACAGTAACACCATAACTATCAATTAATTGCTTCTTTGATTCACTCTACTTTTTAACTTGAGATATGAATAGGAGCGTTTGATCTTCTGTGTTGATATGAAAAACAGAGAAAATCACCACCGAGTAGAACTATTTCTATTTTGGGTCATTTTCAGGGCTGTCTATAGTATCATAAGAATTTGCTGAGTTGAACATGAATGGTTTCTACTGAAATGAAGAACTTGCAAATTCAGTATCTCTACCATTTTGGGTAGTAGAACGTCTCAAGCTGTTTTATGCACTAGTAATTCTAAGAACTTGCTGAGTTAAATTGAAGAACATGAATGAATTTTCTCTGAAATGAAGAACAACCAAATTCACCATTAAATAGGGCATCGGTTTGGGTAGTATACTTTATCGAGCTGTTTTATGCACTTGTATCCTAAGAATTTTTGTAAGAATAGGAATAGGTTTTCATTGAAATGAAGGACACACAAATCTTTCCATTAAAAGAGAACCATCGCTTTTCTGCACCATTTTAACTAGTGAAAGATTCTCAAGCTCCCCATCCTCTAGGAACATAGGAGAATCTGATGAGTTGATGATGAATGATTTTCTCTCTGGAATGAAGGACACACAATTTCACAATTCAATAGAGTCATCTCTACTCTGCATTGATTGTTCTGTGTCTTGAATTTTCTTTAAGAAACGGCTATAAACAGGGTTGATTTTCGTTCTTATGAATCAATTTAATACAGGCGTGCGAAGGGAGGTTGCTGGTCATGGATTTATCCCAAATATCATGAACGAGATGAATGAACAAGAGACTGCTCTGCCATGCACTCGAACAAAGTAAAAAGCAGAAGCCATAGGTATATAAGGTTATGGAAATGAAGGCATTGATTTTACAGCGTTTGTAAATTCTCTTTCAGTTTCTCAACGAAAATGCTTTTTTTCTTTTTGTTTTTGTTTGTCTTTTTTTGGTTCTTTAATACATATGTATGCCCTATGTCCTCAGGGTTTCTCTTCTTTAAGCTAATTGATAGAATGAATCTCCTTTTTCAATTAATATGTTATTTGTATTTTTTTCTTTATCATTTTGATGTTATGATGCTTTGTCTACCAAAGTGGTTCGATCCAATCAAGTTATGCCTTTAGATTCAAATTTTACTTATTTTTGGTGCAACCAATGTGATGCTGAGAATTTTAAAGGCC

mRNA sequence

AAAAAACATACTTAAAATGAGGAATATAAGGAGTATAATGTCCATTCTAAATTTGGAATTTGGAATTTGGAATTTTAAAAAAATAAAGAAGAGAAAAAAAAGACCCACAAAGAGTCGCCCATGAAAATGACTCTGCTTTCTTCAATCCTTCTTCTTCTTCCACTGCCATAATCATACCGCAACCTCCATTTTCCTCACCTTCTATTTCTCTCTCTCTCCTCTTCTCCATTTCCAATTCATCATGATCGGCACCGCCCGCAAGCTTCTCTCGAGCCCTACTGAATCCCCTGATTTTAGGGCTTTGAATACCACCATGGAATTCTCTTCTCCTTCTCCAACCCGGTCCTCCAGACCCGCTCTCAATCACGATATCTTCAGGAGTTGGAATGGTAAGCAGATTCATCTCAGGGATGATCATCCCTTCGAATATGGGTTTCGTTTAACTAGTCCTCAACGGAGCCCTCAGTTTTACCGATCCAATTACCACACTCTGTCTCCGCCGTCCAAGGCTCTCGCTATCGCTACCGGGCAGAAGGAGCTCATGGAAATTGTGAATAATATGCCGGAGTCGTGTTACGAATTGTCGTTGAGAGATTTGGTGGAGCAGCCGATGGTTGTAGGGCAACGAGAAGACACTGGAGTGGATGAGAGGGATTCTAATCTTGGCGGCCATCGGGAGGTCTTTTCGAGGGAGAATCGGAAATCCAGGAAGGAAACTAGGGCTTTGGTTGGTAGGAGTAGTATGGAGAATGAAGGTTTGTATCTGAAAATGGGGTTTCCGAAATCGATTGGAACTACGACGAGGAAGAAGAAAAAGAAGAATGATTCTAGTTTGAATATGAGTGCTAAAGTTTCTCCTAAACCTCCTCAGTTGGTGGAAAAGGATTGGTGGAAGAGAAGACTCTCAGTTTCATCTGAGAGTGAAAGCGTTTCTTATGGTTCTAATGTTAACAATGGAAGCATCAAGAGCAGTAGCAGTAGTAGCAGCAATGGCAGCAACAAGAGTAGAACAAAATCCACTGGCAGGCGTGCGAAGGGAGGTTGCTGGTCATGGATTTATCCCAAATATCATGAACGAGATGAATGAACAAGAGACTGCTCTGCCATGCACTCGAACAAAGTAAAAAGCAGAAGCCATAGGTATATAAGGTTATGGAAATGAAGGCATTGATTTTACAGCGTTTGTAAATTCTCTTTCAGTTTCTCAACGAAAATGCTTTTTTTCTTTTTGTTTTTGTTTGTCTTTTTTTGGTTCTTTAATACATATGTATGCCCTATGTCCTCAGGGTTTCTCTTCTTTAAGCTAATTGATAGAATGAATCTCCTTTTTCAATTAATATGTTATTTGTATTTTTTTCTTTATCATTTTGATGTTATGATGCTTTGTCTACCAAAGTGGTTCGATCCAATCAAGTTATGCCTTTAGATTCAAATTTTACTTATTTTTGGTGCAACCAATGTGATGCTGAGAATTTTAAAGGCC

Coding sequence (CDS)

ATGATCGGCACCGCCCGCAAGCTTCTCTCGAGCCCTACTGAATCCCCTGATTTTAGGGCTTTGAATACCACCATGGAATTCTCTTCTCCTTCTCCAACCCGGTCCTCCAGACCCGCTCTCAATCACGATATCTTCAGGAGTTGGAATGGTAAGCAGATTCATCTCAGGGATGATCATCCCTTCGAATATGGGTTTCGTTTAACTAGTCCTCAACGGAGCCCTCAGTTTTACCGATCCAATTACCACACTCTGTCTCCGCCGTCCAAGGCTCTCGCTATCGCTACCGGGCAGAAGGAGCTCATGGAAATTGTGAATAATATGCCGGAGTCGTGTTACGAATTGTCGTTGAGAGATTTGGTGGAGCAGCCGATGGTTGTAGGGCAACGAGAAGACACTGGAGTGGATGAGAGGGATTCTAATCTTGGCGGCCATCGGGAGGTCTTTTCGAGGGAGAATCGGAAATCCAGGAAGGAAACTAGGGCTTTGGTTGGTAGGAGTAGTATGGAGAATGAAGGTTTGTATCTGAAAATGGGGTTTCCGAAATCGATTGGAACTACGACGAGGAAGAAGAAAAAGAAGAATGATTCTAGTTTGAATATGAGTGCTAAAGTTTCTCCTAAACCTCCTCAGTTGGTGGAAAAGGATTGGTGGAAGAGAAGACTCTCAGTTTCATCTGAGAGTGAAAGCGTTTCTTATGGTTCTAATGTTAACAATGGAAGCATCAAGAGCAGTAGCAGTAGTAGCAGCAATGGCAGCAACAAGAGTAGAACAAAATCCACTGGCAGGCGTGCGAAGGGAGGTTGCTGGTCATGGATTTATCCCAAATATCATGAACGAGATGAATGA

Protein sequence

MIGTARKLLSSPTESPDFRALNTTMEFSSPSPTRSSRPALNHDIFRSWNGKQIHLRDDHPFEYGFRLTSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLRDLVEQPMVVGQREDTGVDERDSNLGGHREVFSRENRKSRKETRALVGRSSMENEGLYLKMGFPKSIGTTTRKKKKKNDSSLNMSAKVSPKPPQLVEKDWWKRRLSVSSESESVSYGSNVNNGSIKSSSSSSSNGSNKSRTKSTGRRAKGGCWSWIYPKYHERDE
Homology
[Close]
BLAST of MELO3C010580.2 vs. NCBI nr
Match: XP_008466690.1 (PREDICTED: uncharacterized protein LOC103504041 [Cucumis melo] >XP_016903625.1 PREDICTED: uncharacterized protein LOC103504041 [Cucumis melo])

HSP 1 Score: 464.9 bits (1195), Expect = 1.9e-127
Identity = 281/281 (100.00%), Postives = 281/281 (100.00%), Query Frame = 0 

Query: 1   MIGTARKLLSSPTESPDFRALNTTMEFSSPSPTRSSRPALNHDIFRSWNGKQIHLRDDHP 60
           MIGTARKLLSSPTESPDFRALNTTMEFSSPSPTRSSRPALNHDIFRSWNGKQIHLRDDHP
Sbjct: 1   MIGTARKLLSSPTESPDFRALNTTMEFSSPSPTRSSRPALNHDIFRSWNGKQIHLRDDHP 60

Query: 61  FEYGFRLTSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLRDLV 120
           FEYGFRLTSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLRDLV
Sbjct: 61  FEYGFRLTSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLRDLV 120

Query: 121 EQPMVVGQREDTGVDERDSNLGGHREVFSRENRKSRKETRALVGRSSMENEGLYLKMGFP 180
           EQPMVVGQREDTGVDERDSNLGGHREVFSRENRKSRKETRALVGRSSMENEGLYLKMGFP
Sbjct: 121 EQPMVVGQREDTGVDERDSNLGGHREVFSRENRKSRKETRALVGRSSMENEGLYLKMGFP 180

Query: 181 KSIGTXXXXXXXXXXXXLNMSAKVSPKPPQLVEKDWWKRRLSVSSESXXXXXXXXXXXXX 240
           KSIGTXXXXXXXXXXXXLNMSAKVSPKPPQLVEKDWWKRRLSVSSESXXXXXXXXXXXXX
Sbjct: 181 KSIGTXXXXXXXXXXXXLNMSAKVSPKPPQLVEKDWWKRRLSVSSESXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXGRRAKGGCWSWIYPKYHERDE 282
           XXXXXXXXXXXXXXXXXXXXGRRAKGGCWSWIYPKYHERDE
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXGRRAKGGCWSWIYPKYHERDE 281

[Close]
BLAST of MELO3C010580.2 vs. NCBI nr
Match: XP_004146783.1 (PREDICTED: uncharacterized protein LOC101215856 [Cucumis sativus])

HSP 1 Score: 433.0 bits (1112), Expect = 8.0e-118
Identity = 267/281 (95.02%), Postives = 271/281 (96.44%), Query Frame = 0 

Query: 1   MIGTARKLLSSPTESPDFRALNTTMEFSSPSPTRSSRPALNHDIFRSWNGKQIHLRDDHP 60
           MIG+ RKLLSSPTESPDFRALNTTMEFS  SPTRSSRPALNHDIFRSWNGKQIHLRDDHP
Sbjct: 1   MIGSTRKLLSSPTESPDFRALNTTMEFS--SPTRSSRPALNHDIFRSWNGKQIHLRDDHP 60

Query: 61  FEYGFRLTSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLRDLV 120
           FEYGFRLTSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLRDLV
Sbjct: 61  FEYGFRLTSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLRDLV 120

Query: 121 EQPMVVGQREDTGVDERDSNLGGHREVFSRENRKSRKETRALVGRSSMENEGLYLKMGFP 180
           EQPMV+GQREDTGVDE+DS LGG REVFSRENRKSRKETRALVGR+SMENEGLYLKMGFP
Sbjct: 121 EQPMVLGQREDTGVDEKDSYLGGDREVFSRENRKSRKETRALVGRTSMENEGLYLKMGFP 180

Query: 181 KSIGTXXXXXXXXXXXXLNMSAKVSPKPPQLVEKDWWKRRLSVSSESXXXXXXXXXXXXX 240
           KSIGTXXXXXXXXXXXXLNMSAKVSPKPPQLVEKDWWKRRLSV    XXXXXXXXXXXXX
Sbjct: 181 KSIGTXXXXXXXXXXXXLNMSAKVSPKPPQLVEKDWWKRRLSVXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXGRRAKGGCWSWIYPKYHERDE 282
           XXXXXXXXXXXXXXXXXXXXGRRA GGCWSWIYPKYHERDE
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXGRRANGGCWSWIYPKYHERDE 279

[Close]
BLAST of MELO3C010580.2 vs. NCBI nr
Match: KGN47737.1 (hypothetical protein Csa_6G397170 [Cucumis sativus])

HSP 1 Score: 401.7 bits (1031), Expect = 2.0e-108
Identity = 216/225 (96.00%), Postives = 220/225 (97.78%), Query Frame = 0 

Query: 1   MIGTARKLLSSPTESPDFRALNTTMEFSSPSPTRSSRPALNHDIFRSWNGKQIHLRDDHP 60
           MIG+ RKLLSSPTESPDFRALNTTMEFS  SPTRSSRPALNHDIFRSWNGKQIHLRDDHP
Sbjct: 1   MIGSTRKLLSSPTESPDFRALNTTMEFS--SPTRSSRPALNHDIFRSWNGKQIHLRDDHP 60

Query: 61  FEYGFRLTSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLRDLV 120
           FEYGFRLTSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLRDLV
Sbjct: 61  FEYGFRLTSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLRDLV 120

Query: 121 EQPMVVGQREDTGVDERDSNLGGHREVFSRENRKSRKETRALVGRSSMENEGLYLKMGFP 180
           EQPMV+GQREDTGVDE+DS LGG REVFSRENRKSRKETRALVGR+SMENEGLYLKMGFP
Sbjct: 121 EQPMVLGQREDTGVDEKDSYLGGDREVFSRENRKSRKETRALVGRTSMENEGLYLKMGFP 180

Query: 181 KSIGTXXXXXXXXXXXXLNMSAKVSPKPPQLVEKDWWKRRLSVSS 226
           KSIGTXXXXXXXXXXXXLNMSAKVSPKPPQLVEKDWWKRRLSVSS
Sbjct: 181 KSIGTXXXXXXXXXXXXLNMSAKVSPKPPQLVEKDWWKRRLSVSS 223

[Close]
BLAST of MELO3C010580.2 vs. NCBI nr
Match: XP_023536601.1 (uncharacterized protein LOC111797724 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 349.0 bits (894), Expect = 1.5e-92
Identity = 225/291 (77.32%), Postives = 241/291 (82.82%), Query Frame = 0 

Query: 1   MIGTARKLLSSPTESPDFRALNTTMEFSSPSPTR---SSRPALNHDIFRSWNGKQIHLRD 60
           M+G++RKLLSSPTESPDFRA +  M+F SP+ TR   SSRPALNHDIFRSWNGKQIHL+D
Sbjct: 1   MLGSSRKLLSSPTESPDFRAFD-AMDFGSPASTRSRSSSRPALNHDIFRSWNGKQIHLKD 60

Query: 61  DHPFEYGFRLTSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLR 120
           D   EYGFRL+SPQRSPQFYRSNY +LSPPSKALAIATGQKELME+VNNMPESCYELSLR
Sbjct: 61  DETVEYGFRLSSPQRSPQFYRSNYQSLSPPSKALAIATGQKELMELVNNMPESCYELSLR 120

Query: 121 DLVEQPMVVGQREDTGVDERDSNLGGHREVFSRENRKSRKETRALVGRSS--MENEGLYL 180
           DLVEQPMV+GQ+E TG +ERD   GG REVF+ ENRKSRKET ALVGRSS  MEN GLYL
Sbjct: 121 DLVEQPMVLGQQEPTGANERDK--GGDREVFAMENRKSRKETSALVGRSSWNMENGGLYL 180

Query: 181 KMGFPKSIG--TXXXXXXXXXXXXLNMSAKVSPKPPQLVEKDWWKRRLSVSSES---XXX 240
           KMGFP SIG  TXXXXXXXXXXXXLN SAKVSPKP   VEKDWWKRRLSVSSE+      
Sbjct: 181 KMGFPNSIGTRTXXXXXXXXXXXXLNTSAKVSPKPSHPVEKDWWKRRLSVSSETGSVAYD 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRRAKGGCWSWIYPKYHERDE 282
                    XXXXXXXXXXXXXXXXXXX  GR A GGCWS IYPKY+ERDE
Sbjct: 241 SSVNNGSIKXXXXXXXXXXXXXXXXXXXSSGRHANGGCWSCIYPKYNERDE 288

[Close]
BLAST of MELO3C010580.2 vs. NCBI nr
Match: XP_022975014.1 (uncharacterized protein LOC111473911 [Cucurbita maxima])

HSP 1 Score: 342.0 bits (876), Expect = 1.9e-90
Identity = 217/290 (74.83%), Postives = 235/290 (81.03%), Query Frame = 0 

Query: 1   MIGTARKLLSSPTESPDFRALNTTMEFSSPSPTR---SSRPALNHDIFRSWNGKQIHLRD 60
           M+G++RKLLSSPTESPDFRA +  M+F SP+ TR   SSRPALNHDIFRSWNGKQIHL+D
Sbjct: 1   MLGSSRKLLSSPTESPDFRAFD-AMDFGSPASTRSRSSSRPALNHDIFRSWNGKQIHLKD 60

Query: 61  DHPFEYGFRLTSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLR 120
           D   EYGFRL+SPQRSPQFYRSNY +LSPPSK+LAIATGQKELME+VNNMPESCYELSLR
Sbjct: 61  DETVEYGFRLSSPQRSPQFYRSNYQSLSPPSKSLAIATGQKELMELVNNMPESCYELSLR 120

Query: 121 DLVEQPMVVGQREDTGVDERDSNLGGHREVFSRENRKSRKETRALVGRSS--MENEGLYL 180
           DLVEQPMV+GQ+E TG +ERD   GG REVF+ ENRKS+KET  LVGRSS  MEN GLYL
Sbjct: 121 DLVEQPMVLGQQEPTGANERDK--GGDREVFATENRKSKKETSGLVGRSSWNMENGGLYL 180

Query: 181 KMGFPKSIGT-XXXXXXXXXXXXLNMSAKVSPKPPQLVEKDWWKRRLSVSSES---XXXX 240
           KMGFP SIGT  XXXXXXXXX  LN SAKVSPKP   VEKDWWKRRLSVSSE+       
Sbjct: 181 KMGFPNSIGTRTXXXXXXXXXSGLNTSAKVSPKPSHPVEKDWWKRRLSVSSETGSVAYDS 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRRAKGGCWSWIYPKYHERDE 282
                   XXXXXXXXXXXXXXXXXX   GR A GGCWS IYPK +ERDE
Sbjct: 241 IVNNGSIKXXXXXXXXXXXXXXXXXXKSSGRHANGGCWSCIYPKCNERDE 287

[Close]
BLAST of MELO3C010580.2 vs. TAIR10
Match: AT1G76980.1 (BEST Arabidopsis thaliana protein match is: embryo defective 2170 (TAIR:AT1G21390.1))

HSP 1 Score: 85.5 bits (210), Expect = 5.7e-17
Identity = 75/173 (43.35%), Postives = 95/173 (54.91%), Query Frame = 0 

Query: 68  TSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLRDLVEQPMVVG 127
           TSP +SP    +NY  LSP +KA  IA GQ+ELM++V+ MPESCYELSL+DLVE    V 
Sbjct: 37  TSPPKSPAHLHNNYQNLSPVTKAQVIARGQRELMDMVSKMPESCYELSLKDLVE----VN 96

Query: 128 QREDTGVDERDSNLGGHREVFSRENRKSRKETRA-LVGRSSMENEGLYLKMGFPKSIGT- 187
             E+   DE        R+V     RK++ +     +    + N G  LK+ FP S+G  
Sbjct: 97  TEEEKVFDEMPQREKKPRKVV----RKTKSDKWVDPIRNGGVNNSGFLLKLVFPVSLGAX 156

Query: 188 -----XXXXXXXXXXXXLNMSAKVSPKPP------QLVEKDWWKRRLSVSSES 228
                XXXXXXXXXXXX   S   SP+P       +  +KDWWK  LS S  S
Sbjct: 157 XXXXXXXXXXXXXXXXXXKRSWISSPRPSISDLSMKREDKDWWKDGLSESRRS 201

[Close]
BLAST of MELO3C010580.2 vs. TAIR10
Match: AT1G21390.1 (embryo defective 2170)

HSP 1 Score: 70.5 bits (171), Expect = 1.9e-12
Identity = 44/93 (47.31%), Postives = 60/93 (64.52%), Query Frame = 0 

Query: 65  FRLTSPQRSPQFYR-SNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLRDLVEQP 124
           +R + P+  P F+R  +Y +LSP SKA AIA GQ+ELME+V+ MPESCYELSL+DLVE  
Sbjct: 35  WRTSPPKSPPPFHRPEDYWSLSPDSKAQAIARGQRELMEMVSKMPESCYELSLKDLVE-- 94

Query: 125 MVVGQREDTGVDERDSNLGGHREVFSRENRKSR 157
           + V Q  +  V +         E+  R NR+S+
Sbjct: 95  VKVNQENERKVFD---------ELPKRANRQSK 116

[Close]
BLAST of MELO3C010580.2 vs. TrEMBL
Match: tr|A0A1S4E6L8|A0A1S4E6L8_CUCME (uncharacterized protein LOC103504041 OS=Cucumis melo OX=3656 GN=LOC103504041 PE=4 SV=1)

HSP 1 Score: 464.9 bits (1195), Expect = 1.3e-127
Identity = 281/281 (100.00%), Postives = 281/281 (100.00%), Query Frame = 0 

Query: 1   MIGTARKLLSSPTESPDFRALNTTMEFSSPSPTRSSRPALNHDIFRSWNGKQIHLRDDHP 60
           MIGTARKLLSSPTESPDFRALNTTMEFSSPSPTRSSRPALNHDIFRSWNGKQIHLRDDHP
Sbjct: 1   MIGTARKLLSSPTESPDFRALNTTMEFSSPSPTRSSRPALNHDIFRSWNGKQIHLRDDHP 60

Query: 61  FEYGFRLTSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLRDLV 120
           FEYGFRLTSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLRDLV
Sbjct: 61  FEYGFRLTSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLRDLV 120

Query: 121 EQPMVVGQREDTGVDERDSNLGGHREVFSRENRKSRKETRALVGRSSMENEGLYLKMGFP 180
           EQPMVVGQREDTGVDERDSNLGGHREVFSRENRKSRKETRALVGRSSMENEGLYLKMGFP
Sbjct: 121 EQPMVVGQREDTGVDERDSNLGGHREVFSRENRKSRKETRALVGRSSMENEGLYLKMGFP 180

Query: 181 KSIGTXXXXXXXXXXXXLNMSAKVSPKPPQLVEKDWWKRRLSVSSESXXXXXXXXXXXXX 240
           KSIGTXXXXXXXXXXXXLNMSAKVSPKPPQLVEKDWWKRRLSVSSESXXXXXXXXXXXXX
Sbjct: 181 KSIGTXXXXXXXXXXXXLNMSAKVSPKPPQLVEKDWWKRRLSVSSESXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXGRRAKGGCWSWIYPKYHERDE 282
           XXXXXXXXXXXXXXXXXXXXGRRAKGGCWSWIYPKYHERDE
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXGRRAKGGCWSWIYPKYHERDE 281

[Close]
BLAST of MELO3C010580.2 vs. TrEMBL
Match: tr|A0A0A0KH64|A0A0A0KH64_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G397170 PE=4 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 1.3e-108
Identity = 216/225 (96.00%), Postives = 220/225 (97.78%), Query Frame = 0 

Query: 1   MIGTARKLLSSPTESPDFRALNTTMEFSSPSPTRSSRPALNHDIFRSWNGKQIHLRDDHP 60
           MIG+ RKLLSSPTESPDFRALNTTMEFS  SPTRSSRPALNHDIFRSWNGKQIHLRDDHP
Sbjct: 1   MIGSTRKLLSSPTESPDFRALNTTMEFS--SPTRSSRPALNHDIFRSWNGKQIHLRDDHP 60

Query: 61  FEYGFRLTSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLRDLV 120
           FEYGFRLTSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLRDLV
Sbjct: 61  FEYGFRLTSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLRDLV 120

Query: 121 EQPMVVGQREDTGVDERDSNLGGHREVFSRENRKSRKETRALVGRSSMENEGLYLKMGFP 180
           EQPMV+GQREDTGVDE+DS LGG REVFSRENRKSRKETRALVGR+SMENEGLYLKMGFP
Sbjct: 121 EQPMVLGQREDTGVDEKDSYLGGDREVFSRENRKSRKETRALVGRTSMENEGLYLKMGFP 180

Query: 181 KSIGTXXXXXXXXXXXXLNMSAKVSPKPPQLVEKDWWKRRLSVSS 226
           KSIGTXXXXXXXXXXXXLNMSAKVSPKPPQLVEKDWWKRRLSVSS
Sbjct: 181 KSIGTXXXXXXXXXXXXLNMSAKVSPKPPQLVEKDWWKRRLSVSS 223

[Close]
BLAST of MELO3C010580.2 vs. TrEMBL
Match: tr|A0A2I4HPT7|A0A2I4HPT7_9ROSI (uncharacterized protein LOC108981371 OS=Juglans regia OX=51240 GN=LOC109020192 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 1.7e-31
Identity = 89/210 (42.38%), Postives = 119/210 (56.67%), Query Frame = 0 

Query: 33  TRSSRPALNHDIFRSWNGKQIHLR-------DDHPFEYGFRLTSPQRSPQFYRSNYHTLS 92
           +R+ + A N+  + SWNG ++ L        D          TSP  SPQ   ++Y +LS
Sbjct: 36  SRARKAAQNYKKYNSWNGMEVRLAPEKKAVDDSDICSPPLWTTSPPESPQHRANHYRSLS 95

Query: 93  PPSKALAIATGQKELMEIVNNMPESCYELSLRDLVEQPMVVGQREDTGVDERDSNLGGHR 152
           P S+  AIA GQ+ELME+V NMPESCYEL+L+DLVEQP+V   RE    +   S      
Sbjct: 96  PKSRTEAIARGQQELMEMVRNMPESCYELTLKDLVEQPLVEPPRESVSEERNPS----AE 155

Query: 153 EVFSRENRKSRKETRALVGRS--SMENEGLYLKMGFPKSIGTXXXXXXXXXXXXLNMSAK 212
            V+ +E+ K   + RAL  RS   M+  GLYLKMGFP  +G+             N +AK
Sbjct: 156 VVYRKESSKKMSDKRALARRSIGGMDGGGLYLKMGFPMFLGS--RKNNKKNESVTNTNAK 215

Query: 213 VSPKPP------QLVEKDWWKRRLSVSSES 228
           VSPKPP      ++V+K+WWK+R SVS ES
Sbjct: 216 VSPKPPVPDGSAKVVDKEWWKKRFSVSGES 239

[Close]
BLAST of MELO3C010580.2 vs. TrEMBL
Match: tr|A0A2P4JYR9|A0A2P4JYR9_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_23501 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 6.4e-31
Identity = 114/249 (45.78%), Postives = 149/249 (59.84%), Query Frame = 0 

Query: 1   MIGTARKLLSSPTESPDFRALNTTMEFSSPSP----TRSSRPALNHDIFRSWNGKQIHLR 60
           M+    KLL + T+S D      T  + S  P     R+ + A N+  + SWNG ++   
Sbjct: 1   MLDPGTKLLQNRTQSTDHIGKLCTDSYDSSGPRNYGPRARKTAQNYTKYNSWNGMEVKFE 60

Query: 61  DDHPF--EYG-----FRLTSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPE 120
            +     E G        TSP RSPQ   ++Y +LSP S+  AIA GQ+ELME+V NMPE
Sbjct: 61  PEMKAVDESGICSPPLWKTSPPRSPQHRANHYRSLSPTSRTQAIARGQRELMEMVKNMPE 120

Query: 121 SCYELSLRDLVEQPMVV--GQREDTGVDERDSNLGGHREVFSRENRKSRKETRA---LVG 180
           +CYELSL+D+VEQP V+    RE +  +ERD N      ++ REN K R + RA   +V 
Sbjct: 121 ACYELSLKDIVEQPKVLEARARESSVSEERDLNT---EVLYKRENSKKRNDKRAQSQVVK 180

Query: 181 RS-SMENEGLYLKMGFPKSIGT--XXXXXXXXXXXXLNMSAKVSPKP------PQLVEKD 225
           RS S+ N G YLKM FP S+G+  XXXXXXXXXXXX N SAKVSPKP       + V+K+
Sbjct: 181 RSASINNGGFYLKMVFPVSLGSXXXXXXXXXXXXXXXNTSAKVSPKPIVQDGSSKGVDKE 240

[Close]
BLAST of MELO3C010580.2 vs. TrEMBL
Match: tr|A0A2N9G2A1|A0A2N9G2A1_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS21331 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 8.7e-28
Identity = 101/236 (42.80%), Postives = 140/236 (59.32%), Query Frame = 0 

Query: 13  TESPDFRALNTTMEFSSPSPTRSSRPALNHDIFRSWNGKQIHLRDDHPF--EYG-----F 72
           T+S D   +  + E  +  P R+ + A N   + SWNG ++    +     E G      
Sbjct: 13  TQSSDVVLVKDSYEPWNYGP-RAKKAAQNFTKYNSWNGTEVRFDPEMKAVDESGVCSPPL 72

Query: 73  RLTSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLRDLVEQPMV 132
             TSP RSPQ   ++Y +LSP S+  AIA GQKELME+V NMPE+CYELSL+DLVE+P +
Sbjct: 73  WKTSPPRSPQHRANHYRSLSPTSRTQAIAKGQKELMEMVRNMPEACYELSLKDLVEKPKL 132

Query: 133 VG---QREDTGVDERDSNLGGHREVFSRE---NRKSRKETRALVGRSSMENEGLYLKMGF 192
                Q+E    ++RD NL     ++ RE   N+++ K  + +   +S+ + G YLKM F
Sbjct: 133 EARQQQQERNISEDRDLNLSSTEILYRRENSNNKRNDKRAQVVKRSASINSGGFYLKMVF 192

Query: 193 PKSI--GTXXXXXXXXXXXXLNMSAKVSPKP------PQLVEKDWWKRRLSVSSES 228
           P S+    XXXXXXXXXX   N SAKVSP+P      P+ V+K+WWK+R+SVS ES
Sbjct: 193 PVSLRSNXXXXXXXXXXXSVTNTSAKVSPRPSVSDGSPKGVDKEWWKKRISVSGES 247

The following BLAST results are available for this feature:
BLAST of MELO3C010580.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008466690.11.9e-127100.00PREDICTED: uncharacterized protein LOC103504041 [Cucumis melo] >XP_016903625.1 P... [more]
XP_004146783.18.0e-11895.02PREDICTED: uncharacterized protein LOC101215856 [Cucumis sativus][more]
KGN47737.12.0e-10896.00hypothetical protein Csa_6G397170 [Cucumis sativus][more]
XP_023536601.11.5e-9277.32uncharacterized protein LOC111797724 [Cucurbita pepo subsp. pepo][more]
XP_022975014.11.9e-9074.83uncharacterized protein LOC111473911 [Cucurbita maxima][more]
BLAST of MELO3C010580.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G76980.15.7e-1743.35BEST Arabidopsis thaliana protein match is: embryo defective 2170 (TAIR:AT1G2139... [more]
AT1G21390.11.9e-1247.31embryo defective 2170[more]
BLAST of MELO3C010580.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C010580.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S4E6L8|A0A1S4E6L8_CUCME1.3e-127100.00uncharacterized protein LOC103504041 OS=Cucumis melo OX=3656 GN=LOC103504041 PE=... [more]
tr|A0A0A0KH64|A0A0A0KH64_CUCSA1.3e-10896.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G397170 PE=4 SV=1[more]
tr|A0A2I4HPT7|A0A2I4HPT7_9ROSI1.7e-3142.38uncharacterized protein LOC108981371 OS=Juglans regia OX=51240 GN=LOC109020192 P... [more]
tr|A0A2P4JYR9|A0A2P4JYR9_QUESU6.4e-3145.78Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_23501 PE=4 SV=1[more]
tr|A0A2N9G2A1|A0A2N9G2A1_FAGSY8.7e-2842.80Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS21331 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0008568 microtubule-severing ATPase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C010580.2.1MELO3C010580.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 226..266
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 226..257
NoneNo IPR availablePANTHERPTHR34193FAMILY NOT NAMEDcoord: 67..273
NoneNo IPR availablePANTHERPTHR34193:SF1SUBFAMILY NOT NAMEDcoord: 67..273

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C010580.2Csa6G397170Cucumber (Chinese Long) v2cumedB460
MELO3C010580.2CSPI06G20540Wild cucumber (PI 183967)cpimedB469
MELO3C010580.2CmaCh09G010710Cucurbita maxima (Rimu)cmamedB027
MELO3C010580.2CmoCh09G010790Cucurbita moschata (Rifu)cmomedB015
MELO3C010580.2Lsi08G002810Bottle gourd (USVL1VR-Ls)lsimedB492
MELO3C010580.2Cp4.1LG06g07800Cucurbita pepo (Zucchini)cpemedB855
MELO3C010580.2Cla97C08G146940Watermelon (97103) v2medwmbB292
MELO3C010580.2Bhi04G001704Wax gourdmedwgoB348
MELO3C010580.2CsaV3_6G035580Cucumber (Chinese Long) v3cucmedB478
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C010580.2Silver-seed gourdcarmedB0614
MELO3C010580.2Silver-seed gourdcarmedB0634
MELO3C010580.2Cucurbita maxima (Rimu)cmamedB476
MELO3C010580.2Cucurbita moschata (Rifu)cmomedB463
MELO3C010580.2Cucurbita pepo (Zucchini)cpemedB611