Cp4.1LG04g13600 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG04g13600
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	DUF4228 domain protein
Location	Cp4.1LG04 : 11102087 .. 11102599 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAACTCAGCGTTCTGTGCGCCTTCGATGGCCTCCAATGGCGCCGCGAAGGTCTTAACCTTGGACGGAAACTTGCAGAGCTTCACGAAGCCAGTGAAGGCCGCTGAATTAATGATCGAGCATTCCGGAAAATTCCTCTGCGATTCCGGCGATCTCAAGGTCGGCCACCGGATTCCAGGCCTTTTGACGGAGGAGTATCTTGAGGGCGGCCGATTGTACTTTCTACTTCCGATGGATCTTCTTTATTCTGTGTTGACGATCGAGGAAATGAGTTCTCTCACCTACATCGCTACGAAGGCTCTGAAACGTGGAAATTCAAGTGGATTTGGAAGGATCTTCCCTGTTTTGATCAGTGAACTCTGTATTTTTCCGTCGGATGTCAATGGATTGAAATCGGCGGATGGCGATGGAGAGAATAATCAAAGTTCAAAGCCGGTGCAGAGATTGATGTCGAAACAGAGATCGTGGAAGCCGGCGCTCGAAACCATTGCTGAAACTTCGTGCACATAG

mRNA sequence

ATGGGGAACTCAGCGTTCTGTGCGCCTTCGATGGCCTCCAATGGCGCCGCGAAGGTCTTAACCTTGGACGGAAACTTGCAGAGCTTCACGAAGCCAGTGAAGGCCGCTGAATTAATGATCGAGCATTCCGGAAAATTCCTCTGCGATTCCGGCGATCTCAAGGTCGGCCACCGGATTCCAGGCCTTTTGACGGAGGAGTATCTTGAGGGCGGCCGATTGTACTTTCTACTTCCGATGGATCTTCTTTATTCTGTGTTGACGATCGAGGAAATGAGTTCTCTCACCTACATCGCTACGAAGGCTCTGAAACGTGGAAATTCAAGTGGATTTGGAAGGATCTTCCCTGTTTTGATCAGTGAACTCTGTATTTTTCCGTCGGATGTCAATGGATTGAAATCGGCGGATGGCGATGGAGAGAATAATCAAAGTTCAAAGCCGGTGCAGAGATTGATGTCGAAACAGAGATCGTGGAAGCCGGCGCTCGAAACCATTGCTGAAACTTCGTGCACATAG

Coding sequence (CDS)

ATGGGGAACTCAGCGTTCTGTGCGCCTTCGATGGCCTCCAATGGCGCCGCGAAGGTCTTAACCTTGGACGGAAACTTGCAGAGCTTCACGAAGCCAGTGAAGGCCGCTGAATTAATGATCGAGCATTCCGGAAAATTCCTCTGCGATTCCGGCGATCTCAAGGTCGGCCACCGGATTCCAGGCCTTTTGACGGAGGAGTATCTTGAGGGCGGCCGATTGTACTTTCTACTTCCGATGGATCTTCTTTATTCTGTGTTGACGATCGAGGAAATGAGTTCTCTCACCTACATCGCTACGAAGGCTCTGAAACGTGGAAATTCAAGTGGATTTGGAAGGATCTTCCCTGTTTTGATCAGTGAACTCTGTATTTTTCCGTCGGATGTCAATGGATTGAAATCGGCGGATGGCGATGGAGAGAATAATCAAAGTTCAAAGCCGGTGCAGAGATTGATGTCGAAACAGAGATCGTGGAAGCCGGCGCTCGAAACCATTGCTGAAACTTCGTGCACATAG

Protein sequence

MGNSAFCAPSMASNGAAKVLTLDGNLQSFTKPVKAAELMIEHSGKFLCDSGDLKVGHRIPGLLTEEYLEGGRLYFLLPMDLLYSVLTIEEMSSLTYIATKALKRGNSSGFGRIFPVLISELCIFPSDVNGLKSADGDGENNQSSKPVQRLMSKQRSWKPALETIAETSCT

Homology

[Close]

BLAST of Cp4.1LG04g13600 vs. TrEMBL
Match: A0A0A0LSX3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G025190 PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 1.0e-70
Identity = 141/170 (82.94%), Postives = 149/170 (87.65%), Query Frame = 1


Query: 1   MGNSAFCAPSMASNGAAKVLTLDGNLQSFTKPVKAAELMIEHSGKFLCDSGDLKVGHRIP 60
           MGNSA CAPSMASNGA KVL+LDG LQSF+KPV AAELMIEHSGKFLCDS DLKVGHRI 
Sbjct: 1   MGNSASCAPSMASNGAPKVLSLDGRLQSFSKPVTAAELMIEHSGKFLCDSSDLKVGHRIQ 60

Query: 61  GLLTEEYLEGGRLYFLLPMDLLYSVLTIEEMSSLTYIATKALKRGNSSGFGRIFPVLISE 120
           GLL +E LE  RLYFLLPMDLLYSVLT+EEMSSLT+IATKALK+GNSSGFGRIFPVLISE
Sbjct: 61  GLLPDEDLEWRRLYFLLPMDLLYSVLTLEEMSSLTFIATKALKQGNSSGFGRIFPVLISE 120

Query: 121 LCIFPSDVNGLKSADGDGENNQSSKPVQRLMSKQRSWKPALETIAETSCT 171
            C  P+DV GLK  D D   NQSSK V+RLMSKQRSWKPALETIAETSCT
Sbjct: 121 FCNSPADVKGLKLEDDDDRENQSSKAVKRLMSKQRSWKPALETIAETSCT 170

[Close]

BLAST of Cp4.1LG04g13600 vs. TrEMBL
Match: A9PEN7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0015s04770g PE=2 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 9.8e-45
Identity = 104/167 (62.28%), Postives = 124/167 (74.25%), Query Frame = 1


Query: 1   MGNSAFCAPSMASNGAAKVLTLDGNLQSFTKPVKAAELMIEHSGKFLCDSGDLKVGHRIP 60
           MGN+  CAPS+ SNG  KVLT  GNLQ +TKPVKAAELM+E+ G+F+CDS  LKVGHR+ 
Sbjct: 1   MGNATSCAPSIISNGVVKVLTNGGNLQIYTKPVKAAELMLENPGQFVCDSTSLKVGHRVH 60

Query: 61  GLLTEEYLEGGRLYFLLPMDLLYSVLTIEEMSSLTYIATKALKRGNSSGFGRIFPVLISE 120
           GLL ++ LE  + YF+LPM+LLYSVLT EEMSSLTY ATKALK  N   FG+IFPVL SE
Sbjct: 61  GLLADDQLERRQFYFVLPMELLYSVLTHEEMSSLTYKATKALKYNN---FGKIFPVL-SE 120

Query: 121 LCIFPSDVNGLKSADGDGENNQSSKPVQRLMSKQRSWKPALETIAET 168
            CIFPS+   + S   +       +P++R  SKQRSWKPALETI ET
Sbjct: 121 FCIFPSEGKTMDSMATE------PQPMER-YSKQRSWKPALETIVET 156

[Close]

BLAST of Cp4.1LG04g13600 vs. TrEMBL
Match: A0A0L9ULE0_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan05g097800 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 3.7e-44
Identity = 97/167 (58.08%), Postives = 128/167 (76.65%), Query Frame = 1


Query: 1   MGNSAFCAPSMASNGAAKVLTLDGNLQSFTKPVKAAELMIEHSGKFLCDSGDLKVGHRIP 60
           MGN+A C PS+ +NG  KVL LDG L+S+TKP++AAELM+E+ G+F+CDS  LKVGHRI 
Sbjct: 1   MGNAASCTPSLTANGVFKVLFLDGRLESYTKPIRAAELMLEYPGQFVCDSTYLKVGHRIQ 60

Query: 61  GLLTEEYLEGGRLYFLLPMDLLYSVLTIEEMSSLTYIATKALKRGNSSGFGRIFPVLISE 120
           GLL +E LE  + YFLLPM+LLYSVLT EEMSSL Y A++A K  + +  G+IFPV  SE
Sbjct: 61  GLLADEELERRKFYFLLPMELLYSVLTHEEMSSLNYKASRATKHASFNNLGKIFPV-FSE 120

Query: 121 LCIFPSDVNGLKSADGDGENNQSSKPVQRLMSKQRSWKPALETIAET 168
            C+FPS++  L++A+   +  + ++PV+R  SKQRSW+PALETI ET
Sbjct: 121 FCMFPSELKRLEAAN---QVVREAEPVER-YSKQRSWRPALETIDET 162

[Close]

BLAST of Cp4.1LG04g13600 vs. TrEMBL
Match: A0A0S3QWG4_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G003900 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 3.7e-44
Identity = 97/167 (58.08%), Postives = 128/167 (76.65%), Query Frame = 1


Query: 1   MGNSAFCAPSMASNGAAKVLTLDGNLQSFTKPVKAAELMIEHSGKFLCDSGDLKVGHRIP 60
           MGN+A C PS+ +NG  KVL LDG L+S+TKP++AAELM+E+ G+F+CDS  LKVGHRI 
Sbjct: 1   MGNAASCTPSLTANGVFKVLFLDGRLESYTKPIRAAELMLEYPGQFVCDSTYLKVGHRIQ 60

Query: 61  GLLTEEYLEGGRLYFLLPMDLLYSVLTIEEMSSLTYIATKALKRGNSSGFGRIFPVLISE 120
           GLL +E LE  + YFLLPM+LLYSVLT EEMSSL Y A++A K  + +  G+IFPV  SE
Sbjct: 61  GLLADEELERRKFYFLLPMELLYSVLTHEEMSSLNYKASRATKHASFNNLGKIFPV-FSE 120

Query: 121 LCIFPSDVNGLKSADGDGENNQSSKPVQRLMSKQRSWKPALETIAET 168
            C+FPS++  L++A+   +  + ++PV+R  SKQRSW+PALETI ET
Sbjct: 121 FCMFPSELKRLEAAN---QVVREAEPVER-YSKQRSWRPALETIDET 162

[Close]

BLAST of Cp4.1LG04g13600 vs. TrEMBL
Match: I1K5B3_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_05G246800 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 8.3e-44
Identity = 93/167 (55.69%), Postives = 123/167 (73.65%), Query Frame = 1


Query: 1   MGNSAFCAPSMASNGAAKVLTLDGNLQSFTKPVKAAELMIEHSGKFLCDSGDLKVGHRIP 60
           MGN A C PS+  NG  KVL LDG L+++TKP++AAELM+E+SG+F+CDS  LKVGHRI 
Sbjct: 1   MGNVASCTPSLTPNGVFKVLFLDGRLEAYTKPMRAAELMLEYSGQFVCDSSYLKVGHRIH 60

Query: 61  GLLTEEYLEGGRLYFLLPMDLLYSVLTIEEMSSLTYIATKALKRGNSSGFGRIFPVLISE 120
           GLL ++ LE  + YFLLP++LL+SVLT EEMSSL Y A++A K  + +  G+IFPV  SE
Sbjct: 61  GLLADDQLEKRKFYFLLPIELLFSVLTHEEMSSLNYKASRATKHASFNNLGKIFPV-FSE 120

Query: 121 LCIFPSDVNGLKSADGDGENNQSSKPVQRLMSKQRSWKPALETIAET 168
            C+FPS++  L+ AD   +  +  +P  +  SKQRSW+PALETI ET
Sbjct: 121 FCMFPSELKRLEEADNQLQVVRDPEPAVKRYSKQRSWRPALETIDET 166

[Close]

BLAST of Cp4.1LG04g13600 vs. TAIR10
Match: AT1G18290.1 (AT1G18290.1 unknown protein)

HSP 1 Score: 107.5 bits (267), Expect = 8.5e-24
Identity = 70/182 (38.46%), Postives = 103/182 (56.59%), Query Frame = 1


Query: 1   MGNSAFCAPSM----ASNGAAKVLT-LDGNLQSFTKPVKAAELMIEHSGKFLCDSGDLKV 60
           MGN++ CAP +    +S+G  K+L    G L+ F+KP+K ++++  HSG F+ DS  L++
Sbjct: 1   MGNTSSCAPLIISTNSSSGVVKILAPFTGTLEVFSKPIKTSDIVSRHSGHFITDSTLLQI 60

Query: 61  GHRIPGLLTEEYLEGGR-LYFLLPMDLLYSVLTIEEMSSLTYIATKALKRGNSSGFGRIF 120
            HR+  +  +EYL   R LY LLP D+L+SVLT EE+S ++  A + L +   +   RIF
Sbjct: 61  SHRVTAVSPDEYLRPRRHLYLLLPTDMLFSVLTQEELSLISNKAAETLNKSRYNHLKRIF 120

Query: 121 PVLISELCIF---------PSDVNGLKSADGDGENNQSSKPVQRLMSKQRSWKPALETIA 168
           PV     CIF         PS VN  ++ DG  E  ++        SK  SW+P LETI 
Sbjct: 121 PV-----CIFPMTGDRRRNPSSVNEDRAHDG-VEIRETLDEKVLYESKHGSWRPKLETIV 176

[Close]

BLAST of Cp4.1LG04g13600 vs. TAIR10
Match: AT5G66580.1 (AT5G66580.1 unknown protein)

HSP 1 Score: 68.9 bits (167), Expect = 3.3e-12
Identity = 48/154 (31.17%), Postives = 76/154 (49.35%), Query Frame = 1


Query: 16  AAKVLTLDGNLQSFTKPVKAAELMIEHSGKFLCDSGDLKVGHRIPGLLTEEYLEGGRLYF 75
           +AK++ LDG LQ F+ PVK  +++ ++   F+C+S ++     +  +   E L  G+LYF
Sbjct: 14  SAKLILLDGTLQEFSSPVKVWQILQKNPTSFVCNSDEMDFDDAVSAVAGNEELRSGQLYF 73

Query: 76  LLPMDLLYSVLTIEEMSSLTYIATKALKRGNSSGFGRIF---PVLISELCIFPSDVNGLK 135
           +LP+  L   L  EEM++L   A+ AL +  S G G +     V  SE      ++ G+K
Sbjct: 74  VLPLTWLNHPLRAEEMAALAVKASSALTK--SGGVGWVSGDDDVTTSEKTYQKKNIAGVK 133

Query: 136 SADGDGENNQSSKPVQRLMSKQRSWKPALETIAE 167
           +  G G      K         R +   L TIAE
Sbjct: 134 TNGGGGRGCGKGK---------RRFTANLSTIAE 156

[Close]

BLAST of Cp4.1LG04g13600 vs. TAIR10
Match: AT4G37240.1 (AT4G37240.1 unknown protein)

HSP 1 Score: 67.0 bits (162), Expect = 1.3e-11
Identity = 41/139 (29.50%), Postives = 70/139 (50.36%), Query Frame = 1


Query: 7   CAPSMASNGA-AKVLTLDGNLQSFTKPVKAAELMIEHSGKFLCDSGDLKVGHRIPGLLTE 66
           C+ S ++  A AK++  DG +  F  PVK   +++++   F+C+S D+     +  +  +
Sbjct: 4   CSSSESTQVATAKLILQDGRMMEFANPVKVGYVLLKYPMCFICNSDDMDFDDAVAAISAD 63

Query: 67  EYLEGGRLYFLLPMDLLYSVLTIEEMSSLTYIATKALKRGNSSGFGRIFPVLISELCIFP 126
           E L+ G++YF LP+  L   L  EEM++L   A+ AL RG   G  R         C+ P
Sbjct: 64  EELQLGQIYFALPLCWLRQPLKAEEMAALAVKASSALMRGGGGGCRR--------KCVEP 123

Query: 127 SDVNGLKSADGDGENNQSS 145
              + L+   G G++   S
Sbjct: 124 IVSDKLRMRVGSGDDTVGS 134

[Close]

BLAST of Cp4.1LG04g13600 vs. TAIR10
Match: AT3G50800.1 (AT3G50800.1 unknown protein)

HSP 1 Score: 60.5 bits (145), Expect = 1.2e-09
Identity = 31/93 (33.33%), Postives = 51/93 (54.84%), Query Frame = 1


Query: 17  AKVLTLDGNLQSFTKPVKAAELMIEHSGKFLCDSGDLKVGHRIPGLLTEEYLEGGRLYFL 76
           AK++  DG LQ F+ PVK  +++ ++   F+C+S D+     +  +   E L  G LYF+
Sbjct: 15  AKLILPDGTLQEFSTPVKVWQILQKNPTSFVCNSDDMDFDDAVLAVPGSEDLRPGELYFV 74

Query: 77  LPMDLLYSVLTIEEMSSLTYIATKALKRGNSSG 110
           LP+  L   L  +EM++L   A+ AL +    G
Sbjct: 75  LPLTWLNHPLRADEMAALAVKASSALAKSGGGG 107

[Close]

BLAST of Cp4.1LG04g13600 vs. TAIR10
Match: AT1G76600.1 (AT1G76600.1 unknown protein)

HSP 1 Score: 54.7 bits (130), Expect = 6.5e-08
Identity = 34/122 (27.87%), Postives = 65/122 (53.28%), Query Frame = 1


Query: 11  MASNGAAKVLTLDGNLQSFTKPVKAAELMIEHSGK----------FLCDSGDLKVGHRIP 70
           ++S+  AK++T++G+L+ +  PV A++++   S            FLC+S  L     IP
Sbjct: 13  VSSSTTAKIVTINGDLREYDVPVLASQVLESESTSSSSSSSSSSYFLCNSDSLYYDDFIP 72

Query: 71  GLLTEEYLEGGRLYFLLPMDLLYSVLTIEEMSSLTYIATKAL-----KRGNSSGFGRIFP 118
            + ++E L+  ++YF+LP+      L+  +M++L   A+ A+     K+      GRI P
Sbjct: 73  AIESDEILQANQIYFVLPISKRQYRLSASDMAALAVKASVAIEKAAGKKNRRRRSGRISP 132

[Close]

BLAST of Cp4.1LG04g13600 vs. NCBI nr
Match: gi|659107474|ref|XP_008453692.1| (PREDICTED: uncharacterized protein LOC103494340 [Cucumis melo])

HSP 1 Score: 276.6 bits (706), Expect = 3.0e-71
Identity = 144/170 (84.71%), Postives = 152/170 (89.41%), Query Frame = 1


Query: 1   MGNSAFCAPSMASNGAAKVLTLDGNLQSFTKPVKAAELMIEHSGKFLCDSGDLKVGHRIP 60
           MGNSA CAPS+ASNGAAKVL+LDG LQSFTKPV AAELMIEHSGKFLCDS DLKVGHRI 
Sbjct: 1   MGNSASCAPSIASNGAAKVLSLDGTLQSFTKPVTAAELMIEHSGKFLCDSSDLKVGHRIQ 60

Query: 61  GLLTEEYLEGGRLYFLLPMDLLYSVLTIEEMSSLTYIATKALKRGNSSGFGRIFPVLISE 120
           GLL +E LE  RLYFLLPMDLLYSVLT+EEMSSLT+IATKALK+GNSSGFGRIFPVLISE
Sbjct: 61  GLLPDEDLEWRRLYFLLPMDLLYSVLTLEEMSSLTFIATKALKQGNSSGFGRIFPVLISE 120

Query: 121 LCIFPSDVNGLKSADGDGENNQSSKPVQRLMSKQRSWKPALETIAETSCT 171
            C  P+DV GLK  D DGE NQSSK V+RLMSKQRSWKPALETIAETSCT
Sbjct: 121 FCNSPADVKGLKLEDDDGE-NQSSKAVKRLMSKQRSWKPALETIAETSCT 169

[Close]

BLAST of Cp4.1LG04g13600 vs. NCBI nr
Match: gi|449439158|ref|XP_004137354.1| (PREDICTED: uncharacterized protein LOC101203132 [Cucumis sativus])

HSP 1 Score: 274.2 bits (700), Expect = 1.5e-70
Identity = 141/170 (82.94%), Postives = 149/170 (87.65%), Query Frame = 1


Query: 1   MGNSAFCAPSMASNGAAKVLTLDGNLQSFTKPVKAAELMIEHSGKFLCDSGDLKVGHRIP 60
           MGNSA CAPSMASNGA KVL+LDG LQSF+KPV AAELMIEHSGKFLCDS DLKVGHRI 
Sbjct: 1   MGNSASCAPSMASNGAPKVLSLDGRLQSFSKPVTAAELMIEHSGKFLCDSSDLKVGHRIQ 60

Query: 61  GLLTEEYLEGGRLYFLLPMDLLYSVLTIEEMSSLTYIATKALKRGNSSGFGRIFPVLISE 120
           GLL +E LE  RLYFLLPMDLLYSVLT+EEMSSLT+IATKALK+GNSSGFGRIFPVLISE
Sbjct: 61  GLLPDEDLEWRRLYFLLPMDLLYSVLTLEEMSSLTFIATKALKQGNSSGFGRIFPVLISE 120

Query: 121 LCIFPSDVNGLKSADGDGENNQSSKPVQRLMSKQRSWKPALETIAETSCT 171
            C  P+DV GLK  D D   NQSSK V+RLMSKQRSWKPALETIAETSCT
Sbjct: 121 FCNSPADVKGLKLEDDDDRENQSSKAVKRLMSKQRSWKPALETIAETSCT 170

[Close]

BLAST of Cp4.1LG04g13600 vs. NCBI nr
Match: gi|566205847|ref|XP_002322115.2| (hypothetical protein POPTR_0015s04770g [Populus trichocarpa])

HSP 1 Score: 188.0 bits (476), Expect = 1.4e-44
Identity = 104/167 (62.28%), Postives = 124/167 (74.25%), Query Frame = 1


Query: 1   MGNSAFCAPSMASNGAAKVLTLDGNLQSFTKPVKAAELMIEHSGKFLCDSGDLKVGHRIP 60
           MGN+  CAPS+ SNG  KVLT  GNLQ +TKPVKAAELM+E+ G+F+CDS  LKVGHR+ 
Sbjct: 1   MGNATSCAPSIISNGVVKVLTNGGNLQIYTKPVKAAELMLENPGQFVCDSTSLKVGHRVH 60

Query: 61  GLLTEEYLEGGRLYFLLPMDLLYSVLTIEEMSSLTYIATKALKRGNSSGFGRIFPVLISE 120
           GLL ++ LE  + YF+LPM+LLYSVLT EEMSSLTY ATKALK  N   FG+IFPVL SE
Sbjct: 61  GLLADDQLERRQFYFVLPMELLYSVLTHEEMSSLTYKATKALKYNN---FGKIFPVL-SE 120

Query: 121 LCIFPSDVNGLKSADGDGENNQSSKPVQRLMSKQRSWKPALETIAET 168
            CIFPS+   + S   +       +P++R  SKQRSWKPALETI ET
Sbjct: 121 FCIFPSEGKTMDSMATE------PQPMER-YSKQRSWKPALETIVET 156

[Close]

BLAST of Cp4.1LG04g13600 vs. NCBI nr
Match: gi|920700149|gb|KOM43374.1| (hypothetical protein LR48_Vigan05g097800 [Vigna angularis])

HSP 1 Score: 186.0 bits (471), Expect = 5.3e-44
Identity = 97/167 (58.08%), Postives = 128/167 (76.65%), Query Frame = 1


Query: 1   MGNSAFCAPSMASNGAAKVLTLDGNLQSFTKPVKAAELMIEHSGKFLCDSGDLKVGHRIP 60
           MGN+A C PS+ +NG  KVL LDG L+S+TKP++AAELM+E+ G+F+CDS  LKVGHRI 
Sbjct: 1   MGNAASCTPSLTANGVFKVLFLDGRLESYTKPIRAAELMLEYPGQFVCDSTYLKVGHRIQ 60

Query: 61  GLLTEEYLEGGRLYFLLPMDLLYSVLTIEEMSSLTYIATKALKRGNSSGFGRIFPVLISE 120
           GLL +E LE  + YFLLPM+LLYSVLT EEMSSL Y A++A K  + +  G+IFPV  SE
Sbjct: 61  GLLADEELERRKFYFLLPMELLYSVLTHEEMSSLNYKASRATKHASFNNLGKIFPV-FSE 120

Query: 121 LCIFPSDVNGLKSADGDGENNQSSKPVQRLMSKQRSWKPALETIAET 168
            C+FPS++  L++A+   +  + ++PV+R  SKQRSW+PALETI ET
Sbjct: 121 FCMFPSELKRLEAAN---QVVREAEPVER-YSKQRSWRPALETIDET 162

[Close]

BLAST of Cp4.1LG04g13600 vs. NCBI nr
Match: gi|950934828|ref|XP_014515333.1| (PREDICTED: uncharacterized protein LOC106773150 [Vigna radiata var. radiata])

HSP 1 Score: 185.3 bits (469), Expect = 9.1e-44
Identity = 97/167 (58.08%), Postives = 127/167 (76.05%), Query Frame = 1


Query: 1   MGNSAFCAPSMASNGAAKVLTLDGNLQSFTKPVKAAELMIEHSGKFLCDSGDLKVGHRIP 60
           MGN+A C PS+ +NG  KVL LDG L+S+TKP++AAELM+E+ G+F+CDS  LKVGHRI 
Sbjct: 1   MGNAASCTPSLTANGVFKVLFLDGRLESYTKPIRAAELMLEYPGQFVCDSTYLKVGHRIQ 60

Query: 61  GLLTEEYLEGGRLYFLLPMDLLYSVLTIEEMSSLTYIATKALKRGNSSGFGRIFPVLISE 120
           GLL +E LE  + YFLLPM+LLYSVLT EEMSSL Y A++A K  + +  G+IFPV  SE
Sbjct: 61  GLLADEELERRKFYFLLPMELLYSVLTHEEMSSLNYKASRATKHASFNNLGKIFPV-FSE 120

Query: 121 LCIFPSDVNGLKSADGDGENNQSSKPVQRLMSKQRSWKPALETIAET 168
            C+FPS++  L++A+   +  +  +PV+R  SKQRSW+PALETI ET
Sbjct: 121 FCMFPSELKRLEAAN---QVIREPEPVER-YSKQRSWRPALETIDET 162

The following BLAST results are available for this feature:

BLAST of Cp4.1LG04g13600 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG04g13600 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LSX3_CUCSA	1.0e-70	82.94	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G025190 PE=4 SV=1	[more]
A9PEN7_POPTR	9.8e-45	62.28	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0015s04770g PE=2 SV=1	[more]
A0A0L9ULE0_PHAAN	3.7e-44	58.08	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan05g097800 PE=4 SV=1	[more]
A0A0S3QWG4_PHAAN	3.7e-44	58.08	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G003900 PE=...	[more]
I1K5B3_SOYBN	8.3e-44	55.69	Uncharacterized protein OS=Glycine max GN=GLYMA_05G246800 PE=4 SV=1	[more]

BLAST of Cp4.1LG04g13600 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G18290.1	8.5e-24	38.46	unknown protein	[more]
AT5G66580.1	3.3e-12	31.17	unknown protein	[more]
AT4G37240.1	1.3e-11	29.50	unknown protein	[more]
AT3G50800.1	1.2e-09	33.33	unknown protein	[more]
AT1G76600.1	6.5e-08	27.87	unknown protein	[more]

BLAST of Cp4.1LG04g13600 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659107474\|ref\|XP_008453692.1\|	3.0e-71	84.71	PREDICTED: uncharacterized protein LOC103494340 [Cucumis melo]	[more]
gi\|449439158\|ref\|XP_004137354.1\|	1.5e-70	82.94	PREDICTED: uncharacterized protein LOC101203132 [Cucumis sativus]	[more]
gi\|566205847\|ref\|XP_002322115.2\|	1.4e-44	62.28	hypothetical protein POPTR_0015s04770g [Populus trichocarpa]	[more]
gi\|920700149\|gb\|KOM43374.1\|	5.3e-44	58.08	hypothetical protein LR48_Vigan05g097800 [Vigna angularis]	[more]
gi\|950934828\|ref\|XP_014515333.1\|	9.1e-44	58.08	PREDICTED: uncharacterized protein LOC106773150 [Vigna radiata var. radiata]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR025322	DUF4228_plant

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0019521	D-gluconate metabolic process
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0006098	pentose-phosphate shunt
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0016832	aldehyde-lyase activity
molecular_function	GO:0051287	NAD binding
molecular_function	GO:0004616	phosphogluconate dehydrogenase (decarboxylating) activity
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG04g13600.1	Cp4.1LG04g13600.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 1..166 score: 1.2
None	No IPR available	PANTHER	PTHR33052	FAMILY NOT NAMED	coord: 2..170 score: 1.3
None	No IPR available	PANTHER	PTHR33052:SF22	F15H18.19	coord: 2..170 score: 1.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG04g13600	Cucsa.111680	Cucumber (Gy14) v1	cgycpeB0264
Cp4.1LG04g13600	CmaCh10G003340	Cucurbita maxima (Rimu)	cmacpeB092
Cp4.1LG04g13600	CmaCh11G003190	Cucurbita maxima (Rimu)	cmacpeB153
Cp4.1LG04g13600	CmoCh11G003240	Cucurbita moschata (Rifu)	cmocpeB129
Cp4.1LG04g13600	CmoCh10G003620	Cucurbita moschata (Rifu)	cmocpeB068
Cp4.1LG04g13600	Cla018912	Watermelon (97103) v1	cpewmB679
Cp4.1LG04g13600	Csa1G025190	Cucumber (Chinese Long) v2	cpecuB654
Cp4.1LG04g13600	MELO3C017371	Melon (DHL92) v3.5.1	cpemeB615
Cp4.1LG04g13600	ClCG06G014210	Watermelon (Charleston Gray)	cpewcgB616
Cp4.1LG04g13600	CSPI01G04470	Wild cucumber (PI 183967)	cpecpiB657
Cp4.1LG04g13600	Lsi06G012690	Bottle gourd (USVL1VR-Ls)	cpelsiB556
Cp4.1LG04g13600	MELO3C017371.2	Melon (DHL92) v3.6.1	cpemedB727
Cp4.1LG04g13600	CsaV3_1G004460	Cucumber (Chinese Long) v3	cpecucB0815
Cp4.1LG04g13600	Bhi02G000113	Wax gourd	cpewgoB0897
Cp4.1LG04g13600	CsGy1G004370	Cucumber (Gy14) v2	cgybcpeB127
Cp4.1LG04g13600	Carg15184	Silver-seed gourd	carcpeB1106
Cp4.1LG04g13600	Carg09095	Silver-seed gourd	carcpeB0847

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG04g13600	Cp4.1LG18g06620	Cucurbita pepo (Zucchini)	cpecpeB360

The following block(s) are covering this gene:

None