Carg15184 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg15184
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	DUF4228 domain protein
Location	Cucurbita_argyrosperma_scaffold_073 : 229375 .. 229884 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAACTCTGCGTCTTGTGTGCCTTCAATGGCCTCCAATGGCGCCGCGAAGGTCTTATCCTTAGACGGAAAATTGCAGAGCTACAGGAAGCCAGTGCAGGCCGCGGAACTAATGATCGAGCATTCCGGCAAATTCCTCTGCGATTCCGCTGATCTCAGCGTCGGCCACCGGATTCAAGGCCTTTTGCCAGACGAAGATCTCGAGTGCCGGCGATTGTACTTTCTACTTCCGATGGATCTTCTCTACTCCGTGCTAACGCTCGAAGAAATGAGATCTCTGACGTACACCGCCACAAAGGCTCTGAAACATGGAAATTCGAGTGGATTTGGAAGGATCTTCCCTGTTTTGATCACTGATCTCTGTATTTCTCTGTCGGATGTGAATCGATTGAAATCGGCGGACGGCGATCGAGAGAATCGAAGTTCGAAACCGGTGCAGAGATTGATGTCGAAACAGAGATCGTGGAAGCCCGCGCTCGAAACCATCGCTGAAACTTCGTGCGCTTAG

mRNA sequence

ATGGGGAACTCTGCGTCTTGTGTGCCTTCAATGGCCTCCAATGGCGCCGCGAAGGTCTTATCCTTAGACGGAAAATTGCAGAGCTACAGGAAGCCAGTGCAGGCCGCGGAACTAATGATCGAGCATTCCGGCAAATTCCTCTGCGATTCCGCTGATCTCAGCGTCGGCCACCGGATTCAAGGCCTTTTGCCAGACGAAGATCTCGAGTGCCGGCGATTGTACTTTCTACTTCCGATGGATCTTCTCTACTCCGTGCTAACGCTCGAAGAAATGAGATCTCTGACGTACACCGCCACAAAGGCTCTGAAACATGGAAATTCGAGTGGATTTGGAAGGATCTTCCCTGTTTTGATCACTGATCTCTGTATTTCTCTGTCGGATGTGAATCGATTGAAATCGGCGGACGGCGATCGAGAGAATCGAAGTTCGAAACCGGTGCAGAGATTGATGTCGAAACAGAGATCGTGGAAGCCCGCGCTCGAAACCATCGCTGAAACTTCGTGCGCTTAG

Coding sequence (CDS)

ATGGGGAACTCTGCGTCTTGTGTGCCTTCAATGGCCTCCAATGGCGCCGCGAAGGTCTTATCCTTAGACGGAAAATTGCAGAGCTACAGGAAGCCAGTGCAGGCCGCGGAACTAATGATCGAGCATTCCGGCAAATTCCTCTGCGATTCCGCTGATCTCAGCGTCGGCCACCGGATTCAAGGCCTTTTGCCAGACGAAGATCTCGAGTGCCGGCGATTGTACTTTCTACTTCCGATGGATCTTCTCTACTCCGTGCTAACGCTCGAAGAAATGAGATCTCTGACGTACACCGCCACAAAGGCTCTGAAACATGGAAATTCGAGTGGATTTGGAAGGATCTTCCCTGTTTTGATCACTGATCTCTGTATTTCTCTGTCGGATGTGAATCGATTGAAATCGGCGGACGGCGATCGAGAGAATCGAAGTTCGAAACCGGTGCAGAGATTGATGTCGAAACAGAGATCGTGGAAGCCCGCGCTCGAAACCATCGCTGAAACTTCGTGCGCTTAG

Protein sequence

MGNSASCVPSMASNGAAKVLSLDGKLQSYRKPVQAAELMIEHSGKFLCDSADLSVGHRIQGLLPDEDLECRRLYFLLPMDLLYSVLTLEEMRSLTYTATKALKHGNSSGFGRIFPVLITDLCISLSDVNRLKSADGDRENRSSKPVQRLMSKQRSWKPALETIAETSCA

Homology

[Close]

BLAST of Carg15184 vs. NCBI nr
Match: XP_022921761.1 (uncharacterized protein LOC111429917 [Cucurbita moschata])

HSP 1 Score: 330.5 bits (846), Expect = 3.4e-87
Identity = 167/169 (98.82%), Postives = 168/169 (99.41%), Query Frame = 0


Query: 1   MGNSASCVPSMASNGAAKVLSLDGKLQSYRKPVQAAELMIEHSGKFLCDSADLSVGHRIQ 60
           MGNSASC PSMASNGAAKVLSLDGKLQSYRKPVQAAELMIEHSGKFLCDSADLSVGHRIQ
Sbjct: 1   MGNSASCAPSMASNGAAKVLSLDGKLQSYRKPVQAAELMIEHSGKFLCDSADLSVGHRIQ 60

Query: 61  GLLPDEDLECRRLYFLLPMDLLYSVLTLEEMRSLTYTATKALKHGNSSGFGRIFPVLITD 120
           GLLPDEDLECRRLYFLLPMDLLYSVLT+EEMRSLTYTATKALKHGNSSGFGRIFPVLITD
Sbjct: 61  GLLPDEDLECRRLYFLLPMDLLYSVLTIEEMRSLTYTATKALKHGNSSGFGRIFPVLITD 120

Query: 121 LCISLSDVNRLKSADGDRENRSSKPVQRLMSKQRSWKPALETIAETSCA 170
           LCISLSDVNRLKSADGDRENRSSKPVQRLMSKQRSWKPALETIAETSCA
Sbjct: 121 LCISLSDVNRLKSADGDRENRSSKPVQRLMSKQRSWKPALETIAETSCA 169

[Close]

BLAST of Carg15184 vs. NCBI nr
Match: XP_022987495.1 (uncharacterized protein LOC111485040 [Cucurbita maxima])

HSP 1 Score: 325.5 bits (833), Expect = 1.1e-85
Identity = 166/169 (98.22%), Postives = 166/169 (98.22%), Query Frame = 0


Query: 1   MGNSASCVPSMASNGAAKVLSLDGKLQSYRKPVQAAELMIEHSGKFLCDSADLSVGHRIQ 60
           MGNSASC PSMASNGAAKVLSLDGKLQSY K VQAAELMIEHSGKFLCDSADLSVGHRIQ
Sbjct: 1   MGNSASCAPSMASNGAAKVLSLDGKLQSYTKRVQAAELMIEHSGKFLCDSADLSVGHRIQ 60

Query: 61  GLLPDEDLECRRLYFLLPMDLLYSVLTLEEMRSLTYTATKALKHGNSSGFGRIFPVLITD 120
           GLLPDEDLECRRLYFLLPMDLLYSVLTLEEMRSLTYTATKALKHGNSSGFGRIFPVLITD
Sbjct: 61  GLLPDEDLECRRLYFLLPMDLLYSVLTLEEMRSLTYTATKALKHGNSSGFGRIFPVLITD 120

Query: 121 LCISLSDVNRLKSADGDRENRSSKPVQRLMSKQRSWKPALETIAETSCA 170
           LCISLSDVNRLKSADGDRENRSSKPVQRLMSKQRSWKPALETIAETSCA
Sbjct: 121 LCISLSDVNRLKSADGDRENRSSKPVQRLMSKQRSWKPALETIAETSCA 169

[Close]

BLAST of Carg15184 vs. NCBI nr
Match: XP_023516747.1 (uncharacterized protein LOC111780552 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 313.5 bits (802), Expect = 4.3e-82
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 11  MASNGAAKVLSLDGKLQSYRKPVQAAELMIEHSGKFLCDSADLSVGHRIQGLLPDEDLEC 70
           MASNGAAKVLSLDGKLQSYRKPVQAAELMIEHSGKFLCDSADLSVGHRIQGLLPDEDLEC
Sbjct: 1   MASNGAAKVLSLDGKLQSYRKPVQAAELMIEHSGKFLCDSADLSVGHRIQGLLPDEDLEC 60

Query: 71  RRLYFLLPMDLLYSVLTLEEMRSLTYTATKALKHGNSSGFGRIFPVLITDLCISLSDVNR 130
           RRLYFLLPMDLLYSVLTLEEMRSLTYTATKALKHGNSSGFGRIFPVLITDLCISLSDVNR
Sbjct: 61  RRLYFLLPMDLLYSVLTLEEMRSLTYTATKALKHGNSSGFGRIFPVLITDLCISLSDVNR 120

Query: 131 LKSADGDRENRSSKPVQRLMSKQRSWKPALETIAETSCA 170
           LKSADGDRENRSSKPVQRLMSKQRSWKPALETIAETSCA
Sbjct: 121 LKSADGDRENRSSKPVQRLMSKQRSWKPALETIAETSCA 159

[Close]

BLAST of Carg15184 vs. NCBI nr
Match: XP_022135244.1 (uncharacterized protein LOC111007254 [Momordica charantia])

HSP 1 Score: 283.1 bits (723), Expect = 6.2e-73
Identity = 146/170 (85.88%), Postives = 153/170 (90.00%), Query Frame = 0


Query: 1   MGNSASCVPSMASNGAAKVLSLDGKLQSYRKPVQAAELMIEHSGKFLCDSADLSVGHRIQ 60
           MGNSASC PSM SNGAAKVLSLDGKL+SY KPV+AAELMIE+SGKFLCDS DL VGHRIQ
Sbjct: 24  MGNSASCAPSMVSNGAAKVLSLDGKLESYTKPVKAAELMIENSGKFLCDSGDLKVGHRIQ 83

Query: 61  GLLPDEDLECRRLYFLLPMDLLYSVLTLEEMRSLTYTATKALKHGNSSGFGRIFPVLITD 120
           GLLPDEDLECRRLYFLLPMDLLYSVLTLEEM SLTY ATKALK GNSSGFGRIFPVLI++
Sbjct: 84  GLLPDEDLECRRLYFLLPMDLLYSVLTLEEMSSLTYIATKALKQGNSSGFGRIFPVLISE 143

Query: 121 LCISLSDVNRLKSADGDR--ENRSSKPVQRLMSKQRSWKPALETIAETSC 169
           LCI  S+VNRLKS   DR  EN + KPVQRLMSKQRSWKPALETIAETSC
Sbjct: 144 LCILPSEVNRLKSEHSDRETENSTKKPVQRLMSKQRSWKPALETIAETSC 193

[Close]

BLAST of Carg15184 vs. NCBI nr
Match: XP_022965466.1 (uncharacterized protein LOC111465363 [Cucurbita maxima])

HSP 1 Score: 275.0 bits (702), Expect = 1.7e-70
Identity = 143/169 (84.62%), Postives = 151/169 (89.35%), Query Frame = 0


Query: 1   MGNSASCVPSMASNGAAKVLSLDGKLQSYRKPVQAAELMIEHSGKFLCDSADLSVGHRIQ 60
           MGNSA C PSMA NGAAKVL+LDG LQS+ KPV+AAELMIEHSGKFLCDS DL VGHRI 
Sbjct: 1   MGNSAFCAPSMAFNGAAKVLTLDGNLQSFTKPVKAAELMIEHSGKFLCDSGDLKVGHRIP 60

Query: 61  GLLPDEDLECRRLYFLLPMDLLYSVLTLEEMRSLTYTATKALKHGNSSGFGRIFPVLITD 120
           GLL +E LECRRLYFLLPMDLLYSVLT+EEM SLTY ATKALK GNSSGFGRIFPVLI++
Sbjct: 61  GLLTEEYLECRRLYFLLPMDLLYSVLTIEEMSSLTYIATKALKRGNSSGFGRIFPVLISE 120

Query: 121 LCISLSDVNRLKSADGDRE-NRSSKPVQRLMSKQRSWKPALETIAETSC 169
           LCI  SDVN LKSADGD E N+SSKPVQRLMSKQRSWKPALETIAETSC
Sbjct: 121 LCIFPSDVNGLKSADGDGENNQSSKPVQRLMSKQRSWKPALETIAETSC 169

[Close]

BLAST of Carg15184 vs. TAIR10
Match: AT1G18290.1 (unknown protein)

HSP 1 Score: 104.4 bits (259), Expect = 7.1e-23
Identity = 66/176 (37.50%), Postives = 98/176 (55.68%), Query Frame = 0


Query: 1   MGNSASCVP----SMASNGAAKVLS-LDGKLQSYRKPVQAAELMIEHSGKFLCDSADLSV 60
           MGN++SC P    + +S+G  K+L+   G L+ + KP++ ++++  HSG F+ DS  L +
Sbjct: 1   MGNTSSCAPLIISTNSSSGVVKILAPFTGTLEVFSKPIKTSDIVSRHSGHFITDSTLLQI 60

Query: 61  GHRIQGLLPDEDLECRR-LYFLLPMDLLYSVLTLEEMRSLTYTATKALKHGNSSGFGRIF 120
            HR+  + PDE L  RR LY LLP D+L+SVLT EE+  ++  A + L     +   RIF
Sbjct: 61  SHRVTAVSPDEYLRPRRHLYLLLPTDMLFSVLTQEELSLISNKAAETLNKSRYNHLKRIF 120

Query: 121 PVLI----TDLCISLSDVNRLKSADGDRENRSSKPVQRLMSKQRSWKPALETIAET 167
           PV I     D   + S VN  ++ DG     +        SK  SW+P LETI E+
Sbjct: 121 PVCIFPMTGDRRRNPSSVNEDRAHDGVEIRETLDEKVLYESKHGSWRPKLETIVES 176

[Close]

BLAST of Carg15184 vs. TAIR10
Match: AT3G03280.1 (unknown protein)

HSP 1 Score: 60.1 bits (144), Expect = 1.5e-09
Identity = 54/175 (30.86%), Postives = 80/175 (45.71%), Query Frame = 0


Query: 1   MGNSASC-VPSMASNGAAKVLSLDGKLQSYRKPVQAAELMIEHSGKFLCDSADLSVGHRI 60
           MGN  SC +   +S+  AKV+  DG ++    P +AAELM+E    FL D+  + VG + 
Sbjct: 1   MGNYVSCALNKTSSSPLAKVILPDGGVRDIHVPTKAAELMMEMPSYFLVDTKSVKVGRKF 60

Query: 61  QGLLPDEDLECR--RLYFLLPMDLLYSVLTLEEMRSLTYTATKALKHGNSSGFGRIFP-- 120
             L  D+DL+     +Y   PM    S     +M  L  T  K  K   + G  R+ P  
Sbjct: 61  IPLAADDDLDLGGCHVYVAFPMTRATSAANASDMARLYLTGKKRTK---NCGHRRVSPEN 120

Query: 121 -----VLITDLCISLSDVNRLKSADGDRENRSSKPVQRLMSKQRSWKPALETIAE 166
                V +    ++L D+    +A+          + R+ S  +S KP LETIAE
Sbjct: 121 EDNDDVRLIGPKLNLEDIEEFSAAEF---------IHRI-SVSKSKKPQLETIAE 162

[Close]

BLAST of Carg15184 vs. TAIR10
Match: AT5G66580.1 (unknown protein)

HSP 1 Score: 58.5 bits (140), Expect = 4.5e-09
Identity = 29/95 (30.53%), Postives = 53/95 (55.79%), Query Frame = 0


Query: 16  AAKVLSLDGKLQSYRKPVQAAELMIEHSGKFLCDSADLSVGHRIQGLLPDEDLECRRLYF 75
           +AK++ LDG LQ +  PV+  +++ ++   F+C+S ++     +  +  +E+L   +LYF
Sbjct: 14  SAKLILLDGTLQEFSSPVKVWQILQKNPTSFVCNSDEMDFDDAVSAVAGNEELRSGQLYF 73

Query: 76  LLPMDLLYSVLTLEEMRSLTYTATKALKHGNSSGF 111
           +LP+  L   L  EEM +L   A+ AL      G+
Sbjct: 74  VLPLTWLNHPLRAEEMAALAVKASSALTKSGGVGW 108

[Close]

BLAST of Carg15184 vs. TAIR10
Match: AT4G37240.1 (unknown protein)

HSP 1 Score: 52.8 bits (125), Expect = 2.5e-07
Identity = 24/83 (28.92%), Postives = 47/83 (56.63%), Query Frame = 0


Query: 17  AKVLSLDGKLQSYRKPVQAAELMIEHSGKFLCDSADLSVGHRIQGLLPDEDLECRRLYFL 76
           AK++  DG++  +  PV+   +++++   F+C+S D+     +  +  DE+L+  ++YF 
Sbjct: 15  AKLILQDGRMMEFANPVKVGYVLLKYPMCFICNSDDMDFDDAVAAISADEELQLGQIYFA 74

Query: 77  LPMDLLYSVLTLEEMRSLTYTAT 100
           LP+  L   L  EEM +L   A+
Sbjct: 75  LPLCWLRQPLKAEEMAALAVKAS 97

[Close]

BLAST of Carg15184 vs. TAIR10
Match: AT1G28190.1 (unknown protein)

HSP 1 Score: 42.0 bits (97), Expect = 4.3e-04
Identity = 29/87 (33.33%), Postives = 42/87 (48.28%), Query Frame = 0


Query: 9   PSMASNGA-AKVLSLDGKLQSYRKPVQAAELMIEHSGKFLCDSADLSVGHRIQGLLPDED 68
           P   SNG   K++  DG LQ Y +PV  +EL  +     +C S  L +G +   L   E 
Sbjct: 30  PDRTSNGGRIKLVRSDGSLQVYDRPVVVSELTKDFPKHKICRSDLLYIGQKTPVLSETET 89

Query: 69  LECRRLYFLLPMDLLYSVLTLEEMRSL 95
           L+    YFLLP D   + L+   + +L
Sbjct: 90  LKLGLNYFLLPSDFFKNDLSFLTIATL 116

[Close]

BLAST of Carg15184 vs. TrEMBL
Match: tr|A0A1S3BY23|A0A1S3BY23_CUCME (uncharacterized protein LOC103494340 OS=Cucumis melo OX=3656 GN=LOC103494340 PE=4 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 1.2e-69
Identity = 140/168 (83.33%), Postives = 149/168 (88.69%), Query Frame = 0


Query: 1   MGNSASCVPSMASNGAAKVLSLDGKLQSYRKPVQAAELMIEHSGKFLCDSADLSVGHRIQ 60
           MGNSASC PS+ASNGAAKVLSLDG LQS+ KPV AAELMIEHSGKFLCDS+DL VGHRIQ
Sbjct: 1   MGNSASCAPSIASNGAAKVLSLDGTLQSFTKPVTAAELMIEHSGKFLCDSSDLKVGHRIQ 60

Query: 61  GLLPDEDLECRRLYFLLPMDLLYSVLTLEEMRSLTYTATKALKHGNSSGFGRIFPVLITD 120
           GLLPDEDLE RRLYFLLPMDLLYSVLTLEEM SLT+ ATKALK GNSSGFGRIFPVLI++
Sbjct: 61  GLLPDEDLEWRRLYFLLPMDLLYSVLTLEEMSSLTFIATKALKQGNSSGFGRIFPVLISE 120

Query: 121 LCISLSDVNRLKSADGDRENRSSKPVQRLMSKQRSWKPALETIAETSC 169
            C S +DV  LK  D D EN+SSK V+RLMSKQRSWKPALETIAETSC
Sbjct: 121 FCNSPADVKGLKLEDDDGENQSSKAVKRLMSKQRSWKPALETIAETSC 168

[Close]

BLAST of Carg15184 vs. TrEMBL
Match: tr|A0A0A0LSX3|A0A0A0LSX3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025190 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 2.1e-69
Identity = 141/169 (83.43%), Postives = 150/169 (88.76%), Query Frame = 0


Query: 1   MGNSASCVPSMASNGAAKVLSLDGKLQSYRKPVQAAELMIEHSGKFLCDSADLSVGHRIQ 60
           MGNSASC PSMASNGA KVLSLDG+LQS+ KPV AAELMIEHSGKFLCDS+DL VGHRIQ
Sbjct: 1   MGNSASCAPSMASNGAPKVLSLDGRLQSFSKPVTAAELMIEHSGKFLCDSSDLKVGHRIQ 60

Query: 61  GLLPDEDLECRRLYFLLPMDLLYSVLTLEEMRSLTYTATKALKHGNSSGFGRIFPVLITD 120
           GLLPDEDLE RRLYFLLPMDLLYSVLTLEEM SLT+ ATKALK GNSSGFGRIFPVLI++
Sbjct: 61  GLLPDEDLEWRRLYFLLPMDLLYSVLTLEEMSSLTFIATKALKQGNSSGFGRIFPVLISE 120

Query: 121 LCISLSDVNRLK-SADGDRENRSSKPVQRLMSKQRSWKPALETIAETSC 169
            C S +DV  LK   D DREN+SSK V+RLMSKQRSWKPALETIAETSC
Sbjct: 121 FCNSPADVKGLKLEDDDDRENQSSKAVKRLMSKQRSWKPALETIAETSC 169

[Close]

BLAST of Carg15184 vs. TrEMBL
Match: tr|A0A0L9ULE0|A0A0L9ULE0_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan05g097800 PE=4 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 8.0e-45
Identity = 98/166 (59.04%), Postives = 130/166 (78.31%), Query Frame = 0


Query: 1   MGNSASCVPSMASNGAAKVLSLDGKLQSYRKPVQAAELMIEHSGKFLCDSADLSVGHRIQ 60
           MGN+ASC PS+ +NG  KVL LDG+L+SY KP++AAELM+E+ G+F+CDS  L VGHRIQ
Sbjct: 1   MGNAASCTPSLTANGVFKVLFLDGRLESYTKPIRAAELMLEYPGQFVCDSTYLKVGHRIQ 60

Query: 61  GLLPDEDLECRRLYFLLPMDLLYSVLTLEEMRSLTYTATKALKHGNSSGFGRIFPVLITD 120
           GLL DE+LE R+ YFLLPM+LLYSVLT EEM SL Y A++A KH + +  G+IFPV  ++
Sbjct: 61  GLLADEELERRKFYFLLPMELLYSVLTHEEMSSLNYKASRATKHASFNNLGKIFPV-FSE 120

Query: 121 LCISLSDVNRLKSADGDRENRSSKPVQRLMSKQRSWKPALETIAET 167
            C+  S++ RL++A  ++  R ++PV+R  SKQRSW+PALETI ET
Sbjct: 121 FCMFPSELKRLEAA--NQVVREAEPVER-YSKQRSWRPALETIDET 162

[Close]

BLAST of Carg15184 vs. TrEMBL
Match: tr|A0A0S3QWG4|A0A0S3QWG4_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.01G003900 PE=4 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 8.0e-45
Identity = 98/166 (59.04%), Postives = 130/166 (78.31%), Query Frame = 0


Query: 1   MGNSASCVPSMASNGAAKVLSLDGKLQSYRKPVQAAELMIEHSGKFLCDSADLSVGHRIQ 60
           MGN+ASC PS+ +NG  KVL LDG+L+SY KP++AAELM+E+ G+F+CDS  L VGHRIQ
Sbjct: 1   MGNAASCTPSLTANGVFKVLFLDGRLESYTKPIRAAELMLEYPGQFVCDSTYLKVGHRIQ 60

Query: 61  GLLPDEDLECRRLYFLLPMDLLYSVLTLEEMRSLTYTATKALKHGNSSGFGRIFPVLITD 120
           GLL DE+LE R+ YFLLPM+LLYSVLT EEM SL Y A++A KH + +  G+IFPV  ++
Sbjct: 61  GLLADEELERRKFYFLLPMELLYSVLTHEEMSSLNYKASRATKHASFNNLGKIFPV-FSE 120

Query: 121 LCISLSDVNRLKSADGDRENRSSKPVQRLMSKQRSWKPALETIAET 167
            C+  S++ RL++A  ++  R ++PV+R  SKQRSW+PALETI ET
Sbjct: 121 FCMFPSELKRLEAA--NQVVREAEPVER-YSKQRSWRPALETIDET 162

[Close]

BLAST of Carg15184 vs. TrEMBL
Match: tr|A0A1S3VAF3|A0A1S3VAF3_VIGRR (uncharacterized protein LOC106773150 OS=Vigna radiata var. radiata OX=3916 GN=LOC106773150 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 1.4e-44
Identity = 98/166 (59.04%), Postives = 129/166 (77.71%), Query Frame = 0


Query: 1   MGNSASCVPSMASNGAAKVLSLDGKLQSYRKPVQAAELMIEHSGKFLCDSADLSVGHRIQ 60
           MGN+ASC PS+ +NG  KVL LDG+L+SY KP++AAELM+E+ G+F+CDS  L VGHRIQ
Sbjct: 1   MGNAASCTPSLTANGVFKVLFLDGRLESYTKPIRAAELMLEYPGQFVCDSTYLKVGHRIQ 60

Query: 61  GLLPDEDLECRRLYFLLPMDLLYSVLTLEEMRSLTYTATKALKHGNSSGFGRIFPVLITD 120
           GLL DE+LE R+ YFLLPM+LLYSVLT EEM SL Y A++A KH + +  G+IFPV  ++
Sbjct: 61  GLLADEELERRKFYFLLPMELLYSVLTHEEMSSLNYKASRATKHASFNNLGKIFPV-FSE 120

Query: 121 LCISLSDVNRLKSADGDRENRSSKPVQRLMSKQRSWKPALETIAET 167
            C+  S++ RL++A  ++  R  +PV+R  SKQRSW+PALETI ET
Sbjct: 121 FCMFPSELKRLEAA--NQVIREPEPVER-YSKQRSWRPALETIDET 162

The following BLAST results are available for this feature:

BLAST of Carg15184 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022921761.1	3.4e-87	98.82	uncharacterized protein LOC111429917 [Cucurbita moschata]	[more]
XP_022987495.1	1.1e-85	98.22	uncharacterized protein LOC111485040 [Cucurbita maxima]	[more]
XP_023516747.1	4.3e-82	100.00	uncharacterized protein LOC111780552 [Cucurbita pepo subsp. pepo]	[more]
XP_022135244.1	6.2e-73	85.88	uncharacterized protein LOC111007254 [Momordica charantia]	[more]
XP_022965466.1	1.7e-70	84.62	uncharacterized protein LOC111465363 [Cucurbita maxima]	[more]

BLAST of Carg15184 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G18290.1	7.1e-23	37.50	unknown protein	[more]
AT3G03280.1	1.5e-09	30.86	unknown protein	[more]
AT5G66580.1	4.5e-09	30.53	unknown protein	[more]
AT4G37240.1	2.5e-07	28.92	unknown protein	[more]
AT1G28190.1	4.3e-04	33.33	unknown protein	[more]

BLAST of Carg15184 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg15184 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BY23\|A0A1S3BY23_CUCME	1.2e-69	83.33	uncharacterized protein LOC103494340 OS=Cucumis melo OX=3656 GN=LOC103494340 PE=...	[more]
tr\|A0A0A0LSX3\|A0A0A0LSX3_CUCSA	2.1e-69	83.43	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025190 PE=4 SV=1	[more]
tr\|A0A0L9ULE0\|A0A0L9ULE0_PHAAN	8.0e-45	59.04	Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan05g097800 PE...	[more]
tr\|A0A0S3QWG4\|A0A0S3QWG4_PHAAN	8.0e-45	59.04	Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.01G...	[more]
tr\|A0A1S3VAF3\|A0A1S3VAF3_VIGRR	1.4e-44	59.04	uncharacterized protein LOC106773150 OS=Vigna radiata var. radiata OX=3916 GN=LO...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR025322	DUF4228_plant

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg15184-RA	Carg15184-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 1..165 e-value: 7.0E-33 score: 114.5
None	No IPR available	PANTHER	PTHR33052	FAMILY NOT NAMED	coord: 1..166
None	No IPR available	PANTHER	PTHR33052:SF22	F15H18.19	coord: 1..166

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg15184	Cla018912	Watermelon (97103) v1	carwmB0789
Carg15184	Csa1G025190	Cucumber (Chinese Long) v2	carcuB0801
Carg15184	MELO3C017371	Melon (DHL92) v3.5.1	carmeB0785
Carg15184	ClCG06G014210	Watermelon (Charleston Gray)	carwcgB0764
Carg15184	CSPI01G04470	Wild cucumber (PI 183967)	carcpiB0821
Carg15184	Cucsa.111680	Cucumber (Gy14) v1	carcgyB0897
Carg15184	CmaCh11G003190	Cucurbita maxima (Rimu)	carcmaB1092
Carg15184	CmoCh10G003620	Cucurbita moschata (Rifu)	carcmoB1063
Carg15184	CmoCh11G003240	Cucurbita moschata (Rifu)	carcmoB1064
Carg15184	Lsi06G012690	Bottle gourd (USVL1VR-Ls)	carlsiB726
Carg15184	Cp4.1LG04g13600	Cucurbita pepo (Zucchini)	carcpeB1106
Carg15184	Cp4.1LG18g06620	Cucurbita pepo (Zucchini)	carcpeB1103
Carg15184	CsGy1G004370	Cucumber (Gy14) v2	carcgybB0778
Carg15184	MELO3C017371.2	Melon (DHL92) v3.6.1	carmedB0797
Carg15184	CsaV3_1G004460	Cucumber (Chinese Long) v3	carcucB0824
Carg15184	Cla97C06G123670	Watermelon (97103) v2	carwmbB0827
Carg15184	Bhi02G000113	Wax gourd	carwgoB0924

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg15184	Carg09095	Silver-seed gourd	carcarB537

The following block(s) are covering this gene:


Gene	Organism	Block
Carg15184	Silver-seed gourd	carcarB616
Carg15184	Cucurbita maxima (Rimu)	carcmaB1091
Carg15184	Cucurbita maxima (Rimu)	carcmaB1095