CmoCh10G003620 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGAATTCTGCGTCTTGTGCGCCTTCAATGGCCTCCAATGGCGCCGCGAAGGTCTTATCCTTAGACGGAAAATTGCAGAGCTACAGGAAGCCAGTGCAGGCCGCGGAACTAATGATCGAGCATTCCGGCAAATTCCTCTGCGATTCCGCTGATCTCAGCGTCGGCCACCGGATTCAAGGCCTTTTGCCAGACGAAGATCTCGAGTGCCGGCGATTGTACTTTCTACTTCCGATGGATCTCCTCTACTCCGTGCTAACGATCGAAGAAATGAGATCTCTGACGTACACCGCTACAAAGGCTCTGAAACATGGAAATTCGAGTGGATTTGGAAGGATCTTCCCTGTTTTGATCACTGATCTCTGTATTTCTCTGTCGGATGTGAATCGATTGAAATCGGCGGACGGCGATCGAGAGAATCGAAGTTCGAAACCGGTGCAGAGATTGATGTCGAAACAGAGATCGTGGAAGCCTGCGCTCGAAACCATCGCTGAAACTTCGTGCGCGTAG ATGGGGAATTCTGCGTCTTGTGCGCCTTCAATGGCCTCCAATGGCGCCGCGAAGGTCTTATCCTTAGACGGAAAATTGCAGAGCTACAGGAAGCCAGTGCAGGCCGCGGAACTAATGATCGAGCATTCCGGCAAATTCCTCTGCGATTCCGCTGATCTCAGCGTCGGCCACCGGATTCAAGGCCTTTTGCCAGACGAAGATCTCGAGTGCCGGCGATTGTACTTTCTACTTCCGATGGATCTCCTCTACTCCGTGCTAACGATCGAAGAAATGAGATCTCTGACGTACACCGCTACAAAGGCTCTGAAACATGGAAATTCGAGTGGATTTGGAAGGATCTTCCCTGTTTTGATCACTGATCTCTGTATTTCTCTGTCGGATGTGAATCGATTGAAATCGGCGGACGGCGATCGAGAGAATCGAAGTTCGAAACCGGTGCAGAGATTGATGTCGAAACAGAGATCGTGGAAGCCTGCGCTCGAAACCATCGCTGAAACTTCGTGCGCGTAG ATGGGGAATTCTGCGTCTTGTGCGCCTTCAATGGCCTCCAATGGCGCCGCGAAGGTCTTATCCTTAGACGGAAAATTGCAGAGCTACAGGAAGCCAGTGCAGGCCGCGGAACTAATGATCGAGCATTCCGGCAAATTCCTCTGCGATTCCGCTGATCTCAGCGTCGGCCACCGGATTCAAGGCCTTTTGCCAGACGAAGATCTCGAGTGCCGGCGATTGTACTTTCTACTTCCGATGGATCTCCTCTACTCCGTGCTAACGATCGAAGAAATGAGATCTCTGACGTACACCGCTACAAAGGCTCTGAAACATGGAAATTCGAGTGGATTTGGAAGGATCTTCCCTGTTTTGATCACTGATCTCTGTATTTCTCTGTCGGATGTGAATCGATTGAAATCGGCGGACGGCGATCGAGAGAATCGAAGTTCGAAACCGGTGCAGAGATTGATGTCGAAACAGAGATCGTGGAAGCCTGCGCTCGAAACCATCGCTGAAACTTCGTGCGCGTAG
BLAST of CmoCh10G003620 vs. TrEMBL
Match: A0A0A0LSX3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G025190 PE=4 SV=1) HSP 1 Score: 271.2 bits (692), Expect = 8.7e-70 Identity = 141/169 (83.43%), Postives = 151/169 (89.35%), Query Frame = 1
BLAST of CmoCh10G003620 vs. TrEMBL
Match: A0A0S3QWG4_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G003900 PE=4 SV=1) HSP 1 Score: 188.7 bits (478), Expect = 5.7e-45 Identity = 98/166 (59.04%), Postives = 130/166 (78.31%), Query Frame = 1
BLAST of CmoCh10G003620 vs. TrEMBL
Match: A0A0L9ULE0_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan05g097800 PE=4 SV=1) HSP 1 Score: 188.7 bits (478), Expect = 5.7e-45 Identity = 98/166 (59.04%), Postives = 130/166 (78.31%), Query Frame = 1
BLAST of CmoCh10G003620 vs. TrEMBL
Match: V7CQQ6_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G330900g PE=4 SV=1) HSP 1 Score: 185.7 bits (470), Expect = 4.8e-44 Identity = 97/166 (58.43%), Postives = 128/166 (77.11%), Query Frame = 1
BLAST of CmoCh10G003620 vs. TrEMBL
Match: A0A151TK72_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_023781 PE=4 SV=1) HSP 1 Score: 184.5 bits (467), Expect = 1.1e-43 Identity = 97/166 (58.43%), Postives = 125/166 (75.30%), Query Frame = 1
BLAST of CmoCh10G003620 vs. TAIR10
Match: AT1G18290.1 (AT1G18290.1 unknown protein) HSP 1 Score: 105.1 bits (261), Expect = 4.2e-23 Identity = 67/176 (38.07%), Postives = 99/176 (56.25%), Query Frame = 1
BLAST of CmoCh10G003620 vs. TAIR10
Match: AT5G66580.1 (AT5G66580.1 unknown protein) HSP 1 Score: 58.9 bits (141), Expect = 3.4e-09 Identity = 29/95 (30.53%), Postives = 53/95 (55.79%), Query Frame = 1
BLAST of CmoCh10G003620 vs. TAIR10
Match: AT3G50800.1 (AT3G50800.1 unknown protein) HSP 1 Score: 55.1 bits (131), Expect = 5.0e-08 Identity = 29/93 (31.18%), Postives = 48/93 (51.61%), Query Frame = 1
BLAST of CmoCh10G003620 vs. TAIR10
Match: AT1G76600.1 (AT1G76600.1 unknown protein) HSP 1 Score: 48.1 bits (113), Expect = 6.1e-06 Identity = 34/122 (27.87%), Postives = 60/122 (49.18%), Query Frame = 1
BLAST of CmoCh10G003620 vs. NCBI nr
Match: gi|659107474|ref|XP_008453692.1| (PREDICTED: uncharacterized protein LOC103494340 [Cucumis melo]) HSP 1 Score: 271.9 bits (694), Expect = 7.3e-70 Identity = 140/168 (83.33%), Postives = 150/168 (89.29%), Query Frame = 1
BLAST of CmoCh10G003620 vs. NCBI nr
Match: gi|449439158|ref|XP_004137354.1| (PREDICTED: uncharacterized protein LOC101203132 [Cucumis sativus]) HSP 1 Score: 271.2 bits (692), Expect = 1.2e-69 Identity = 141/169 (83.43%), Postives = 151/169 (89.35%), Query Frame = 1
BLAST of CmoCh10G003620 vs. NCBI nr
Match: gi|920700149|gb|KOM43374.1| (hypothetical protein LR48_Vigan05g097800 [Vigna angularis]) HSP 1 Score: 188.7 bits (478), Expect = 8.2e-45 Identity = 98/166 (59.04%), Postives = 130/166 (78.31%), Query Frame = 1
BLAST of CmoCh10G003620 vs. NCBI nr
Match: gi|950934828|ref|XP_014515333.1| (PREDICTED: uncharacterized protein LOC106773150 [Vigna radiata var. radiata]) HSP 1 Score: 188.0 bits (476), Expect = 1.4e-44 Identity = 98/166 (59.04%), Postives = 129/166 (77.71%), Query Frame = 1
BLAST of CmoCh10G003620 vs. NCBI nr
Match: gi|593795019|ref|XP_007160548.1| (hypothetical protein PHAVU_002G330900g [Phaseolus vulgaris]) HSP 1 Score: 185.7 bits (470), Expect = 6.9e-44 Identity = 97/166 (58.43%), Postives = 128/166 (77.11%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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