CsaV3_1G004460 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_1G004460
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	DUF4228 domain protein
Location	chr1 : 2806311 .. 2811412 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAATTCAGCTTCTTGTGCTCCTTCAATGGCCTCCAATGGCGCCCCAAAGGTTTTATCCTTAGATGGAAGATTACAGAGCTTCTCAAAGCCAGTGACGGCCGCCGAACTAATGATCGAGCATTCCGGTAAATTCCTATGCGATTCCAGCGATCTTAAAGTCGGCCATCGGATTCAAGGTCTATTACCGGATGAAGATCTGGAATGGCGGCGATTATACTTTCTTCTTCCGATGGATCTTCTTTACTCTGTTCTAACACTGGAAGAAATGAGTTCTCTGACTTTCATCGCTACAAAGGCTTTGAAACAGGGAAATTCGAGCGGATTTGGGAGGATTTTTCCTGTTTTAATCAGTGAGTTTTGTAATTCTCCGGCGGATGTGAAGGGATTGAAATTGGAAGATGATGATGATCGAGAGAATCAAAGTTCGAAGGCGGTAAAGAGATTGATGTCGAAACAGAGATCGTGGAAGCCGGCGCTTGAAACAATTGCTGAAACTTCGTGCACATAGAAGGAAAACAGAAGGGGAATTCGGAATAATGGGGAAAAATGTATGAGATTAATTTACATTTACGAATAATTGGGTAGCGTTTTTGGTTGGATCAATGGTAGTTGATAGAGATGAGATGAGTGGATAAATAAACAGAGATCTTGAAAGTTTGTTTATTCTTATACATTATTCTTTTTCTCTTTCTTAGGCTTATGATGAACACATTCTTCTTATTGATTGATTTATTTATGTAGAACAACACGTTAAGTGCTTCCAATCTTCCCAAATTATTTTCTGAAGTGGGTTGTGAGAAAAAAGAAACAAAGACGATCTCCGTAGATGCACTAACTATTACCTATCTAAATATTATTATCTAACTCACTTTCTTCTATTGTTTTTTTCGTTATTTAAAAGAAGTAATTAAAAAAAATATCATTTTAAAAAATGGTACAATAAATTAAAATATTTATAAATTATAACAAAAACATTATCTGATAAAATATTGTTAAATTTATTATTTTTGTCCATTACCTATTAAAAAAACTTATTTTATATAGATTATTTATTTATTAACTTAAAATACTTTAAATTTTAAACTTATCTATGAAAACTAAAACGTTATGAATTATGATATTTATAAGTTTGAATATATCTTTAATGATATTAGAAATTCGAGTAGGATTGAATCAACCCATATTTTAAAAAATATCATCAATAAAGGGTTGATTGGATAGTATCGATTGTTGGATTATTTGAACACGTCTAATAAACATTAGCCATCACGAGAATTATTTCCACCAATTTTCTTTTCTTTACAAAAAAACGTTGTCCTCCCATTTCTTAAAAGAAATTAAGAAGAAGATAATTAAAAGAAAAAAATGAAATTGCCACGTGGTAGCATTATATTGGATATATTAGTAGTGTAAAAATAAACCAAATAAATGAAAGATGTAAGGAATATAATGGGGGAAGTTTAGTTTACAAATATACCAATGTCAAAGTAAAATTTAGGAAACAACATTTGATAAAAGCAAAAATTTATAGTGGGAGATCCCAAAAACTAAAGGTAGATTTTAATTTTTCATTAATAAAACTTTGAGATTTATGTTTTCCTTTTTAAATACTACTTTCTTTGTTTTTTGGGTTAGTTTCTATTTGGTTTTGAGGTTTCAAAAACCAAAATTCATCAGTTTCTTTTTAGTTTAATTAAGTGTTTTTTTCCTATATTTTTTAAATAGTTTTATTTTTTTATACATAACAATTCCCCTCTCAAAATGTTAGACAATAAAATCTATTTGGTAACCATTTCAAGTTTAGTTTTTAAAATTTAGCATATTTTCTATCCATTTTTAAAAATAATTTACATATTTATTCAACCATTTTTAGCCAAATTTCAAAGAAAAACAAATTATTTATTTAAAACTTTTTTTTTTCAATTTCAAGATTTGACTTATATTTTTTAAACAATGGAAGAAAGTAGATAATTGTTCACACGAGATTTCAAGAAAATGTATTTCGTGGAATTGAACTTTGTATATTGATAAATATTGTGAATATAGTCTCTAGTATTTACTCCTTTGATGTTTTTTCTTGAATACAAGTTAAAAATTTATAACTTCTTGGTCTTAAAGACATCGTAATTGCAAGTTGATTTGAACATGATCATTTGGAATCCAATAAAATTTTAATCTTCAAAGTCTCCGATATTTCATAAGATGTTAATCTTGAGATTGATACAAACTTGCACTTCTTGAGAGCTTGTACAAGTTTAAATTTTTAATTCTTAAGAGCTTTGAATATTTCAGCGTTTTAATTTGAGGTCTATATTTATATAGAATTTTCATGAGCTTTAGTTAACTTGGATCCATTTGCTTGTTGGGCTTGTACTTGAGCTTGGGTCAATTTGTCTGTTAGACTTGGATTTGGACCCAATTTTCTATTCGATTTGGACATGGGCTTGGAACAATTATTTATTTGGTCCAATTTTTACATTGGAGGCTTGAATTTGGTTGAATACGAGAAAATTTAATTATTCAAACCCAATCAATTTATAATTATCACAATGTTTGTCGTGATGACGTGGCAAAATGTAATTGATTGAAATTTATTGCTCAAATAATAAAAGTCGAAATCAATTTAGAGGTGAAAAATAATGTCCATTTGCTTAATTTTAAAACACAAAAAAATTGTTAGCAAAGAGTCTTAGTTTTAAGTTTTTATTTTGGTTTTAATTTGTTGGAAGAATCAGACTCACAAGGACTAAATGTGTAGTGTTTGAAGCTTAGAAACCAAATAAAAATGTGTAGCGTTTGAAACTTAGGAACCAAATAAAAATTAAACTACAATTTGATGGACTAATAAGATATTTTTTTCTAATGTTTTTATCCTCTCAATTTGTGTTTACAAATTGTTAAGATTAAGTAGTCGAATTATATTTTTATTACATGGAAAAATACATTTGGTACCTAAATTTTAAGATTCACACTTTTGCTTAATGAAATACTCACTTTTATCGTGAGTGTTAATACTACTAATTGATTTAAATTAATTATTGAGTGAAAATTTAGAATTCATTTTAATACTAACCAACAACGAAAAATAAAACTTAAGACGAAAGTGTAAAATTGCAACACCAATACAGTGAAATTAAACTTAAAACTTAAGACGGATAGTGTAACACTTTAAAACCTATTAACAAAGATGAAAACGAGATGTATAACTTGAATACCAACTACATACTTCGGTGTAATAAAAAGATAATGAAATTATTAAATGTTAAACACAAATTAGGGAATAAAAGAACGTGAAATTCAAAGATTTTGAATGAAATTAATATATGAAATAGATCCAACCACCAAATGTTTACAAACTACAACGACTATATGTGAGATATACCCCTTCTTGTGTATTGTGGAATGAAACGAATCCTCTGATCATTAGTTTAGACATTTTTCAGTAAAATATATGAAGGCTATAATTCAAAAGTGACCTATTCTTTTAGAAGTGATATTTTTGTACATCTTAATATATATATATTTTAATGAATTTACAAGCTTGGAAGATTGAGCGTATCCATTTTATTTGAAAATATCCTTAAACTTAAAAAGAAAAAAGTTATCGTTGGTATATGGATAAAAATTGTTGATTCCTTCTTTATAAAATATTTATAAACTTTGAAGAGTTGGATTCATACTCTTAGATAGGGGTAAGCATGATTGACAAAAGAAATGGACCGATCGGTCGAGGTCGTTTTGTAAAGTTTCAAATCGATAATTTCTAAAAAGTTTTCAAGTGTTATCGACCCTTAACCATCAATGTCGATTTGAATATTTACTAAACCGACTATGGTCGGTTCGATGACAGTCTTGTTTTAAAAAAACCGACTACGACCAATGATCACCCCTACTTTTAGAAATAAAAGAATTTTCATTAGAAATGTAGAATAACCAAATACAAATACAAATACATTCGACAAAGGAATATCACCTCCTATCTCTACCAATTTAGTAATGCAACATATTTTTCCTTCCACTAGTTGTCCTAAGTGTTTTAATTCAAAACAACTTTTGACTTATTATCGCACACTTAACTATTAATTATTAATGCACAACTTTATTAAAGCACACTTAACTATTAACGTACTAACTTTACTAAAACACTCAAATCTTTGTAGAAAAACAAGAATACTTTTTCATTCACTAATAATTTTCATGTGTATGAAATACATTTTGATATTAAGAAAGAAAACGCAAGGATGATGAGCTTAGAATCCATTTTCAACAATTTATTTCAAATTCATACACTAATATTCTTAGAAATTCTGAAATGTATTTTTCATTCTAAAAAAAAGAAAAGAAAAGAAAGCATTGAAGTGTAATCCATTTTCAATTTCAAGTGTATAATTTAAATTTAATTAATTTGAGATCAAAATAAAGAGTTTGAGAATTTGTCAAAATGATTTTTTTGTATATTTTAATTGGTTTTTATAGAGAAATCAATAATACAAATGTATGTATTTTTTTTCTTGTAAAAGGGTAATCAATTCCTATTCAAAACTAACTCCAAGTTGAAACGAAGATTAATGGAAATCAGGGAGCCGAGTGTTAGAAAATTTTGTATCACAAATCGAATCCACAAAACGTTGTTCAATCCACGTATTTTGATTACATTATACAGATTTAGATGTTAACGACGATGCTGGATATGAAGCAGAAGAGGAATTTTACAAAATCTACTCGAAGGTGGGAAGGGAAAAAGAGATAATTATTATTCATACAACAGAAGAAGGTGAGAGCCCTAGGCCGTCGGAGCACTCGCAAGTCCGACATCGTATCGTCAATCGGAAGGCTTCTTCGACGATGGAAACAAATGCCTCCACAAGTAGCGGCCGCTGGCCATATCCACCAACGTCCAGAACCCCGAAGACACCTGTTCAAACAAACCACCACAATAATTCCATTCAGACACAAACAAAGAAAAAGAAAATGCAAGATTCCGGTGAAGAACAATTAGAAGAACCTTGGAGCAGGAGGACGAATCGGAGGAATCGAATTCGTTGGAGTTATCGTCTGAATTATCGCCGGCCACGAAATCTTGAGGCTGAGATTTGA

mRNA sequence

ATGGGGAATTCAGCTTCTTGTGCTCCTTCAATGGCCTCCAATGGCGCCCCAAAGGTTTTATCCTTAGATGGAAGATTACAGAGCTTCTCAAAGCCAGTGACGGCCGCCGAACTAATGATCGAGCATTCCGGTAAATTCCTATGCGATTCCAGCGATCTTAAAGTCGGCCATCGGATTCAAGGTCTATTACCGGATGAAGATCTGGAATGGCGGCGATTATACTTTCTTCTTCCGATGGATCTTCTTTACTCTGTTCTAACACTGGAAGAAATGAGTTCTCTGACTTTCATCGCTACAAAGGCTTTGAAACAGGGAAATTCGAGCGGATTTGGGAGGATTTTTCCTGTTTTAATCAGTGAGTTTTGTAATTCTCCGGCGGATGTGAAGGGATTGAAATTGGAAGATGATGATGATCGAGAGAATCAAAATTTAGATGTTAACGACGATGCTGGATATGAAGCAGAAGAGGAATTTTACAAAATCTACTCGAAGGTGGGAAGGGAAAAAGAGATAATTATTATTCATACAACAGAAGAAGGTGAGAGCCCTAGGCCGTCGGAGCACTCGCAAGTCCGACATCGTATCGTCAATCGGAAGGCTTCTTCGACGATGGAAACAAATGCCTCCACAAGTAGCGGCCGCTGGCCATATCCACCAACGTCCAGAACCCCGAAGACACCTGTTCAAACAAACCACCACAATAATTCCATTCAGACACAAACAAAGAAAAAGAAAATGCAAGATTCCGGTGAAGAACAATTAGAAGAACCTTGGAGCAGGAGGACGAATCGGAGGAATCGAATTCGTTGGAGTTATCGTCTGAATTATCGCCGGCCACGAAATCTTGAGGCTGAGATTTGA

Coding sequence (CDS)

ATGGGGAATTCAGCTTCTTGTGCTCCTTCAATGGCCTCCAATGGCGCCCCAAAGGTTTTATCCTTAGATGGAAGATTACAGAGCTTCTCAAAGCCAGTGACGGCCGCCGAACTAATGATCGAGCATTCCGGTAAATTCCTATGCGATTCCAGCGATCTTAAAGTCGGCCATCGGATTCAAGGTCTATTACCGGATGAAGATCTGGAATGGCGGCGATTATACTTTCTTCTTCCGATGGATCTTCTTTACTCTGTTCTAACACTGGAAGAAATGAGTTCTCTGACTTTCATCGCTACAAAGGCTTTGAAACAGGGAAATTCGAGCGGATTTGGGAGGATTTTTCCTGTTTTAATCAGTGAGTTTTGTAATTCTCCGGCGGATGTGAAGGGATTGAAATTGGAAGATGATGATGATCGAGAGAATCAAAATTTAGATGTTAACGACGATGCTGGATATGAAGCAGAAGAGGAATTTTACAAAATCTACTCGAAGGTGGGAAGGGAAAAAGAGATAATTATTATTCATACAACAGAAGAAGGTGAGAGCCCTAGGCCGTCGGAGCACTCGCAAGTCCGACATCGTATCGTCAATCGGAAGGCTTCTTCGACGATGGAAACAAATGCCTCCACAAGTAGCGGCCGCTGGCCATATCCACCAACGTCCAGAACCCCGAAGACACCTGTTCAAACAAACCACCACAATAATTCCATTCAGACACAAACAAAGAAAAAGAAAATGCAAGATTCCGGTGAAGAACAATTAGAAGAACCTTGGAGCAGGAGGACGAATCGGAGGAATCGAATTCGTTGGAGTTATCGTCTGAATTATCGCCGGCCACGAAATCTTGAGGCTGAGATTTGA

Protein sequence

MGNSASCAPSMASNGAPKVLSLDGRLQSFSKPVTAAELMIEHSGKFLCDSSDLKVGHRIQGLLPDEDLEWRRLYFLLPMDLLYSVLTLEEMSSLTFIATKALKQGNSSGFGRIFPVLISEFCNSPADVKGLKLEDDDDRENQNLDVNDDAGYEAEEEFYKIYSKVGREKEIIIIHTTEEGESPRPSEHSQVRHRIVNRKASSTMETNASTSSGRWPYPPTSRTPKTPVQTNHHNNSIQTQTKKKKMQDSGEEQLEEPWSRRTNRRNRIRWSYRLNYRRPRNLEAEI

Homology

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BLAST of CsaV3_1G004460 vs. NCBI nr
Match: XP_004137354.1 (PREDICTED: uncharacterized protein LOC101203132 [Cucumis sativus] >KGN63887.1 hypothetical protein Csa_1G025190 [Cucumis sativus])

HSP 1 Score: 281.2 bits (718), Expect = 4.0e-72
Identity = 142/143 (99.30%), Postives = 143/143 (100.00%), Query Frame = 0


Query: 1   MGNSASCAPSMASNGAPKVLSLDGRLQSFSKPVTAAELMIEHSGKFLCDSSDLKVGHRIQ 60
           MGNSASCAPSMASNGAPKVLSLDGRLQSFSKPVTAAELMIEHSGKFLCDSSDLKVGHRIQ
Sbjct: 1   MGNSASCAPSMASNGAPKVLSLDGRLQSFSKPVTAAELMIEHSGKFLCDSSDLKVGHRIQ 60

Query: 61  GLLPDEDLEWRRLYFLLPMDLLYSVLTLEEMSSLTFIATKALKQGNSSGFGRIFPVLISE 120
           GLLPDEDLEWRRLYFLLPMDLLYSVLTLEEMSSLTFIATKALKQGNSSGFGRIFPVLISE
Sbjct: 61  GLLPDEDLEWRRLYFLLPMDLLYSVLTLEEMSSLTFIATKALKQGNSSGFGRIFPVLISE 120

Query: 121 FCNSPADVKGLKLEDDDDRENQN 144
           FCNSPADVKGLKLEDDDDRENQ+
Sbjct: 121 FCNSPADVKGLKLEDDDDRENQS 143

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BLAST of CsaV3_1G004460 vs. NCBI nr
Match: XP_008453692.1 (PREDICTED: uncharacterized protein LOC103494340 [Cucumis melo])

HSP 1 Score: 263.5 bits (672), Expect = 8.6e-67
Identity = 136/143 (95.10%), Postives = 139/143 (97.20%), Query Frame = 0


Query: 1   MGNSASCAPSMASNGAPKVLSLDGRLQSFSKPVTAAELMIEHSGKFLCDSSDLKVGHRIQ 60
           MGNSASCAPS+ASNGA KVLSLDG LQSF+KPVTAAELMIEHSGKFLCDSSDLKVGHRIQ
Sbjct: 1   MGNSASCAPSIASNGAAKVLSLDGTLQSFTKPVTAAELMIEHSGKFLCDSSDLKVGHRIQ 60

Query: 61  GLLPDEDLEWRRLYFLLPMDLLYSVLTLEEMSSLTFIATKALKQGNSSGFGRIFPVLISE 120
           GLLPDEDLEWRRLYFLLPMDLLYSVLTLEEMSSLTFIATKALKQGNSSGFGRIFPVLISE
Sbjct: 61  GLLPDEDLEWRRLYFLLPMDLLYSVLTLEEMSSLTFIATKALKQGNSSGFGRIFPVLISE 120

Query: 121 FCNSPADVKGLKLEDDDDRENQN 144
           FCNSPADVKGLKLEDDD  ENQ+
Sbjct: 121 FCNSPADVKGLKLEDDDG-ENQS 142

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BLAST of CsaV3_1G004460 vs. NCBI nr
Match: XP_022135244.1 (uncharacterized protein LOC111007254 [Momordica charantia])

HSP 1 Score: 228.0 bits (580), Expect = 4.0e-56
Identity = 119/143 (83.22%), Postives = 128/143 (89.51%), Query Frame = 0


Query: 1   MGNSASCAPSMASNGAPKVLSLDGRLQSFSKPVTAAELMIEHSGKFLCDSSDLKVGHRIQ 60
           MGNSASCAPSM SNGA KVLSLDG+L+S++KPV AAELMIE+SGKFLCDS DLKVGHRIQ
Sbjct: 24  MGNSASCAPSMVSNGAAKVLSLDGKLESYTKPVKAAELMIENSGKFLCDSGDLKVGHRIQ 83

Query: 61  GLLPDEDLEWRRLYFLLPMDLLYSVLTLEEMSSLTFIATKALKQGNSSGFGRIFPVLISE 120
           GLLPDEDLE RRLYFLLPMDLLYSVLTLEEMSSLT+IATKALKQGNSSGFGRIFPVLISE
Sbjct: 84  GLLPDEDLECRRLYFLLPMDLLYSVLTLEEMSSLTYIATKALKQGNSSGFGRIFPVLISE 143

Query: 121 FCNSPADVKGLKLEDDDDRENQN 144
            C  P++V  LK E   DRE +N
Sbjct: 144 LCILPSEVNRLKSE-HSDRETEN 165

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BLAST of CsaV3_1G004460 vs. NCBI nr
Match: XP_022921761.1 (uncharacterized protein LOC111429917 [Cucurbita moschata])

HSP 1 Score: 221.9 bits (564), Expect = 2.9e-54
Identity = 116/143 (81.12%), Postives = 126/143 (88.11%), Query Frame = 0


Query: 1   MGNSASCAPSMASNGAPKVLSLDGRLQSFSKPVTAAELMIEHSGKFLCDSSDLKVGHRIQ 60
           MGNSASCAPSMASNGA KVLSLDG+LQS+ KPV AAELMIEHSGKFLCDS+DL VGHRIQ
Sbjct: 1   MGNSASCAPSMASNGAAKVLSLDGKLQSYRKPVQAAELMIEHSGKFLCDSADLSVGHRIQ 60

Query: 61  GLLPDEDLEWRRLYFLLPMDLLYSVLTLEEMSSLTFIATKALKQGNSSGFGRIFPVLISE 120
           GLLPDEDLE RRLYFLLPMDLLYSVLT+EEM SLT+ ATKALK GNSSGFGRIFPVLI++
Sbjct: 61  GLLPDEDLECRRLYFLLPMDLLYSVLTIEEMRSLTYTATKALKHGNSSGFGRIFPVLITD 120

Query: 121 FCNSPADVKGLKLEDDDDRENQN 144
            C S +DV  LK   D DREN++
Sbjct: 121 LCISLSDVNRLK-SADGDRENRS 142

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BLAST of CsaV3_1G004460 vs. NCBI nr
Match: XP_022965466.1 (uncharacterized protein LOC111465363 [Cucurbita maxima])

HSP 1 Score: 221.5 bits (563), Expect = 3.8e-54
Identity = 115/143 (80.42%), Postives = 123/143 (86.01%), Query Frame = 0


Query: 1   MGNSASCAPSMASNGAPKVLSLDGRLQSFSKPVTAAELMIEHSGKFLCDSSDLKVGHRIQ 60
           MGNSA CAPSMA NGA KVL+LDG LQSF+KPV AAELMIEHSGKFLCDS DLKVGHRI 
Sbjct: 1   MGNSAFCAPSMAFNGAAKVLTLDGNLQSFTKPVKAAELMIEHSGKFLCDSGDLKVGHRIP 60

Query: 61  GLLPDEDLEWRRLYFLLPMDLLYSVLTLEEMSSLTFIATKALKQGNSSGFGRIFPVLISE 120
           GLL +E LE RRLYFLLPMDLLYSVLT+EEMSSLT+IATKALK+GNSSGFGRIFPVLISE
Sbjct: 61  GLLTEEYLECRRLYFLLPMDLLYSVLTIEEMSSLTYIATKALKRGNSSGFGRIFPVLISE 120

Query: 121 FCNSPADVKGLKLEDDDDRENQN 144
            C  P+DV GLK  D D   NQ+
Sbjct: 121 LCIFPSDVNGLKSADGDGENNQS 143

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BLAST of CsaV3_1G004460 vs. TAIR10
Match: AT1G18290.1 (unknown protein)

HSP 1 Score: 93.2 bits (230), Expect = 2.8e-19
Identity = 60/162 (37.04%), Postives = 90/162 (55.56%), Query Frame = 0


Query: 1   MGNSASCAP----SMASNGAPKVLS-LDGRLQSFSKPVTAAELMIEHSGKFLCDSSDLKV 60
           MGN++SCAP    + +S+G  K+L+   G L+ FSKP+  ++++  HSG F+ DS+ L++
Sbjct: 1   MGNTSSCAPLIISTNSSSGVVKILAPFTGTLEVFSKPIKTSDIVSRHSGHFITDSTLLQI 60

Query: 61  GHRIQGLLPDEDLEWRR-LYFLLPMDLLYSVLTLEEMSSLTFIATKALKQGNSSGFGRIF 120
            HR+  + PDE L  RR LY LLP D+L+SVLT EE+S ++  A + L +   +   RIF
Sbjct: 61  SHRVTAVSPDEYLRPRRHLYLLLPTDMLFSVLTQEELSLISNKAAETLNKSRYNHLKRIF 120

Query: 121 PVLISEFCNSPADVKGLKLEDDDDRENQNLDVNDDAGYEAEE 157
           PV I                   DR      VN+D  ++  E
Sbjct: 121 PVCIFPMTG--------------DRRRNPSSVNEDRAHDGVE 148

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BLAST of CsaV3_1G004460 vs. TAIR10
Match: AT5G66580.1 (unknown protein)

HSP 1 Score: 58.9 bits (141), Expect = 5.8e-09
Identity = 37/110 (33.64%), Postives = 62/110 (56.36%), Query Frame = 0


Query: 1   MGNSASCAPSMASNGAPKVLSLDGRLQSFSKPVTAAELMIEHSGKFLCDSSDLKVGHRIQ 60
           MG  AS   S+ S+ A K++ LDG LQ FS PV   +++ ++   F+C+S ++     + 
Sbjct: 1   MGACAS-RESLRSDSA-KLILLDGTLQEFSSPVKVWQILQKNPTSFVCNSDEMDFDDAVS 60

Query: 61  GLLPDEDLEWRRLYFLLPMDLLYSVLTLEEMSSLTFIATKALKQGNSSGF 111
            +  +E+L   +LYF+LP+  L   L  EEM++L   A+ AL +    G+
Sbjct: 61  AVAGNEELRSGQLYFVLPLTWLNHPLRAEEMAALAVKASSALTKSGGVGW 108

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BLAST of CsaV3_1G004460 vs. TAIR10
Match: AT3G50800.1 (unknown protein)

HSP 1 Score: 55.8 bits (133), Expect = 4.9e-08
Identity = 30/92 (32.61%), Postives = 49/92 (53.26%), Query Frame = 0


Query: 18  KVLSLDGRLQSFSKPVTAAELMIEHSGKFLCDSSDLKVGHRIQGLLPDEDLEWRRLYFLL 77
           K++  DG LQ FS PV   +++ ++   F+C+S D+     +  +   EDL    LYF+L
Sbjct: 16  KLILPDGTLQEFSTPVKVWQILQKNPTSFVCNSDDMDFDDAVLAVPGSEDLRPGELYFVL 75

Query: 78  PMDLLYSVLTLEEMSSLTFIATKALKQGNSSG 110
           P+  L   L  +EM++L   A+ AL +    G
Sbjct: 76  PLTWLNHPLRADEMAALAVKASSALAKSGGGG 107

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BLAST of CsaV3_1G004460 vs. TAIR10
Match: AT4G37240.1 (unknown protein)

HSP 1 Score: 52.4 bits (124), Expect = 5.5e-07
Identity = 28/94 (29.79%), Postives = 53/94 (56.38%), Query Frame = 0


Query: 7   CAPSMASNGA-PKVLSLDGRLQSFSKPVTAAELMIEHSGKFLCDSSDLKVGHRIQGLLPD 66
           C+ S ++  A  K++  DGR+  F+ PV    +++++   F+C+S D+     +  +  D
Sbjct: 4   CSSSESTQVATAKLILQDGRMMEFANPVKVGYVLLKYPMCFICNSDDMDFDDAVAAISAD 63

Query: 67  EDLEWRRLYFLLPMDLLYSVLTLEEMSSLTFIAT 100
           E+L+  ++YF LP+  L   L  EEM++L   A+
Sbjct: 64  EELQLGQIYFALPLCWLRQPLKAEEMAALAVKAS 97

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BLAST of CsaV3_1G004460 vs. TAIR10
Match: AT3G03280.1 (unknown protein)

HSP 1 Score: 52.0 bits (123), Expect = 7.1e-07
Identity = 39/118 (33.05%), Postives = 55/118 (46.61%), Query Frame = 0


Query: 1   MGNSASCAPSMASNG-APKVLSLDGRLQSFSKPVTAAELMIEHSGKFLCDSSDLKVGHRI 60
           MGN  SCA +  S+    KV+  DG ++    P  AAELM+E    FL D+  +KVG + 
Sbjct: 1   MGNYVSCALNKTSSSPLAKVILPDGGVRDIHVPTKAAELMMEMPSYFLVDTKSVKVGRKF 60

Query: 61  QGLLPDEDLEWR--RLYFLLPMDLLYSVLTLEEMSSLTFIATKALKQGNSSGFGRIFP 116
             L  D+DL+     +Y   PM    S     +M+ L     K  K   + G  R+ P
Sbjct: 61  IPLAADDDLDLGGCHVYVAFPMTRATSAANASDMARLYLTGKKRTK---NCGHRRVSP 115

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BLAST of CsaV3_1G004460 vs. TrEMBL
Match: tr|A0A0A0LSX3|A0A0A0LSX3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025190 PE=4 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 2.6e-72
Identity = 142/143 (99.30%), Postives = 143/143 (100.00%), Query Frame = 0


Query: 1   MGNSASCAPSMASNGAPKVLSLDGRLQSFSKPVTAAELMIEHSGKFLCDSSDLKVGHRIQ 60
           MGNSASCAPSMASNGAPKVLSLDGRLQSFSKPVTAAELMIEHSGKFLCDSSDLKVGHRIQ
Sbjct: 1   MGNSASCAPSMASNGAPKVLSLDGRLQSFSKPVTAAELMIEHSGKFLCDSSDLKVGHRIQ 60

Query: 61  GLLPDEDLEWRRLYFLLPMDLLYSVLTLEEMSSLTFIATKALKQGNSSGFGRIFPVLISE 120
           GLLPDEDLEWRRLYFLLPMDLLYSVLTLEEMSSLTFIATKALKQGNSSGFGRIFPVLISE
Sbjct: 61  GLLPDEDLEWRRLYFLLPMDLLYSVLTLEEMSSLTFIATKALKQGNSSGFGRIFPVLISE 120

Query: 121 FCNSPADVKGLKLEDDDDRENQN 144
           FCNSPADVKGLKLEDDDDRENQ+
Sbjct: 121 FCNSPADVKGLKLEDDDDRENQS 143

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BLAST of CsaV3_1G004460 vs. TrEMBL
Match: tr|A0A1S3BY23|A0A1S3BY23_CUCME (uncharacterized protein LOC103494340 OS=Cucumis melo OX=3656 GN=LOC103494340 PE=4 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 5.7e-67
Identity = 136/143 (95.10%), Postives = 139/143 (97.20%), Query Frame = 0


Query: 1   MGNSASCAPSMASNGAPKVLSLDGRLQSFSKPVTAAELMIEHSGKFLCDSSDLKVGHRIQ 60
           MGNSASCAPS+ASNGA KVLSLDG LQSF+KPVTAAELMIEHSGKFLCDSSDLKVGHRIQ
Sbjct: 1   MGNSASCAPSIASNGAAKVLSLDGTLQSFTKPVTAAELMIEHSGKFLCDSSDLKVGHRIQ 60

Query: 61  GLLPDEDLEWRRLYFLLPMDLLYSVLTLEEMSSLTFIATKALKQGNSSGFGRIFPVLISE 120
           GLLPDEDLEWRRLYFLLPMDLLYSVLTLEEMSSLTFIATKALKQGNSSGFGRIFPVLISE
Sbjct: 61  GLLPDEDLEWRRLYFLLPMDLLYSVLTLEEMSSLTFIATKALKQGNSSGFGRIFPVLISE 120

Query: 121 FCNSPADVKGLKLEDDDDRENQN 144
           FCNSPADVKGLKLEDDD  ENQ+
Sbjct: 121 FCNSPADVKGLKLEDDDG-ENQS 142

[Close]

BLAST of CsaV3_1G004460 vs. TrEMBL
Match: tr|A0A151TK72|A0A151TK72_CAJCA (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_023781 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 2.1e-37
Identity = 83/132 (62.88%), Postives = 106/132 (80.30%), Query Frame = 0


Query: 1   MGNSASCAPSMASNGAPKVLSLDGRLQSFSKPVTAAELMIEHSGKFLCDSSDLKVGHRIQ 60
           MGN+ASC PS+  NG  KVL LDGRL++++KP+ AAELM+E+ G+F+CDSS LK GHRIQ
Sbjct: 1   MGNAASCTPSLTPNGVFKVLFLDGRLEAYTKPMRAAELMLEYPGQFVCDSSYLKEGHRIQ 60

Query: 61  GLLPDEDLEWRRLYFLLPMDLLYSVLTLEEMSSLTFIATKALKQGNSSGFGRIFPVLISE 120
           GLL DE+LE R+ YFLLPM+LLYSVLT EEMSSL + AT+A K G+ +  G+IFPV  SE
Sbjct: 61  GLLADEELERRKFYFLLPMELLYSVLTHEEMSSLNYKATRATKHGSFNNLGKIFPV-FSE 120

Query: 121 FCNSPADVKGLK 133
           FC  P+++K L+
Sbjct: 121 FCMFPSELKRLE 131

[Close]

BLAST of CsaV3_1G004460 vs. TrEMBL
Match: tr|A0A1S3VAF3|A0A1S3VAF3_VIGRR (uncharacterized protein LOC106773150 OS=Vigna radiata var. radiata OX=3916 GN=LOC106773150 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 6.1e-37
Identity = 84/145 (57.93%), Postives = 113/145 (77.93%), Query Frame = 0


Query: 1   MGNSASCAPSMASNGAPKVLSLDGRLQSFSKPVTAAELMIEHSGKFLCDSSDLKVGHRIQ 60
           MGN+ASC PS+ +NG  KVL LDGRL+S++KP+ AAELM+E+ G+F+CDS+ LKVGHRIQ
Sbjct: 1   MGNAASCTPSLTANGVFKVLFLDGRLESYTKPIRAAELMLEYPGQFVCDSTYLKVGHRIQ 60

Query: 61  GLLPDEDLEWRRLYFLLPMDLLYSVLTLEEMSSLTFIATKALKQGNSSGFGRIFPVLISE 120
           GLL DE+LE R+ YFLLPM+LLYSVLT EEMSSL + A++A K  + +  G+IFPV  SE
Sbjct: 61  GLLADEELERRKFYFLLPMELLYSVLTHEEMSSLNYKASRATKHASFNNLGKIFPV-FSE 120

Query: 121 FCNSPADVKGLKLEDDDDRENQNLD 146
           FC  P+++K L+  +   RE + ++
Sbjct: 121 FCMFPSELKRLEAANQVIREPEPVE 144

[Close]

BLAST of CsaV3_1G004460 vs. TrEMBL
Match: tr|A0A0L9ULE0|A0A0L9ULE0_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan05g097800 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 6.1e-37
Identity = 84/145 (57.93%), Postives = 113/145 (77.93%), Query Frame = 0


Query: 1   MGNSASCAPSMASNGAPKVLSLDGRLQSFSKPVTAAELMIEHSGKFLCDSSDLKVGHRIQ 60
           MGN+ASC PS+ +NG  KVL LDGRL+S++KP+ AAELM+E+ G+F+CDS+ LKVGHRIQ
Sbjct: 1   MGNAASCTPSLTANGVFKVLFLDGRLESYTKPIRAAELMLEYPGQFVCDSTYLKVGHRIQ 60

Query: 61  GLLPDEDLEWRRLYFLLPMDLLYSVLTLEEMSSLTFIATKALKQGNSSGFGRIFPVLISE 120
           GLL DE+LE R+ YFLLPM+LLYSVLT EEMSSL + A++A K  + +  G+IFPV  SE
Sbjct: 61  GLLADEELERRKFYFLLPMELLYSVLTHEEMSSLNYKASRATKHASFNNLGKIFPV-FSE 120

Query: 121 FCNSPADVKGLKLEDDDDRENQNLD 146
           FC  P+++K L+  +   RE + ++
Sbjct: 121 FCMFPSELKRLEAANQVVREAEPVE 144

The following BLAST results are available for this feature:

BLAST of CsaV3_1G004460 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004137354.1	4.0e-72	99.30	PREDICTED: uncharacterized protein LOC101203132 [Cucumis sativus] >KGN63887.1 hy...	[more]
XP_008453692.1	8.6e-67	95.10	PREDICTED: uncharacterized protein LOC103494340 [Cucumis melo]	[more]
XP_022135244.1	4.0e-56	83.22	uncharacterized protein LOC111007254 [Momordica charantia]	[more]
XP_022921761.1	2.9e-54	81.12	uncharacterized protein LOC111429917 [Cucurbita moschata]	[more]
XP_022965466.1	3.8e-54	80.42	uncharacterized protein LOC111465363 [Cucurbita maxima]	[more]

BLAST of CsaV3_1G004460 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G18290.1	2.8e-19	37.04	unknown protein	[more]
AT5G66580.1	5.8e-09	33.64	unknown protein	[more]
AT3G50800.1	4.9e-08	32.61	unknown protein	[more]
AT4G37240.1	5.5e-07	29.79	unknown protein	[more]
AT3G03280.1	7.1e-07	33.05	unknown protein	[more]

BLAST of CsaV3_1G004460 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsaV3_1G004460 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LSX3\|A0A0A0LSX3_CUCSA	2.6e-72	99.30	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025190 PE=4 SV=1	[more]
tr\|A0A1S3BY23\|A0A1S3BY23_CUCME	5.7e-67	95.10	uncharacterized protein LOC103494340 OS=Cucumis melo OX=3656 GN=LOC103494340 PE=...	[more]
tr\|A0A151TK72\|A0A151TK72_CAJCA	2.1e-37	62.88	Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_023781 PE=4 SV=1	[more]
tr\|A0A1S3VAF3\|A0A1S3VAF3_VIGRR	6.1e-37	57.93	uncharacterized protein LOC106773150 OS=Vigna radiata var. radiata OX=3916 GN=LO...	[more]
tr\|A0A0L9ULE0\|A0A0L9ULE0_PHAAN	6.1e-37	57.93	Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan05g097800 PE...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR025322	DUF4228_plant

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G004460.1	CsaV3_1G004460.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 1..106 e-value: 3.7E-24 score: 86.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 244..261
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 198..261
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 198..243
None	No IPR available	PANTHER	PTHR33052	FAMILY NOT NAMED	coord: 1..136
None	No IPR available	PANTHER	PTHR33052:SF22	F15H18.19	coord: 1..136

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_1G004460	CSPI01G04470	Wild cucumber (PI 183967)	cpicucB001
CsaV3_1G004460	Cucsa.111680	Cucumber (Gy14) v1	cgycucB143
CsaV3_1G004460	CmaCh11G003190	Cucurbita maxima (Rimu)	cmacucB0101
CsaV3_1G004460	CmoCh10G003620	Cucurbita moschata (Rifu)	cmocucB0046
CsaV3_1G004460	CmoCh11G003240	Cucurbita moschata (Rifu)	cmocucB0091
CsaV3_1G004460	Cp4.1LG18g06620	Cucurbita pepo (Zucchini)	cpecucB0444
CsaV3_1G004460	Cp4.1LG04g13600	Cucurbita pepo (Zucchini)	cpecucB0815
CsaV3_1G004460	CsGy1G004370	Cucumber (Gy14) v2	cgybcucB002
CsaV3_1G004460	Carg09095	Silver-seed gourd	carcucB0629
CsaV3_1G004460	Carg15184	Silver-seed gourd	carcucB0824
CsaV3_1G004460	Cla018912	Watermelon (97103) v1	cucwmB106
CsaV3_1G004460	MELO3C017371	Melon (DHL92) v3.5.1	cucmeB055
CsaV3_1G004460	ClCG06G014210	Watermelon (Charleston Gray)	cucwcgB089
CsaV3_1G004460	Lsi06G012690	Bottle gourd (USVL1VR-Ls)	cuclsiB082
CsaV3_1G004460	MELO3C017371.2	Melon (DHL92) v3.6.1	cucmedB051
CsaV3_1G004460	Cla97C06G123670	Watermelon (97103) v2	cucwmbB077
CsaV3_1G004460	Bhi02G000113	Wax gourd	cucwgoB085

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_1G004460	Cucurbita maxima (Rimu)	cmacucB0060