CmoCh11G003240 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGAACTCAGCGTTCTGTGCGCCTTCGATGGCATCCAATGGCGCCGCGAAGGTCTTGACCTTAGACGGAAACTTGCAGAGCTTCATGAAGCCAGTGAAGGCCGCTGAATTAATGATCGAGCATTCCGGAAAATTCCTCTGCGATTCCGGCGATCTCAAGGTCGGCCATCGGATTCCAGGCCTTTTGACGGAGGAGTATCTTGAGGGCGGCCGATTGTACTTTCTACTTCCGATGGATCTTCTTTACTCTGTGTTGACGATCGAGGAAATGAGTTCTCTCACCTACATCGCTACGAAGGCTATGAAACGTGGAAATTCGAGTGGATTTGGAAGGATCTTCCCTGTTTTGATCAGTGAACTCTGTATTTTTCCGTCGGATGTCAATGGATTGAAATCGGCGGACGGCGATGGAGAGAATAATCAAAGTTCAAAGCCGGTGCAGAGATTGATGTCGAAACAGAGATCGTGGAAGCCGGCGCTCGAAACCATTGCTGAAACTTCGTGCACATAG ATGGGGAACTCAGCGTTCTGTGCGCCTTCGATGGCATCCAATGGCGCCGCGAAGGTCTTGACCTTAGACGGAAACTTGCAGAGCTTCATGAAGCCAGTGAAGGCCGCTGAATTAATGATCGAGCATTCCGGAAAATTCCTCTGCGATTCCGGCGATCTCAAGGTCGGCCATCGGATTCCAGGCCTTTTGACGGAGGAGTATCTTGAGGGCGGCCGATTGTACTTTCTACTTCCGATGGATCTTCTTTACTCTGTGTTGACGATCGAGGAAATGAGTTCTCTCACCTACATCGCTACGAAGGCTATGAAACGTGGAAATTCGAGTGGATTTGGAAGGATCTTCCCTGTTTTGATCAGTGAACTCTGTATTTTTCCGTCGGATGTCAATGGATTGAAATCGGCGGACGGCGATGGAGAGAATAATCAAAGTTCAAAGCCGGTGCAGAGATTGATGTCGAAACAGAGATCGTGGAAGCCGGCGCTCGAAACCATTGCTGAAACTTCGTGCACATAG ATGGGGAACTCAGCGTTCTGTGCGCCTTCGATGGCATCCAATGGCGCCGCGAAGGTCTTGACCTTAGACGGAAACTTGCAGAGCTTCATGAAGCCAGTGAAGGCCGCTGAATTAATGATCGAGCATTCCGGAAAATTCCTCTGCGATTCCGGCGATCTCAAGGTCGGCCATCGGATTCCAGGCCTTTTGACGGAGGAGTATCTTGAGGGCGGCCGATTGTACTTTCTACTTCCGATGGATCTTCTTTACTCTGTGTTGACGATCGAGGAAATGAGTTCTCTCACCTACATCGCTACGAAGGCTATGAAACGTGGAAATTCGAGTGGATTTGGAAGGATCTTCCCTGTTTTGATCAGTGAACTCTGTATTTTTCCGTCGGATGTCAATGGATTGAAATCGGCGGACGGCGATGGAGAGAATAATCAAAGTTCAAAGCCGGTGCAGAGATTGATGTCGAAACAGAGATCGTGGAAGCCGGCGCTCGAAACCATTGCTGAAACTTCGTGCACATAG
BLAST of CmoCh11G003240 vs. TrEMBL
Match: A0A0A0LSX3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G025190 PE=4 SV=1) HSP 1 Score: 272.7 bits (696), Expect = 3.0e-70 Identity = 140/170 (82.35%), Postives = 148/170 (87.06%), Query Frame = 1
BLAST of CmoCh11G003240 vs. TrEMBL
Match: A9PEN7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0015s04770g PE=2 SV=1) HSP 1 Score: 184.9 bits (468), Expect = 8.3e-44 Identity = 102/167 (61.08%), Postives = 123/167 (73.65%), Query Frame = 1
BLAST of CmoCh11G003240 vs. TrEMBL
Match: A0A0L9ULE0_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan05g097800 PE=4 SV=1) HSP 1 Score: 183.7 bits (465), Expect = 1.8e-43 Identity = 96/167 (57.49%), Postives = 127/167 (76.05%), Query Frame = 1
BLAST of CmoCh11G003240 vs. TrEMBL
Match: A0A0S3QWG4_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G003900 PE=4 SV=1) HSP 1 Score: 183.7 bits (465), Expect = 1.8e-43 Identity = 96/167 (57.49%), Postives = 127/167 (76.05%), Query Frame = 1
BLAST of CmoCh11G003240 vs. TrEMBL
Match: I1K5B3_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_05G246800 PE=4 SV=1) HSP 1 Score: 182.6 bits (462), Expect = 4.1e-43 Identity = 92/167 (55.09%), Postives = 122/167 (73.05%), Query Frame = 1
BLAST of CmoCh11G003240 vs. TAIR10
Match: AT1G18290.1 (AT1G18290.1 unknown protein) HSP 1 Score: 105.9 bits (263), Expect = 2.5e-23 Identity = 69/182 (37.91%), Postives = 102/182 (56.04%), Query Frame = 1
BLAST of CmoCh11G003240 vs. TAIR10
Match: AT5G66580.1 (AT5G66580.1 unknown protein) HSP 1 Score: 67.4 bits (163), Expect = 9.7e-12 Identity = 47/154 (30.52%), Postives = 75/154 (48.70%), Query Frame = 1
BLAST of CmoCh11G003240 vs. TAIR10
Match: AT4G37240.1 (AT4G37240.1 unknown protein) HSP 1 Score: 65.9 bits (159), Expect = 2.8e-11 Identity = 40/139 (28.78%), Postives = 70/139 (50.36%), Query Frame = 1
BLAST of CmoCh11G003240 vs. TAIR10
Match: AT3G50800.1 (AT3G50800.1 unknown protein) HSP 1 Score: 58.9 bits (141), Expect = 3.5e-09 Identity = 30/93 (32.26%), Postives = 50/93 (53.76%), Query Frame = 1
BLAST of CmoCh11G003240 vs. TAIR10
Match: AT1G76600.1 (AT1G76600.1 unknown protein) HSP 1 Score: 53.5 bits (127), Expect = 1.5e-07 Identity = 34/122 (27.87%), Postives = 65/122 (53.28%), Query Frame = 1
BLAST of CmoCh11G003240 vs. NCBI nr
Match: gi|659107474|ref|XP_008453692.1| (PREDICTED: uncharacterized protein LOC103494340 [Cucumis melo]) HSP 1 Score: 273.5 bits (698), Expect = 2.5e-70 Identity = 142/170 (83.53%), Postives = 151/170 (88.82%), Query Frame = 1
BLAST of CmoCh11G003240 vs. NCBI nr
Match: gi|449439158|ref|XP_004137354.1| (PREDICTED: uncharacterized protein LOC101203132 [Cucumis sativus]) HSP 1 Score: 272.7 bits (696), Expect = 4.3e-70 Identity = 140/170 (82.35%), Postives = 148/170 (87.06%), Query Frame = 1
BLAST of CmoCh11G003240 vs. NCBI nr
Match: gi|566205847|ref|XP_002322115.2| (hypothetical protein POPTR_0015s04770g [Populus trichocarpa]) HSP 1 Score: 184.9 bits (468), Expect = 1.2e-43 Identity = 102/167 (61.08%), Postives = 123/167 (73.65%), Query Frame = 1
BLAST of CmoCh11G003240 vs. NCBI nr
Match: gi|920700149|gb|KOM43374.1| (hypothetical protein LR48_Vigan05g097800 [Vigna angularis]) HSP 1 Score: 183.7 bits (465), Expect = 2.6e-43 Identity = 96/167 (57.49%), Postives = 127/167 (76.05%), Query Frame = 1
BLAST of CmoCh11G003240 vs. NCBI nr
Match: gi|950934828|ref|XP_014515333.1| (PREDICTED: uncharacterized protein LOC106773150 [Vigna radiata var. radiata]) HSP 1 Score: 183.0 bits (463), Expect = 4.5e-43 Identity = 96/167 (57.49%), Postives = 126/167 (75.45%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: None |