Cp4.1LG04g13600.1 (mRNA) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG04g13600.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	DUF4228 domain protein
Location	Cp4.1LG04 : 11102087 .. 11102599 (+)
Sequence length	513

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAACTCAGCGTTCTGTGCGCCTTCGATGGCCTCCAATGGCGCCGCGAAGGTCTTAACCTTGGACGGAAACTTGCAGAGCTTCACGAAGCCAGTGAAGGCCGCTGAATTAATGATCGAGCATTCCGGAAAATTCCTCTGCGATTCCGGCGATCTCAAGGTCGGCCACCGGATTCCAGGCCTTTTGACGGAGGAGTATCTTGAGGGCGGCCGATTGTACTTTCTACTTCCGATGGATCTTCTTTATTCTGTGTTGACGATCGAGGAAATGAGTTCTCTCACCTACATCGCTACGAAGGCTCTGAAACGTGGAAATTCAAGTGGATTTGGAAGGATCTTCCCTGTTTTGATCAGTGAACTCTGTATTTTTCCGTCGGATGTCAATGGATTGAAATCGGCGGATGGCGATGGAGAGAATAATCAAAGTTCAAAGCCGGTGCAGAGATTGATGTCGAAACAGAGATCGTGGAAGCCGGCGCTCGAAACCATTGCTGAAACTTCGTGCACATAG

mRNA sequence

ATGGGGAACTCAGCGTTCTGTGCGCCTTCGATGGCCTCCAATGGCGCCGCGAAGGTCTTAACCTTGGACGGAAACTTGCAGAGCTTCACGAAGCCAGTGAAGGCCGCTGAATTAATGATCGAGCATTCCGGAAAATTCCTCTGCGATTCCGGCGATCTCAAGGTCGGCCACCGGATTCCAGGCCTTTTGACGGAGGAGTATCTTGAGGGCGGCCGATTGTACTTTCTACTTCCGATGGATCTTCTTTATTCTGTGTTGACGATCGAGGAAATGAGTTCTCTCACCTACATCGCTACGAAGGCTCTGAAACGTGGAAATTCAAGTGGATTTGGAAGGATCTTCCCTGTTTTGATCAGTGAACTCTGTATTTTTCCGTCGGATGTCAATGGATTGAAATCGGCGGATGGCGATGGAGAGAATAATCAAAGTTCAAAGCCGGTGCAGAGATTGATGTCGAAACAGAGATCGTGGAAGCCGGCGCTCGAAACCATTGCTGAAACTTCGTGCACATAG

Coding sequence (CDS)

ATGGGGAACTCAGCGTTCTGTGCGCCTTCGATGGCCTCCAATGGCGCCGCGAAGGTCTTAACCTTGGACGGAAACTTGCAGAGCTTCACGAAGCCAGTGAAGGCCGCTGAATTAATGATCGAGCATTCCGGAAAATTCCTCTGCGATTCCGGCGATCTCAAGGTCGGCCACCGGATTCCAGGCCTTTTGACGGAGGAGTATCTTGAGGGCGGCCGATTGTACTTTCTACTTCCGATGGATCTTCTTTATTCTGTGTTGACGATCGAGGAAATGAGTTCTCTCACCTACATCGCTACGAAGGCTCTGAAACGTGGAAATTCAAGTGGATTTGGAAGGATCTTCCCTGTTTTGATCAGTGAACTCTGTATTTTTCCGTCGGATGTCAATGGATTGAAATCGGCGGATGGCGATGGAGAGAATAATCAAAGTTCAAAGCCGGTGCAGAGATTGATGTCGAAACAGAGATCGTGGAAGCCGGCGCTCGAAACCATTGCTGAAACTTCGTGCACATAG

Protein sequence

MGNSAFCAPSMASNGAAKVLTLDGNLQSFTKPVKAAELMIEHSGKFLCDSGDLKVGHRIPGLLTEEYLEGGRLYFLLPMDLLYSVLTIEEMSSLTYIATKALKRGNSSGFGRIFPVLISELCIFPSDVNGLKSADGDGENNQSSKPVQRLMSKQRSWKPALETIAETSCT

Homology

[Close]

BLAST of Cp4.1LG04g13600.1 vs. TrEMBL
Match: A0A0A0LSX3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G025190 PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 1.0e-70
Identity = 141/170 (82.94%), Postives = 149/170 (87.65%), Query Frame = 1


Query: 1   MGNSAFCAPSMASNGAAKVLTLDGNLQSFTKPVKAAELMIEHSGKFLCDSGDLKVGHRIP 60
           MGNSA CAPSMASNGA KVL+LDG LQSF+KPV AAELMIEHSGKFLCDS DLKVGHRI 
Sbjct: 1   MGNSASCAPSMASNGAPKVLSLDGRLQSFSKPVTAAELMIEHSGKFLCDSSDLKVGHRIQ 60

Query: 61  GLLTEEYLEGGRLYFLLPMDLLYSVLTIEEMSSLTYIATKALKRGNSSGFGRIFPVLISE 120
           GLL +E LE  RLYFLLPMDLLYSVLT+EEMSSLT+IATKALK+GNSSGFGRIFPVLISE
Sbjct: 61  GLLPDEDLEWRRLYFLLPMDLLYSVLTLEEMSSLTFIATKALKQGNSSGFGRIFPVLISE 120

Query: 121 LCIFPSDVNGLKSADGDGENNQSSKPVQRLMSKQRSWKPALETIAETSCT 171
            C  P+DV GLK  D D   NQSSK V+RLMSKQRSWKPALETIAETSCT
Sbjct: 121 FCNSPADVKGLKLEDDDDRENQSSKAVKRLMSKQRSWKPALETIAETSCT 170

[Close]

BLAST of Cp4.1LG04g13600.1 vs. TrEMBL
Match: A9PEN7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0015s04770g PE=2 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 9.8e-45
Identity = 104/167 (62.28%), Postives = 124/167 (74.25%), Query Frame = 1


Query: 1   MGNSAFCAPSMASNGAAKVLTLDGNLQSFTKPVKAAELMIEHSGKFLCDSGDLKVGHRIP 60
           MGN+  CAPS+ SNG  KVLT  GNLQ +TKPVKAAELM+E+ G+F+CDS  LKVGHR+ 
Sbjct: 1   MGNATSCAPSIISNGVVKVLTNGGNLQIYTKPVKAAELMLENPGQFVCDSTSLKVGHRVH 60

Query: 61  GLLTEEYLEGGRLYFLLPMDLLYSVLTIEEMSSLTYIATKALKRGNSSGFGRIFPVLISE 120
           GLL ++ LE  + YF+LPM+LLYSVLT EEMSSLTY ATKALK  N   FG+IFPVL SE
Sbjct: 61  GLLADDQLERRQFYFVLPMELLYSVLTHEEMSSLTYKATKALKYNN---FGKIFPVL-SE 120

Query: 121 LCIFPSDVNGLKSADGDGENNQSSKPVQRLMSKQRSWKPALETIAET 168
            CIFPS+   + S   +       +P++R  SKQRSWKPALETI ET
Sbjct: 121 FCIFPSEGKTMDSMATE------PQPMER-YSKQRSWKPALETIVET 156

[Close]

BLAST of Cp4.1LG04g13600.1 vs. TrEMBL
Match: A0A0L9ULE0_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan05g097800 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 3.7e-44
Identity = 97/167 (58.08%), Postives = 128/167 (76.65%), Query Frame = 1


Query: 1   MGNSAFCAPSMASNGAAKVLTLDGNLQSFTKPVKAAELMIEHSGKFLCDSGDLKVGHRIP 60
           MGN+A C PS+ +NG  KVL LDG L+S+TKP++AAELM+E+ G+F+CDS  LKVGHRI 
Sbjct: 1   MGNAASCTPSLTANGVFKVLFLDGRLESYTKPIRAAELMLEYPGQFVCDSTYLKVGHRIQ 60

Query: 61  GLLTEEYLEGGRLYFLLPMDLLYSVLTIEEMSSLTYIATKALKRGNSSGFGRIFPVLISE 120
           GLL +E LE  + YFLLPM+LLYSVLT EEMSSL Y A++A K  + +  G+IFPV  SE
Sbjct: 61  GLLADEELERRKFYFLLPMELLYSVLTHEEMSSLNYKASRATKHASFNNLGKIFPV-FSE 120

Query: 121 LCIFPSDVNGLKSADGDGENNQSSKPVQRLMSKQRSWKPALETIAET 168
            C+FPS++  L++A+   +  + ++PV+R  SKQRSW+PALETI ET
Sbjct: 121 FCMFPSELKRLEAAN---QVVREAEPVER-YSKQRSWRPALETIDET 162

[Close]

BLAST of Cp4.1LG04g13600.1 vs. TrEMBL
Match: A0A0S3QWG4_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G003900 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 3.7e-44
Identity = 97/167 (58.08%), Postives = 128/167 (76.65%), Query Frame = 1


Query: 1   MGNSAFCAPSMASNGAAKVLTLDGNLQSFTKPVKAAELMIEHSGKFLCDSGDLKVGHRIP 60
           MGN+A C PS+ +NG  KVL LDG L+S+TKP++AAELM+E+ G+F+CDS  LKVGHRI 
Sbjct: 1   MGNAASCTPSLTANGVFKVLFLDGRLESYTKPIRAAELMLEYPGQFVCDSTYLKVGHRIQ 60

Query: 61  GLLTEEYLEGGRLYFLLPMDLLYSVLTIEEMSSLTYIATKALKRGNSSGFGRIFPVLISE 120
           GLL +E LE  + YFLLPM+LLYSVLT EEMSSL Y A++A K  + +  G+IFPV  SE
Sbjct: 61  GLLADEELERRKFYFLLPMELLYSVLTHEEMSSLNYKASRATKHASFNNLGKIFPV-FSE 120

Query: 121 LCIFPSDVNGLKSADGDGENNQSSKPVQRLMSKQRSWKPALETIAET 168
            C+FPS++  L++A+   +  + ++PV+R  SKQRSW+PALETI ET
Sbjct: 121 FCMFPSELKRLEAAN---QVVREAEPVER-YSKQRSWRPALETIDET 162

[Close]

BLAST of Cp4.1LG04g13600.1 vs. TrEMBL
Match: I1K5B3_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_05G246800 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 8.3e-44
Identity = 93/167 (55.69%), Postives = 123/167 (73.65%), Query Frame = 1


Query: 1   MGNSAFCAPSMASNGAAKVLTLDGNLQSFTKPVKAAELMIEHSGKFLCDSGDLKVGHRIP 60
           MGN A C PS+  NG  KVL LDG L+++TKP++AAELM+E+SG+F+CDS  LKVGHRI 
Sbjct: 1   MGNVASCTPSLTPNGVFKVLFLDGRLEAYTKPMRAAELMLEYSGQFVCDSSYLKVGHRIH 60

Query: 61  GLLTEEYLEGGRLYFLLPMDLLYSVLTIEEMSSLTYIATKALKRGNSSGFGRIFPVLISE 120
           GLL ++ LE  + YFLLP++LL+SVLT EEMSSL Y A++A K  + +  G+IFPV  SE
Sbjct: 61  GLLADDQLEKRKFYFLLPIELLFSVLTHEEMSSLNYKASRATKHASFNNLGKIFPV-FSE 120

Query: 121 LCIFPSDVNGLKSADGDGENNQSSKPVQRLMSKQRSWKPALETIAET 168
            C+FPS++  L+ AD   +  +  +P  +  SKQRSW+PALETI ET
Sbjct: 121 FCMFPSELKRLEEADNQLQVVRDPEPAVKRYSKQRSWRPALETIDET 166

[Close]

BLAST of Cp4.1LG04g13600.1 vs. TAIR10
Match: AT1G18290.1 (AT1G18290.1 unknown protein)

HSP 1 Score: 107.5 bits (267), Expect = 8.5e-24
Identity = 70/182 (38.46%), Postives = 103/182 (56.59%), Query Frame = 1


Query: 1   MGNSAFCAPSM----ASNGAAKVLT-LDGNLQSFTKPVKAAELMIEHSGKFLCDSGDLKV 60
           MGN++ CAP +    +S+G  K+L    G L+ F+KP+K ++++  HSG F+ DS  L++
Sbjct: 1   MGNTSSCAPLIISTNSSSGVVKILAPFTGTLEVFSKPIKTSDIVSRHSGHFITDSTLLQI 60

Query: 61  GHRIPGLLTEEYLEGGR-LYFLLPMDLLYSVLTIEEMSSLTYIATKALKRGNSSGFGRIF 120
            HR+  +  +EYL   R LY LLP D+L+SVLT EE+S ++  A + L +   +   RIF
Sbjct: 61  SHRVTAVSPDEYLRPRRHLYLLLPTDMLFSVLTQEELSLISNKAAETLNKSRYNHLKRIF 120

Query: 121 PVLISELCIF---------PSDVNGLKSADGDGENNQSSKPVQRLMSKQRSWKPALETIA 168
           PV     CIF         PS VN  ++ DG  E  ++        SK  SW+P LETI 
Sbjct: 121 PV-----CIFPMTGDRRRNPSSVNEDRAHDG-VEIRETLDEKVLYESKHGSWRPKLETIV 176

[Close]

BLAST of Cp4.1LG04g13600.1 vs. TAIR10
Match: AT5G66580.1 (AT5G66580.1 unknown protein)

HSP 1 Score: 68.9 bits (167), Expect = 3.3e-12
Identity = 48/154 (31.17%), Postives = 76/154 (49.35%), Query Frame = 1


Query: 16  AAKVLTLDGNLQSFTKPVKAAELMIEHSGKFLCDSGDLKVGHRIPGLLTEEYLEGGRLYF 75
           +AK++ LDG LQ F+ PVK  +++ ++   F+C+S ++     +  +   E L  G+LYF
Sbjct: 14  SAKLILLDGTLQEFSSPVKVWQILQKNPTSFVCNSDEMDFDDAVSAVAGNEELRSGQLYF 73

Query: 76  LLPMDLLYSVLTIEEMSSLTYIATKALKRGNSSGFGRIF---PVLISELCIFPSDVNGLK 135
           +LP+  L   L  EEM++L   A+ AL +  S G G +     V  SE      ++ G+K
Sbjct: 74  VLPLTWLNHPLRAEEMAALAVKASSALTK--SGGVGWVSGDDDVTTSEKTYQKKNIAGVK 133

Query: 136 SADGDGENNQSSKPVQRLMSKQRSWKPALETIAE 167
           +  G G      K         R +   L TIAE
Sbjct: 134 TNGGGGRGCGKGK---------RRFTANLSTIAE 156

[Close]

BLAST of Cp4.1LG04g13600.1 vs. TAIR10
Match: AT4G37240.1 (AT4G37240.1 unknown protein)

HSP 1 Score: 67.0 bits (162), Expect = 1.3e-11
Identity = 41/139 (29.50%), Postives = 70/139 (50.36%), Query Frame = 1


Query: 7   CAPSMASNGA-AKVLTLDGNLQSFTKPVKAAELMIEHSGKFLCDSGDLKVGHRIPGLLTE 66
           C+ S ++  A AK++  DG +  F  PVK   +++++   F+C+S D+     +  +  +
Sbjct: 4   CSSSESTQVATAKLILQDGRMMEFANPVKVGYVLLKYPMCFICNSDDMDFDDAVAAISAD 63

Query: 67  EYLEGGRLYFLLPMDLLYSVLTIEEMSSLTYIATKALKRGNSSGFGRIFPVLISELCIFP 126
           E L+ G++YF LP+  L   L  EEM++L   A+ AL RG   G  R         C+ P
Sbjct: 64  EELQLGQIYFALPLCWLRQPLKAEEMAALAVKASSALMRGGGGGCRR--------KCVEP 123

Query: 127 SDVNGLKSADGDGENNQSS 145
              + L+   G G++   S
Sbjct: 124 IVSDKLRMRVGSGDDTVGS 134

[Close]

BLAST of Cp4.1LG04g13600.1 vs. TAIR10
Match: AT3G50800.1 (AT3G50800.1 unknown protein)

HSP 1 Score: 60.5 bits (145), Expect = 1.2e-09
Identity = 31/93 (33.33%), Postives = 51/93 (54.84%), Query Frame = 1


Query: 17  AKVLTLDGNLQSFTKPVKAAELMIEHSGKFLCDSGDLKVGHRIPGLLTEEYLEGGRLYFL 76
           AK++  DG LQ F+ PVK  +++ ++   F+C+S D+     +  +   E L  G LYF+
Sbjct: 15  AKLILPDGTLQEFSTPVKVWQILQKNPTSFVCNSDDMDFDDAVLAVPGSEDLRPGELYFV 74

Query: 77  LPMDLLYSVLTIEEMSSLTYIATKALKRGNSSG 110
           LP+  L   L  +EM++L   A+ AL +    G
Sbjct: 75  LPLTWLNHPLRADEMAALAVKASSALAKSGGGG 107

[Close]

BLAST of Cp4.1LG04g13600.1 vs. TAIR10
Match: AT1G76600.1 (AT1G76600.1 unknown protein)

HSP 1 Score: 54.7 bits (130), Expect = 6.5e-08
Identity = 34/122 (27.87%), Postives = 65/122 (53.28%), Query Frame = 1


Query: 11  MASNGAAKVLTLDGNLQSFTKPVKAAELMIEHSGK----------FLCDSGDLKVGHRIP 70
           ++S+  AK++T++G+L+ +  PV A++++   S            FLC+S  L     IP
Sbjct: 13  VSSSTTAKIVTINGDLREYDVPVLASQVLESESTSSSSSSSSSSYFLCNSDSLYYDDFIP 72

Query: 71  GLLTEEYLEGGRLYFLLPMDLLYSVLTIEEMSSLTYIATKAL-----KRGNSSGFGRIFP 118
            + ++E L+  ++YF+LP+      L+  +M++L   A+ A+     K+      GRI P
Sbjct: 73  AIESDEILQANQIYFVLPISKRQYRLSASDMAALAVKASVAIEKAAGKKNRRRRSGRISP 132

[Close]

BLAST of Cp4.1LG04g13600.1 vs. NCBI nr
Match: gi|659107474|ref|XP_008453692.1| (PREDICTED: uncharacterized protein LOC103494340 [Cucumis melo])

HSP 1 Score: 276.6 bits (706), Expect = 3.0e-71
Identity = 144/170 (84.71%), Postives = 152/170 (89.41%), Query Frame = 1


Query: 1   MGNSAFCAPSMASNGAAKVLTLDGNLQSFTKPVKAAELMIEHSGKFLCDSGDLKVGHRIP 60
           MGNSA CAPS+ASNGAAKVL+LDG LQSFTKPV AAELMIEHSGKFLCDS DLKVGHRI 
Sbjct: 1   MGNSASCAPSIASNGAAKVLSLDGTLQSFTKPVTAAELMIEHSGKFLCDSSDLKVGHRIQ 60

Query: 61  GLLTEEYLEGGRLYFLLPMDLLYSVLTIEEMSSLTYIATKALKRGNSSGFGRIFPVLISE 120
           GLL +E LE  RLYFLLPMDLLYSVLT+EEMSSLT+IATKALK+GNSSGFGRIFPVLISE
Sbjct: 61  GLLPDEDLEWRRLYFLLPMDLLYSVLTLEEMSSLTFIATKALKQGNSSGFGRIFPVLISE 120

Query: 121 LCIFPSDVNGLKSADGDGENNQSSKPVQRLMSKQRSWKPALETIAETSCT 171
            C  P+DV GLK  D DGE NQSSK V+RLMSKQRSWKPALETIAETSCT
Sbjct: 121 FCNSPADVKGLKLEDDDGE-NQSSKAVKRLMSKQRSWKPALETIAETSCT 169

[Close]

BLAST of Cp4.1LG04g13600.1 vs. NCBI nr
Match: gi|449439158|ref|XP_004137354.1| (PREDICTED: uncharacterized protein LOC101203132 [Cucumis sativus])

HSP 1 Score: 274.2 bits (700), Expect = 1.5e-70
Identity = 141/170 (82.94%), Postives = 149/170 (87.65%), Query Frame = 1


Query: 1   MGNSAFCAPSMASNGAAKVLTLDGNLQSFTKPVKAAELMIEHSGKFLCDSGDLKVGHRIP 60
           MGNSA CAPSMASNGA KVL+LDG LQSF+KPV AAELMIEHSGKFLCDS DLKVGHRI 
Sbjct: 1   MGNSASCAPSMASNGAPKVLSLDGRLQSFSKPVTAAELMIEHSGKFLCDSSDLKVGHRIQ 60

Query: 61  GLLTEEYLEGGRLYFLLPMDLLYSVLTIEEMSSLTYIATKALKRGNSSGFGRIFPVLISE 120
           GLL +E LE  RLYFLLPMDLLYSVLT+EEMSSLT+IATKALK+GNSSGFGRIFPVLISE
Sbjct: 61  GLLPDEDLEWRRLYFLLPMDLLYSVLTLEEMSSLTFIATKALKQGNSSGFGRIFPVLISE 120

Query: 121 LCIFPSDVNGLKSADGDGENNQSSKPVQRLMSKQRSWKPALETIAETSCT 171
            C  P+DV GLK  D D   NQSSK V+RLMSKQRSWKPALETIAETSCT
Sbjct: 121 FCNSPADVKGLKLEDDDDRENQSSKAVKRLMSKQRSWKPALETIAETSCT 170

[Close]

BLAST of Cp4.1LG04g13600.1 vs. NCBI nr
Match: gi|566205847|ref|XP_002322115.2| (hypothetical protein POPTR_0015s04770g [Populus trichocarpa])

HSP 1 Score: 188.0 bits (476), Expect = 1.4e-44
Identity = 104/167 (62.28%), Postives = 124/167 (74.25%), Query Frame = 1


Query: 1   MGNSAFCAPSMASNGAAKVLTLDGNLQSFTKPVKAAELMIEHSGKFLCDSGDLKVGHRIP 60
           MGN+  CAPS+ SNG  KVLT  GNLQ +TKPVKAAELM+E+ G+F+CDS  LKVGHR+ 
Sbjct: 1   MGNATSCAPSIISNGVVKVLTNGGNLQIYTKPVKAAELMLENPGQFVCDSTSLKVGHRVH 60

Query: 61  GLLTEEYLEGGRLYFLLPMDLLYSVLTIEEMSSLTYIATKALKRGNSSGFGRIFPVLISE 120
           GLL ++ LE  + YF+LPM+LLYSVLT EEMSSLTY ATKALK  N   FG+IFPVL SE
Sbjct: 61  GLLADDQLERRQFYFVLPMELLYSVLTHEEMSSLTYKATKALKYNN---FGKIFPVL-SE 120

Query: 121 LCIFPSDVNGLKSADGDGENNQSSKPVQRLMSKQRSWKPALETIAET 168
            CIFPS+   + S   +       +P++R  SKQRSWKPALETI ET
Sbjct: 121 FCIFPSEGKTMDSMATE------PQPMER-YSKQRSWKPALETIVET 156

[Close]

BLAST of Cp4.1LG04g13600.1 vs. NCBI nr
Match: gi|920700149|gb|KOM43374.1| (hypothetical protein LR48_Vigan05g097800 [Vigna angularis])

HSP 1 Score: 186.0 bits (471), Expect = 5.3e-44
Identity = 97/167 (58.08%), Postives = 128/167 (76.65%), Query Frame = 1


Query: 1   MGNSAFCAPSMASNGAAKVLTLDGNLQSFTKPVKAAELMIEHSGKFLCDSGDLKVGHRIP 60
           MGN+A C PS+ +NG  KVL LDG L+S+TKP++AAELM+E+ G+F+CDS  LKVGHRI 
Sbjct: 1   MGNAASCTPSLTANGVFKVLFLDGRLESYTKPIRAAELMLEYPGQFVCDSTYLKVGHRIQ 60

Query: 61  GLLTEEYLEGGRLYFLLPMDLLYSVLTIEEMSSLTYIATKALKRGNSSGFGRIFPVLISE 120
           GLL +E LE  + YFLLPM+LLYSVLT EEMSSL Y A++A K  + +  G+IFPV  SE
Sbjct: 61  GLLADEELERRKFYFLLPMELLYSVLTHEEMSSLNYKASRATKHASFNNLGKIFPV-FSE 120

Query: 121 LCIFPSDVNGLKSADGDGENNQSSKPVQRLMSKQRSWKPALETIAET 168
            C+FPS++  L++A+   +  + ++PV+R  SKQRSW+PALETI ET
Sbjct: 121 FCMFPSELKRLEAAN---QVVREAEPVER-YSKQRSWRPALETIDET 162

[Close]

BLAST of Cp4.1LG04g13600.1 vs. NCBI nr
Match: gi|950934828|ref|XP_014515333.1| (PREDICTED: uncharacterized protein LOC106773150 [Vigna radiata var. radiata])

HSP 1 Score: 185.3 bits (469), Expect = 9.1e-44
Identity = 97/167 (58.08%), Postives = 127/167 (76.05%), Query Frame = 1


Query: 1   MGNSAFCAPSMASNGAAKVLTLDGNLQSFTKPVKAAELMIEHSGKFLCDSGDLKVGHRIP 60
           MGN+A C PS+ +NG  KVL LDG L+S+TKP++AAELM+E+ G+F+CDS  LKVGHRI 
Sbjct: 1   MGNAASCTPSLTANGVFKVLFLDGRLESYTKPIRAAELMLEYPGQFVCDSTYLKVGHRIQ 60

Query: 61  GLLTEEYLEGGRLYFLLPMDLLYSVLTIEEMSSLTYIATKALKRGNSSGFGRIFPVLISE 120
           GLL +E LE  + YFLLPM+LLYSVLT EEMSSL Y A++A K  + +  G+IFPV  SE
Sbjct: 61  GLLADEELERRKFYFLLPMELLYSVLTHEEMSSLNYKASRATKHASFNNLGKIFPV-FSE 120

Query: 121 LCIFPSDVNGLKSADGDGENNQSSKPVQRLMSKQRSWKPALETIAET 168
            C+FPS++  L++A+   +  +  +PV+R  SKQRSW+PALETI ET
Sbjct: 121 FCMFPSELKRLEAAN---QVIREPEPVER-YSKQRSWRPALETIDET 162

The following BLAST results are available for this feature:

BLAST of Cp4.1LG04g13600.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG04g13600.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LSX3_CUCSA	1.0e-70	82.94	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G025190 PE=4 SV=1	[more]
A9PEN7_POPTR	9.8e-45	62.28	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0015s04770g PE=2 SV=1	[more]
A0A0L9ULE0_PHAAN	3.7e-44	58.08	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan05g097800 PE=4 SV=1	[more]
A0A0S3QWG4_PHAAN	3.7e-44	58.08	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G003900 PE=...	[more]
I1K5B3_SOYBN	8.3e-44	55.69	Uncharacterized protein OS=Glycine max GN=GLYMA_05G246800 PE=4 SV=1	[more]

BLAST of Cp4.1LG04g13600.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G18290.1	8.5e-24	38.46	unknown protein	[more]
AT5G66580.1	3.3e-12	31.17	unknown protein	[more]
AT4G37240.1	1.3e-11	29.50	unknown protein	[more]
AT3G50800.1	1.2e-09	33.33	unknown protein	[more]
AT1G76600.1	6.5e-08	27.87	unknown protein	[more]

BLAST of Cp4.1LG04g13600.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659107474\|ref\|XP_008453692.1\|	3.0e-71	84.71	PREDICTED: uncharacterized protein LOC103494340 [Cucumis melo]	[more]
gi\|449439158\|ref\|XP_004137354.1\|	1.5e-70	82.94	PREDICTED: uncharacterized protein LOC101203132 [Cucumis sativus]	[more]
gi\|566205847\|ref\|XP_002322115.2\|	1.4e-44	62.28	hypothetical protein POPTR_0015s04770g [Populus trichocarpa]	[more]
gi\|920700149\|gb\|KOM43374.1\|	5.3e-44	58.08	hypothetical protein LR48_Vigan05g097800 [Vigna angularis]	[more]
gi\|950934828\|ref\|XP_014515333.1\|	9.1e-44	58.08	PREDICTED: uncharacterized protein LOC106773150 [Vigna radiata var. radiata]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR025322	DUF4228_plant

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG04g13600	Cp4.1LG04g13600	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG04g13600.1:cds:001	Cp4.1LG04g13600.1:cds:001	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG04g13600.1	Cp4.1LG04g13600.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 1..166 score: 1.2
None	No IPR available	PANTHER	PTHR33052	FAMILY NOT NAMED	coord: 2..170 score: 1.3
None	No IPR available	PANTHER	PTHR33052:SF22	F15H18.19	coord: 2..170 score: 1.3