Cp4.1LG04g12690 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG04g12690
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUnknown protein
LocationCp4.1LG04 : 10563806 .. 10564510 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGAAGGAAATGATGCATGTTGAGAGTGGCGGCGGGAATGTGAAGAAGAGAATGATGAAGAGGAGGAGGAAGAAGAAAAACATTCACAAAGTGATCGATTATCTGTTATCTGATTGCTACTTATTTGCTCCTCTAATTTCTCCTTCACCCTTCAATTCTTATCGCGCACCCAGAAAAGGTTCATCCTTCATCTCAGATATCGAATTTAGGGAACGCCCAAAAGATCACCGGAGTTTTCTCAAGAAGATGGTGGATTATTTGAAATCCGATTGCTACATGTATGCTTCTCTCGTTGCACCACAATCCTTCAAAGGTACTTAAACTCCTCCTTTATACACAACGATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGACGAGTGCACTACAAATACAGGGCGTGCTGGGTATGTAAAAAGGGTAGTAACTACGGAAGTGTCGGCGAGAAGATTAATTCTCAGAGGGGACGAAGTTATGAGTGAATCCGCTGCGAACATGACTAAAGAGAGGAGAATTTGCAGCACTGATTTAATGGAAGCGGAGGTTGTTATGGATCAACCAAATGCGACAAGAAAGGAGCCACCTTTCTCACTCCACATGCCTGCCACTCGATGCTCTGTTCGCAATCAAAACACGCCTCGGCCTATTCGTATGGCTTCATAATGGACCCTCTCCCCTGTATTTGATAATATGTTTCATT

mRNA sequence

ATGGCGAAGGAAATGATGCATGTTGAGAGTGGCGGCGGGAATGTGAAGAAGAGAATGATGAAGAGGAGGAGGAAGAAGAAAAACATTCACAAAGTGATCGATTATCTGTTATCTGATTGCTACTTATTTGCTCCTCTAATTTCTCCTTCACCCTTCAATTCTTATCGCGCACCCAGAAAAGGTTCATCCTTCATCTCAGATATCGAATTTAGGGAACGCCCAAAAGATCACCGGAGTTTTCTCAAGAAGATGGTGGATTATTTGAAATCCGATTGCTACATGTATGCTTCTCTCGTTGCACCACAATCCTTCAAAGGGCGTGCTGGGTATGTAAAAAGGGTAGTAACTACGGAAGTGTCGGCGAGAAGATTAATTCTCAGAGGGGACGAAGTTATGAGTGAATCCGCTGCGAACATGACTAAAGAGAGGAGAATTTGCAGCACTGATTTAATGGAAGCGGAGGTTGTTATGGATCAACCAAATGCGACAAGAAAGGAGCCACCTTTCTCACTCCACATGCCTGCCACTCGATGCTCTGTTCGCAATCAAAACACGCCTCGGCCTATTCGTATGGCTTCATAATGGACCCTCTCCCCTGTATTTGATAATATGTTTCATT

Coding sequence (CDS)

ATGGCGAAGGAAATGATGCATGTTGAGAGTGGCGGCGGGAATGTGAAGAAGAGAATGATGAAGAGGAGGAGGAAGAAGAAAAACATTCACAAAGTGATCGATTATCTGTTATCTGATTGCTACTTATTTGCTCCTCTAATTTCTCCTTCACCCTTCAATTCTTATCGCGCACCCAGAAAAGGTTCATCCTTCATCTCAGATATCGAATTTAGGGAACGCCCAAAAGATCACCGGAGTTTTCTCAAGAAGATGGTGGATTATTTGAAATCCGATTGCTACATGTATGCTTCTCTCGTTGCACCACAATCCTTCAAAGGGCGTGCTGGGTATGTAAAAAGGGTAGTAACTACGGAAGTGTCGGCGAGAAGATTAATTCTCAGAGGGGACGAAGTTATGAGTGAATCCGCTGCGAACATGACTAAAGAGAGGAGAATTTGCAGCACTGATTTAATGGAAGCGGAGGTTGTTATGGATCAACCAAATGCGACAAGAAAGGAGCCACCTTTCTCACTCCACATGCCTGCCACTCGATGCTCTGTTCGCAATCAAAACACGCCTCGGCCTATTCGTATGGCTTCATAA

Protein sequence

MAKEMMHVESGGGNVKKRMMKRRRKKKNIHKVIDYLLSDCYLFAPLISPSPFNSYRAPRKGSSFISDIEFRERPKDHRSFLKKMVDYLKSDCYMYASLVAPQSFKGRAGYVKRVVTTEVSARRLILRGDEVMSESAANMTKERRICSTDLMEAEVVMDQPNATRKEPPFSLHMPATRCSVRNQNTPRPIRMAS
BLAST of Cp4.1LG04g12690 vs. TrEMBL
Match: A0A0A0LTL8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G294060 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 5.9e-22
Identity = 70/118 (59.32%), Postives = 81/118 (68.64%), Query Frame = 1

Query: 1   MAKEMMHVESGGGNVKKRMMKRRRKKKNIHKVIDYLLSDCYLFAPL-ISPSPF-NSYRAP 60
           MAK+M+HV  G G  KKR +KR  KKK IHKVIDYLLSDCYLFAPL ISPSP  NS+  P
Sbjct: 1   MAKKMVHVSGGIG--KKRRIKRS-KKKYIHKVIDYLLSDCYLFAPLLISPSPIDNSHVTP 60

Query: 61  RKGSSFISDIEFRERPKDHRSFLKKMVDYLKSDCYMYASLVAPQSFKGRAGYVKRVVT 117
            +G      IE R R KD R+ +KK  DYL+SDCYMYASLV P+S + R  Y  +  T
Sbjct: 61  TRG------IEIRGRTKDSRTLVKKFQDYLQSDCYMYASLVTPKSPRLRGIYTSKFGT 109

BLAST of Cp4.1LG04g12690 vs. TrEMBL
Match: A0A067KUZ1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04116 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 3.3e-12
Identity = 55/130 (42.31%), Postives = 82/130 (63.08%), Query Frame = 1

Query: 16  KKRMMKRRRKKKNIHKVIDYLLSDCYLFAPLISPSPFNSYRAPR-KGSSFISDIEFRERP 75
           K++   ++ KKK + KV+DYL SD Y+FAPLISP P  ++ A R   SS  +++E     
Sbjct: 11  KRKRSVKKNKKKVLKKVVDYLKSDSYMFAPLISP-PLTNFLASRIVPSSSTTEVETTGNK 70

Query: 76  KDH-RSFLKKMVDYLKSDCYMYASLVAPQ---SFKGRAGYVKRVVTTEVSARRLILRGDE 135
           K   +SF++K+ +YLKSD ++Y+ L  P+   S K   GYV+R VT E+S R+LI   D+
Sbjct: 71  KQRKKSFIQKVGEYLKSDTHLYSHLCVPRHPTSPKDFNGYVRR-VTMEISTRKLIRENDQ 130

Query: 136 VMSESAANMT 141
              E A+N+T
Sbjct: 131 STIE-ASNIT 137

BLAST of Cp4.1LG04g12690 vs. TrEMBL
Match: F6HYP2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0037g01220 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 5.2e-10
Identity = 46/95 (48.42%), Postives = 58/95 (61.05%), Query Frame = 1

Query: 8   VESGGGNVKKRMMKRRRKKKNIHKVIDYLLSDCYLFAPLISPSPFNSYRAPRKGSSFISD 67
           V SG G   KR MK+  KKK + KV+DYL SD Y+FAPLI   P NS  AP  G      
Sbjct: 5   VASGSGVQNKRPMKKNNKKKWLQKVLDYLKSDSYMFAPLIF-HPTNSAAAP--GVEMTKP 64

Query: 68  IEFRERPKDHRSFLKKMVDYLKSDCYMYASLVAPQ 103
           I+     +D+R+ L+K+ +YLKSD YMYA L+  Q
Sbjct: 65  IK-----EDNRTLLEKVEEYLKSDNYMYAPLIITQ 91

BLAST of Cp4.1LG04g12690 vs. TrEMBL
Match: M5XIK5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa016338mg PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.5e-09
Identity = 41/87 (47.13%), Postives = 61/87 (70.11%), Query Frame = 1

Query: 15  VKKRMMKRRRKKKNIHKVIDYLLSDCYLFAPLISPSPFNSYRAPRKGSSFISDIEFRERP 74
           V+K+   +R KKK + KVID+L+S+ Y+FAPLIS  P + + +P K  + I+ +E R+  
Sbjct: 5   VQKKRPIKRNKKKLLKKVIDFLISNSYMFAPLISHPP-HGFSSPMKTRASITGVEGRKPI 64

Query: 75  K-DHRSFLKKMVDYLKSDCYMYASLVA 101
           K +++  LKK+ DYLKSD YMYA L+A
Sbjct: 65  KGNNKRLLKKVGDYLKSDSYMYAPLLA 90

BLAST of Cp4.1LG04g12690 vs. TrEMBL
Match: W9RKH4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_023018 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.1e-07
Identity = 51/124 (41.13%), Postives = 67/124 (54.03%), Query Frame = 1

Query: 13  GNVKKRMMKRRRKKKN--IHKVIDYLLSDCYLFAPLISP-SPFNSYRAPRKGSSFISDIE 72
           G  KKR+  +R KKK   + KV+DYL  DC LFAPL S  S F S++           IE
Sbjct: 11  GVQKKRLKNKRNKKKYNLLDKVLDYLKFDCCLFAPLTSSNSDFRSHK-----------IE 70

Query: 73  FRERPKDH-RSFLKKMVDYLKSDCYMYASLVAPQS-----FKGRAGYVKRVVTTEVSARR 128
            +E  K++ +  +KK+ +YL SD YMYA LV P        KG   Y K  VT EV+ R 
Sbjct: 71  MKENAKENKKKLVKKVGEYLISDSYMYAPLVVPPKPLWVPTKGPQRYTKH-VTVEVARRS 122

BLAST of Cp4.1LG04g12690 vs. TAIR10
Match: AT5G57790.1 (AT5G57790.1 unknown protein)

HSP 1 Score: 54.7 bits (130), Expect = 7.4e-08
Identity = 35/118 (29.66%), Postives = 59/118 (50.00%), Query Frame = 1

Query: 17  KRMMKRRRKKKNIHKVIDYLLSDCYLFAPLISPSP-----FNSYRAPRKGSSFISDIEFR 76
           ++ +KR++ ++ +  ++ YL SD YLFAPL S  P      ++        S + DI   
Sbjct: 12  RKKLKRKKCRRLVRSIVTYLKSDTYLFAPLFSNFPPLTTEIDTPPPSNSKPSTVDDISME 71

Query: 77  -------ERPKDHRSFLKKMVDYLKSDCYMYASLVAPQSFKGRAGYVKRVVTTEVSAR 123
                  E+    R   +K+ +YLKSDCYMY+ +++     G +   K  +T EVS +
Sbjct: 72  GFESLGIEKLIKKRRMSEKVKEYLKSDCYMYSPMISSPPKLGSSVKGKMQITMEVSTK 129

BLAST of Cp4.1LG04g12690 vs. NCBI nr
Match: gi|659086186|ref|XP_008443802.1| (PREDICTED: uncharacterized protein LOC103487306 isoform X1 [Cucumis melo])

HSP 1 Score: 120.2 bits (300), Expect = 4.1e-24
Identity = 72/124 (58.06%), Postives = 85/124 (68.55%), Query Frame = 1

Query: 1   MAKEMMHVESGGGN-VKKRMMKRRRKKKNIHKVIDYLLSDCYLFAP-LISPSPF-NSYRA 60
           MAK+M+HV  GGG  + K+ + +R KKK IHKVIDYLLSDCYLFAP LISPSP  NS+  
Sbjct: 1   MAKKMVHVGGGGGGGIGKKRLIKRSKKKYIHKVIDYLLSDCYLFAPLLISPSPINNSHVT 60

Query: 61  PRKGSSFISDIEFRERPKDHRSFLKKMVDYLKSDCYMYASLVAPQSFK-------GRAGY 115
           P +G      IE R R KD+RS +KK  DYLKSDCYMYASLV P+S +       GR  Y
Sbjct: 61  PTRG------IEIRGRTKDNRSLVKKFQDYLKSDCYMYASLVTPKSPRLREKGETGRVEY 118

BLAST of Cp4.1LG04g12690 vs. NCBI nr
Match: gi|659086188|ref|XP_008443803.1| (PREDICTED: uncharacterized protein LOC103487306 isoform X2 [Cucumis melo])

HSP 1 Score: 120.2 bits (300), Expect = 4.1e-24
Identity = 72/124 (58.06%), Postives = 85/124 (68.55%), Query Frame = 1

Query: 1   MAKEMMHVESGGGN-VKKRMMKRRRKKKNIHKVIDYLLSDCYLFAP-LISPSPF-NSYRA 60
           MAK+M+HV  GGG  + K+ + +R KKK IHKVIDYLLSDCYLFAP LISPSP  NS+  
Sbjct: 1   MAKKMVHVGGGGGGGIGKKRLIKRSKKKYIHKVIDYLLSDCYLFAPLLISPSPINNSHVT 60

Query: 61  PRKGSSFISDIEFRERPKDHRSFLKKMVDYLKSDCYMYASLVAPQSFK-------GRAGY 115
           P +G      IE R R KD+RS +KK  DYLKSDCYMYASLV P+S +       GR  Y
Sbjct: 61  PTRG------IEIRGRTKDNRSLVKKFQDYLKSDCYMYASLVTPKSPRLREKGETGRVEY 118

BLAST of Cp4.1LG04g12690 vs. NCBI nr
Match: gi|659086190|ref|XP_008443804.1| (PREDICTED: uncharacterized protein LOC103487306 isoform X3 [Cucumis melo])

HSP 1 Score: 117.5 bits (293), Expect = 2.6e-23
Identity = 67/106 (63.21%), Postives = 78/106 (73.58%), Query Frame = 1

Query: 1   MAKEMMHVESGGGN-VKKRMMKRRRKKKNIHKVIDYLLSDCYLFAP-LISPSPF-NSYRA 60
           MAK+M+HV  GGG  + K+ + +R KKK IHKVIDYLLSDCYLFAP LISPSP  NS+  
Sbjct: 1   MAKKMVHVGGGGGGGIGKKRLIKRSKKKYIHKVIDYLLSDCYLFAPLLISPSPINNSHVT 60

Query: 61  PRKGSSFISDIEFRERPKDHRSFLKKMVDYLKSDCYMYASLVAPQS 104
           P +G      IE R R KD+RS +KK  DYLKSDCYMYASLV P+S
Sbjct: 61  PTRG------IEIRGRTKDNRSLVKKFQDYLKSDCYMYASLVTPKS 100

BLAST of Cp4.1LG04g12690 vs. NCBI nr
Match: gi|700210179|gb|KGN65275.1| (hypothetical protein Csa_1G294060 [Cucumis sativus])

HSP 1 Score: 112.5 bits (280), Expect = 8.5e-22
Identity = 70/118 (59.32%), Postives = 81/118 (68.64%), Query Frame = 1

Query: 1   MAKEMMHVESGGGNVKKRMMKRRRKKKNIHKVIDYLLSDCYLFAPL-ISPSPF-NSYRAP 60
           MAK+M+HV  G G  KKR +KR  KKK IHKVIDYLLSDCYLFAPL ISPSP  NS+  P
Sbjct: 1   MAKKMVHVSGGIG--KKRRIKRS-KKKYIHKVIDYLLSDCYLFAPLLISPSPIDNSHVTP 60

Query: 61  RKGSSFISDIEFRERPKDHRSFLKKMVDYLKSDCYMYASLVAPQSFKGRAGYVKRVVT 117
            +G      IE R R KD R+ +KK  DYL+SDCYMYASLV P+S + R  Y  +  T
Sbjct: 61  TRG------IEIRGRTKDSRTLVKKFQDYLQSDCYMYASLVTPKSPRLRGIYTSKFGT 109

BLAST of Cp4.1LG04g12690 vs. NCBI nr
Match: gi|778660341|ref|XP_011656059.1| (PREDICTED: uncharacterized protein LOC105435617 [Cucumis sativus])

HSP 1 Score: 110.9 bits (276), Expect = 2.5e-21
Identity = 67/105 (63.81%), Postives = 76/105 (72.38%), Query Frame = 1

Query: 1   MAKEMMHVESGGGNVKKRMMKRRRKKKNIHKVIDYLLSDCYLFAP-LISPSPF-NSYRAP 60
           MAK+M+HV  G G  KKR +KR  KKK IHKVIDYLLSDCYLFAP LISPSP  NS+  P
Sbjct: 1   MAKKMVHVSGGIG--KKRRIKRS-KKKYIHKVIDYLLSDCYLFAPLLISPSPIDNSHVTP 60

Query: 61  RKGSSFISDIEFRERPKDHRSFLKKMVDYLKSDCYMYASLVAPQS 104
            +G      IE R R KD R+ +KK  DYL+SDCYMYASLV P+S
Sbjct: 61  TRG------IEIRGRTKDSRTLVKKFQDYLQSDCYMYASLVTPKS 96

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LTL8_CUCSA5.9e-2259.32Uncharacterized protein OS=Cucumis sativus GN=Csa_1G294060 PE=4 SV=1[more]
A0A067KUZ1_JATCU3.3e-1242.31Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04116 PE=4 SV=1[more]
F6HYP2_VITVI5.2e-1048.42Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0037g01220 PE=4 SV=... [more]
M5XIK5_PRUPE1.5e-0947.13Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa016338mg PE=4 SV=1[more]
W9RKH4_9ROSA1.1e-0741.13Uncharacterized protein OS=Morus notabilis GN=L484_023018 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G57790.17.4e-0829.66 unknown protein[more]
Match NameE-valueIdentityDescription
gi|659086186|ref|XP_008443802.1|4.1e-2458.06PREDICTED: uncharacterized protein LOC103487306 isoform X1 [Cucumis melo][more]
gi|659086188|ref|XP_008443803.1|4.1e-2458.06PREDICTED: uncharacterized protein LOC103487306 isoform X2 [Cucumis melo][more]
gi|659086190|ref|XP_008443804.1|2.6e-2363.21PREDICTED: uncharacterized protein LOC103487306 isoform X3 [Cucumis melo][more]
gi|700210179|gb|KGN65275.1|8.5e-2259.32hypothetical protein Csa_1G294060 [Cucumis sativus][more]
gi|778660341|ref|XP_011656059.1|2.5e-2163.81PREDICTED: uncharacterized protein LOC105435617 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG04g12690.1Cp4.1LG04g12690.1mRNA


The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG04g12690Cucurbita pepo (Zucchini)cpecpeB129
Cp4.1LG04g12690Cucurbita pepo (Zucchini)cpecpeB360
Cp4.1LG04g12690Cucurbita pepo (Zucchini)cpecpeB456
Cp4.1LG04g12690Cucurbita pepo (Zucchini)cpecpeB498
Cp4.1LG04g12690Cucurbita pepo (Zucchini)cpecpeB499
Cp4.1LG04g12690Cucumber (Gy14) v1cgycpeB0094
Cp4.1LG04g12690Cucumber (Gy14) v1cgycpeB0175
Cp4.1LG04g12690Cucumber (Gy14) v1cgycpeB0710
Cp4.1LG04g12690Cucurbita maxima (Rimu)cmacpeB092
Cp4.1LG04g12690Cucurbita maxima (Rimu)cmacpeB195
Cp4.1LG04g12690Cucurbita maxima (Rimu)cmacpeB782
Cp4.1LG04g12690Cucurbita moschata (Rifu)cmocpeB068
Cp4.1LG04g12690Cucurbita moschata (Rifu)cmocpeB168
Cp4.1LG04g12690Cucurbita moschata (Rifu)cmocpeB736
Cp4.1LG04g12690Wild cucumber (PI 183967)cpecpiB667
Cp4.1LG04g12690Wild cucumber (PI 183967)cpecpiB682
Cp4.1LG04g12690Cucumber (Chinese Long) v2cpecuB664
Cp4.1LG04g12690Cucumber (Chinese Long) v2cpecuB678
Cp4.1LG04g12690Bottle gourd (USVL1VR-Ls)cpelsiB528
Cp4.1LG04g12690Bottle gourd (USVL1VR-Ls)cpelsiB558
Cp4.1LG04g12690Watermelon (Charleston Gray)cpewcgB614
Cp4.1LG04g12690Watermelon (97103) v1cpewmB659
Cp4.1LG04g12690Watermelon (97103) v1cpewmB678
Cp4.1LG04g12690Melon (DHL92) v3.5.1cpemeB621
Cp4.1LG04g12690Melon (DHL92) v3.5.1cpemeB636
Cp4.1LG04g12690Melon (DHL92) v3.5.1cpemeB643
Cp4.1LG04g12690Cucumber (Gy14) v2cgybcpeB233
Cp4.1LG04g12690Melon (DHL92) v3.6.1cpemedB760
Cp4.1LG04g12690Silver-seed gourdcarcpeB0084
Cp4.1LG04g12690Silver-seed gourdcarcpeB0186
Cp4.1LG04g12690Cucumber (Chinese Long) v3cpecucB0827
Cp4.1LG04g12690Cucumber (Chinese Long) v3cpecucB0849
Cp4.1LG04g12690Wax gourdcpewgoB0833