Cp4.1LG04g12690 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGAAGGAAATGATGCATGTTGAGAGTGGCGGCGGGAATGTGAAGAAGAGAATGATGAAGAGGAGGAGGAAGAAGAAAAACATTCACAAAGTGATCGATTATCTGTTATCTGATTGCTACTTATTTGCTCCTCTAATTTCTCCTTCACCCTTCAATTCTTATCGCGCACCCAGAAAAGGTTCATCCTTCATCTCAGATATCGAATTTAGGGAACGCCCAAAAGATCACCGGAGTTTTCTCAAGAAGATGGTGGATTATTTGAAATCCGATTGCTACATGTATGCTTCTCTCGTTGCACCACAATCCTTCAAAGGTACTTAAACTCCTCCTTTATACACAACGATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGACGAGTGCACTACAAATACAGGGCGTGCTGGGTATGTAAAAAGGGTAGTAACTACGGAAGTGTCGGCGAGAAGATTAATTCTCAGAGGGGACGAAGTTATGAGTGAATCCGCTGCGAACATGACTAAAGAGAGGAGAATTTGCAGCACTGATTTAATGGAAGCGGAGGTTGTTATGGATCAACCAAATGCGACAAGAAAGGAGCCACCTTTCTCACTCCACATGCCTGCCACTCGATGCTCTGTTCGCAATCAAAACACGCCTCGGCCTATTCGTATGGCTTCATAATGGACCCTCTCCCCTGTATTTGATAATATGTTTCATT ATGGCGAAGGAAATGATGCATGTTGAGAGTGGCGGCGGGAATGTGAAGAAGAGAATGATGAAGAGGAGGAGGAAGAAGAAAAACATTCACAAAGTGATCGATTATCTGTTATCTGATTGCTACTTATTTGCTCCTCTAATTTCTCCTTCACCCTTCAATTCTTATCGCGCACCCAGAAAAGGTTCATCCTTCATCTCAGATATCGAATTTAGGGAACGCCCAAAAGATCACCGGAGTTTTCTCAAGAAGATGGTGGATTATTTGAAATCCGATTGCTACATGTATGCTTCTCTCGTTGCACCACAATCCTTCAAAGGGCGTGCTGGGTATGTAAAAAGGGTAGTAACTACGGAAGTGTCGGCGAGAAGATTAATTCTCAGAGGGGACGAAGTTATGAGTGAATCCGCTGCGAACATGACTAAAGAGAGGAGAATTTGCAGCACTGATTTAATGGAAGCGGAGGTTGTTATGGATCAACCAAATGCGACAAGAAAGGAGCCACCTTTCTCACTCCACATGCCTGCCACTCGATGCTCTGTTCGCAATCAAAACACGCCTCGGCCTATTCGTATGGCTTCATAATGGACCCTCTCCCCTGTATTTGATAATATGTTTCATT ATGGCGAAGGAAATGATGCATGTTGAGAGTGGCGGCGGGAATGTGAAGAAGAGAATGATGAAGAGGAGGAGGAAGAAGAAAAACATTCACAAAGTGATCGATTATCTGTTATCTGATTGCTACTTATTTGCTCCTCTAATTTCTCCTTCACCCTTCAATTCTTATCGCGCACCCAGAAAAGGTTCATCCTTCATCTCAGATATCGAATTTAGGGAACGCCCAAAAGATCACCGGAGTTTTCTCAAGAAGATGGTGGATTATTTGAAATCCGATTGCTACATGTATGCTTCTCTCGTTGCACCACAATCCTTCAAAGGGCGTGCTGGGTATGTAAAAAGGGTAGTAACTACGGAAGTGTCGGCGAGAAGATTAATTCTCAGAGGGGACGAAGTTATGAGTGAATCCGCTGCGAACATGACTAAAGAGAGGAGAATTTGCAGCACTGATTTAATGGAAGCGGAGGTTGTTATGGATCAACCAAATGCGACAAGAAAGGAGCCACCTTTCTCACTCCACATGCCTGCCACTCGATGCTCTGTTCGCAATCAAAACACGCCTCGGCCTATTCGTATGGCTTCATAA MAKEMMHVESGGGNVKKRMMKRRRKKKNIHKVIDYLLSDCYLFAPLISPSPFNSYRAPRKGSSFISDIEFRERPKDHRSFLKKMVDYLKSDCYMYASLVAPQSFKGRAGYVKRVVTTEVSARRLILRGDEVMSESAANMTKERRICSTDLMEAEVVMDQPNATRKEPPFSLHMPATRCSVRNQNTPRPIRMAS
BLAST of Cp4.1LG04g12690 vs. TrEMBL
Match: A0A0A0LTL8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G294060 PE=4 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 5.9e-22 Identity = 70/118 (59.32%), Postives = 81/118 (68.64%), Query Frame = 1
BLAST of Cp4.1LG04g12690 vs. TrEMBL
Match: A0A067KUZ1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04116 PE=4 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 3.3e-12 Identity = 55/130 (42.31%), Postives = 82/130 (63.08%), Query Frame = 1
BLAST of Cp4.1LG04g12690 vs. TrEMBL
Match: F6HYP2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0037g01220 PE=4 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 5.2e-10 Identity = 46/95 (48.42%), Postives = 58/95 (61.05%), Query Frame = 1
BLAST of Cp4.1LG04g12690 vs. TrEMBL
Match: M5XIK5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa016338mg PE=4 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 1.5e-09 Identity = 41/87 (47.13%), Postives = 61/87 (70.11%), Query Frame = 1
BLAST of Cp4.1LG04g12690 vs. TrEMBL
Match: W9RKH4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_023018 PE=4 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 1.1e-07 Identity = 51/124 (41.13%), Postives = 67/124 (54.03%), Query Frame = 1
BLAST of Cp4.1LG04g12690 vs. TAIR10
Match: AT5G57790.1 (AT5G57790.1 unknown protein) HSP 1 Score: 54.7 bits (130), Expect = 7.4e-08 Identity = 35/118 (29.66%), Postives = 59/118 (50.00%), Query Frame = 1
BLAST of Cp4.1LG04g12690 vs. NCBI nr
Match: gi|659086186|ref|XP_008443802.1| (PREDICTED: uncharacterized protein LOC103487306 isoform X1 [Cucumis melo]) HSP 1 Score: 120.2 bits (300), Expect = 4.1e-24 Identity = 72/124 (58.06%), Postives = 85/124 (68.55%), Query Frame = 1
BLAST of Cp4.1LG04g12690 vs. NCBI nr
Match: gi|659086188|ref|XP_008443803.1| (PREDICTED: uncharacterized protein LOC103487306 isoform X2 [Cucumis melo]) HSP 1 Score: 120.2 bits (300), Expect = 4.1e-24 Identity = 72/124 (58.06%), Postives = 85/124 (68.55%), Query Frame = 1
BLAST of Cp4.1LG04g12690 vs. NCBI nr
Match: gi|659086190|ref|XP_008443804.1| (PREDICTED: uncharacterized protein LOC103487306 isoform X3 [Cucumis melo]) HSP 1 Score: 117.5 bits (293), Expect = 2.6e-23 Identity = 67/106 (63.21%), Postives = 78/106 (73.58%), Query Frame = 1
BLAST of Cp4.1LG04g12690 vs. NCBI nr
Match: gi|700210179|gb|KGN65275.1| (hypothetical protein Csa_1G294060 [Cucumis sativus]) HSP 1 Score: 112.5 bits (280), Expect = 8.5e-22 Identity = 70/118 (59.32%), Postives = 81/118 (68.64%), Query Frame = 1
BLAST of Cp4.1LG04g12690 vs. NCBI nr
Match: gi|778660341|ref|XP_011656059.1| (PREDICTED: uncharacterized protein LOC105435617 [Cucumis sativus]) HSP 1 Score: 110.9 bits (276), Expect = 2.5e-21 Identity = 67/105 (63.81%), Postives = 76/105 (72.38%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |