Cp4.1LG02g11120 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTTGGGCCTGGGTTGAATATTGGAGGCCCATTAGCAATTTTGCTATTCTAGGGCTCTATCCTGCTTCCGCCGAGTCTCCTTCGTCCTGCTACATTCGAAGAACCAGATTTGTGTTCGGTGCTCCGTGATTCTCTGTAAGCCGAAGGCGCTAAACGTGAACGCGAACCACCATGTTATTGGGGGATATACCACNGGGTTGAATATTGGAGGCCCATTAGCAATTTTGCTATTCTAGGGCTCTATCCTGCTTCCGCCGAGTCTCCTTCGTCCTGCTACATTCGAAGAACCAGATTTGTGTTGGGTGCTCCGTGATTCTCTGTAAGCCGAAGGCGCTGAACGTGAACGCGAACCACCATGTTATTGGGGGATATACCACCTAACCAGACCATATACATTAAGAATCTCAATGAGAAGGTCAAGAAAGAAGGTAATTCTGTTCGCTTTTTGCTTATCCCTTGTGTAAATGATTTTTTCTCCTGTTCAATGAGTAGATAGCTTAGTGAGTTGAACTGATCTGCGTGACATTTTATTATTTTCATTTCGCTTTCAGCTCAAAATTCAGCTACTGTCTTGCCTGTTTTTGGGCGAAGTTTTGCTTGTTTTTGTTACCGTTTTAAATATTTCTGATTGCCACACAGTGATTACTCGAGAATGTAGATATTACAGTTGGAATTTGGTTTTTAGGGTGAGGGACCTGATGGCTTGAAATTTTAGTTTGGATAATGCGACGGCTGCTTGGTTTACCATTTACCATGGCATTTTGAATTTTGTTTACTGTCTTGGTTGATTAGCCCTCTTTATATATATATATATATATATATATATATAATAATTTGGGCTTTAGTTTTTGGGTTTTGAAAATTAAGCTGGTGAACACTACTTCCATATTGTTTTCTTTGTTTTTCGAAGTTCAAGCTAAAATTTGGAAACCAAGGAAAGGTTATTTTTAGAAACGTGTTTTTGATCTTGGAATTTGGCATGTATATTTGGAAATATGAAAGCCATTATAAGGAAATGATGAGAAAACAGGCTCAATTTTCAAAAATAAAAAACTAAAAACCAAATGGTTAATTATACATGGCCTTAGTGTTCAGTTTTTGACAATGTTGCATCACATGTGAAGCGTGGCTTTCAATCCTATGGCTTCTTAATGTTTGGATTTGATGGTAGACTGAATTTCTCCTGTTTGACAGAATTGAAGAGATCCCTCTATGCTTTGTTTTCTCAATATGGAAGGATCCTTGACGTTGTTGCCTTGAAGACCCCGAGGCTTCGAGGGCAAGCATGGGTTGCATTTAGTGAAGTGACTGCAGCTAGCAATGCTGTGCGGCAGATGCAAAACTTCCCATTCTATGATAAGCCTATGGTTCGTTTCTAGCTGATCACATTTTTTGAACTTGCTTTTCATAGTCTTTTTGTGGACTTTCATCTATGGTCTGTTCCAGTACGCTTTGAAGTTCTTTGGATAACTGTGGATAGTTTGCTGGTCAGGGAATTGAAGTGATCCTGAGTGTTATGTGTGAAGAGCGTCATGTGAATATCTATACCCAACAACACTTAACATTATGACAGTTTAGCTGCTTTGCATATCCAAAATTATGTCTTTTATCTTTTTGAATATGTAGGCTTATTATATTGGCTATATGCCTTCTTTGATCATTTTGAGATCTTCATTTGCAACTCCTGTCTATTGACATTTCTTCTGTCAATGTATGCCATCATACTTATGTAGTGCTTAAAATGTTGTTGACACACTAAATCTTGATATTGATTGTAAACTATGCGAAGTGATTTTTTTTCTCGTTTTTCTAACATAACCACAGACGTATCCATAATTCTATTTGGTACAAACAAGTATTGTTACTATCTTTTCTTCTAAAAAAATCAGTTAGTTTTTGTTTCATCTTGAAAATTTGTGTATTGTCTTGTTGCCCATTCATACAATTTTCCGATATTGGATATGTAGATGACTTTCTGTTGCCTATCCCAAAAGTTTGAAATGACTATTTTTCTTTTGTGCAGCGAATTCAATATGCCAAAACCAAATCAGATTGTGTTGCTAAAGCTGATGGAAGCTTTGTGCCAAGGGAGAAGAAGAAGAAGCAAGAGGAAAAAGGTGATTGTAACACCAACTACTCTTTCTAAATTTCTTTTGAACTTCGTTGGTGGACATAATCTTGAAGTTGGTGGGGGGACAGTTATAATTAAACTATGAAACATTGTTTCAGGGAACTGGTTGGAAATAACCTCTCATTTTCCAATTGCATTGCTTTTAAGAAGTTGCAAGGTTTCTAAACTGTGTTCCTTATTATCTTTTAATTTGCACATGCAGCTGAGAGAAAGCGACGTACTGACGAAACACACCAGTCTGCGATGCCCAATGGAGCAACCGCTGAGAATGGAGGTTCAAATGTAAGTTTCTTCACTCTTCTTCTTTTTTTCTTTTTTTCTTTTTTGCTTTCGTTTTTGTGATGTCAAATGGATATTTTTCTTCTTCATATGAGCTGTATTGTATTAATTGCTACTCTATAAGTGGTCCTGAGCATTAATTGTATGAGTCTTTTTGGATGGCGTGGTTCTCTGGTTAGTTGTTTTTTCTTCTCATCAGTTTTTAAAGACATTGGTGTCTATTTCAATTAGATTTCATGTTAGTGCCCCTTAGATCAGGCAATGTTATTCAACTTTTTTTCACAATTACTTATGCTAAGAACGCGTCTTCATTGTGTGCAGGCCACATTCCGTCATGCAAATCCAAGCGCTCCAGAAGCTACTCCAAACAACATACTATTTATTGAGAATTTGCCTCATGAAACTTCGAGTATGATGTTGCAAGTCCTCTTCCAACAATATCCTGGATTCAGGGAAGTCCGAATGATTGAAGCAAAGCCGGGTATTGCTTTTGTTGAGTTTGAAGATGATGTTCAATCCTCTATGGCGATGCAGGCTCTTCAGGGCTTTAAAATTGATCCCCAACATCCCATGGCCATCTCTTTTGCAAAGAAGTAACTCAGCCTTTGTTCTACTCTTAGTTTTAGTAACGTGCAGCGGGACTATGTTAATGTCGGAGCATATTAGTATGAGTCAGAAGTTTTTATGTAAAGTTCAGATATCCTTCCCCTCCTTTCAACGATAAAAGAGAACGAACGAACGAAAACATTGGGATAGGCAGGCCACTGATTCCAAAAGATGAGGATATCAAACCAAGGGACTCAATGAGTTTGCCGGCTGTGTTCATTTCAGTTTCCAGCGGTAGCAAGAAAATAGTTTTATGTTAGGTTGTCAAAATGGAAACAGAAAGAACCAATCAAAGACTTATTTCTAAATGTGTTCATGTACTACAGGGAGATGAAATTCAGGAAAACAATGTTCGATTACATTTTTGCATGAATATTTCGTTCTTGACAATGAAGTGTTGATAAACATTTCTGTCAAAGTCTCAGGGACAGAGCTGCTTGGTGCGTGCATTATCTTCCACTGGTCGATTGTG TTTTGGGCCTGGGTTGAATATTGGAGGCCCATTAGCAATTTTGCTATTCTAGGGCTCTATCCTGCTTCCGCCGAGTCTCCTTCGTCCTGCTACATTCGAAGAACCAGATTTGTGTTGGGTGCTCCGTGATTCTCTGTAAGCCGAAGGCGCTGAACGTGAACGCGAACCACCATGTTATTGGGGGATATACCACCTAACCAGACCATATACATTAAGAATCTCAATGAGAAGGTCAAGAAAGAAGAATTGAAGAGATCCCTCTATGCTTTGTTTTCTCAATATGGAAGGATCCTTGACGTTGTTGCCTTGAAGACCCCGAGGCTTCGAGGGCAAGCATGGGTTGCATTTAGTGAAGTGACTGCAGCTAGCAATGCTGTGCGGCAGATGCAAAACTTCCCATTCTATGATAAGCCTATGCGAATTCAATATGCCAAAACCAAATCAGATTGTGTTGCTAAAGCTGATGGAAGCTTTGTGCCAAGGGAGAAGAAGAAGAAGCAAGAGGAAAAAGCTGAGAGAAAGCGACGTACTGACGAAACACACCAGTCTGCGATGCCCAATGGAGCAACCGCTGAGAATGGAGGTTCAAATGCCACATTCCGTCATGCAAATCCAAGCGCTCCAGAAGCTACTCCAAACAACATACTATTTATTGAGAATTTGCCTCATGAAACTTCGAGTATGATGTTGCAAGTCCTCTTCCAACAATATCCTGGATTCAGGGAAGTCCGAATGATTGAAGCAAAGCCGGGTATTGCTTTTGTTGAGTTTGAAGATGATGTTCAATCCTCTATGGCGATGCAGGCTCTTCAGGGCTTTAAAATTGATCCCCAACATCCCATGGCCATCTCTTTTGCAAAGAAGTAACTCAGCCTTTGTTCTACTCTTAGTTTTAGTAACGTGCAGCGGGACTATGTTAATGTCGGAGCATATTAGTATGAGTCAGAAGTTTTTATGTAAAGTTCAGATATCCTTCCCCTCCTTTCAACGATAAAAGAGAACGAACGAACGAAAACATTGGGATAGGCAGGCCACTGATTCCAAAAGATGAGGATATCAAACCAAGGGACTCAATGAGTTTGCCGGCTGTGTTCATTTCAGTTTCCAGCGGTAGCAAGAAAATAGTTTTATGTTAGGTTGTCAAAATGGAAACAGAAAGAACCAATCAAAGACTTATTTCTAAATGTGTTCATGTACTACAGGGAGATGAAATTCAGGAAAACAATGTTCGATTACATTTTTGCATGAATATTTCGTTCTTGACAATGAAGTGTTGATAAACATTTCTGTCAAAGTCTCAGGGACAGAGCTGCTTGGTGCGTGCATTATCTTCCACTGGTCGATTGTG ATGTTATTGGGGGATATACCACCTAACCAGACCATATACATTAAGAATCTCAATGAGAAGGTCAAGAAAGAAGAATTGAAGAGATCCCTCTATGCTTTGTTTTCTCAATATGGAAGGATCCTTGACGTTGTTGCCTTGAAGACCCCGAGGCTTCGAGGGCAAGCATGGGTTGCATTTAGTGAAGTGACTGCAGCTAGCAATGCTGTGCGGCAGATGCAAAACTTCCCATTCTATGATAAGCCTATGCGAATTCAATATGCCAAAACCAAATCAGATTGTGTTGCTAAAGCTGATGGAAGCTTTGTGCCAAGGGAGAAGAAGAAGAAGCAAGAGGAAAAAGCTGAGAGAAAGCGACGTACTGACGAAACACACCAGTCTGCGATGCCCAATGGAGCAACCGCTGAGAATGGAGGTTCAAATGCCACATTCCGTCATGCAAATCCAAGCGCTCCAGAAGCTACTCCAAACAACATACTATTTATTGAGAATTTGCCTCATGAAACTTCGAGTATGATGTTGCAAGTCCTCTTCCAACAATATCCTGGATTCAGGGAAGTCCGAATGATTGAAGCAAAGCCGGGTATTGCTTTTGTTGAGTTTGAAGATGATGTTCAATCCTCTATGGCGATGCAGGCTCTTCAGGGCTTTAAAATTGATCCCCAACATCCCATGGCCATCTCTTTTGCAAAGAAGTAA MLLGDIPPNQTIYIKNLNEKVKKEELKRSLYALFSQYGRILDVVALKTPRLRGQAWVAFSEVTAASNAVRQMQNFPFYDKPMRIQYAKTKSDCVAKADGSFVPREKKKKQEEKAERKRRTDETHQSAMPNGATAENGGSNATFRHANPSAPEATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPGIAFVEFEDDVQSSMAMQALQGFKIDPQHPMAISFAKK
BLAST of Cp4.1LG02g11120 vs. Swiss-Prot
Match: RU2B2_ARATH (U2 small nuclear ribonucleoprotein B'' 2 OS=Arabidopsis thaliana GN=At1g06960 PE=1 SV=1) HSP 1 Score: 345.5 bits (885), Expect = 4.5e-94 Identity = 178/232 (76.72%), Postives = 202/232 (87.07%), Query Frame = 1
BLAST of Cp4.1LG02g11120 vs. Swiss-Prot
Match: RU2B1_ARATH (U2 small nuclear ribonucleoprotein B'' OS=Arabidopsis thaliana GN=U2B'' PE=1 SV=1) HSP 1 Score: 329.3 bits (843), Expect = 3.3e-89 Identity = 170/235 (72.34%), Postives = 199/235 (84.68%), Query Frame = 1
BLAST of Cp4.1LG02g11120 vs. Swiss-Prot
Match: RU2B_ORYSI (U2 small nuclear ribonucleoprotein B'' OS=Oryza sativa subsp. indica GN=OsI_11177 PE=3 SV=1) HSP 1 Score: 319.3 bits (817), Expect = 3.4e-86 Identity = 171/233 (73.39%), Postives = 192/233 (82.40%), Query Frame = 1
BLAST of Cp4.1LG02g11120 vs. Swiss-Prot
Match: RU2B_ORYSJ (U2 small nuclear ribonucleoprotein B'' OS=Oryza sativa subsp. japonica GN=Os03g0298800 PE=2 SV=1) HSP 1 Score: 318.2 bits (814), Expect = 7.6e-86 Identity = 170/233 (72.96%), Postives = 192/233 (82.40%), Query Frame = 1
BLAST of Cp4.1LG02g11120 vs. Swiss-Prot
Match: RU1A_ARATH (U1 small nuclear ribonucleoprotein A OS=Arabidopsis thaliana GN=U1A PE=1 SV=1) HSP 1 Score: 253.1 bits (645), Expect = 3.0e-66 Identity = 141/239 (59.00%), Postives = 177/239 (74.06%), Query Frame = 1
BLAST of Cp4.1LG02g11120 vs. TrEMBL
Match: A0A0A0LPT7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G025950 PE=4 SV=1) HSP 1 Score: 435.6 bits (1119), Expect = 3.6e-119 Identity = 222/231 (96.10%), Postives = 226/231 (97.84%), Query Frame = 1
BLAST of Cp4.1LG02g11120 vs. TrEMBL
Match: D7SJN7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g07530 PE=4 SV=1) HSP 1 Score: 378.6 bits (971), Expect = 5.3e-102 Identity = 197/234 (84.19%), Postives = 210/234 (89.74%), Query Frame = 1
BLAST of Cp4.1LG02g11120 vs. TrEMBL
Match: A0A067DUK7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g026902mg PE=4 SV=1) HSP 1 Score: 374.8 bits (961), Expect = 7.6e-101 Identity = 194/232 (83.62%), Postives = 212/232 (91.38%), Query Frame = 1
BLAST of Cp4.1LG02g11120 vs. TrEMBL
Match: V4T1I4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002361mg PE=4 SV=1) HSP 1 Score: 372.1 bits (954), Expect = 5.0e-100 Identity = 192/232 (82.76%), Postives = 211/232 (90.95%), Query Frame = 1
BLAST of Cp4.1LG02g11120 vs. TrEMBL
Match: A0A0D2MP29_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G150900 PE=4 SV=1) HSP 1 Score: 367.1 bits (941), Expect = 1.6e-98 Identity = 187/232 (80.60%), Postives = 205/232 (88.36%), Query Frame = 1
BLAST of Cp4.1LG02g11120 vs. TAIR10
Match: AT1G06960.1 (AT1G06960.1 RNA-binding (RRM/RBD/RNP motifs) family protein) HSP 1 Score: 345.5 bits (885), Expect = 2.5e-95 Identity = 178/232 (76.72%), Postives = 202/232 (87.07%), Query Frame = 1
BLAST of Cp4.1LG02g11120 vs. TAIR10
Match: AT2G30260.1 (AT2G30260.1 U2 small nuclear ribonucleoprotein B) HSP 1 Score: 329.3 bits (843), Expect = 1.9e-90 Identity = 170/235 (72.34%), Postives = 199/235 (84.68%), Query Frame = 1
BLAST of Cp4.1LG02g11120 vs. TAIR10
Match: AT2G47580.1 (AT2G47580.1 spliceosomal protein U1A) HSP 1 Score: 253.1 bits (645), Expect = 1.7e-67 Identity = 141/239 (59.00%), Postives = 177/239 (74.06%), Query Frame = 1
BLAST of Cp4.1LG02g11120 vs. NCBI nr
Match: gi|449439191|ref|XP_004137370.1| (PREDICTED: U2 small nuclear ribonucleoprotein B'' 2-like [Cucumis sativus]) HSP 1 Score: 435.6 bits (1119), Expect = 5.2e-119 Identity = 222/231 (96.10%), Postives = 226/231 (97.84%), Query Frame = 1
BLAST of Cp4.1LG02g11120 vs. NCBI nr
Match: gi|659114937|ref|XP_008457301.1| (PREDICTED: U2 small nuclear ribonucleoprotein B'' 2-like [Cucumis melo]) HSP 1 Score: 433.0 bits (1112), Expect = 3.4e-118 Identity = 221/231 (95.67%), Postives = 225/231 (97.40%), Query Frame = 1
BLAST of Cp4.1LG02g11120 vs. NCBI nr
Match: gi|1009116350|ref|XP_015874724.1| (PREDICTED: U2 small nuclear ribonucleoprotein B'' 2-like [Ziziphus jujuba]) HSP 1 Score: 391.0 bits (1003), Expect = 1.5e-105 Identity = 200/232 (86.21%), Postives = 220/232 (94.83%), Query Frame = 1
BLAST of Cp4.1LG02g11120 vs. NCBI nr
Match: gi|225434417|ref|XP_002271864.1| (PREDICTED: U2 small nuclear ribonucleoprotein B'' 2 [Vitis vinifera]) HSP 1 Score: 378.6 bits (971), Expect = 7.6e-102 Identity = 197/234 (84.19%), Postives = 210/234 (89.74%), Query Frame = 1
BLAST of Cp4.1LG02g11120 vs. NCBI nr
Match: gi|568827584|ref|XP_006468132.1| (PREDICTED: U2 small nuclear ribonucleoprotein B'' 2 [Citrus sinensis]) HSP 1 Score: 374.8 bits (961), Expect = 1.1e-100 Identity = 194/232 (83.62%), Postives = 212/232 (91.38%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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