Cp4.1LG02g01050 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG02g01050
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionTranslation factor SUI1
LocationCp4.1LG02 : 4921219 .. 4923871 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTGTGGGTGTTCGAGTTTTGATCCAAACAAGGTTGATGGTTGAAATAGACGTCCAAATCCCATCCGCATACGATCCATTCGCAGACGCCAAGGACTCTGATGCCCCAGGAGGCAAAGAGTATGTTCATATCCGCGTGCAGCAGAGGAATGGCAAGAAGTGCTTGACAACAGTCCAGGGTCTGAAGAAGGATTTCAGCTACGAGAAGATCCTCAAAGACGTGAAGAAGGAGTTCTGTTGTAATGGTAACGTCGTCCAAGACAAAGAATTGGGGAAGATAATTCAGCTTCAAGGCGATCAGCGCAAGAACGTGTCTCAGTTCCTGGTTCAGGCTGGGATTGTGAAGAAGNTAACTTACAACATAATAGTAAGAAAGTCCTTTTCGTTAAAGTAAATTAATGTTTTATAAATTTTAATAGTAGGTTTTTCAGTAAATGAATATTAAATTATTGCTACTAAATTACACGTATTATTAAAATATATATATTGTTTGCATATTATTTATTGGGTATGGTAGGTATTTTCAAATAAATAATTTTAAAAAATATATATTTCGGATCATAGATATCTAAATTTTTTCGAGTAATCTTAAATTAATTATTTTTCTTAATTTACAGTTAATTTCTTTTAAAAATATTAATAGTGAGTATTATTTAAAATAAAAAAAAAAGTTTAATAATAATTAATTTTAAGATTTATTAAAAATGATTCATGTTAAATTGGGGCCCACCCAGAACCCCCGGCTTGGCCCACTTGGACCGGACCGTCCTTTTCTCCAATCGGATCCCGGTAGCGTTAGCGTTGAATGAACGCGTCTATATTCACCGCACTTAAACCATATTTTAAAAGAGACTTATTTTATTGTACACGTCAGCGAAGATCTGACCGTCCATTACTAATCTTGGCCGTCCACGTCATCTCCCTACATGTTCGAGAACAATCCTGACCCCATTCGGATGCGAATTCGTGATGGAAACAAACGGATTCTTGCCGCTTTCCCCAAAATCTCTATAAATAATCCCTATACCGCTCAGCGTTGGTCTCATCATTCGTTGTCCGTTCGCTGTTCTTCACTACCTTCTCGTAAGTCTTTGATCCCTTCTGAATAGTTGAATCAGTATTCTGATTGTTAGCTCTACTTTAACTTGTGTTCCTGTTGTTGTTGCTGGATTTATCTTTTTGCTACTTTGATTTGTGGTTTATGCTCATTTGACTTGATGATTTGATGATCGTCGTTGGGAGATTTCTGTTTAGATTGGATTTTAGTTTGTATCGGCCGGATTCTCGTCTTGCTTGATACGATTCTGTTGTTGCGTTCTTTCGTGAAGTCGTGGATGATCTACGGTTTTTCTTTCTGGATTCGTTGTTTTGTTGTTGGAGTATTTGGTTTGATGATCGAGGAGATTCATCGTTCTGGATTCTTGTCCTGTTGTTCTCTACATGTTTAGATTGGGTCTTAGTTTGTATCGGCCGGATTCTCGTCGTGCTTGTTTAGATTCTGTTGTTCGGTTCGTTTATTTAAGTCATGGATGATCTAGGGTTGTTCTTTCTGTGTTCGTTGTTTTGTTGTTTGAGCGTTAGGGTTTATGAGTATTTGGTCAGATGATCGTCAGGAGATTCATCGTTCTGGATTCTTGTCCTGTAGTTCTCTTCATGTTTAGATTGGGTTTTAGTTTGTATCGGCCGGATTCTCGTCTTGCTTGGTAAGATTCTGTTGTTCGGTTCGTTTATTGAAGTCATGGATGATCTAGGGTTTTTCTTTCTGGATTCGTTGTTTTGTTGTTTGAGCTTTAGGTTTTATGAGTATATGGTTAGGTGATCGTCAGAAGATTCATCGTTGTTCTCTTCATTTGTTCAAGTGTTTTCTTATACGAAAAACCGTTTAATCCGGCCATGGATGAACAGGGGATTTGTTGTTGTTCATTGGTATTGATTGTATCTGATCCGCTTTGGGGTTTCTGTTGATTGGAAGCCATTGATTGTGGGAGTTGGCGTTTAAAGATAAGCCAAGGCTTACTTCTATCCATATTGATATTGATATCTATGATGTGTTCCAGATTGTGGGTGTTCGAGTTTTGATCCAAACAAGGTTGATGGTTGAAATAGACGTCCAAATCCCATCCGCATACGATCCATTCGCAGACGCCAAGGACTCTGATGCCCCAGGAGGCAAAGAGTATGTTCATATCCGCGTGCAGCAGAGGAATGGCAAGAAGTGCTTGACAACAGTCCAGGGTCTGAAGAAGGATTTCAGCTACGAGAAGATCCTCAAAGACGTGAAGAAGGAGTTCTGTTGTAATGGTAACGTCGTCCAAGACAAAGAATTGGGGAAGATAATTCAGCTTCAAGGCGATCAGCGCAAGAACGTGTCTCAGTTCCTGGTTCAGGCTGGGATTGTGAAGAAGGATCAGATCAAAATCCATGGATTTTAAGCAACTTGTTTTATAGTTCATCGAATTGAATCTGTTTCTGTGTTTTCTTTTGAATGGATCTTGTGATGGCTGTCTGTGATGACGACTTGTTAGCAATAAAATGTTTGATTCTGGGTAACTTTTGTGGTCTTTCATGTTCATAGCAGGATGTTTCAAGCTTTTAACCTCTCATAAGATTGTTTTAAATCATGTTCTTGTGGGAGTTTCAAACCTTTAGCTTCA

mRNA sequence

ATTGTGGGTGTTCGAGTTTTGATCCAAACAAGGTTGATGGTTGAAATAGACGTCCAAATCCCATCCGCATACGATCCATTCGCAGACGCCAAGGACTCTGATGCCCCAGGAGGCAAAGAGTATGTTCATATCCGCGTGCAGCAGAGGAATGGCAAGAAGTGCTTGACAACAGTCCAGGGTCTGAAGAAGGATTTCAGCTACGAGAAGATCCTCAAAGACGTGAAGAAGGAGTTCTGTTGTAATGGTAACGTCGTCCAAGACAAAGAATTGGGGAAGATAATTCAGCTTCAAGGCGATCAGCGCAAGAACGTGTCTCAGTTCCTGGTTCAGGCTGGGATTGTGAAGAAGNTAACTTACAACATAATAATTGTGGGTGTTCGAGTTTTGATCCAAACAAGGTTGATGGTTGAAATAGACGTCCAAATCCCATCCGCATACGATCCATTCGCAGACGCCAAGGACTCTGATGCCCCAGGAGGCAAAGAGTATGTTCATATCCGCGTGCAGCAGAGGAATGGCAAGAAGTGCTTGACAACAGTCCAGGGTCTGAAGAAGGATTTCAGCTACGAGAAGATCCTCAAAGACGTGAAGAAGGAGTTCTGTTGTAATGGTAACGTCGTCCAAGACAAAGAATTGGGGAAGATAATTCAGCTTCAAGGCGATCAGCGCAAGAACGTGTCTCAGTTCCTGGTTCAGGCTGGGATTGTGAAGAAGGATCAGATCAAAATCCATGGATTTTAAGCAACTTGTTTTATAGTTCATCGAATTGAATCTGTTTCTGTGTTTTCTTTTGAATGGATCTTGTGATGGCTGTCTGTGATGACGACTTGTTAGCAATAAAATGTTTGATTCTGGGTAACTTTTGTGGTCTTTCATGTTCATAGCAGGATGTTTCAAGCTTTTAACCTCTCATAAGATTGTTTTAAATCATGTTCTTGTGGGAGTTTCAAACCTTTAGCTTCA

Coding sequence (CDS)

ATTGTGGGTGTTCGAGTTTTGATCCAAACAAGGTTGATGGTTGAAATAGACGTCCAAATCCCATCCGCATACGATCCATTCGCAGACGCCAAGGACTCTGATGCCCCAGGAGGCAAAGAGTATGTTCATATCCGCGTGCAGCAGAGGAATGGCAAGAAGTGCTTGACAACAGTCCAGGGTCTGAAGAAGGATTTCAGCTACGAGAAGATCCTCAAAGACGTGAAGAAGGAGTTCTGTTGTAATGGTAACGTCGTCCAAGACAAAGAATTGGGGAAGATAATTCAGCTTCAAGGCGATCAGCGCAAGAACGTGTCTCAGTTCCTGGTTCAGGCTGGGATTGTGAAGAAGNTAACTTACAACATAATAATTGTGGGTGTTCGAGTTTTGATCCAAACAAGGTTGATGGTTGAAATAGACGTCCAAATCCCATCCGCATACGATCCATTCGCAGACGCCAAGGACTCTGATGCCCCAGGAGGCAAAGAGTATGTTCATATCCGCGTGCAGCAGAGGAATGGCAAGAAGTGCTTGACAACAGTCCAGGGTCTGAAGAAGGATTTCAGCTACGAGAAGATCCTCAAAGACGTGAAGAAGGAGTTCTGTTGTAATGGTAACGTCGTCCAAGACAAAGAATTGGGGAAGATAATTCAGCTTCAAGGCGATCAGCGCAAGAACGTGTCTCAGTTCCTGGTTCAGGCTGGGATTGTGAAGAAGGATCAGATCAAAATCCATGGATTTTAA

Protein sequence

IVGVRVLIQTRLMVEIDVQIPSAYDPFADAKDSDAPGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGIVKKXTYNIIIVGVRVLIQTRLMVEIDVQIPSAYDPFADAKDSDAPGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGIVKKDQIKIHGF
Homology
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BLAST of Cp4.1LG02g01050 vs. Swiss-Prot
Match: SUI12_ARATH (Protein translation factor SUI1 homolog 2 OS=Arabidopsis thaliana GN=At1g54290 PE=3 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 4.5e-44
Identity = 86/113 (76.11%), Postives = 100/113 (88.50%), Query Frame = 1 

Query: 135 MVEIDVQIPSAYDPFADAKDSDAPGG-KEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKIL 194
           M +++VQ+P+A+DPFADA   D+  G KEYVHIRVQQRNG+K LTTVQGLKK++SY KIL
Sbjct: 1   MSDLEVQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYSKIL 60

Query: 195 KDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGIVKKDQIKIHGF 247
           KD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLVQAG+VKKD IKIHGF
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113

[Close]
BLAST of Cp4.1LG02g01050 vs. Swiss-Prot
Match: SUI11_ARATH (Protein translation factor SUI1 homolog 1 OS=Arabidopsis thaliana GN=At4g27130 PE=1 SV=2)

HSP 1 Score: 179.5 bits (454), Expect = 4.5e-44
Identity = 87/113 (76.99%), Postives = 99/113 (87.61%), Query Frame = 1 

Query: 135 MVEIDVQIPSAYDPFADAKDSDAPGG-KEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKIL 194
           M E+D Q+P+A+DPFADA   D+  G KEYVHIRVQQRNG+K LTTVQGLKK++SY KIL
Sbjct: 1   MSELDSQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKIL 60

Query: 195 KDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGIVKKDQIKIHGF 247
           KD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLVQAG+VKKD IKIHGF
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113

[Close]
BLAST of Cp4.1LG02g01050 vs. Swiss-Prot
Match: SUI1_ORYSI (Protein translation factor SUI1 homolog OS=Oryza sativa subsp. indica GN=GOS2 PE=2 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 7.7e-44
Identity = 85/115 (73.91%), Postives = 100/115 (86.96%), Query Frame = 1 

Query: 135 MVEIDVQIPSAYDPFADAKDSD---APGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEK 194
           M ++D+QIP+A+DPFA+A   D   A G K+YVH+R+QQRNG+K LTTVQGLKK+FSY K
Sbjct: 1   MSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNK 60

Query: 195 ILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGIVKKDQIKIHGF 247
           ILKD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLVQAGIVKK+ IKIHGF
Sbjct: 61  ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115

[Close]
BLAST of Cp4.1LG02g01050 vs. Swiss-Prot
Match: SUI1_MAIZE (Protein translation factor SUI1 homolog OS=Zea mays GN=TIF PE=3 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 7.7e-44
Identity = 85/115 (73.91%), Postives = 100/115 (86.96%), Query Frame = 1 

Query: 135 MVEIDVQIPSAYDPFADAKDSD---APGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEK 194
           M ++D+QIP+A+DPFA+A   D   A G K+YVH+R+QQRNG+K LTTVQGLKK+FSY K
Sbjct: 1   MSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYSK 60

Query: 195 ILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGIVKKDQIKIHGF 247
           ILKD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLVQAGIVKK+ IKIHGF
Sbjct: 61  ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115

[Close]
BLAST of Cp4.1LG02g01050 vs. Swiss-Prot
Match: SUI1_ORYSJ (Protein translation factor SUI1 homolog OS=Oryza sativa subsp. japonica GN=GOS2 PE=3 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 7.7e-44
Identity = 85/115 (73.91%), Postives = 100/115 (86.96%), Query Frame = 1 

Query: 135 MVEIDVQIPSAYDPFADAKDSD---APGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEK 194
           M ++D+QIP+A+DPFA+A   D   A G K+YVH+R+QQRNG+K LTTVQGLKK+FSY K
Sbjct: 1   MSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNK 60

Query: 195 ILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGIVKKDQIKIHGF 247
           ILKD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLVQAGIVKK+ IKIHGF
Sbjct: 61  ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115

[Close]
BLAST of Cp4.1LG02g01050 vs. TrEMBL
Match: A0A0A0K771_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G209580 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 7.5e-54
Identity = 106/112 (94.64%), Postives = 110/112 (98.21%), Query Frame = 1 

Query: 135 MVEIDVQIPSAYDPFADAKDSDAPGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILK 194
           MVE+D QIPSA+DPFADAKDSDAPG KEYVHIRVQQRNGKKCLTTVQGLKK+FSYEKILK
Sbjct: 1   MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60

Query: 195 DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGIVKKDQIKIHGF 247
           DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAG+VKKDQIKIHGF
Sbjct: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

[Close]
BLAST of Cp4.1LG02g01050 vs. TrEMBL
Match: A0A0A0L7M8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G077610 PE=4 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 4.8e-53
Identity = 103/112 (91.96%), Postives = 111/112 (99.11%), Query Frame = 1 

Query: 135 MVEIDVQIPSAYDPFADAKDSDAPGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILK 194
           MV++DVQIPSA+DPFADAKDSDAPG KEYVHIRVQQRNGKKCLTTVQGLKK+FSY+KILK
Sbjct: 1   MVDLDVQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK 60

Query: 195 DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGIVKKDQIKIHGF 247
           D+KK+FCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAG+VKKDQIKIHGF
Sbjct: 61  DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

[Close]
BLAST of Cp4.1LG02g01050 vs. TrEMBL
Match: M5X305_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013625mg PE=4 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 2.0e-51
Identity = 101/112 (90.18%), Postives = 109/112 (97.32%), Query Frame = 1 

Query: 135 MVEIDVQIPSAYDPFADAKDSDAPGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILK 194
           MVE+DVQIP+A+DPFA+AKD+DAPG KEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILK
Sbjct: 1   MVELDVQIPTAFDPFAEAKDADAPGAKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILK 60

Query: 195 DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGIVKKDQIKIHGF 247
           D+KKEFCCNGNVVQDKELGKIIQLQGDQRKNV QFLVQA IVKK+QIK+HGF
Sbjct: 61  DLKKEFCCNGNVVQDKELGKIIQLQGDQRKNVLQFLVQAKIVKKEQIKMHGF 112

[Close]
BLAST of Cp4.1LG02g01050 vs. TrEMBL
Match: G7IY05_MEDTR (Eukaryotic translation initiation factor SUI1 OS=Medicago truncatula GN=MTR_3g051950 PE=2 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 5.9e-51
Identity = 99/112 (88.39%), Postives = 109/112 (97.32%), Query Frame = 1 

Query: 135 MVEIDVQIPSAYDPFADAKDSDAPGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILK 194
           MVE+D+QIP+A+DPFADA +SDAPGGKEYVHIR+QQRNGKK LTTVQGLKKD+SYEKILK
Sbjct: 1   MVELDIQIPTAFDPFADAIESDAPGGKEYVHIRIQQRNGKKSLTTVQGLKKDYSYEKILK 60

Query: 195 DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGIVKKDQIKIHGF 247
           D+KKEFCCNGNVVQDKELGKIIQLQGDQRK VSQFLVQAG+V+KDQIKIHGF
Sbjct: 61  DLKKEFCCNGNVVQDKELGKIIQLQGDQRKKVSQFLVQAGLVRKDQIKIHGF 112

[Close]
BLAST of Cp4.1LG02g01050 vs. TrEMBL
Match: B7FMJ6_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 1.0e-50
Identity = 99/112 (88.39%), Postives = 109/112 (97.32%), Query Frame = 1 

Query: 135 MVEIDVQIPSAYDPFADAKDSDAPGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILK 194
           MVE+D+QIP+A+DPFADA +SDAPGGKEYVHIR+QQRNGKK LTTVQGLKKD+SYEKILK
Sbjct: 1   MVELDIQIPTAFDPFADAIESDAPGGKEYVHIRIQQRNGKKGLTTVQGLKKDYSYEKILK 60

Query: 195 DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGIVKKDQIKIHGF 247
           D+KKEFCCNGNVVQDKELGKIIQLQGDQRK VSQFLVQAG+V+KDQIKIHGF
Sbjct: 61  DLKKEFCCNGNVVQDKELGKIIQLQGDQRKKVSQFLVQAGLVRKDQIKIHGF 112

[Close]
BLAST of Cp4.1LG02g01050 vs. TAIR10
Match: AT5G54940.1 (AT5G54940.1 Translation initiation factor SUI1 family protein)

HSP 1 Score: 203.8 bits (517), Expect = 1.3e-52
Identity = 96/112 (85.71%), Postives = 106/112 (94.64%), Query Frame = 1 

Query: 135 MVEIDVQIPSAYDPFADAKDSDAPGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILK 194
           MVE+D+QIPSAYDPFA+AKDSDAPG KE +HIR+QQRNGKK LTTVQGLKK++SYE+ILK
Sbjct: 1   MVELDIQIPSAYDPFAEAKDSDAPGAKENIHIRIQQRNGKKSLTTVQGLKKEYSYERILK 60

Query: 195 DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGIVKKDQIKIHGF 247
           D+KK+FCCNGNVVQDKELGKIIQLQGDQRK VSQFLVQ GI KKDQIKIHGF
Sbjct: 61  DLKKDFCCNGNVVQDKELGKIIQLQGDQRKKVSQFLVQTGIAKKDQIKIHGF 112

[Close]
BLAST of Cp4.1LG02g01050 vs. TAIR10
Match: AT1G54290.1 (AT1G54290.1 Translation initiation factor SUI1 family protein)

HSP 1 Score: 179.5 bits (454), Expect = 2.5e-45
Identity = 86/113 (76.11%), Postives = 100/113 (88.50%), Query Frame = 1 

Query: 135 MVEIDVQIPSAYDPFADAKDSDAPGG-KEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKIL 194
           M +++VQ+P+A+DPFADA   D+  G KEYVHIRVQQRNG+K LTTVQGLKK++SY KIL
Sbjct: 1   MSDLEVQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYSKIL 60

Query: 195 KDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGIVKKDQIKIHGF 247
           KD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLVQAG+VKKD IKIHGF
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113

[Close]
BLAST of Cp4.1LG02g01050 vs. TAIR10
Match: AT4G27130.1 (AT4G27130.1 Translation initiation factor SUI1 family protein)

HSP 1 Score: 179.5 bits (454), Expect = 2.5e-45
Identity = 87/113 (76.99%), Postives = 99/113 (87.61%), Query Frame = 1 

Query: 135 MVEIDVQIPSAYDPFADAKDSDAPGG-KEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKIL 194
           M E+D Q+P+A+DPFADA   D+  G KEYVHIRVQQRNG+K LTTVQGLKK++SY KIL
Sbjct: 1   MSELDSQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKIL 60

Query: 195 KDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGIVKKDQIKIHGF 247
           KD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLVQAG+VKKD IKIHGF
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113

[Close]
BLAST of Cp4.1LG02g01050 vs. TAIR10
Match: AT5G54760.1 (AT5G54760.1 Translation initiation factor SUI1 family protein)

HSP 1 Score: 179.1 bits (453), Expect = 3.3e-45
Identity = 87/113 (76.99%), Postives = 99/113 (87.61%), Query Frame = 1 

Query: 135 MVEIDVQIPSAYDPFADAKDSDAPGG-KEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKIL 194
           M E+D Q+P+A+DPFADA   D+  G KEYVHIRVQQRNG+K LTTVQGLKK++SY KIL
Sbjct: 1   MSELDSQVPTAFDPFADANVEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKIL 60

Query: 195 KDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGIVKKDQIKIHGF 247
           KD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLVQAG+VKKD IKIHGF
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113

[Close]
BLAST of Cp4.1LG02g01050 vs. NCBI nr
Match: gi|449444048|ref|XP_004139787.1| (PREDICTED: protein translation factor SUI1 homolog 1-like [Cucumis sativus])

HSP 1 Score: 218.8 bits (556), Expect = 1.1e-53
Identity = 106/112 (94.64%), Postives = 110/112 (98.21%), Query Frame = 1 

Query: 135 MVEIDVQIPSAYDPFADAKDSDAPGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILK 194
           MVE+D QIPSA+DPFADAKDSDAPG KEYVHIRVQQRNGKKCLTTVQGLKK+FSYEKILK
Sbjct: 1   MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60

Query: 195 DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGIVKKDQIKIHGF 247
           DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAG+VKKDQIKIHGF
Sbjct: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

[Close]
BLAST of Cp4.1LG02g01050 vs. NCBI nr
Match: gi|659126887|ref|XP_008463414.1| (PREDICTED: protein translation factor SUI1 homolog 2 [Cucumis melo])

HSP 1 Score: 216.1 bits (549), Expect = 6.9e-53
Identity = 103/112 (91.96%), Postives = 111/112 (99.11%), Query Frame = 1 

Query: 135 MVEIDVQIPSAYDPFADAKDSDAPGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILK 194
           MV++DVQIPSA+DPFADAKDSDAPG KEYVHIRVQQRNGKKCLTTVQGLKK+FSY+KILK
Sbjct: 1   MVDLDVQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK 60

Query: 195 DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGIVKKDQIKIHGF 247
           D+KK+FCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAG+VKKDQIKIHGF
Sbjct: 61  DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

[Close]
BLAST of Cp4.1LG02g01050 vs. NCBI nr
Match: gi|1009111199|ref|XP_015899773.1| (PREDICTED: protein translation factor SUI1 homolog [Ziziphus jujuba])

HSP 1 Score: 213.4 bits (542), Expect = 4.5e-52
Identity = 102/112 (91.07%), Postives = 109/112 (97.32%), Query Frame = 1 

Query: 135 MVEIDVQIPSAYDPFADAKDSDAPGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILK 194
           MVE+DVQIP+ +DPFA+AKDSDAPG KEYVHIRVQQRNGKKCLTTVQGL+KDFSYE+ILK
Sbjct: 1   MVELDVQIPTTFDPFAEAKDSDAPGAKEYVHIRVQQRNGKKCLTTVQGLRKDFSYERILK 60

Query: 195 DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGIVKKDQIKIHGF 247
           D+KKEFCCNGNVVQDK LGKIIQLQGDQRKNVSQFLVQAGIVKKDQIKIHGF
Sbjct: 61  DLKKEFCCNGNVVQDKVLGKIIQLQGDQRKNVSQFLVQAGIVKKDQIKIHGF 112

[Close]
BLAST of Cp4.1LG02g01050 vs. NCBI nr
Match: gi|595877910|ref|XP_007212250.1| (hypothetical protein PRUPE_ppa013625mg [Prunus persica])

HSP 1 Score: 210.7 bits (535), Expect = 2.9e-51
Identity = 101/112 (90.18%), Postives = 109/112 (97.32%), Query Frame = 1 

Query: 135 MVEIDVQIPSAYDPFADAKDSDAPGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILK 194
           MVE+DVQIP+A+DPFA+AKD+DAPG KEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILK
Sbjct: 1   MVELDVQIPTAFDPFAEAKDADAPGAKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILK 60

Query: 195 DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGIVKKDQIKIHGF 247
           D+KKEFCCNGNVVQDKELGKIIQLQGDQRKNV QFLVQA IVKK+QIK+HGF
Sbjct: 61  DLKKEFCCNGNVVQDKELGKIIQLQGDQRKNVLQFLVQAKIVKKEQIKMHGF 112

[Close]
BLAST of Cp4.1LG02g01050 vs. NCBI nr
Match: gi|658047181|ref|XP_008359266.1| (PREDICTED: protein translation factor SUI1 homolog [Malus domestica])

HSP 1 Score: 209.9 bits (533), Expect = 5.0e-51
Identity = 101/112 (90.18%), Postives = 108/112 (96.43%), Query Frame = 1 

Query: 135 MVEIDVQIPSAYDPFADAKDSDAPGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILK 194
           MVE+DVQIP+A+DPF++AKD+DAPG KEYVHIRVQQRNGKKCLTTVQGLKKDFSY KILK
Sbjct: 1   MVELDVQIPTAFDPFSEAKDADAPGAKEYVHIRVQQRNGKKCLTTVQGLKKDFSYXKILK 60

Query: 195 DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGIVKKDQIKIHGF 247
           D+KKEFCCNGNVVQDKELGKIIQLQGDQRKNV QFLVQA IVKKDQIKIHGF
Sbjct: 61  DLKKEFCCNGNVVQDKELGKIIQLQGDQRKNVLQFLVQAKIVKKDQIKIHGF 112

The following BLAST results are available for this feature:
BLAST of Cp4.1LG02g01050 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SUI12_ARATH4.5e-4476.11Protein translation factor SUI1 homolog 2 OS=Arabidopsis thaliana GN=At1g54290 P... [more]
SUI11_ARATH4.5e-4476.99Protein translation factor SUI1 homolog 1 OS=Arabidopsis thaliana GN=At4g27130 P... [more]
SUI1_ORYSI7.7e-4473.91Protein translation factor SUI1 homolog OS=Oryza sativa subsp. indica GN=GOS2 PE... [more]
SUI1_MAIZE7.7e-4473.91Protein translation factor SUI1 homolog OS=Zea mays GN=TIF PE=3 SV=1[more]
SUI1_ORYSJ7.7e-4473.91Protein translation factor SUI1 homolog OS=Oryza sativa subsp. japonica GN=GOS2 ... [more]
BLAST of Cp4.1LG02g01050 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K771_CUCSA7.5e-5494.64Uncharacterized protein OS=Cucumis sativus GN=Csa_7G209580 PE=4 SV=1[more]
A0A0A0L7M8_CUCSA4.8e-5391.96Uncharacterized protein OS=Cucumis sativus GN=Csa_3G077610 PE=4 SV=1[more]
M5X305_PRUPE2.0e-5190.18Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013625mg PE=4 SV=1[more]
G7IY05_MEDTR5.9e-5188.39Eukaryotic translation initiation factor SUI1 OS=Medicago truncatula GN=MTR_3g05... [more]
B7FMJ6_MEDTR1.0e-5088.39Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1[more]
BLAST of Cp4.1LG02g01050 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G54940.11.3e-5285.71 Translation initiation factor SUI1 family protein[more]
AT1G54290.12.5e-4576.11 Translation initiation factor SUI1 family protein[more]
AT4G27130.12.5e-4576.99 Translation initiation factor SUI1 family protein[more]
AT5G54760.13.3e-4576.99 Translation initiation factor SUI1 family protein[more]
BLAST of Cp4.1LG02g01050 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449444048|ref|XP_004139787.1|1.1e-5394.64PREDICTED: protein translation factor SUI1 homolog 1-like [Cucumis sativus][more]
gi|659126887|ref|XP_008463414.1|6.9e-5391.96PREDICTED: protein translation factor SUI1 homolog 2 [Cucumis melo][more]
gi|1009111199|ref|XP_015899773.1|4.5e-5291.07PREDICTED: protein translation factor SUI1 homolog [Ziziphus jujuba][more]
gi|595877910|ref|XP_007212250.1|2.9e-5190.18hypothetical protein PRUPE_ppa013625mg [Prunus persica][more]
gi|658047181|ref|XP_008359266.1|5.0e-5190.18PREDICTED: protein translation factor SUI1 homolog [Malus domestica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006413translational initiation
Vocabulary: Molecular Function
TermDefinition
GO:0003743translation initiation factor activity
Vocabulary: INTERPRO
TermDefinition
IPR005874SUI1_euk
IPR001950SUI1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006446 regulation of translational initiation
biological_process GO:0051225 spindle assembly
biological_process GO:0006413 translational initiation
cellular_component GO:0005840 ribosome
cellular_component GO:0070652 HAUS complex
cellular_component GO:0005575 cellular_component
molecular_function GO:0003743 translation initiation factor activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG02g01050.1Cp4.1LG02g01050.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001950Translation initiation factor SUI1GENE3DG3DSA:3.30.780.10coord: 7..120
score: 2.7E-42coord: 129..246
score: 2.1
IPR001950Translation initiation factor SUI1PFAMPF01253SUI1coord: 39..113
score: 5.8E-23coord: 161..235
score: 5.8
IPR001950Translation initiation factor SUI1PROFILEPS50296SUI1coord: 164..234
score: 22.878coord: 42..112
score: 22
IPR001950Translation initiation factor SUI1unknownSSF55159eIF1-likecoord: 14..117
score: 3.79E-30coord: 136..246
score: 1.57
IPR005874Eukaryotic translation initiation factor SUI1TIGRFAMsTIGR01160TIGR01160coord: 17..119
score: 1.9E-45coord: 139..246
score: 2.3
NoneNo IPR availablePANTHERPTHR10388EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1coord: 119..246
score: 2.3
NoneNo IPR availablePANTHERPTHR10388:SF16SUBFAMILY NOT NAMEDcoord: 119..246
score: 2.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG02g01050Cucsa.007240Cucumber (Gy14) v1cgycpeB0235
Cp4.1LG02g01050CmaCh09G009550Cucurbita maxima (Rimu)cmacpeB046
Cp4.1LG02g01050CmaCh01G011290Cucurbita maxima (Rimu)cmacpeB490
Cp4.1LG02g01050CmoCh01G011800Cucurbita moschata (Rifu)cmocpeB448
Cp4.1LG02g01050CmoCh09G009530Cucurbita moschata (Rifu)cmocpeB021
Cp4.1LG02g01050Cla016325Watermelon (97103) v1cpewmB533
Cp4.1LG02g01050Csa7G209580Cucumber (Chinese Long) v2cpecuB587
Cp4.1LG02g01050MELO3C013163Melon (DHL92) v3.5.1cpemeB503
Cp4.1LG02g01050ClCG09G010810Watermelon (Charleston Gray)cpewcgB480
Cp4.1LG02g01050CSPI07G09790Wild cucumber (PI 183967)cpecpiB587
Cp4.1LG02g01050Lsi02G019030Bottle gourd (USVL1VR-Ls)cpelsiB445
Cp4.1LG02g01050MELO3C013163.2Melon (DHL92) v3.6.1cpemedB595
Cp4.1LG02g01050CsaV3_7G021830Cucumber (Chinese Long) v3cpecucB0727
Cp4.1LG02g01050Bhi09G001377Wax gourdcpewgoB0714
Cp4.1LG02g01050CsGy7G009290Cucumber (Gy14) v2cgybcpeB945
Cp4.1LG02g01050Carg05625Silver-seed gourdcarcpeB1420
Cp4.1LG02g01050Carg12823Silver-seed gourdcarcpeB1254
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG02g01050Cp4.1LG06g08880Cucurbita pepo (Zucchini)cpecpeB460
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG02g01050Cucumber (Chinese Long) v3cpecucB0683
Cp4.1LG02g01050Cucurbita pepo (Zucchini)cpecpeB050
Cp4.1LG02g01050Cucurbita pepo (Zucchini)cpecpeB240
Cp4.1LG02g01050Cucurbita pepo (Zucchini)cpecpeB437
Cp4.1LG02g01050Cucurbita moschata (Rifu)cmocpeB409
Cp4.1LG02g01050Watermelon (Charleston Gray)cpewcgB506
Cp4.1LG02g01050Watermelon (97103) v1cpewmB553
Cp4.1LG02g01050Cucumber (Gy14) v2cgybcpeB228
Cp4.1LG02g01050Silver-seed gourdcarcpeB0046