Cucsa.007240 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAGCTAGGGTATATTTTATCTTTTAAAAGGTAGGGCTGCAGCAGCCACAAGAGTCTCTTAAATCGAGAGTCTCTTAAATCCAGAGTCTCTTCTTAAATCCAGAGTCTCTTAAATCCAGGAGGCCGGTATGTTCTTTCCTTGACTTTCCTTGATTTTCCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTCTACCAAGGAGATTTGATGTGAAAGTTTCTACAATTGAAGAGACCCATGATATTGAGTGATTAAAATTAGATGAATTATTGGGTTTGATAAACCTTCTGATGATAATATAAATGATTTCGTAGCTATGCTTAAAAAAACATTTCCAAAATAACTTTTTCAATAGTAGAAGAGACAATGATAGAACTGCTAGTAAAATAGACAGATAATTTAAGGGCAAAGAATATGAAGGATAATGTGGCCATCATCAAGTTGAATGCCCAAACTTCTTAAGAAGACAAAAGAAAAGTCTTATAACAACTCTATCAGATTCCAACAGTAGTGAAGATGATAATAATTGAGCTTTTATCAATAGTATAAAAATTGATAATGAACCAGAATCAACAAAATAAAATAACATGACTTAGAATCAACTTCATCAGTAGGTAGACTTATCAATTCTTAAACTTCAGAAGGACAGAGTATAAGAATTGTTGGAAGACAATCATTGTTTATTGACCCTCATCTCAACATTAAAACAAGAACTGAAAAATACAAAAGTTGAATATGACAACATCCCCAAGTCTGTCAAAATGCTCAATTCTGGTACACAAAATCTAAATCAAATTCTTGAAAATATTATTGGCAGAATGAGCTTTAGGATTTTCGTCTGATTTAAACGAATGCACTTCAGGACATGTAACCAATAGAGCTAGAGGAAAAATTGTTTCAAAAAGGCAATATACTTAAACCAAATCTCTCAAGTCTACATGAAGTTAAATTAGTTGAAGGCCTTGCAGCTAATTTAATCAGCATAATTTAAAGGATACACTCAAGGAGGAACATATAAAACTCTATTTATAAACAAATCTGATAAAGACTTCTTAGTTGCTCAGTTTTGTGTTGATGACATAATCTTTGGTGGGTTTCATGAAGAAATAGTAAAAAATTTCATTCATCACATGCAACCAGAATTTGAACTAAGCATAGTTGGAGAATTAACATTCTTCCTTTTGACTTAAAATAAGGCAAAGAAAGGATGAAAGCTTTATTTCACAAGAAAATTATGCAAAAATATATACTATTGAAGAAAAAATTATCACTCTAGAACATGTAAGAACTTCTCTTCAGCTAGTAGATATTTTTACAAAATCATTTGATGCAATTGTTGGATATTATGTCCTAAAATCTCTAAGAGGTTTAAAACAATATTATTATCTAAAAATATTATTTTTAATAACTAAATAATCTATCTATATCTATATCATCTAGAAAGTAATGTAACCCTCGTACTATCAAAGAGTGAAGTGAACTATTTTAGTTCAGTCTATGTTTGACCCAAAGATTATTATATCCTTAGGATTACGATTATATTATTCTACTCTTTTTCCATTTCTCTTCAATCACTATTTTTCCCTCCCCTTTTTCCTTAGTCACTATTCCCTACTATTCCATTTCTCCTATGTCACTATTACTCCCTCTTTCCCTCGGTTATTATATATTTTATAAATTTTATTGTCACGAGGAAAATAAAAACTTTTTTTCATGTATATATATTTAAATATTTAATTTAATTAAAAAATTAAATGAAATTTTGTGTAACATTACAAATTAAAAGATTGTAGTATAATTTATGAAATTAACATGACAATGCCAACTTGACCACCAAATCAATTTTCATTTTTTAATTTGTTTAAATTTAAATGATTTTTTTCTAGAACCAATTCAATTTTTTTTTCAAACAATAACAATTTTTAAAAGTCTTAAATAAGGTTAATTATCATATTAGAATCAAAATTATTAAAATTTAAATGACCAAAACTTATAGTTTAAGTAAAATATTTAACGTGTAGCAGTTTAAACAAAAAAAACTTGAAAACCTAAATAGTATAAATAAATATGTGAACTTAATTAATTAATTAAAATAACATTTAAACATTCTTGGCCTCATTTTAACTTTTTATTTTTTCTAAGATTTTCAAAGGTGATCTAATGGTCACCGAGCAGTCATAAATTGTCATTAATCTAATACTCTCATCCCAAATTATGAATTAAATTTCTTGACTTAATTTTTTTATCACTAATTATTATTTTTCATAAAAAAAATAAAATGTTATCATTTAAGTTAATTTATTAGCGTTTTTGTTTGTTGACCTTTTCTCTATCCAATTTTTTGTACTAGCATCAATTAGTCACTTATGGTAGTGAAAAATTGAAACTAAATGAACATTCTAATTAACCATATTTGATAAAACTAATTGAAGAAAAATGTATTATAATTCATATGTATGTCAAAAAGGAGTAGTGAAAAATTCAAATTATAATAATCTTCACCCCAAACACAAACTCTAATAATCTGCATCCAAAACGTAGACTACAATAATCTCTAGACTATTATCACTCACTCTTTGTTACAAACCTGTCTTTTATAGATTCCTATTTTTAATAATAAAGTAATTTATTTTTAAAATAAAAATATATGTAAAAGGGTTAACTTGGTTTAGACAAAAAATAAAATAATCGTAAAAATAACAATCAAATTGTTTATATGTTTATCTATATCTAAATCTTTTAGATCGTACATAAAAAAATATTTTGTTTTAAATTATGGCATGTTTCCAATTAGATAATTGTTCTCACTTTTTTTTAATTTTTTTTTATTCCCACTATTTTCTAAGCATTTATTTTCTAAGCATTAATGATGTGTATAATTTTGGTTTACTATATGTATTCACTTTCTATGATTGTTATTGCTTTTAATCTCTATAAATGGCTAAAAATTGAACCTCAAATATTGATTTTTGACTCCACATATGGCTGGTGGTATGGAACCAGTTGGGCATAGAGAAAAGTGATTCCCAACCTCAAGTTGGGAGTTGGTGAGTGCAATTGTTGTCTACAATTCTTCTTCATTTGGGTCGGGTCAGGAATAAAACAATACGGATCCGGGTTGCGTTGGCGTTCAATGAACGCGTCGGTTTATTTCACACCGACCCCCCCGCTCCTTTTCTTTTCCTTTTCCTCTTCCTTTTCTAAGATAAAATGATTTTCTTTTCCAATTCCAATCTCAACCATCCATTACTAATCTACATCCTCCACGTCATCCTCCCAGAACATTCCAGCTCAATCCAACCAAATTTTATATTGAATTCTTTGTTACCGCCTTCCCCCCACCAACACCTCTCTATAAGTACCCCTCGTTTGCCTTCCCTCTTCTTCCATCCTTCCTTCTTTCTTTACTCCCTCCTTTCATCCGTCTCCCTCGCCTTCTGGTAACTCTCTCTTTCTTTCATTACTTGTTTTTACCCTTTTCTTTTCTGGGTTCTTTTCATGTCCCTCCTTCTGCTTAATCCTTCATACGCTTTTCTTTTATAATCAAATCTCTGATATGATCTTATGAATTTAATGGAAATCTTTGTTTTTTGTTTCTTCTTCTCTCTCTCTTTTCTTTTTTCTTTTAGATCTTGTGGTATTTGTTCTGATCATTTGCTAATTCTGGTGTTGGCTTATTCAATGAAGAGCCGATGCCGAATTCGGAAATCTTTTATTCTTCCTTTTTAATTGTGATTATCATTAATTGTTTGCTTCTTTTGGTTACGAAGATCTGAATCCCGTCTGAGTTCGGTAACGAGTTTTAAGTGTTCGTGAGAAAACAATCATGTATTTAGAAGCACGGAACATTGAACATTAAACATTAAACATTAAACAAACGGATCTAATATCCAACAAGGGTCTTTGCTTTTGCTTTTAAATTCTAGTATTTCTAGTATCTTAAGGTCTATGGATAGTGAAGGGTTTAGGTTTCCAACAATAATTATTGTTACTATGCTTTCAGATTCCCGGTTGTTCGGGTTCGAGTAAGTTTCCATTCAAACAAGGTTCATGGTTGAATTAGATTTCCAGATCCCATCTGCATTTGATCCATTTGCCGACGCCAAAGATTCGGATGCCCCCGGAACGAAGGAGTATGTTCATATTCGCGTCCAGCAAAGGAACGGAAAGAAGTGCTTGACAACAGTTCAAGGTCTGAAAAAAGAGTTCAGCTACGAGAAGATTCTCAAAGACGTGAAGAAGGAGTTCTGCTGTAATGGTAACGTTGTGCAAGACAAAGAATTGGGGAAGATAATTCAACTTCAGGGTGATCAACGCAAGAACGTCTCTCAGTTTCTTGTTCAGGCTGGTCTTGTCAAGAAAGATCAGATCAAGATCCATGGATTTTAAGCAACCTTCTGTTTGATGTTTTATCTTATGCTGTTGAATTGGGAGTACTGAACGAGTCTTTGTATGTTTTTTTCTTTCGTCGTTATCTTTTTCTTTTTCGATGGATCGTATGTGGGTGTGTGAAGATGGGAACTTACTATCAATGAAGCGTTTGATTTTGAGTATTTGCCTTGAAATTTCTGGTTTTTAAT TAGCTAGGGTATATTTTATCTTTTAAAAGGTAGGGCTGCAGCAGCCACAAGAGTCTCTTAAATCGAGAGTCTCTTAAATCCAGAGTCTCTTCTTAAATCCAGAGTCTCTTAAATCCAGGAGGCCGATTCCCGGTTGTTCGGGTTCGAGTAAGTTTCCATTCAAACAAGGTTCATGGTTGAATTAGATTTCCAGATCCCATCTGCATTTGATCCATTTGCCGACGCCAAAGATTCGGATGCCCCCGGAACGAAGGAGTATGTTCATATTCGCGTCCAGCAAAGGAACGGAAAGAAGTGCTTGACAACAGTTCAAGGTCTGAAAAAAGAGTTCAGCTACGAGAAGATTCTCAAAGACGTGAAGAAGGAGTTCTGCTGTAATGGTAACGTTGTGCAAGACAAAGAATTGGGGAAGATAATTCAACTTCAGGGTGATCAACGCAAGAACGTCTCTCAGTTTCTTGTTCAGGCTGGTCTTGTCAAGAAAGATCAGATCAAGATCCATGGATTTTAAGCAACCTTCTGTTTGATGTTTTATCTTATGCTGTTGAATTGGGAGTACTGAACGAGTCTTTGTATGTTTTTTTCTTTCGTCGTTATCTTTTTCTTTTTCGATGGATCGTATGTGGGTGTGTGAAGATGGGAACTTACTATCAATGAAGCGTTTGATTTTGAGTATTTGCCTTGAAATTTCTGGTTTTTAAT ATGGTTGAATTAGATTTCCAGATCCCATCTGCATTTGATCCATTTGCCGACGCCAAAGATTCGGATGCCCCCGGAACGAAGGAGTATGTTCATATTCGCGTCCAGCAAAGGAACGGAAAGAAGTGCTTGACAACAGTTCAAGGTCTGAAAAAAGAGTTCAGCTACGAGAAGATTCTCAAAGACGTGAAGAAGGAGTTCTGCTGTAATGGTAACGTTGTGCAAGACAAAGAATTGGGGAAGATAATTCAACTTCAGGGTGATCAACGCAAGAACGTCTCTCAGTTTCTTGTTCAGGCTGGTCTTGTCAAGAAAGATCAGATCAAGATCCATGGATTTTAA MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF*
BLAST of Cucsa.007240 vs. Swiss-Prot
Match: SUI11_ARATH (Protein translation factor SUI1 homolog 1 OS=Arabidopsis thaliana GN=At4g27130 PE=1 SV=2) HSP 1 Score: 186.4 bits (472), Expect = 1.7e-46 Identity = 92/113 (81.42%), Postives = 100/113 (88.50%), Query Frame = 1
BLAST of Cucsa.007240 vs. Swiss-Prot
Match: SUI1_BRAOL (Protein translation factor SUI1 homolog OS=Brassica oleracea PE=3 SV=1) HSP 1 Score: 184.9 bits (468), Expect = 4.9e-46 Identity = 91/113 (80.53%), Postives = 100/113 (88.50%), Query Frame = 1
BLAST of Cucsa.007240 vs. Swiss-Prot
Match: SUI12_ARATH (Protein translation factor SUI1 homolog 2 OS=Arabidopsis thaliana GN=At1g54290 PE=3 SV=1) HSP 1 Score: 184.5 bits (467), Expect = 6.4e-46 Identity = 90/113 (79.65%), Postives = 100/113 (88.50%), Query Frame = 1
BLAST of Cucsa.007240 vs. Swiss-Prot
Match: SUI1_ORYSI (Protein translation factor SUI1 homolog OS=Oryza sativa subsp. indica GN=GOS2 PE=2 SV=1) HSP 1 Score: 181.0 bits (458), Expect = 7.1e-45 Identity = 87/115 (75.65%), Postives = 100/115 (86.96%), Query Frame = 1
BLAST of Cucsa.007240 vs. Swiss-Prot
Match: SUI1_MAIZE (Protein translation factor SUI1 homolog OS=Zea mays GN=TIF PE=3 SV=1) HSP 1 Score: 181.0 bits (458), Expect = 7.1e-45 Identity = 87/115 (75.65%), Postives = 100/115 (86.96%), Query Frame = 1
BLAST of Cucsa.007240 vs. TrEMBL
Match: A0A0A0K771_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G209580 PE=4 SV=1) HSP 1 Score: 228.8 bits (582), Expect = 3.3e-57 Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 1
BLAST of Cucsa.007240 vs. TrEMBL
Match: A0A0A0L7M8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G077610 PE=4 SV=1) HSP 1 Score: 221.5 bits (563), Expect = 5.3e-55 Identity = 107/112 (95.54%), Postives = 111/112 (99.11%), Query Frame = 1
BLAST of Cucsa.007240 vs. TrEMBL
Match: M5X305_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013625mg PE=4 SV=1) HSP 1 Score: 209.1 bits (531), Expect = 2.7e-51 Identity = 100/112 (89.29%), Postives = 108/112 (96.43%), Query Frame = 1
BLAST of Cucsa.007240 vs. TrEMBL
Match: D7T8C6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0090g00420 PE=4 SV=1) HSP 1 Score: 208.8 bits (530), Expect = 3.5e-51 Identity = 100/112 (89.29%), Postives = 107/112 (95.54%), Query Frame = 1
BLAST of Cucsa.007240 vs. TrEMBL
Match: F2VQM9_CATRO (Putative eukaryotic translation initiation factor SUI1 OS=Catharanthus roseus PE=2 SV=1) HSP 1 Score: 208.4 bits (529), Expect = 4.6e-51 Identity = 98/112 (87.50%), Postives = 107/112 (95.54%), Query Frame = 1
BLAST of Cucsa.007240 vs. TAIR10
Match: AT5G54940.1 (AT5G54940.1 Translation initiation factor SUI1 family protein) HSP 1 Score: 203.0 bits (515), Expect = 9.9e-53 Identity = 96/112 (85.71%), Postives = 105/112 (93.75%), Query Frame = 1
BLAST of Cucsa.007240 vs. TAIR10
Match: AT4G27130.1 (AT4G27130.1 Translation initiation factor SUI1 family protein) HSP 1 Score: 186.4 bits (472), Expect = 9.5e-48 Identity = 92/113 (81.42%), Postives = 100/113 (88.50%), Query Frame = 1
BLAST of Cucsa.007240 vs. TAIR10
Match: AT5G54760.1 (AT5G54760.1 Translation initiation factor SUI1 family protein) HSP 1 Score: 186.0 bits (471), Expect = 1.2e-47 Identity = 92/113 (81.42%), Postives = 100/113 (88.50%), Query Frame = 1
BLAST of Cucsa.007240 vs. TAIR10
Match: AT1G54290.1 (AT1G54290.1 Translation initiation factor SUI1 family protein) HSP 1 Score: 184.5 bits (467), Expect = 3.6e-47 Identity = 90/113 (79.65%), Postives = 100/113 (88.50%), Query Frame = 1
BLAST of Cucsa.007240 vs. NCBI nr
Match: gi|449444048|ref|XP_004139787.1| (PREDICTED: protein translation factor SUI1 homolog 1-like [Cucumis sativus]) HSP 1 Score: 228.8 bits (582), Expect = 4.8e-57 Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 1
BLAST of Cucsa.007240 vs. NCBI nr
Match: gi|659126887|ref|XP_008463414.1| (PREDICTED: protein translation factor SUI1 homolog 2 [Cucumis melo]) HSP 1 Score: 221.5 bits (563), Expect = 7.6e-55 Identity = 107/112 (95.54%), Postives = 111/112 (99.11%), Query Frame = 1
BLAST of Cucsa.007240 vs. NCBI nr
Match: gi|1009111199|ref|XP_015899773.1| (PREDICTED: protein translation factor SUI1 homolog [Ziziphus jujuba]) HSP 1 Score: 211.8 bits (538), Expect = 6.0e-52 Identity = 101/112 (90.18%), Postives = 108/112 (96.43%), Query Frame = 1
BLAST of Cucsa.007240 vs. NCBI nr
Match: gi|747095072|ref|XP_011095399.1| (PREDICTED: protein translation factor SUI1 homolog [Sesamum indicum]) HSP 1 Score: 209.1 bits (531), Expect = 3.9e-51 Identity = 99/112 (88.39%), Postives = 107/112 (95.54%), Query Frame = 1
BLAST of Cucsa.007240 vs. NCBI nr
Match: gi|595877910|ref|XP_007212250.1| (hypothetical protein PRUPE_ppa013625mg [Prunus persica]) HSP 1 Score: 209.1 bits (531), Expect = 3.9e-51 Identity = 100/112 (89.29%), Postives = 108/112 (96.43%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |