CSPI07G09790 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI07G09790
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Translation factor SUI1
Location	Chr7 : 7759819 .. 7761408 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCTCTTCCTTTTCCTCTTCCTTTTCTAAGATAAAATGATTTTCTTTTCCAATTCCAATCTCAACCATCCATTACTAATCTACATCCTCCACGTCATCCTCCCAGAACATTCCAGCTCAATCCAACCAAATTTTATATTGAATTCTTTGTTACCGCCTTCCCCCCACCAACACCTCTCTATAAGTACCCCTCGTTTGCCTTCCCTCTTCTTCCATCCTTCCTTCTTTCTTTCCTCACTCCTTTCATCCGTCTCTCTCGCCTTCTGGTAACTTTCTCTTTCTTTCATTACTTGTTTTTACCCTTTTCTTTTCTGGGTTCTTTTCATGTCCCTCCTTCTGCTTAATCCTTCATACGCTTTTCTTTTATAATCAAATCTCTGATATGATCTTATGAATTTAATGGAAATCTTTGTTTTTTGTTTCTTCTTTTCTCTCTCTTTTCTTTTTTCTTTTAGATCTTGTGGTATTTGTTCTGATCATTTGCTAATTCTGGTGTTGGCTTATTCAATGAAGAGCCGCTGCCGAATTCGGAAATCTTTTATTCTTCCTTTTTAATTGTGATTATCATTAATTGTTTGCTTCTTTTGGTTACGAAGATCTGAATCCCGTCTGAGTTCGGTAACGAGTTTTAAGTGTTCGTGAGAAAACAATCATGTATTTAGAAGCACAGAACATTGAACATTAAACATTAAACAAACGGATCTAATATCCAACAAGGGTCTTTGCTTTTGCTTTTAAATTCTAGTATTTCTTGTATCTTAAGGTCTATGGATAGTGAAGGGTTTAGGTTTCCAACAATAATTATTGTTACTATGCTTTCAGATTCCCGGTTGTTCGGGTTCGAGTAAGTTTCCATTCAAACAAGGTTCATGGTTGAATTAGATTTCCAGATCCCATCTGCATTTGATCCATTTGCCGACGCCAAAGATTCGGATGCCCCCGGAACGAAGGAGTATGTTCATATTCGCGTCCAGCAAAGGAACGGAAAGAAGTGCTTGACAACAGTTCAAGGTCTGAAAAAAGAGTTCAGCTACGAGAAGATTCTCAAAGACGTGAAGAAGGAGTTCTGCTGTAATGGTAACGTTGTGCAAGACAAAGAATTGGGGAAGATAATTCAACTTCAGGGTGATCAACGCAAGAACGTCTCTCAGTTTCTTGTTCAGGCTGGTCTTGTCAAGAAAGATCAGATCAAGATCCATGGATTTTAAGCAACCTTCTGTTTGATGTTTTATCTTATGCTGTTGAATTGGGAGTACTGAACGAGTCTTTGTATGTTTTTTTCTTTCGTCGTTATCTTTTTCTTTTTCGATGGATCGTATGTGGGTGTGTGAAGATGGGAACTTACTATCAATGAAGCGTTTGATTTTGAGTATTTGCCTTGAAATTTCTGGTTTTTCATTCACCCCTTCCAACAACGTGGATAGGTCGGATTGAAAGTTTAGTTATAGTTAACCATAACCATTTCTAGTCCTCGTAGGAATAAAAAGAGGAGCCTTCTGTGGAAAATCTTCAACTTTTTTTCTTTTTTCTTGGGAACCTAAATGTATTATAATTTAATATATCTATACACTGTGTTACTTGTCAGTCAAGC

mRNA sequence

ATGGTTGAATTAGATTTCCAGATCCCATCTGCATTTGATCCATTTGCCGACGCCAAAGATTCGGATGCCCCCGGAACGAAGGAGTATGTTCATATTCGCGTCCAGCAAAGGAACGGAAAGAAGTGCTTGACAACAGTTCAAGGTCTGAAAAAAGAGTTCAGCTACGAGAAGATTCTCAAAGACGTGAAGAAGGAGTTCTGCTGTAATGGTAACGTTGTGCAAGACAAAGAATTGGGGAAGATAATTCAACTTCAGGGTGATCAACGCAAGAACGTCTCTCAGTTTCTTGTTCAGGCTGGTCTTGTCAAGAAAGATCAGATCAAGATCCATGGATTTTAA

Coding sequence (CDS)

ATGGTTGAATTAGATTTCCAGATCCCATCTGCATTTGATCCATTTGCCGACGCCAAAGATTCGGATGCCCCCGGAACGAAGGAGTATGTTCATATTCGCGTCCAGCAAAGGAACGGAAAGAAGTGCTTGACAACAGTTCAAGGTCTGAAAAAAGAGTTCAGCTACGAGAAGATTCTCAAAGACGTGAAGAAGGAGTTCTGCTGTAATGGTAACGTTGTGCAAGACAAAGAATTGGGGAAGATAATTCAACTTCAGGGTGATCAACGCAAGAACGTCTCTCAGTTTCTTGTTCAGGCTGGTCTTGTCAAGAAAGATCAGATCAAGATCCATGGATTTTAA

Homology

[Close]

BLAST of CSPI07G09790 vs. Swiss-Prot
Match: SUI11_ARATH (Protein translation factor SUI1 homolog 1 OS=Arabidopsis thaliana GN=At4g27130 PE=1 SV=2)

HSP 1 Score: 186.4 bits (472), Expect = 1.7e-46
Identity = 92/113 (81.42%), Postives = 100/113 (88.50%), Query Frame = 1


Query: 1   MVELDFQIPSAFDPFADAKDSDA-PGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKIL 60
           M ELD Q+P+AFDPFADA   D+  GTKEYVHIRVQQRNG+K LTTVQGLKKE+SY KIL
Sbjct: 1   MSELDSQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKIL 60

Query: 61  KDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           KD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLVQAGLVKKD IKIHGF
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113

[Close]

BLAST of CSPI07G09790 vs. Swiss-Prot
Match: SUI1_BRAOL (Protein translation factor SUI1 homolog OS=Brassica oleracea PE=3 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 4.9e-46
Identity = 91/113 (80.53%), Postives = 100/113 (88.50%), Query Frame = 1


Query: 1   MVELDFQIPSAFDPFADAKDSDA-PGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKIL 60
           M ELD Q+P+AFDPFADA   D+  GTKEYVHIRVQQRNG+K LTTVQGLKKE+SY KIL
Sbjct: 1   MSELDSQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKIL 60

Query: 61  KDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           KD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLVQAGLVKKD I+IHGF
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDDIQIHGF 113

[Close]

BLAST of CSPI07G09790 vs. Swiss-Prot
Match: SUI12_ARATH (Protein translation factor SUI1 homolog 2 OS=Arabidopsis thaliana GN=At1g54290 PE=3 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 6.4e-46
Identity = 90/113 (79.65%), Postives = 100/113 (88.50%), Query Frame = 1


Query: 1   MVELDFQIPSAFDPFADAKDSDA-PGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKIL 60
           M +L+ Q+P+AFDPFADA   D+  GTKEYVHIRVQQRNG+K LTTVQGLKKE+SY KIL
Sbjct: 1   MSDLEVQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYSKIL 60

Query: 61  KDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           KD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLVQAGLVKKD IKIHGF
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113

[Close]

BLAST of CSPI07G09790 vs. Swiss-Prot
Match: SUI1_ORYSI (Protein translation factor SUI1 homolog OS=Oryza sativa subsp. indica GN=GOS2 PE=2 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 7.1e-45
Identity = 87/115 (75.65%), Postives = 100/115 (86.96%), Query Frame = 1


Query: 1   MVELDFQIPSAFDPFADAKDSD---APGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEK 60
           M +LD QIP+AFDPFA+A   D   A G+K+YVH+R+QQRNG+K LTTVQGLKKEFSY K
Sbjct: 1   MSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNK 60

Query: 61  ILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           ILKD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLVQAG+VKK+ IKIHGF
Sbjct: 61  ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115

[Close]

BLAST of CSPI07G09790 vs. Swiss-Prot
Match: SUI1_MAIZE (Protein translation factor SUI1 homolog OS=Zea mays GN=TIF PE=3 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 7.1e-45
Identity = 87/115 (75.65%), Postives = 100/115 (86.96%), Query Frame = 1


Query: 1   MVELDFQIPSAFDPFADAKDSD---APGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEK 60
           M +LD QIP+AFDPFA+A   D   A G+K+YVH+R+QQRNG+K LTTVQGLKKEFSY K
Sbjct: 1   MSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYSK 60

Query: 61  ILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           ILKD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLVQAG+VKK+ IKIHGF
Sbjct: 61  ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115

[Close]

BLAST of CSPI07G09790 vs. TrEMBL
Match: A0A0A0K771_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G209580 PE=4 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 3.3e-57
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 1


Query: 1   MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60
           MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK
Sbjct: 1   MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60

Query: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF
Sbjct: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

[Close]

BLAST of CSPI07G09790 vs. TrEMBL
Match: A0A0A0L7M8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G077610 PE=4 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 5.3e-55
Identity = 107/112 (95.54%), Postives = 111/112 (99.11%), Query Frame = 1


Query: 1   MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60
           MV+LD QIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSY+KILK
Sbjct: 1   MVDLDVQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK 60

Query: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           D+KK+FCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF
Sbjct: 61  DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

[Close]

BLAST of CSPI07G09790 vs. TrEMBL
Match: M5X305_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013625mg PE=4 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 2.7e-51
Identity = 100/112 (89.29%), Postives = 108/112 (96.43%), Query Frame = 1


Query: 1   MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60
           MVELD QIP+AFDPFA+AKD+DAPG KEYVHIRVQQRNGKKCLTTVQGLKK+FSYEKILK
Sbjct: 1   MVELDVQIPTAFDPFAEAKDADAPGAKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILK 60

Query: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           D+KKEFCCNGNVVQDKELGKIIQLQGDQRKNV QFLVQA +VKK+QIK+HGF
Sbjct: 61  DLKKEFCCNGNVVQDKELGKIIQLQGDQRKNVLQFLVQAKIVKKEQIKMHGF 112

[Close]

BLAST of CSPI07G09790 vs. TrEMBL
Match: D7T8C6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0090g00420 PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 3.5e-51
Identity = 100/112 (89.29%), Postives = 107/112 (95.54%), Query Frame = 1


Query: 1   MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60
           MVELD QIPSAFDPFA+AKDS APG KEYVHIR+QQRNGKK LTTVQGLKK++SYEKILK
Sbjct: 1   MVELDLQIPSAFDPFAEAKDSGAPGAKEYVHIRIQQRNGKKSLTTVQGLKKDYSYEKILK 60

Query: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           D+KKEFCCNGNVVQDKELGK+IQLQGDQRKNVS FLVQAGLVKK+QIKIHGF
Sbjct: 61  DLKKEFCCNGNVVQDKELGKVIQLQGDQRKNVSNFLVQAGLVKKEQIKIHGF 112

[Close]

BLAST of CSPI07G09790 vs. TrEMBL
Match: F2VQM9_CATRO (Putative eukaryotic translation initiation factor SUI1 OS=Catharanthus roseus PE=2 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 4.6e-51
Identity = 98/112 (87.50%), Postives = 107/112 (95.54%), Query Frame = 1


Query: 1   MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60
           MV+LD QIP+AFDPFA+AKDS APG KEYVHIRVQQRNGKKCLTT+QGLKKEFS EKILK
Sbjct: 1   MVDLDIQIPTAFDPFAEAKDSGAPGAKEYVHIRVQQRNGKKCLTTIQGLKKEFSLEKILK 60

Query: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           D+KK+FCCNGNVVQDKELGK+IQLQGDQRKNVSQFL+ AG+VKKDQIKIHGF
Sbjct: 61  DLKKDFCCNGNVVQDKELGKVIQLQGDQRKNVSQFLITAGIVKKDQIKIHGF 112

[Close]

BLAST of CSPI07G09790 vs. TAIR10
Match: AT5G54940.1 (AT5G54940.1 Translation initiation factor SUI1 family protein)

HSP 1 Score: 203.0 bits (515), Expect = 9.9e-53
Identity = 96/112 (85.71%), Postives = 105/112 (93.75%), Query Frame = 1


Query: 1   MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60
           MVELD QIPSA+DPFA+AKDSDAPG KE +HIR+QQRNGKK LTTVQGLKKE+SYE+ILK
Sbjct: 1   MVELDIQIPSAYDPFAEAKDSDAPGAKENIHIRIQQRNGKKSLTTVQGLKKEYSYERILK 60

Query: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           D+KK+FCCNGNVVQDKELGKIIQLQGDQRK VSQFLVQ G+ KKDQIKIHGF
Sbjct: 61  DLKKDFCCNGNVVQDKELGKIIQLQGDQRKKVSQFLVQTGIAKKDQIKIHGF 112

[Close]

BLAST of CSPI07G09790 vs. TAIR10
Match: AT4G27130.1 (AT4G27130.1 Translation initiation factor SUI1 family protein)

HSP 1 Score: 186.4 bits (472), Expect = 9.5e-48
Identity = 92/113 (81.42%), Postives = 100/113 (88.50%), Query Frame = 1


Query: 1   MVELDFQIPSAFDPFADAKDSDA-PGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKIL 60
           M ELD Q+P+AFDPFADA   D+  GTKEYVHIRVQQRNG+K LTTVQGLKKE+SY KIL
Sbjct: 1   MSELDSQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKIL 60

Query: 61  KDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           KD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLVQAGLVKKD IKIHGF
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113

[Close]

BLAST of CSPI07G09790 vs. TAIR10
Match: AT5G54760.1 (AT5G54760.1 Translation initiation factor SUI1 family protein)

HSP 1 Score: 186.0 bits (471), Expect = 1.2e-47
Identity = 92/113 (81.42%), Postives = 100/113 (88.50%), Query Frame = 1


Query: 1   MVELDFQIPSAFDPFADAKDSDA-PGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKIL 60
           M ELD Q+P+AFDPFADA   D+  GTKEYVHIRVQQRNG+K LTTVQGLKKE+SY KIL
Sbjct: 1   MSELDSQVPTAFDPFADANVEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKIL 60

Query: 61  KDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           KD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLVQAGLVKKD IKIHGF
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113

[Close]

BLAST of CSPI07G09790 vs. TAIR10
Match: AT1G54290.1 (AT1G54290.1 Translation initiation factor SUI1 family protein)

HSP 1 Score: 184.5 bits (467), Expect = 3.6e-47
Identity = 90/113 (79.65%), Postives = 100/113 (88.50%), Query Frame = 1


Query: 1   MVELDFQIPSAFDPFADAKDSDA-PGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKIL 60
           M +L+ Q+P+AFDPFADA   D+  GTKEYVHIRVQQRNG+K LTTVQGLKKE+SY KIL
Sbjct: 1   MSDLEVQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYSKIL 60

Query: 61  KDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           KD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLVQAGLVKKD IKIHGF
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113

[Close]

BLAST of CSPI07G09790 vs. NCBI nr
Match: gi|449444048|ref|XP_004139787.1| (PREDICTED: protein translation factor SUI1 homolog 1-like [Cucumis sativus])

HSP 1 Score: 228.8 bits (582), Expect = 4.8e-57
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 1


Query: 1   MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60
           MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK
Sbjct: 1   MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60

Query: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF
Sbjct: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

[Close]

BLAST of CSPI07G09790 vs. NCBI nr
Match: gi|659126887|ref|XP_008463414.1| (PREDICTED: protein translation factor SUI1 homolog 2 [Cucumis melo])

HSP 1 Score: 221.5 bits (563), Expect = 7.6e-55
Identity = 107/112 (95.54%), Postives = 111/112 (99.11%), Query Frame = 1


Query: 1   MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60
           MV+LD QIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSY+KILK
Sbjct: 1   MVDLDVQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK 60

Query: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           D+KK+FCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF
Sbjct: 61  DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

[Close]

BLAST of CSPI07G09790 vs. NCBI nr
Match: gi|1009111199|ref|XP_015899773.1| (PREDICTED: protein translation factor SUI1 homolog [Ziziphus jujuba])

HSP 1 Score: 211.8 bits (538), Expect = 6.0e-52
Identity = 101/112 (90.18%), Postives = 108/112 (96.43%), Query Frame = 1


Query: 1   MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60
           MVELD QIP+ FDPFA+AKDSDAPG KEYVHIRVQQRNGKKCLTTVQGL+K+FSYE+ILK
Sbjct: 1   MVELDVQIPTTFDPFAEAKDSDAPGAKEYVHIRVQQRNGKKCLTTVQGLRKDFSYERILK 60

Query: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           D+KKEFCCNGNVVQDK LGKIIQLQGDQRKNVSQFLVQAG+VKKDQIKIHGF
Sbjct: 61  DLKKEFCCNGNVVQDKVLGKIIQLQGDQRKNVSQFLVQAGIVKKDQIKIHGF 112

[Close]

BLAST of CSPI07G09790 vs. NCBI nr
Match: gi|747095072|ref|XP_011095399.1| (PREDICTED: protein translation factor SUI1 homolog [Sesamum indicum])

HSP 1 Score: 209.1 bits (531), Expect = 3.9e-51
Identity = 99/112 (88.39%), Postives = 107/112 (95.54%), Query Frame = 1


Query: 1   MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60
           MV+LD QIP+AFDPFA+AKDS APG KEYVHIR+QQRNGKK LTTVQGL+KEFSYEKILK
Sbjct: 1   MVDLDLQIPTAFDPFAEAKDSGAPGAKEYVHIRIQQRNGKKSLTTVQGLRKEFSYEKILK 60

Query: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           DVKKEFCCNGNVVQDKELGK+IQLQGDQRKNVSQFL+ AG+VKKDQIKIHGF
Sbjct: 61  DVKKEFCCNGNVVQDKELGKVIQLQGDQRKNVSQFLISAGIVKKDQIKIHGF 112

[Close]

BLAST of CSPI07G09790 vs. NCBI nr
Match: gi|595877910|ref|XP_007212250.1| (hypothetical protein PRUPE_ppa013625mg [Prunus persica])

HSP 1 Score: 209.1 bits (531), Expect = 3.9e-51
Identity = 100/112 (89.29%), Postives = 108/112 (96.43%), Query Frame = 1


Query: 1   MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60
           MVELD QIP+AFDPFA+AKD+DAPG KEYVHIRVQQRNGKKCLTTVQGLKK+FSYEKILK
Sbjct: 1   MVELDVQIPTAFDPFAEAKDADAPGAKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILK 60

Query: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           D+KKEFCCNGNVVQDKELGKIIQLQGDQRKNV QFLVQA +VKK+QIK+HGF
Sbjct: 61  DLKKEFCCNGNVVQDKELGKIIQLQGDQRKNVLQFLVQAKIVKKEQIKMHGF 112

The following BLAST results are available for this feature:

BLAST of CSPI07G09790 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SUI11_ARATH	1.7e-46	81.42	Protein translation factor SUI1 homolog 1 OS=Arabidopsis thaliana GN=At4g27130 P...	[more]
SUI1_BRAOL	4.9e-46	80.53	Protein translation factor SUI1 homolog OS=Brassica oleracea PE=3 SV=1	[more]
SUI12_ARATH	6.4e-46	79.65	Protein translation factor SUI1 homolog 2 OS=Arabidopsis thaliana GN=At1g54290 P...	[more]
SUI1_ORYSI	7.1e-45	75.65	Protein translation factor SUI1 homolog OS=Oryza sativa subsp. indica GN=GOS2 PE...	[more]
SUI1_MAIZE	7.1e-45	75.65	Protein translation factor SUI1 homolog OS=Zea mays GN=TIF PE=3 SV=1	[more]

BLAST of CSPI07G09790 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K771_CUCSA	3.3e-57	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G209580 PE=4 SV=1	[more]
A0A0A0L7M8_CUCSA	5.3e-55	95.54	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G077610 PE=4 SV=1	[more]
M5X305_PRUPE	2.7e-51	89.29	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013625mg PE=4 SV=1	[more]
D7T8C6_VITVI	3.5e-51	89.29	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0090g00420 PE=4 SV=...	[more]
F2VQM9_CATRO	4.6e-51	87.50	Putative eukaryotic translation initiation factor SUI1 OS=Catharanthus roseus PE...	[more]

BLAST of CSPI07G09790 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G54940.1	9.9e-53	85.71	Translation initiation factor SUI1 family protein	[more]
AT4G27130.1	9.5e-48	81.42	Translation initiation factor SUI1 family protein	[more]
AT5G54760.1	1.2e-47	81.42	Translation initiation factor SUI1 family protein	[more]
AT1G54290.1	3.6e-47	79.65	Translation initiation factor SUI1 family protein	[more]

BLAST of CSPI07G09790 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449444048\|ref\|XP_004139787.1\|	4.8e-57	100.00	PREDICTED: protein translation factor SUI1 homolog 1-like [Cucumis sativus]	[more]
gi\|659126887\|ref\|XP_008463414.1\|	7.6e-55	95.54	PREDICTED: protein translation factor SUI1 homolog 2 [Cucumis melo]	[more]
gi\|1009111199\|ref\|XP_015899773.1\|	6.0e-52	90.18	PREDICTED: protein translation factor SUI1 homolog [Ziziphus jujuba]	[more]
gi\|747095072\|ref\|XP_011095399.1\|	3.9e-51	88.39	PREDICTED: protein translation factor SUI1 homolog [Sesamum indicum]	[more]
gi\|595877910\|ref\|XP_007212250.1\|	3.9e-51	89.29	hypothetical protein PRUPE_ppa013625mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001950	SUI1
IPR005874	SUI1_euk

Vocabulary: **Molecular Function**
Term	Definition
GO:0003743	translation initiation factor activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006413	translational initiation

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006446	regulation of translational initiation
biological_process	GO:0006413	translational initiation
biological_process	GO:0051225	spindle assembly
cellular_component	GO:0005840	ribosome
cellular_component	GO:0070652	HAUS complex
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003743	translation initiation factor activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI07G09790.1	CSPI07G09790.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001950	Translation initiation factor SUI1	GENE3D	G3DSA:3.30.780.10		coord: 4..112 score: 1.6
IPR001950	Translation initiation factor SUI1	PFAM	PF01253	SUI1	coord: 27..101 score: 8.5
IPR001950	Translation initiation factor SUI1	PROFILE	PS50296	SUI1	coord: 30..100 score: 2
IPR001950	Translation initiation factor SUI1	unknown	SSF55159	eIF1-like	coord: 4..112 score: 1.2
IPR005874	Eukaryotic translation initiation factor SUI1	PIR	PIRSF004499	Transl_init_SUI1_Euk	coord: 1..112 score: 2.1
IPR005874	Eukaryotic translation initiation factor SUI1	TIGRFAMs	TIGR01160	TIGR01160	coord: 7..112 score: 1.2
None	No IPR available	PANTHER	PTHR10388	EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1	coord: 1..112 score: 1.2
None	No IPR available	PANTHER	PTHR10388:SF16	SUBFAMILY NOT NAMED	coord: 1..112 score: 1.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI07G09790	Cla016325	Watermelon (97103) v1	cpiwmB573
CSPI07G09790	Csa7G209580	Cucumber (Chinese Long) v2	cpicuB354
CSPI07G09790	MELO3C013163	Melon (DHL92) v3.5.1	cpimeB542
CSPI07G09790	ClCG09G010810	Watermelon (Charleston Gray)	cpiwcgB545
CSPI07G09790	Lsi02G019030	Bottle gourd (USVL1VR-Ls)	cpilsiB524
CSPI07G09790	MELO3C013163.2	Melon (DHL92) v3.6.1	cpimedB527
CSPI07G09790	CsaV3_7G021830	Cucumber (Chinese Long) v3	cpicucB414
CSPI07G09790	Cla97C09G173550	Watermelon (97103) v2	cpiwmbB588
CSPI07G09790	Bhi09G001377	Wax gourd	cpiwgoB705
CSPI07G09790	Cucsa.007240	Cucumber (Gy14) v1	cgycpiB128
CSPI07G09790	CmaCh01G011290	Cucurbita maxima (Rimu)	cmacpiB503
CSPI07G09790	CmaCh09G009550	Cucurbita maxima (Rimu)	cmacpiB040
CSPI07G09790	CmoCh09G009530	Cucurbita moschata (Rifu)	cmocpiB030
CSPI07G09790	CmoCh01G011800	Cucurbita moschata (Rifu)	cmocpiB494
CSPI07G09790	Cp4.1LG06g08880	Cucurbita pepo (Zucchini)	cpecpiB797
CSPI07G09790	Cp4.1LG02g01050	Cucurbita pepo (Zucchini)	cpecpiB587
CSPI07G09790	CsGy7G009290	Cucumber (Gy14) v2	cgybcpiB331
CSPI07G09790	Carg12823	Silver-seed gourd	carcpiB0943

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None