CsGy7G009290 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy7G009290
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	protein translation factor SUI1 homolog 1-like
Location	Chr7 : 11665586 .. 11665924 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTGAATTAGATTTCCAGATCCCATCTGCATTTGATCCATTTGCCGACGCCAAAGATTCGGATGCCCCCGGAACGAAGGAGTATGTTCATATTCGCGTCCAGCAAAGGAACGGAAAGAAGTGCTTGACAACAGTTCAAGGTCTGAAAAAAGAGTTCAGCTACGAGAAGATTCTCAAAGACGTGAAGAAGGAGTTCTGCTGTAATGGTAACGTTGTGCAAGACAAAGAATTGGGGAAGATAATTCAACTTCAGGGTGATCAACGCAAGAACGTCTCTCAGTTTCTTGTTCAGGCTGGTCTTGTCAAGAAAGATCAGATCAAGATCCATGGATTTTAA

mRNA sequence

ATGGTTGAATTAGATTTCCAGATCCCATCTGCATTTGATCCATTTGCCGACGCCAAAGATTCGGATGCCCCCGGAACGAAGGAGTATGTTCATATTCGCGTCCAGCAAAGGAACGGAAAGAAGTGCTTGACAACAGTTCAAGGTCTGAAAAAAGAGTTCAGCTACGAGAAGATTCTCAAAGACGTGAAGAAGGAGTTCTGCTGTAATGGTAACGTTGTGCAAGACAAAGAATTGGGGAAGATAATTCAACTTCAGGGTGATCAACGCAAGAACGTCTCTCAGTTTCTTGTTCAGGCTGGTCTTGTCAAGAAAGATCAGATCAAGATCCATGGATTTTAA

Coding sequence (CDS)

ATGGTTGAATTAGATTTCCAGATCCCATCTGCATTTGATCCATTTGCCGACGCCAAAGATTCGGATGCCCCCGGAACGAAGGAGTATGTTCATATTCGCGTCCAGCAAAGGAACGGAAAGAAGTGCTTGACAACAGTTCAAGGTCTGAAAAAAGAGTTCAGCTACGAGAAGATTCTCAAAGACGTGAAGAAGGAGTTCTGCTGTAATGGTAACGTTGTGCAAGACAAAGAATTGGGGAAGATAATTCAACTTCAGGGTGATCAACGCAAGAACGTCTCTCAGTTTCTTGTTCAGGCTGGTCTTGTCAAGAAAGATCAGATCAAGATCCATGGATTTTAA

Protein sequence

MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF

Homology

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BLAST of CsGy7G009290 vs. NCBI nr
Match: XP_004139787.1 (PREDICTED: protein translation factor SUI1 homolog 1-like [Cucumis sativus] >XP_008447738.1 PREDICTED: protein translation factor SUI1 homolog 1-like [Cucumis melo] >XP_011658975.1 PREDICTED: protein translation factor SUI1 homolog 1-like [Cucumis sativus] >KGN44162.1 hypothetical protein Csa_7G209580 [Cucumis sativus])

HSP 1 Score: 228.4 bits (581), Expect = 1.2e-56
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60
           MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK
Sbjct: 1   MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60

Query: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF
Sbjct: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

[Close]

BLAST of CsGy7G009290 vs. NCBI nr
Match: XP_022976609.1 (protein translation factor SUI1 homolog 1 [Cucurbita maxima] >XP_022976610.1 protein translation factor SUI1 homolog 1 [Cucurbita maxima])

HSP 1 Score: 226.1 bits (575), Expect = 5.9e-56
Identity = 111/112 (99.11%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 1   MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60
           MVELDFQIPSAFDPFADAKDSDAPGTK YVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK
Sbjct: 1   MVELDFQIPSAFDPFADAKDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60

Query: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF
Sbjct: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

[Close]

BLAST of CsGy7G009290 vs. NCBI nr
Match: XP_022936190.1 (protein translation factor SUI1 homolog 1 [Cucurbita moschata])

HSP 1 Score: 224.9 bits (572), Expect = 1.3e-55
Identity = 110/112 (98.21%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 1   MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60
           MVELDFQIPSAFDPFADAKDSDAPGTK YVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK
Sbjct: 1   MVELDFQIPSAFDPFADAKDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60

Query: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           DVKKEFCCNGNVVQD+ELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF
Sbjct: 61  DVKKEFCCNGNVVQDRELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

[Close]

BLAST of CsGy7G009290 vs. NCBI nr
Match: XP_023536045.1 (protein translation factor SUI1 homolog 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 224.9 bits (572), Expect = 1.3e-55
Identity = 110/112 (98.21%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 1   MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60
           MVELDFQIPSAFDPFAD+KDSDAPGTK YVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK
Sbjct: 1   MVELDFQIPSAFDPFADSKDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60

Query: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF
Sbjct: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

[Close]

BLAST of CsGy7G009290 vs. NCBI nr
Match: XP_011650527.1 (PREDICTED: protein translation factor SUI1 homolog 2-like [Cucumis sativus] >XP_016903023.1 PREDICTED: protein translation factor SUI1 homolog 2 [Cucumis melo] >KGN56126.1 hypothetical protein Csa_3G077610 [Cucumis sativus])

HSP 1 Score: 221.1 bits (562), Expect = 1.9e-54
Identity = 107/112 (95.54%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 1   MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60
           MV+LD QIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSY+KILK
Sbjct: 1   MVDLDVQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK 60

Query: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           D+KK+FCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF
Sbjct: 61  DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

[Close]

BLAST of CsGy7G009290 vs. TAIR10
Match: AT5G54940.1 (Translation initiation factor SUI1 family protein)

HSP 1 Score: 202.6 bits (514), Expect = 1.3e-52
Identity = 96/112 (85.71%), Postives = 105/112 (93.75%), Query Frame = 0


Query: 1   MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60
           MVELD QIPSA+DPFA+AKDSDAPG KE +HIR+QQRNGKK LTTVQGLKKE+SYE+ILK
Sbjct: 1   MVELDIQIPSAYDPFAEAKDSDAPGAKENIHIRIQQRNGKKSLTTVQGLKKEYSYERILK 60

Query: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           D+KK+FCCNGNVVQDKELGKIIQLQGDQRK VSQFLVQ G+ KKDQIKIHGF
Sbjct: 61  DLKKDFCCNGNVVQDKELGKIIQLQGDQRKKVSQFLVQTGIAKKDQIKIHGF 112

[Close]

BLAST of CsGy7G009290 vs. TAIR10
Match: AT4G27130.1 (Translation initiation factor SUI1 family protein)

HSP 1 Score: 186.0 bits (471), Expect = 1.2e-47
Identity = 92/113 (81.42%), Postives = 100/113 (88.50%), Query Frame = 0


Query: 1   MVELDFQIPSAFDPFADAKDSDA-PGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKIL 60
           M ELD Q+P+AFDPFADA   D+  GTKEYVHIRVQQRNG+K LTTVQGLKKE+SY KIL
Sbjct: 1   MSELDSQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKIL 60

Query: 61  KDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           KD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLVQAGLVKKD IKIHGF
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113

[Close]

BLAST of CsGy7G009290 vs. TAIR10
Match: AT5G54760.1 (Translation initiation factor SUI1 family protein)

HSP 1 Score: 185.7 bits (470), Expect = 1.6e-47
Identity = 92/113 (81.42%), Postives = 100/113 (88.50%), Query Frame = 0


Query: 1   MVELDFQIPSAFDPFADAKDSDA-PGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKIL 60
           M ELD Q+P+AFDPFADA   D+  GTKEYVHIRVQQRNG+K LTTVQGLKKE+SY KIL
Sbjct: 1   MSELDSQVPTAFDPFADANVEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKIL 60

Query: 61  KDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           KD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLVQAGLVKKD IKIHGF
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113

[Close]

BLAST of CsGy7G009290 vs. TAIR10
Match: AT1G54290.1 (Translation initiation factor SUI1 family protein)

HSP 1 Score: 184.1 bits (466), Expect = 4.7e-47
Identity = 90/113 (79.65%), Postives = 100/113 (88.50%), Query Frame = 0


Query: 1   MVELDFQIPSAFDPFADAKDSDA-PGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKIL 60
           M +L+ Q+P+AFDPFADA   D+  GTKEYVHIRVQQRNG+K LTTVQGLKKE+SY KIL
Sbjct: 1   MSDLEVQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYSKIL 60

Query: 61  KDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           KD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLVQAGLVKKD IKIHGF
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113

[Close]

BLAST of CsGy7G009290 vs. Swiss-Prot
Match: sp|P41568|SUI11_ARATH (Protein translation factor SUI1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At4g27130 PE=1 SV=2)

HSP 1 Score: 186.0 bits (471), Expect = 2.2e-46
Identity = 92/113 (81.42%), Postives = 100/113 (88.50%), Query Frame = 0


Query: 1   MVELDFQIPSAFDPFADAKDSDA-PGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKIL 60
           M ELD Q+P+AFDPFADA   D+  GTKEYVHIRVQQRNG+K LTTVQGLKKE+SY KIL
Sbjct: 1   MSELDSQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKIL 60

Query: 61  KDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           KD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLVQAGLVKKD IKIHGF
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113

[Close]

BLAST of CsGy7G009290 vs. Swiss-Prot
Match: sp|Q9SQF4|SUI1_BRAOL (Protein translation factor SUI1 homolog OS=Brassica oleracea OX=3712 PE=3 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 6.5e-46
Identity = 91/113 (80.53%), Postives = 100/113 (88.50%), Query Frame = 0


Query: 1   MVELDFQIPSAFDPFADAKDSDA-PGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKIL 60
           M ELD Q+P+AFDPFADA   D+  GTKEYVHIRVQQRNG+K LTTVQGLKKE+SY KIL
Sbjct: 1   MSELDSQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKIL 60

Query: 61  KDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           KD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLVQAGLVKKD I+IHGF
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDDIQIHGF 113

[Close]

BLAST of CsGy7G009290 vs. Swiss-Prot
Match: sp|Q94JV4|SUI12_ARATH (Protein translation factor SUI1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1g54290 PE=3 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 8.5e-46
Identity = 90/113 (79.65%), Postives = 100/113 (88.50%), Query Frame = 0


Query: 1   MVELDFQIPSAFDPFADAKDSDA-PGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKIL 60
           M +L+ Q+P+AFDPFADA   D+  GTKEYVHIRVQQRNG+K LTTVQGLKKE+SY KIL
Sbjct: 1   MSDLEVQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYSKIL 60

Query: 61  KDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           KD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLVQAGLVKKD IKIHGF
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113

[Close]

BLAST of CsGy7G009290 vs. Swiss-Prot
Match: sp|P56330|SUI1_MAIZE (Protein translation factor SUI1 homolog OS=Zea mays OX=4577 GN=TIF PE=3 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 9.4e-45
Identity = 87/115 (75.65%), Postives = 100/115 (86.96%), Query Frame = 0


Query: 1   MVELDFQIPSAFDPFADAKDSD---APGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEK 60
           M +LD QIP+AFDPFA+A   D   A G+K+YVH+R+QQRNG+K LTTVQGLKKEFSY K
Sbjct: 1   MSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYSK 60

Query: 61  ILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           ILKD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLVQAG+VKK+ IKIHGF
Sbjct: 61  ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115

[Close]

BLAST of CsGy7G009290 vs. Swiss-Prot
Match: sp|A6MZM2|SUI1_ORYSI (Protein translation factor SUI1 homolog OS=Oryza sativa subsp. indica OX=39946 GN=GOS2 PE=2 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 9.4e-45
Identity = 87/115 (75.65%), Postives = 100/115 (86.96%), Query Frame = 0


Query: 1   MVELDFQIPSAFDPFADAKDSD---APGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEK 60
           M +LD QIP+AFDPFA+A   D   A G+K+YVH+R+QQRNG+K LTTVQGLKKEFSY K
Sbjct: 1   MSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNK 60

Query: 61  ILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           ILKD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLVQAG+VKK+ IKIHGF
Sbjct: 61  ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115

[Close]

BLAST of CsGy7G009290 vs. TrEMBL
Match: tr|A0A1S3BI45|A0A1S3BI45_CUCME (protein translation factor SUI1 homolog 1-like OS=Cucumis melo OX=3656 GN=LOC103490142 PE=4 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 7.9e-57
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60
           MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK
Sbjct: 1   MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60

Query: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF
Sbjct: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

[Close]

BLAST of CsGy7G009290 vs. TrEMBL
Match: tr|A0A0A0K771|A0A0A0K771_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G209580 PE=4 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 7.9e-57
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60
           MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK
Sbjct: 1   MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60

Query: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF
Sbjct: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

[Close]

BLAST of CsGy7G009290 vs. TrEMBL
Match: tr|A0A1S4E468|A0A1S4E468_CUCME (protein translation factor SUI1 homolog 2 OS=Cucumis melo OX=3656 GN=LOC103501585 PE=4 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 1.3e-54
Identity = 107/112 (95.54%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 1   MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60
           MV+LD QIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSY+KILK
Sbjct: 1   MVDLDVQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK 60

Query: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           D+KK+FCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF
Sbjct: 61  DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

[Close]

BLAST of CsGy7G009290 vs. TrEMBL
Match: tr|A0A0A0L7M8|A0A0A0L7M8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G077610 PE=4 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 1.3e-54
Identity = 107/112 (95.54%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 1   MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60
           MV+LD QIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSY+KILK
Sbjct: 1   MVDLDVQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK 60

Query: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           D+KK+FCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF
Sbjct: 61  DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

[Close]

BLAST of CsGy7G009290 vs. TrEMBL
Match: tr|A0A2P5F2H3|A0A2P5F2H3_9ROSA (Eukaryotic translation initiation factor SUI OS=Trema orientalis OX=63057 GN=TorRG33x02_123180 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 1.0e-51
Identity = 102/112 (91.07%), Postives = 108/112 (96.43%), Query Frame = 0


Query: 1   MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60
           MVELD QIPSAFDPFA+AKDSDAPG KEYVHIRVQQRNGKKCLTTVQGLK+E+SYE+ILK
Sbjct: 36  MVELDVQIPSAFDPFAEAKDSDAPGAKEYVHIRVQQRNGKKCLTTVQGLKQEYSYERILK 95

Query: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           D+K+ FCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKD IKIHGF
Sbjct: 96  DLKRVFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDHIKIHGF 147

The following BLAST results are available for this feature:

BLAST of CsGy7G009290 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139787.1	1.2e-56	100.00	PREDICTED: protein translation factor SUI1 homolog 1-like [Cucumis sativus] >XP_...	[more]
XP_022976609.1	5.9e-56	99.11	protein translation factor SUI1 homolog 1 [Cucurbita maxima] >XP_022976610.1 pro...	[more]
XP_022936190.1	1.3e-55	98.21	protein translation factor SUI1 homolog 1 [Cucurbita moschata]	[more]
XP_023536045.1	1.3e-55	98.21	protein translation factor SUI1 homolog 1 [Cucurbita pepo subsp. pepo]	[more]
XP_011650527.1	1.9e-54	95.54	PREDICTED: protein translation factor SUI1 homolog 2-like [Cucumis sativus] >XP_...	[more]

BLAST of CsGy7G009290 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G54940.1	1.3e-52	85.71	Translation initiation factor SUI1 family protein	[more]
AT4G27130.1	1.2e-47	81.42	Translation initiation factor SUI1 family protein	[more]
AT5G54760.1	1.6e-47	81.42	Translation initiation factor SUI1 family protein	[more]
AT1G54290.1	4.7e-47	79.65	Translation initiation factor SUI1 family protein	[more]

BLAST of CsGy7G009290 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P41568\|SUI11_ARATH	2.2e-46	81.42	Protein translation factor SUI1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At4...	[more]
sp\|Q9SQF4\|SUI1_BRAOL	6.5e-46	80.53	Protein translation factor SUI1 homolog OS=Brassica oleracea OX=3712 PE=3 SV=1	[more]
sp\|Q94JV4\|SUI12_ARATH	8.5e-46	79.65	Protein translation factor SUI1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1...	[more]
sp\|P56330\|SUI1_MAIZE	9.4e-45	75.65	Protein translation factor SUI1 homolog OS=Zea mays OX=4577 GN=TIF PE=3 SV=1	[more]
sp\|A6MZM2\|SUI1_ORYSI	9.4e-45	75.65	Protein translation factor SUI1 homolog OS=Oryza sativa subsp. indica OX=39946 G...	[more]

BLAST of CsGy7G009290 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BI45\|A0A1S3BI45_CUCME	7.9e-57	100.00	protein translation factor SUI1 homolog 1-like OS=Cucumis melo OX=3656 GN=LOC103...	[more]
tr\|A0A0A0K771\|A0A0A0K771_CUCSA	7.9e-57	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G209580 PE=4 SV=1	[more]
tr\|A0A1S4E468\|A0A1S4E468_CUCME	1.3e-54	95.54	protein translation factor SUI1 homolog 2 OS=Cucumis melo OX=3656 GN=LOC10350158...	[more]
tr\|A0A0A0L7M8\|A0A0A0L7M8_CUCSA	1.3e-54	95.54	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G077610 PE=4 SV=1	[more]
tr\|A0A2P5F2H3\|A0A2P5F2H3_9ROSA	1.0e-51	91.07	Eukaryotic translation initiation factor SUI OS=Trema orientalis OX=63057 GN=Tor...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006413	translational initiation

Vocabulary: **Molecular Function**
Term	Definition
GO:0003743	translation initiation factor activity

Vocabulary: **INTERPRO**
Term	Definition
IPR036877	SUI1_dom_sf
IPR001950	SUI1
IPR005874	SUI1_euk

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006413	translational initiation
biological_process	GO:0006446	regulation of translational initiation
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003743	translation initiation factor activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy7G009290.1	CsGy7G009290.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005874	Eukaryotic translation initiation factor SUI1	PIRSF	PIRSF004499	Transl_init_SUI1_Euk	coord: 1..112 e-value: 2.6E-47 score: 157.7
IPR005874	Eukaryotic translation initiation factor SUI1	TIGRFAM	TIGR01160	TIGR01160	coord: 7..112 e-value: 1.2E-52 score: 175.0
IPR005874	Eukaryotic translation initiation factor SUI1	CDD	cd11566	eIF1_SUI1	coord: 28..111 e-value: 3.57042E-46 score: 144.985
IPR001950	SUI1 domain	PFAM	PF01253	SUI1	coord: 27..100 e-value: 7.1E-24 score: 84.0
IPR001950	SUI1 domain	PROSITE	PS50296	SUI1	coord: 30..100 score: 22.77
None	No IPR available	GENE3D	G3DSA:3.30.780.10		coord: 2..112 e-value: 1.1E-45 score: 157.0
None	No IPR available	PANTHER	PTHR10388	EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1	coord: 1..112
None	No IPR available	PANTHER	PTHR10388:SF36	SUBFAMILY NOT NAMED	coord: 1..112
IPR036877	SUI1 domain superfamily	SUPERFAMILY	SSF55159	eIF1-like	coord: 4..112

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy7G009290	Cla016325	Watermelon (97103) v1	cgybwmB519
CsGy7G009290	Csa7G209580	Cucumber (Chinese Long) v2	cgybcuB323
CsGy7G009290	MELO3C013163	Melon (DHL92) v3.5.1	cgybmeB472
CsGy7G009290	ClCG09G010810	Watermelon (Charleston Gray)	cgybwcgB477
CsGy7G009290	CSPI07G09790	Wild cucumber (PI 183967)	cgybcpiB331
CsGy7G009290	CmaCh09G009550	Cucurbita maxima (Rimu)	cgybcmaB882
CsGy7G009290	CmaCh01G011290	Cucurbita maxima (Rimu)	cgybcmaB939
CsGy7G009290	CmoCh01G011800	Cucurbita moschata (Rifu)	cgybcmoB922
CsGy7G009290	CmoCh09G009530	Cucurbita moschata (Rifu)	cgybcmoB864
CsGy7G009290	Lsi02G019030	Bottle gourd (USVL1VR-Ls)	cgyblsiB478
CsGy7G009290	Cp4.1LG06g08880	Cucurbita pepo (Zucchini)	cgybcpeB979
CsGy7G009290	Cp4.1LG02g01050	Cucurbita pepo (Zucchini)	cgybcpeB945
CsGy7G009290	MELO3C013163.2	Melon (DHL92) v3.6.1	cgybmedB469
CsGy7G009290	CsaV3_7G021830	Cucumber (Chinese Long) v3	cgybcucB347
CsGy7G009290	Cla97C09G173550	Watermelon (97103) v2	cgybwmbB534
CsGy7G009290	Bhi09G001377	Wax gourd	cgybwgoB661
CsGy7G009290	Carg12823	Silver-seed gourd	carcgybB0893

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None