Carg05625 (gene) Silver-seed gourd

Overview
NameCarg05625
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionProtein translation factor SUI1-like protein
LocationCucurbita_argyrosperma_scaffold_033 : 3077 .. 4375 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCGAGAACAATCCTGACCCCATTCGGATGCGAATTCGTGATGGAAACATACGGATTCTTGCCGCGTTCCCCAAAATCTCTATAAATAATCCCTATACCGCTGAGCGTTGGTCGCATCATTCGTTGTCCGTTCTCTGTTCTTCAGTACCCTCTCGTAAGTCTTTGATCCTTTCTGAATAGTTGAATCAGTTCTTTTTTATTCTCATTGTTAGCTCTACTTTAACTTGTGTTCCTGTTTTTGTTGCTGGATTTATCTTTTTGCTACTTTGATTTGTGGTTTATGCTCATTTGACTTGATGATTTGATGATCGTCGTTGGGAGATTTCTGTTTAGATTGGATTTTAGTTTGTATCGGCCGGATTCTCGTCTTGCTTGAAACGATTCTGTTGTTGCGTTCTTTATTGAAGTCGTGGATGATCTACGGTTTTTCTTTCTGGATTCGTTTTGTTGTTTGAGTATTTGGTTAGATGATCGAGGAGATTCATCGTTCTGGATTCTTGTCCTGTTGTTCTCTTCATGTTTAGGTTGGGTCTTAGTTTGTATCGGCCGGATTCTCGTCTTGCTTGTTTAGATTCTGTTGTTCGGTTCGTTTATTGAAGTCATGGATGATCTAGGGTTTTTCTTTCTGGATTCTTTGTTTTGTTGTTTGAGCTTTAGGTTTTATGAGTATATGGTTAGGTGATCGTCAGAAGATTCATCGTTGTTCTCTTCATCTGTTCAAGTGTTTTCTTATACTAACAACCGTTTAATCCGGCCAATGGATGAACAAGGGATTTGTTCTTGTTCATTGGTATTGATTGTATCTGATCCGCTTTGGGGTTTCGATTGATTGGAAGCCATTGATTGTGGGAGTTGGCGTTTAAAGATAAGCCAAGGCTTACTTCTATCCATATTGATTTTGATATCTATGTTGTGTTCCAGATTGTGGGTGTTCGAGTTTTGATCCAAACAAGGTTGATGGTTGAAATAGACGTCCAAATCCCATCTGCTTACGATCCATTCGCAGACGCCAAGGATTCCGATGCCCCGGGAGGCAAAGAGTATGTTCATATCCGCGTGCAGCAGAGGAATGGCAAGAAGTGCTTGACAACAGTCCAGGGTCTGAAGAAGGATTTCAGCTACGAGAAGATCCTCAAAGACGTGAAGAAGGAGTTTTGCTGTAATGGTAACGTCGTCCAAGACAAAGAATTGGGGAAGATAATTCAGCTTCAGGGCGATCAGCGCAAGAACGTGTCTCAGTTCCTGGTTCAGGCTGGGATTGTTAAGAAGGATCAGATCAAAATCCATGGATTTTAA

mRNA sequence

ATGTTCGAGAACAATCCTGACCCCATTCGGATGCGAATTCGTGATGGAAACATACGGATTCTTGCCGCGTTCCCCAAAATCTCTATAAATAATCCCTATACCGCTGAGCGTTGGTCGCATCATTCGTTGTCCGTTCTCTGTTCTTCAGTACCCTCTCTCGTGGATGATCTACGGTTGGGTCTTAGTTTGTATCGGCCGGATTCTCGTCTTGCTTGTTTAGATTCTGTTGTTCGGTTTTATGAGTATATGATTGTGGGTGTTCGAGTTTTGATCCAAACAAGGTTGATGGTTGAAATAGACGTCCAAATCCCATCTGCTTACGATCCATTCGCAGACGCCAAGGATTCCGATGCCCCGGGAGGCAAAGAGTATGTTCATATCCGCGTGCAGCAGAGGAATGGCAAGAAGTGCTTGACAACAGTCCAGGGTCTGAAGAAGGATTTCAGCTACGAGAAGATCCTCAAAGACGTGAAGAAGGAGTTTTGCTGTAATGGTAACGTCGTCCAAGACAAAGAATTGGGGAAGATAATTCAGCTTCAGGGCGATCAGCGCAAGAACGTGTCTCAGTTCCTGGTTCAGGCTGGGATTGTTAAGAAGGATCAGATCAAAATCCATGGATTTTAA

Coding sequence (CDS)

ATGTTCGAGAACAATCCTGACCCCATTCGGATGCGAATTCGTGATGGAAACATACGGATTCTTGCCGCGTTCCCCAAAATCTCTATAAATAATCCCTATACCGCTGAGCGTTGGTCGCATCATTCGTTGTCCGTTCTCTGTTCTTCAGTACCCTCTCTCGTGGATGATCTACGGTTGGGTCTTAGTTTGTATCGGCCGGATTCTCGTCTTGCTTGTTTAGATTCTGTTGTTCGGTTTTATGAGTATATGATTGTGGGTGTTCGAGTTTTGATCCAAACAAGGTTGATGGTTGAAATAGACGTCCAAATCCCATCTGCTTACGATCCATTCGCAGACGCCAAGGATTCCGATGCCCCGGGAGGCAAAGAGTATGTTCATATCCGCGTGCAGCAGAGGAATGGCAAGAAGTGCTTGACAACAGTCCAGGGTCTGAAGAAGGATTTCAGCTACGAGAAGATCCTCAAAGACGTGAAGAAGGAGTTTTGCTGTAATGGTAACGTCGTCCAAGACAAAGAATTGGGGAAGATAATTCAGCTTCAGGGCGATCAGCGCAAGAACGTGTCTCAGTTCCTGGTTCAGGCTGGGATTGTTAAGAAGGATCAGATCAAAATCCATGGATTTTAA

Protein sequence

MFENNPDPIRMRIRDGNIRILAAFPKISINNPYTAERWSHHSLSVLCSSVPSLVDDLRLGLSLYRPDSRLACLDSVVRFYEYMIVGVRVLIQTRLMVEIDVQIPSAYDPFADAKDSDAPGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGIVKKDQIKIHGF
Homology
[Close]
BLAST of Carg05625 vs. NCBI nr
Match: XP_022940170.1 (protein translation factor SUI1 homolog 2-like [Cucurbita moschata] >XP_022981656.1 protein translation factor SUI1 homolog 2-like [Cucurbita maxima] >XP_022981658.1 protein translation factor SUI1 homolog 2-like [Cucurbita maxima] >XP_023525155.1 protein translation factor SUI1 homolog 2-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023525156.1 protein translation factor SUI1 homolog 2-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_023525157.1 protein translation factor SUI1 homolog 2-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 228.4 bits (581), Expect = 2.2e-56
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0 

Query: 96  MVEIDVQIPSAYDPFADAKDSDAPGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILK 155
           MVEIDVQIPSAYDPFADAKDSDAPGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILK
Sbjct: 1   MVEIDVQIPSAYDPFADAKDSDAPGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILK 60

Query: 156 DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGIVKKDQIKIHGF 208
           DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGIVKKDQIKIHGF
Sbjct: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGIVKKDQIKIHGF 112

[Close]
BLAST of Carg05625 vs. NCBI nr
Match: XP_004139787.1 (PREDICTED: protein translation factor SUI1 homolog 1-like [Cucumis sativus] >XP_008447738.1 PREDICTED: protein translation factor SUI1 homolog 1-like [Cucumis melo] >XP_011658975.1 PREDICTED: protein translation factor SUI1 homolog 1-like [Cucumis sativus] >KGN44162.1 hypothetical protein Csa_7G209580 [Cucumis sativus])

HSP 1 Score: 218.8 bits (556), Expect = 1.8e-53
Identity = 106/112 (94.64%), Postives = 110/112 (98.21%), Query Frame = 0 

Query: 96  MVEIDVQIPSAYDPFADAKDSDAPGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILK 155
           MVE+D QIPSA+DPFADAKDSDAPG KEYVHIRVQQRNGKKCLTTVQGLKK+FSYEKILK
Sbjct: 1   MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60

Query: 156 DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGIVKKDQIKIHGF 208
           DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAG+VKKDQIKIHGF
Sbjct: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

[Close]
BLAST of Carg05625 vs. NCBI nr
Match: XP_022976609.1 (protein translation factor SUI1 homolog 1 [Cucurbita maxima] >XP_022976610.1 protein translation factor SUI1 homolog 1 [Cucurbita maxima])

HSP 1 Score: 216.5 bits (550), Expect = 8.7e-53
Identity = 105/112 (93.75%), Postives = 109/112 (97.32%), Query Frame = 0 

Query: 96  MVEIDVQIPSAYDPFADAKDSDAPGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILK 155
           MVE+D QIPSA+DPFADAKDSDAPG K YVHIRVQQRNGKKCLTTVQGLKK+FSYEKILK
Sbjct: 1   MVELDFQIPSAFDPFADAKDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60

Query: 156 DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGIVKKDQIKIHGF 208
           DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAG+VKKDQIKIHGF
Sbjct: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

[Close]
BLAST of Carg05625 vs. NCBI nr
Match: XP_011650527.1 (PREDICTED: protein translation factor SUI1 homolog 2-like [Cucumis sativus] >XP_016903023.1 PREDICTED: protein translation factor SUI1 homolog 2 [Cucumis melo] >KGN56126.1 hypothetical protein Csa_3G077610 [Cucumis sativus])

HSP 1 Score: 216.1 bits (549), Expect = 1.1e-52
Identity = 103/112 (91.96%), Postives = 111/112 (99.11%), Query Frame = 0 

Query: 96  MVEIDVQIPSAYDPFADAKDSDAPGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILK 155
           MV++DVQIPSA+DPFADAKDSDAPG KEYVHIRVQQRNGKKCLTTVQGLKK+FSY+KILK
Sbjct: 1   MVDLDVQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK 60

Query: 156 DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGIVKKDQIKIHGF 208
           D+KK+FCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAG+VKKDQIKIHGF
Sbjct: 61  DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

[Close]
BLAST of Carg05625 vs. NCBI nr
Match: XP_022139784.1 (protein translation factor SUI1 homolog 1-like [Momordica charantia])

HSP 1 Score: 215.7 bits (548), Expect = 1.5e-52
Identity = 103/112 (91.96%), Postives = 110/112 (98.21%), Query Frame = 0 

Query: 96  MVEIDVQIPSAYDPFADAKDSDAPGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILK 155
           MVE+D++IPSA+DPFA+A+DSDAPG KEYVHIRVQQRNGKKCLTTVQGLKK FSYEKILK
Sbjct: 1   MVELDLEIPSAFDPFAEARDSDAPGNKEYVHIRVQQRNGKKCLTTVQGLKKQFSYEKILK 60

Query: 156 DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGIVKKDQIKIHGF 208
           DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAG+VKKDQIKIHGF
Sbjct: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

[Close]
BLAST of Carg05625 vs. TAIR10
Match: AT5G54940.1 (Translation initiation factor SUI1 family protein)

HSP 1 Score: 203.8 bits (517), Expect = 1.1e-52
Identity = 96/112 (85.71%), Postives = 106/112 (94.64%), Query Frame = 0 

Query: 96  MVEIDVQIPSAYDPFADAKDSDAPGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILK 155
           MVE+D+QIPSAYDPFA+AKDSDAPG KE +HIR+QQRNGKK LTTVQGLKK++SYE+ILK
Sbjct: 1   MVELDIQIPSAYDPFAEAKDSDAPGAKENIHIRIQQRNGKKSLTTVQGLKKEYSYERILK 60

Query: 156 DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGIVKKDQIKIHGF 208
           D+KK+FCCNGNVVQDKELGKIIQLQGDQRK VSQFLVQ GI KKDQIKIHGF
Sbjct: 61  DLKKDFCCNGNVVQDKELGKIIQLQGDQRKKVSQFLVQTGIAKKDQIKIHGF 112

[Close]
BLAST of Carg05625 vs. TAIR10
Match: AT1G54290.1 (Translation initiation factor SUI1 family protein)

HSP 1 Score: 179.5 bits (454), Expect = 2.1e-45
Identity = 86/113 (76.11%), Postives = 100/113 (88.50%), Query Frame = 0 

Query: 96  MVEIDVQIPSAYDPFADAKDSDAPGG-KEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKIL 155
           M +++VQ+P+A+DPFADA   D+  G KEYVHIRVQQRNG+K LTTVQGLKK++SY KIL
Sbjct: 1   MSDLEVQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYSKIL 60

Query: 156 KDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGIVKKDQIKIHGF 208
           KD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLVQAG+VKKD IKIHGF
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113

[Close]
BLAST of Carg05625 vs. TAIR10
Match: AT4G27130.1 (Translation initiation factor SUI1 family protein)

HSP 1 Score: 179.5 bits (454), Expect = 2.1e-45
Identity = 87/113 (76.99%), Postives = 99/113 (87.61%), Query Frame = 0 

Query: 96  MVEIDVQIPSAYDPFADAKDSDAPGG-KEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKIL 155
           M E+D Q+P+A+DPFADA   D+  G KEYVHIRVQQRNG+K LTTVQGLKK++SY KIL
Sbjct: 1   MSELDSQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKIL 60

Query: 156 KDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGIVKKDQIKIHGF 208
           KD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLVQAG+VKKD IKIHGF
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113

[Close]
BLAST of Carg05625 vs. TAIR10
Match: AT5G54760.1 (Translation initiation factor SUI1 family protein)

HSP 1 Score: 179.1 bits (453), Expect = 2.8e-45
Identity = 87/113 (76.99%), Postives = 99/113 (87.61%), Query Frame = 0 

Query: 96  MVEIDVQIPSAYDPFADAKDSDAPGG-KEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKIL 155
           M E+D Q+P+A+DPFADA   D+  G KEYVHIRVQQRNG+K LTTVQGLKK++SY KIL
Sbjct: 1   MSELDSQVPTAFDPFADANVEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKIL 60

Query: 156 KDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGIVKKDQIKIHGF 208
           KD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLVQAG+VKKD IKIHGF
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113

[Close]
BLAST of Carg05625 vs. Swiss-Prot
Match: sp|P41568|SUI11_ARATH (Protein translation factor SUI1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At4g27130 PE=1 SV=2)

HSP 1 Score: 179.5 bits (454), Expect = 3.9e-44
Identity = 87/113 (76.99%), Postives = 99/113 (87.61%), Query Frame = 0 

Query: 96  MVEIDVQIPSAYDPFADAKDSDAPGG-KEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKIL 155
           M E+D Q+P+A+DPFADA   D+  G KEYVHIRVQQRNG+K LTTVQGLKK++SY KIL
Sbjct: 1   MSELDSQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKIL 60

Query: 156 KDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGIVKKDQIKIHGF 208
           KD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLVQAG+VKKD IKIHGF
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113

[Close]
BLAST of Carg05625 vs. Swiss-Prot
Match: sp|Q94JV4|SUI12_ARATH (Protein translation factor SUI1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1g54290 PE=3 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 3.9e-44
Identity = 86/113 (76.11%), Postives = 100/113 (88.50%), Query Frame = 0 

Query: 96  MVEIDVQIPSAYDPFADAKDSDAPGG-KEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKIL 155
           M +++VQ+P+A+DPFADA   D+  G KEYVHIRVQQRNG+K LTTVQGLKK++SY KIL
Sbjct: 1   MSDLEVQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYSKIL 60

Query: 156 KDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGIVKKDQIKIHGF 208
           KD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLVQAG+VKKD IKIHGF
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113

[Close]
BLAST of Carg05625 vs. Swiss-Prot
Match: sp|P56330|SUI1_MAIZE (Protein translation factor SUI1 homolog OS=Zea mays OX=4577 GN=TIF PE=3 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 6.6e-44
Identity = 85/115 (73.91%), Postives = 100/115 (86.96%), Query Frame = 0 

Query: 96  MVEIDVQIPSAYDPFADAKDSD---APGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEK 155
           M ++D+QIP+A+DPFA+A   D   A G K+YVH+R+QQRNG+K LTTVQGLKK+FSY K
Sbjct: 1   MSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYSK 60

Query: 156 ILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGIVKKDQIKIHGF 208
           ILKD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLVQAGIVKK+ IKIHGF
Sbjct: 61  ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115

[Close]
BLAST of Carg05625 vs. Swiss-Prot
Match: sp|A6MZM2|SUI1_ORYSI (Protein translation factor SUI1 homolog OS=Oryza sativa subsp. indica OX=39946 GN=GOS2 PE=2 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 6.6e-44
Identity = 85/115 (73.91%), Postives = 100/115 (86.96%), Query Frame = 0 

Query: 96  MVEIDVQIPSAYDPFADAKDSD---APGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEK 155
           M ++D+QIP+A+DPFA+A   D   A G K+YVH+R+QQRNG+K LTTVQGLKK+FSY K
Sbjct: 1   MSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNK 60

Query: 156 ILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGIVKKDQIKIHGF 208
           ILKD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLVQAGIVKK+ IKIHGF
Sbjct: 61  ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115

[Close]
BLAST of Carg05625 vs. Swiss-Prot
Match: sp|Q0D5W6|SUI1_ORYSJ (Protein translation factor SUI1 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=GOS2 PE=3 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 6.6e-44
Identity = 85/115 (73.91%), Postives = 100/115 (86.96%), Query Frame = 0 

Query: 96  MVEIDVQIPSAYDPFADAKDSD---APGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEK 155
           M ++D+QIP+A+DPFA+A   D   A G K+YVH+R+QQRNG+K LTTVQGLKK+FSY K
Sbjct: 1   MSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNK 60

Query: 156 ILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGIVKKDQIKIHGF 208
           ILKD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLVQAGIVKK+ IKIHGF
Sbjct: 61  ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115

[Close]
BLAST of Carg05625 vs. TrEMBL
Match: tr|A0A1S3BI45|A0A1S3BI45_CUCME (protein translation factor SUI1 homolog 1-like OS=Cucumis melo OX=3656 GN=LOC103490142 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 1.2e-53
Identity = 106/112 (94.64%), Postives = 110/112 (98.21%), Query Frame = 0 

Query: 96  MVEIDVQIPSAYDPFADAKDSDAPGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILK 155
           MVE+D QIPSA+DPFADAKDSDAPG KEYVHIRVQQRNGKKCLTTVQGLKK+FSYEKILK
Sbjct: 1   MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60

Query: 156 DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGIVKKDQIKIHGF 208
           DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAG+VKKDQIKIHGF
Sbjct: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

[Close]
BLAST of Carg05625 vs. TrEMBL
Match: tr|A0A0A0K771|A0A0A0K771_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G209580 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 1.2e-53
Identity = 106/112 (94.64%), Postives = 110/112 (98.21%), Query Frame = 0 

Query: 96  MVEIDVQIPSAYDPFADAKDSDAPGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILK 155
           MVE+D QIPSA+DPFADAKDSDAPG KEYVHIRVQQRNGKKCLTTVQGLKK+FSYEKILK
Sbjct: 1   MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60

Query: 156 DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGIVKKDQIKIHGF 208
           DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAG+VKKDQIKIHGF
Sbjct: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

[Close]
BLAST of Carg05625 vs. TrEMBL
Match: tr|A0A1S4E468|A0A1S4E468_CUCME (protein translation factor SUI1 homolog 2 OS=Cucumis melo OX=3656 GN=LOC103501585 PE=4 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 7.5e-53
Identity = 103/112 (91.96%), Postives = 111/112 (99.11%), Query Frame = 0 

Query: 96  MVEIDVQIPSAYDPFADAKDSDAPGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILK 155
           MV++DVQIPSA+DPFADAKDSDAPG KEYVHIRVQQRNGKKCLTTVQGLKK+FSY+KILK
Sbjct: 1   MVDLDVQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK 60

Query: 156 DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGIVKKDQIKIHGF 208
           D+KK+FCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAG+VKKDQIKIHGF
Sbjct: 61  DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

[Close]
BLAST of Carg05625 vs. TrEMBL
Match: tr|A0A0A0L7M8|A0A0A0L7M8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G077610 PE=4 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 7.5e-53
Identity = 103/112 (91.96%), Postives = 111/112 (99.11%), Query Frame = 0 

Query: 96  MVEIDVQIPSAYDPFADAKDSDAPGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILK 155
           MV++DVQIPSA+DPFADAKDSDAPG KEYVHIRVQQRNGKKCLTTVQGLKK+FSY+KILK
Sbjct: 1   MVDLDVQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK 60

Query: 156 DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGIVKKDQIKIHGF 208
           D+KK+FCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAG+VKKDQIKIHGF
Sbjct: 61  DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

[Close]
BLAST of Carg05625 vs. TrEMBL
Match: tr|A0A2P5F2H3|A0A2P5F2H3_9ROSA (Eukaryotic translation initiation factor SUI OS=Trema orientalis OX=63057 GN=TorRG33x02_123180 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 1.4e-51
Identity = 100/116 (86.21%), Postives = 111/116 (95.69%), Query Frame = 0 

Query: 92  QTRLMVEIDVQIPSAYDPFADAKDSDAPGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYE 151
           Q + MVE+DVQIPSA+DPFA+AKDSDAPG KEYVHIRVQQRNGKKCLTTVQGLK+++SYE
Sbjct: 32  QAKYMVELDVQIPSAFDPFAEAKDSDAPGAKEYVHIRVQQRNGKKCLTTVQGLKQEYSYE 91

Query: 152 KILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGIVKKDQIKIHGF 208
           +ILKD+K+ FCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAG+VKKD IKIHGF
Sbjct: 92  RILKDLKRVFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDHIKIHGF 147

The following BLAST results are available for this feature:
BLAST of Carg05625 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022940170.12.2e-56100.00protein translation factor SUI1 homolog 2-like [Cucurbita moschata] >XP_02298165... [more]
XP_004139787.11.8e-5394.64PREDICTED: protein translation factor SUI1 homolog 1-like [Cucumis sativus] >XP_... [more]
XP_022976609.18.7e-5393.75protein translation factor SUI1 homolog 1 [Cucurbita maxima] >XP_022976610.1 pro... [more]
XP_011650527.11.1e-5291.96PREDICTED: protein translation factor SUI1 homolog 2-like [Cucumis sativus] >XP_... [more]
XP_022139784.11.5e-5291.96protein translation factor SUI1 homolog 1-like [Momordica charantia][more]
BLAST of Carg05625 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G54940.11.1e-5285.71Translation initiation factor SUI1 family protein[more]
AT1G54290.12.1e-4576.11Translation initiation factor SUI1 family protein[more]
AT4G27130.12.1e-4576.99Translation initiation factor SUI1 family protein[more]
AT5G54760.12.8e-4576.99Translation initiation factor SUI1 family protein[more]
BLAST of Carg05625 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P41568|SUI11_ARATH3.9e-4476.99Protein translation factor SUI1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At4... [more]
sp|Q94JV4|SUI12_ARATH3.9e-4476.11Protein translation factor SUI1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1... [more]
sp|P56330|SUI1_MAIZE6.6e-4473.91Protein translation factor SUI1 homolog OS=Zea mays OX=4577 GN=TIF PE=3 SV=1[more]
sp|A6MZM2|SUI1_ORYSI6.6e-4473.91Protein translation factor SUI1 homolog OS=Oryza sativa subsp. indica OX=39946 G... [more]
sp|Q0D5W6|SUI1_ORYSJ6.6e-4473.91Protein translation factor SUI1 homolog OS=Oryza sativa subsp. japonica OX=39947... [more]
BLAST of Carg05625 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BI45|A0A1S3BI45_CUCME1.2e-5394.64protein translation factor SUI1 homolog 1-like OS=Cucumis melo OX=3656 GN=LOC103... [more]
tr|A0A0A0K771|A0A0A0K771_CUCSA1.2e-5394.64Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G209580 PE=4 SV=1[more]
tr|A0A1S4E468|A0A1S4E468_CUCME7.5e-5391.96protein translation factor SUI1 homolog 2 OS=Cucumis melo OX=3656 GN=LOC10350158... [more]
tr|A0A0A0L7M8|A0A0A0L7M8_CUCSA7.5e-5391.96Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G077610 PE=4 SV=1[more]
tr|A0A2P5F2H3|A0A2P5F2H3_9ROSA1.4e-5186.21Eukaryotic translation initiation factor SUI OS=Trema orientalis OX=63057 GN=Tor... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006413translational initiation
Vocabulary: Molecular Function
TermDefinition
GO:0003743translation initiation factor activity
Vocabulary: INTERPRO
TermDefinition
IPR036877SUI1_dom_sf
IPR001950SUI1
IPR005874SUI1_euk
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006446 regulation of translational initiation
biological_process GO:0006413 translational initiation
cellular_component GO:0005840 ribosome
molecular_function GO:0003743 translation initiation factor activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg05625-RACarg05625-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:3.30.780.10coord: 90..207
e-value: 6.4E-45
score: 154.4
NoneNo IPR availablePANTHERPTHR10388:SF36SUBFAMILY NOT NAMEDcoord: 96..207
NoneNo IPR availablePANTHERPTHR10388EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1coord: 96..207
IPR005874Eukaryotic translation initiation factor SUI1TIGRFAMTIGR01160TIGR01160coord: 100..207
e-value: 1.5E-50
score: 168.4
IPR005874Eukaryotic translation initiation factor SUI1CDDcd11566eIF1_SUI1coord: 123..206
e-value: 5.63564E-50
score: 158.467
IPR001950SUI1 domainPFAMPF01253SUI1coord: 122..196
e-value: 3.4E-23
score: 81.9
IPR001950SUI1 domainPROSITEPS50296SUI1coord: 125..195
score: 22.878
IPR036877SUI1 domain superfamilySUPERFAMILYSSF55159eIF1-likecoord: 97..207

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg05625CmaCh09G009550Cucurbita maxima (Rimu)carcmaB1407
Carg05625CmaCh01G011290Cucurbita maxima (Rimu)carcmaB1410
Carg05625CmoCh09G009530Cucurbita moschata (Rifu)carcmoB1364
Carg05625CmoCh01G011800Cucurbita moschata (Rifu)carcmoB1367
Carg05625Cp4.1LG02g01050Cucurbita pepo (Zucchini)carcpeB1420
Carg05625Cp4.1LG06g08880Cucurbita pepo (Zucchini)carcpeB1422
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg05625Carg12823Silver-seed gourdcarcarB641
The following block(s) are covering this gene:

None