Cp4.1LG01g24760 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g24760
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionCyclin-dependent protein kinase inhibitor Siamese
LocationCp4.1LG01 : 18779102 .. 18779476 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCATGGACCTTGAATTTCCTGAAAATCTCCCTAAAATCCGCCTTCCTTTACAGGTTCGATCGCCTCCTAAGCCTTCCAATTCCATCAACATCCCTTCCTCCGTCTCCGATCACGACGGCGCCGACCTTGACCACCGCGGCTGCCGGACGCCGACCTCTGCTGAGCACAAGATTCCGAAGATCATCAGCTGTCCTGGAGCGCCGAGGAAGCCGAAGCGTCCTCCCGTACCTTGCAAGAGGAAGTTGACCATGGAGCTCAAATTCTTTGAGTTCGTGAATCAAGAAGAAGTCGATAATTTCTTCCGATCCGCTTACGATCTCGAAGCTTCTTCCACGGCGCCGCCGAAGAGGAGCTGCTGCCGGTCAGCCTGA

mRNA sequence

ATGTCCATGGACCTTGAATTTCCTGAAAATCTCCCTAAAATCCGCCTTCCTTTACAGGTTCGATCGCCTCCTAAGCCTTCCAATTCCATCAACATCCCTTCCTCCGTCTCCGATCACGACGGCGCCGACCTTGACCACCGCGGCTGCCGGACGCCGACCTCTGCTGAGCACAAGATTCCGAAGATCATCAGCTGTCCTGGAGCGCCGAGGAAGCCGAAGCGTCCTCCCGTACCTTGCAAGAGGAAGTTGACCATGGAGCTCAAATTCTTTGAGTTCGTGAATCAAGAAGAAGTCGATAATTTCTTCCGATCCGCTTACGATCTCGAAGCTTCTTCCACGGCGCCGCCGAAGAGGAGCTGCTGCCGGTCAGCCTGA

Coding sequence (CDS)

ATGTCCATGGACCTTGAATTTCCTGAAAATCTCCCTAAAATCCGCCTTCCTTTACAGGTTCGATCGCCTCCTAAGCCTTCCAATTCCATCAACATCCCTTCCTCCGTCTCCGATCACGACGGCGCCGACCTTGACCACCGCGGCTGCCGGACGCCGACCTCTGCTGAGCACAAGATTCCGAAGATCATCAGCTGTCCTGGAGCGCCGAGGAAGCCGAAGCGTCCTCCCGTACCTTGCAAGAGGAAGTTGACCATGGAGCTCAAATTCTTTGAGTTCGTGAATCAAGAAGAAGTCGATAATTTCTTCCGATCCGCTTACGATCTCGAAGCTTCTTCCACGGCGCCGCCGAAGAGGAGCTGCTGCCGGTCAGCCTGA

Protein sequence

MSMDLEFPENLPKIRLPLQVRSPPKPSNSINIPSSVSDHDGADLDHRGCRTPTSAEHKIPKIISCPGAPRKPKRPPVPCKRKLTMELKFFEFVNQEEVDNFFRSAYDLEASSTAPPKRSCCRSA
Homology
[Close]
BLAST of Cp4.1LG01g24760 vs. Swiss-Prot
Match: SMR1_ARATH (Cyclin-dependent protein kinase inhibitor SMR1 OS=Arabidopsis thaliana GN=SMR1 PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 3.7e-10
Identity = 51/132 (38.64%), Postives = 66/132 (50.00%), Query Frame = 1 

Query: 3   MDLEFPENLPKIRLPLQVRSPPKPSNSINIPSSVSDHDGADLDHRGCRTPTSAEHKIPKI 62
           MDLE  ++L K   P  ++   K S +        D    D D   C TPTS EHKIP +
Sbjct: 1   MDLELLQDLSKFNFPTPIKIRSKTSKT------KKDEGDDDEDDLRCSTPTSQEHKIPAV 60

Query: 63  I-SCPGAPRKPKRPPV-----------PCKRKL---TMELKFFEFVNQEEVDNFFRSAYD 120
           + S P  PRKP+ PP             CKRKL   T E+     +N+EE+D FF S Y+
Sbjct: 61  VDSPPPPPRKPRPPPSAPSATAALMIRSCKRKLLVSTCEI----IMNREEIDRFFSSVYN 120

[Close]
BLAST of Cp4.1LG01g24760 vs. Swiss-Prot
Match: SIM_ARATH (Cyclin-dependent protein kinase inhibitor SIM OS=Arabidopsis thaliana GN=SIM PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 5.8e-08
Identity = 39/121 (32.23%), Postives = 60/121 (49.59%), Query Frame = 1 

Query: 3   MDLEFPENLPKIRLPLQVRSPPKPSNSINIPSSVSDHDGADLDHRGCRTPTSAEHKIPKI 62
           MDL+  ++LP +  P  ++              +  +   D D  GC TPTS++HKIP  
Sbjct: 1   MDLDLIQDLPILNFPPAIK--------------IRANTNRDDDGGGCTTPTSSDHKIPPT 60

Query: 63  ISC--PGAPRKPKRPPVP-------CKRKLTMELKFFE-FVNQEEVDNFFRSAYDLEASS 114
            +   P  P+KP+ P  P       CKRKL   L  +E  VN++E++ FF S Y+   +S
Sbjct: 61  TATTPPPPPQKPRPPSTPSSLGIRSCKRKLMTSLSKYEIIVNKDEIERFFSSVYNQTMAS 107

[Close]
BLAST of Cp4.1LG01g24760 vs. TrEMBL
Match: A0A0A0LSQ6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G384460 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 4.6e-52
Identity = 107/122 (87.70%), Postives = 112/122 (91.80%), Query Frame = 1 

Query: 1   MSMDLEFPENLPKIRLPLQVRSPPKPSNSINIPSSVSDHDGADLDHRGCRTPTSAEHKIP 60
           MSMDLEFP+NLPKIRLPLQVRSPPKPS S NI  S SDHD +DLD R CRTPTSAEHKIP
Sbjct: 1   MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNIIPS-SDHD-SDLDRRSCRTPTSAEHKIP 60

Query: 61  KIISCPGAPRKPKRPPVPCKRKLTMELKFFEFVNQEEVDNFFRSAYDLEASSTAPPKRSC 120
           KI+SCPGAP+KPKRPPVPCKRKLTMELKFFE VNQEEVDNFFRSAYDLE+S TAPPKRSC
Sbjct: 61  KILSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDNFFRSAYDLESSPTAPPKRSC 120

Query: 121 CR 123
           CR
Sbjct: 121 CR 120

[Close]
BLAST of Cp4.1LG01g24760 vs. TrEMBL
Match: W9S397_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_001720 PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 3.3e-18
Identity = 66/143 (46.15%), Postives = 87/143 (60.84%), Query Frame = 1 

Query: 1   MSMDLEFPENLPKIRL-PLQVRSPPKPSNSI--------------------NIPSSVSDH 60
           MS DLEF + LPKIRL P+Q+++P +PS S                     NI +    +
Sbjct: 1   MSTDLEFCQALPKIRLSPIQIQTP-EPSESKTEAARSIIQRLDNDRRNSCDNIKNEDIIY 60

Query: 61  DGADLDHRGCRTPTSAEHKIPKIISCPGAPRKPKRPPVP-CKRKLTMELKFFEFVNQEEV 120
           +  +  +  CRTPTSAEH+IP I+SCP APRKP     P CKRKL+ EL FF+ VN+EE+
Sbjct: 61  EEKEEINNECRTPTSAEHRIPAILSCPPAPRKPATARAPSCKRKLS-ELDFFDVVNREEI 120

Query: 121 DNFFRSAYDLEASSTAPPKRSCC 122
           D FFRS++   A+ +A  KRSCC
Sbjct: 121 DRFFRSSFAKAATGSA--KRSCC 139

[Close]
BLAST of Cp4.1LG01g24760 vs. TrEMBL
Match: M5X1M1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013617mg PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 4.5e-15
Identity = 55/121 (45.45%), Postives = 73/121 (60.33%), Query Frame = 1 

Query: 1   MSMDLEFPENLPKIRLPLQVRSPPKPSNSINIPSSVSDHDGADLDHRGCRTPTSAEHKIP 60
           M+  L+F ++LP  R      S PK       P S+ DHD  D    GCRTPTS EHKIP
Sbjct: 1   MATGLDFCQDLPNPRFLTIKISTPKAQQ----PLSLHDHDALDEVVHGCRTPTSKEHKIP 60

Query: 61  KIISCPGAPRKP-KRPPVPCKRKLTMELKFFEFVNQEEVDNFFRSAYDLEASSTAPPKRS 120
            +++CP APRKP +R    CKRK    L+FFE  NQ+EV++FFRS++ + + +    KRS
Sbjct: 61  TVVTCPPAPRKPARRAASSCKRK----LQFFETANQDEVEDFFRSSFLINSRA----KRS 109

[Close]
BLAST of Cp4.1LG01g24760 vs. TrEMBL
Match: U5G4W0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s02960g PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 5.9e-15
Identity = 52/120 (43.33%), Postives = 77/120 (64.17%), Query Frame = 1 

Query: 1   MSMDLEFPENLPKIRLPLQVRSPPKPSNSINIPSSVSDHDGADLDHRGCRTPTSAEHKIP 60
           MS DLE  ++LP+I++        +  ++ +   ++   + ++ D   C+TP S EHKIP
Sbjct: 1   MSTDLESRQDLPRIQVRAVKTETLQSCSATDDKETIIKQENSETDD--CQTPKSEEHKIP 60

Query: 61  KIISCPGAPRKPKRPPVPCKRKLTMELKFFEFVNQEEVDNFFRSAYDLEASSTAPPKRSC 120
            ++SCP APRKP+R    CKRKLT EL+FFE VN+EEVD+FF+S+++L       PKR C
Sbjct: 61  AVLSCPPAPRKPRR-SFSCKRKLT-ELEFFEIVNREEVDSFFQSSFEL------LPKRRC 110

[Close]
BLAST of Cp4.1LG01g24760 vs. TrEMBL
Match: A0A067L9G3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01562 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.3e-14
Identity = 54/123 (43.90%), Postives = 75/123 (60.98%), Query Frame = 1 

Query: 1   MSMDLEFPENLPKIRLP---LQVRSPPKPSNSINIPSSVSDHDGADLDHRGCRTPTSAEH 60
           MS DLE  +  P+I++P   ++       S+ + I     + D +D D  GCRTPTS EH
Sbjct: 1   MSADLELRQGSPRIQVPSTKVETLQSCSGSDDVEIRRENGNRD-SDCDD-GCRTPTSEEH 60

Query: 61  KIPKIISCPGAPRKPKRPPVPCKRKLTMELKFFEFVNQEEVDNFFRSAYDLEASSTAPPK 120
           KIP ++SCP APRKP+R P  CKRKL+ E  FF+ V  +EV++ FRS++D     +  PK
Sbjct: 61  KIPAVLSCPPAPRKPRRMP-SCKRKLS-EFDFFQIVKSQEVESLFRSSFD-----SVAPK 114

[Close]
BLAST of Cp4.1LG01g24760 vs. TAIR10
Match: AT3G10525.1 (AT3G10525.1 LOSS OF GIANT CELLS FROM ORGANS)

HSP 1 Score: 65.9 bits (159), Expect = 2.1e-11
Identity = 51/132 (38.64%), Postives = 66/132 (50.00%), Query Frame = 1 

Query: 3   MDLEFPENLPKIRLPLQVRSPPKPSNSINIPSSVSDHDGADLDHRGCRTPTSAEHKIPKI 62
           MDLE  ++L K   P  ++   K S +        D    D D   C TPTS EHKIP +
Sbjct: 1   MDLELLQDLSKFNFPTPIKIRSKTSKT------KKDEGDDDEDDLRCSTPTSQEHKIPAV 60

Query: 63  I-SCPGAPRKPKRPPV-----------PCKRKL---TMELKFFEFVNQEEVDNFFRSAYD 120
           + S P  PRKP+ PP             CKRKL   T E+     +N+EE+D FF S Y+
Sbjct: 61  VDSPPPPPRKPRPPPSAPSATAALMIRSCKRKLLVSTCEI----IMNREEIDRFFSSVYN 120

[Close]
BLAST of Cp4.1LG01g24760 vs. TAIR10
Match: AT5G04470.1 (AT5G04470.1 cyclin-dependent protein kinase inhibitors)

HSP 1 Score: 58.5 bits (140), Expect = 3.3e-09
Identity = 39/121 (32.23%), Postives = 60/121 (49.59%), Query Frame = 1 

Query: 3   MDLEFPENLPKIRLPLQVRSPPKPSNSINIPSSVSDHDGADLDHRGCRTPTSAEHKIPKI 62
           MDL+  ++LP +  P  ++              +  +   D D  GC TPTS++HKIP  
Sbjct: 1   MDLDLIQDLPILNFPPAIK--------------IRANTNRDDDGGGCTTPTSSDHKIPPT 60

Query: 63  ISC--PGAPRKPKRPPVP-------CKRKLTMELKFFE-FVNQEEVDNFFRSAYDLEASS 114
            +   P  P+KP+ P  P       CKRKL   L  +E  VN++E++ FF S Y+   +S
Sbjct: 61  TATTPPPPPQKPRPPSTPSSLGIRSCKRKLMTSLSKYEIIVNKDEIERFFSSVYNQTMAS 107

[Close]
BLAST of Cp4.1LG01g24760 vs. TAIR10
Match: AT5G02420.1 (AT5G02420.1 unknown protein)

HSP 1 Score: 48.9 bits (115), Expect = 2.6e-06
Identity = 35/80 (43.75%), Postives = 46/80 (57.50%), Query Frame = 1 

Query: 9  ENLPKIRLPLQVRSPPKPSNSINIPSSVSDHDGADL-DHRGCRTPTSAEHKIP--KIISC 68
          E++ KIRLP +          ++IP S  DH+   + +  GC+TPTS++HKIP  K   C
Sbjct: 13 EDVEKIRLPTRPE--------LDIPDS--DHEDPTVNEEEGCKTPTSSDHKIPEVKYTLC 72

Query: 69 PGAPRKPK-RPPVPCKRKLT 85
          P APRKPK       KRKLT
Sbjct: 73 PPAPRKPKPNRSSGTKRKLT 82

[Close]
BLAST of Cp4.1LG01g24760 vs. NCBI nr
Match: gi|659113396|ref|XP_008456553.1| (PREDICTED: cyclin-dependent protein kinase inhibitor SMR1-like [Cucumis melo])

HSP 1 Score: 212.6 bits (540), Expect = 3.9e-52
Identity = 107/122 (87.70%), Postives = 113/122 (92.62%), Query Frame = 1 

Query: 1   MSMDLEFPENLPKIRLPLQVRSPPKPSNSINIPSSVSDHDGADLDHRGCRTPTSAEHKIP 60
           MSMDLEFP+NLPKIRLPLQVRSPPKPS S NI  S SDHD +DLD R CRTPTSAEHKIP
Sbjct: 1   MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNIIPS-SDHD-SDLDRRSCRTPTSAEHKIP 60

Query: 61  KIISCPGAPRKPKRPPVPCKRKLTMELKFFEFVNQEEVDNFFRSAYDLEASSTAPPKRSC 120
           KI+SCPGAP+KPKRPPVPCKRKLTMELKFFE VNQEEVDNFFRSAYDLE+SSTAPPKR+C
Sbjct: 61  KILSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDNFFRSAYDLESSSTAPPKRNC 120

Query: 121 CR 123
           CR
Sbjct: 121 CR 120

[Close]
BLAST of Cp4.1LG01g24760 vs. NCBI nr
Match: gi|778672724|ref|XP_011649858.1| (PREDICTED: cyclin-dependent protein kinase inhibitor SMR1 [Cucumis sativus])

HSP 1 Score: 211.8 bits (538), Expect = 6.6e-52
Identity = 107/122 (87.70%), Postives = 112/122 (91.80%), Query Frame = 1 

Query: 1   MSMDLEFPENLPKIRLPLQVRSPPKPSNSINIPSSVSDHDGADLDHRGCRTPTSAEHKIP 60
           MSMDLEFP+NLPKIRLPLQVRSPPKPS S NI  S SDHD +DLD R CRTPTSAEHKIP
Sbjct: 1   MSMDLEFPKNLPKIRLPLQVRSPPKPSLSDNIIPS-SDHD-SDLDRRSCRTPTSAEHKIP 60

Query: 61  KIISCPGAPRKPKRPPVPCKRKLTMELKFFEFVNQEEVDNFFRSAYDLEASSTAPPKRSC 120
           KI+SCPGAP+KPKRPPVPCKRKLTMELKFFE VNQEEVDNFFRSAYDLE+S TAPPKRSC
Sbjct: 61  KILSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDNFFRSAYDLESSPTAPPKRSC 120

Query: 121 CR 123
           CR
Sbjct: 121 CR 120

[Close]
BLAST of Cp4.1LG01g24760 vs. NCBI nr
Match: gi|1009119912|ref|XP_015876638.1| (PREDICTED: cyclin-dependent protein kinase inhibitor SMR1-like isoform X1 [Ziziphus jujuba])

HSP 1 Score: 101.3 bits (251), Expect = 1.3e-18
Identity = 64/131 (48.85%), Postives = 84/131 (64.12%), Query Frame = 1 

Query: 1   MSMDLEFPENLPKIRLP-LQVRSPPKPSNSINIPSSV--------SDHDGADLDHRGC-R 60
           MS DLE  + LPK+ L  ++VR+  K S S +   SV           DG D D   C R
Sbjct: 1   MSTDLELCQELPKVSLQSIRVRTQ-KGSESADTNGSVIPKQDFKGQGDDGQDSDQ--CPR 60

Query: 61  TPTSAEHKIPKIISCPGAPRKPKRPPVPCKRKLTMELKFFEFVNQEEVDNFFRSAYDLEA 120
           TPTS EH+IP++++CP APRKPK   V CKRKLT ELKFFE V ++EVD+FFRS++++  
Sbjct: 61  TPTSKEHRIPELLTCPPAPRKPKTRAVQCKRKLT-ELKFFEIVKRDEVDSFFRSSFEVSG 120

Query: 121 SSTAPPKRSCC 122
            + +  KRSCC
Sbjct: 121 INGSSAKRSCC 127

[Close]
BLAST of Cp4.1LG01g24760 vs. NCBI nr
Match: gi|703138808|ref|XP_010106827.1| (hypothetical protein L484_001720 [Morus notabilis])

HSP 1 Score: 99.4 bits (246), Expect = 4.8e-18
Identity = 66/143 (46.15%), Postives = 87/143 (60.84%), Query Frame = 1 

Query: 1   MSMDLEFPENLPKIRL-PLQVRSPPKPSNSI--------------------NIPSSVSDH 60
           MS DLEF + LPKIRL P+Q+++P +PS S                     NI +    +
Sbjct: 1   MSTDLEFCQALPKIRLSPIQIQTP-EPSESKTEAARSIIQRLDNDRRNSCDNIKNEDIIY 60

Query: 61  DGADLDHRGCRTPTSAEHKIPKIISCPGAPRKPKRPPVP-CKRKLTMELKFFEFVNQEEV 120
           +  +  +  CRTPTSAEH+IP I+SCP APRKP     P CKRKL+ EL FF+ VN+EE+
Sbjct: 61  EEKEEINNECRTPTSAEHRIPAILSCPPAPRKPATARAPSCKRKLS-ELDFFDVVNREEI 120

Query: 121 DNFFRSAYDLEASSTAPPKRSCC 122
           D FFRS++   A+ +A  KRSCC
Sbjct: 121 DRFFRSSFAKAATGSA--KRSCC 139

[Close]
BLAST of Cp4.1LG01g24760 vs. NCBI nr
Match: gi|645252301|ref|XP_008232059.1| (PREDICTED: cyclin-dependent protein kinase inhibitor SMR3 [Prunus mume])

HSP 1 Score: 89.4 bits (220), Expect = 4.9e-15
Identity = 56/121 (46.28%), Postives = 72/121 (59.50%), Query Frame = 1 

Query: 1   MSMDLEFPENLPKIRLPLQVRSPPKPSNSINIPSSVSDHDGADLDHRGCRTPTSAEHKIP 60
           M+  L+F ++LP  R      S PK       P S+ DHD  D    GCRTPTS EHKIP
Sbjct: 1   MATGLDFCQDLPNPRFLTIKISTPKAQQ----PLSLHDHDALDEVAHGCRTPTSKEHKIP 60

Query: 61  KIISCPGAPRKP-KRPPVPCKRKLTMELKFFEFVNQEEVDNFFRSAYDLEASSTAPPKRS 120
            +++CP APRKP +R    CKRK    L+FFE  NQ+EV++FFRS++     S +  KRS
Sbjct: 61  TVVTCPPAPRKPARRAASSCKRK----LQFFETANQDEVEDFFRSSF----LSNSRAKRS 109

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g24760 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SMR1_ARATH3.7e-1038.64Cyclin-dependent protein kinase inhibitor SMR1 OS=Arabidopsis thaliana GN=SMR1 P... [more]
SIM_ARATH5.8e-0832.23Cyclin-dependent protein kinase inhibitor SIM OS=Arabidopsis thaliana GN=SIM PE=... [more]
BLAST of Cp4.1LG01g24760 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LSQ6_CUCSA4.6e-5287.70Uncharacterized protein OS=Cucumis sativus GN=Csa_2G384460 PE=4 SV=1[more]
W9S397_9ROSA3.3e-1846.15Uncharacterized protein OS=Morus notabilis GN=L484_001720 PE=4 SV=1[more]
M5X1M1_PRUPE4.5e-1545.45Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013617mg PE=4 SV=1[more]
U5G4W0_POPTR5.9e-1543.33Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s02960g PE=4 SV=1[more]
A0A067L9G3_JATCU1.3e-1443.90Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01562 PE=4 SV=1[more]
BLAST of Cp4.1LG01g24760 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G10525.12.1e-1138.64 LOSS OF GIANT CELLS FROM ORGANS[more]
AT5G04470.13.3e-0932.23 cyclin-dependent protein kinase inhibitors[more]
AT5G02420.12.6e-0643.75 unknown protein[more]
BLAST of Cp4.1LG01g24760 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659113396|ref|XP_008456553.1|3.9e-5287.70PREDICTED: cyclin-dependent protein kinase inhibitor SMR1-like [Cucumis melo][more]
gi|778672724|ref|XP_011649858.1|6.6e-5287.70PREDICTED: cyclin-dependent protein kinase inhibitor SMR1 [Cucumis sativus][more]
gi|1009119912|ref|XP_015876638.1|1.3e-1848.85PREDICTED: cyclin-dependent protein kinase inhibitor SMR1-like isoform X1 [Zizip... [more]
gi|703138808|ref|XP_010106827.1|4.8e-1846.15hypothetical protein L484_001720 [Morus notabilis][more]
gi|645252301|ref|XP_008232059.1|4.9e-1546.28PREDICTED: cyclin-dependent protein kinase inhibitor SMR3 [Prunus mume][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g24760.1Cp4.1LG01g24760.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33142FAMILY NOT NAMEDcoord: 1..122
score: 4.3
NoneNo IPR availablePANTHERPTHR33142:SF1CYCLIN-DEPENDENT PROTEIN KINASE INHIBITOR SIM-RELATEDcoord: 1..122
score: 4.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g24760Cucsa.163110Cucumber (Gy14) v1cgycpeB0434
Cp4.1LG01g24760CmaCh04G025410Cucurbita maxima (Rimu)cmacpeB721
Cp4.1LG01g24760CmoCh04G026600Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g24760Cla013726Watermelon (97103) v1cpewmB395
Cp4.1LG01g24760Csa2G384460Cucumber (Chinese Long) v2cpecuB388
Cp4.1LG01g24760MELO3C019852Melon (DHL92) v3.5.1cpemeB396
Cp4.1LG01g24760ClCG08G007940Watermelon (Charleston Gray)cpewcgB417
Cp4.1LG01g24760CSPI02G24200Wild cucumber (PI 183967)cpecpiB386
Cp4.1LG01g24760MELO3C019852.2Melon (DHL92) v3.6.1cpemedB461
Cp4.1LG01g24760CsaV3_2G032750Cucumber (Chinese Long) v3cpecucB0483
Cp4.1LG01g24760CsaV3_5G035790Cucumber (Chinese Long) v3cpecucB0527
Cp4.1LG01g24760Bhi07G000675Wax gourdcpewgoB0560
Cp4.1LG01g24760Carg01927Silver-seed gourdcarcpeB1176
Cp4.1LG01g24760Carg04594Silver-seed gourdcarcpeB0965
Cp4.1LG01g24760Carg20724Silver-seed gourdcarcpeB0679
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g24760Wax gourdcpewgoB0527
Cp4.1LG01g24760Cucurbita pepo (Zucchini)cpecpeB038
Cp4.1LG01g24760Cucurbita pepo (Zucchini)cpecpeB199
Cp4.1LG01g24760Cucurbita pepo (Zucchini)cpecpeB207
Cp4.1LG01g24760Cucurbita pepo (Zucchini)cpecpeB379
Cp4.1LG01g24760Cucurbita pepo (Zucchini)cpecpeB384
Cp4.1LG01g24760Cucurbita pepo (Zucchini)cpecpeB407
Cp4.1LG01g24760Cucumber (Gy14) v1cgycpeB0807
Cp4.1LG01g24760Cucurbita maxima (Rimu)cmacpeB309
Cp4.1LG01g24760Cucurbita maxima (Rimu)cmacpeB734
Cp4.1LG01g24760Cucurbita moschata (Rifu)cmocpeB272
Cp4.1LG01g24760Cucurbita moschata (Rifu)cmocpeB401
Cp4.1LG01g24760Cucurbita moschata (Rifu)cmocpeB687
Cp4.1LG01g24760Wild cucumber (PI 183967)cpecpiB425
Cp4.1LG01g24760Cucumber (Chinese Long) v2cpecuB427
Cp4.1LG01g24760Bottle gourd (USVL1VR-Ls)cpelsiB324
Cp4.1LG01g24760Bottle gourd (USVL1VR-Ls)cpelsiB365
Cp4.1LG01g24760Bottle gourd (USVL1VR-Ls)cpelsiB382
Cp4.1LG01g24760Watermelon (Charleston Gray)cpewcgB398
Cp4.1LG01g24760Watermelon (97103) v1cpewmB438
Cp4.1LG01g24760Melon (DHL92) v3.5.1cpemeB385
Cp4.1LG01g24760Cucumber (Gy14) v2cgybcpeB635
Cp4.1LG01g24760Melon (DHL92) v3.6.1cpemedB446
Cp4.1LG01g24760Silver-seed gourdcarcpeB0367
Cp4.1LG01g24760Silver-seed gourdcarcpeB1158