Cp4.1LG01g17860 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g17860
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionFiber protein Fb34
LocationCp4.1LG01 : 14238655 .. 14241491 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CACGGCTTTTTTCACACCCTGCCGCCCACTATGTACAAAGGATTGCCCACACTTTTCTCACTCGCAGTCTTAAGCTCTTGGGAGCCTCTCTCAGTTCTCCCTGGTTGCGATTTGTGAGAGAAATGGAAGGCAAAGGGTCGACTCTGGTTCATCTTCTTGTGGTGGTTTTGTGTTTAGTAGCTTTTGGGTTCTCCATTGCTGCCGAGAGACGAAGAAGTGTGGTATGAGCCAACCCCCCTTTTTTAAATTTTGCATTTACTGTTTGAAGCATTTGTGCTTTTATGAATGTGGGGTTTTCTGAGCTGGAAAGTTTTTGCATCTTTGTGATTTGATGTTGTTCTTGGATTGTTCTTGAATGGAGATTTGTGCTGAAATGTTTATTGATTCTTCTTCTTCTTCTTCTTCTATGTTTACTGCATTTTGATTCTTGTTTTCAATGGAGAGATATGATTCATTATTTGATCTATAAATTAGTTGTTATTTGGATCTATAAATTAGTTCATAAGTATCATCACGTCTGTATAACAGTCAGGACCATTTAGCTTTGCATTTTTGATAATTCTGAAAGATGTGTAAAGTTAAGGCATGAAAATTGGAAACAGCACAAATTTACCACTTGGTTGTACTCCCTGGTGAAGTAAATTGAATATGCATTATGATGAGGGTTATGTATACTTCAACAGGGGACTCTGTTTGAAGACAAGGAAAGGAACGCGACCTACTGTGTGTACGACTCGGATGTGGCAACTGGTTATGGTGTAGGAGGTTTCTTATTTCTTCTCTCTGGTGAATCATTGCTGATGGGTGTCACAAAGTGCATGTGTTTTGGGAGACCTTTAACCCCGGGAGGAAATCGGGCATGGGCTATTATTTACTTTTTATCCTCATGGTGAGAATTTCTTCTTCTTCCTTTTGTTTTTCCAGAAGAATGAACAATAATGTGCTGTTATTTGTGGAACAAATACTCTGTTATGCTCTTACCTCCTATTTTTACCACGATACATGTTATTCTTAGCAAGTTTGCATTCAGTTATCAATATTTTTTTTAGGTTGCTAGGTTTTTGGTCCTGTAACCCTATGAAAACTCTAGCCAATTGGATGTAAGAACCCTTGTCGATATGCAAATCCCAGATCACATATACTAAAGCTTCAAATCAAGATGGTTTAATTCCAAATGATATGGAACTCTTGGAAATTCGATCTACCAACCTTATTGAAAAATAAAACTTTTAGGTTTAAAATATCCAAGAACTTCAGAACGATAAGGAATCAGCTCAAGGAAAAGTAAAATCTAGATTACCTAGTTGATCAAATATCATAAGCTAAGAAAACTTATTTGAGATTTCCAATCACTCCATAAGTAAAATTAATCAAGTCACATGCACCATAAACTACATAGATTGCAAAACAGACATAGCTCTAGGCTAAAAAGATGCACAAATTACTACTTTTTTCTAGCCTCTTTTACAAATACAATCACGAAACTCTTGGCCTTCCACGAGACGTTTCAATAGTTTAACCTTCAAAGTTTATGACCATAATTAACCATCATGTAAATGCATCTCAAAAGTAAATAAAAAGTATTAAAACTGAAAATACACCAATAAAACACTATAGATCCAAAAACAGTAGATTTCAATCATCCACCTAAGAATTTGTAACCATCCTTGAATAAATGAATGTCCTGCTTAAAATAGTTTGAATCCATTGTTGCTTAAGTTAAGTTTGACTTTATTTCAATGTGGCATAAAATGCAACTTAAGTTGAACTTTAAGGAAACTTGACTTCACTTCATGTGAATAGAGTTTATCTTGTGGTTCCTTCTAGTCTTGAGTCATGCTGTGTATAGACACATGAACAAGTACCACAATCCTGTGTGTGTGGCATTGATATTGTTTAAGGTGCTACAAGAAATGTGCTACCCTTTCTTCTTCTCTGCCATTTGAAATTCGAGGAGGAAGATAATTGATGTATTTAAAAGTTTCCATGGCTGTTAAACTCGGATTACGCCTTGATATGTGGGTTTTCTTTTCTACGGATCTGTTTATAGCATAGGTTAAATAAATGTAGCTGACCCAAGTTACGAAGCTCATATTTTATGCTACCTATAAGCTTTTGCTGATCATAGATTTATATGAACTTCTATTTCCAATAGGCCCTTTTTTTGCACCATTTTGTTTAGGCGATGAACCACACCTCAACTACAGGCTTGTTTGTGCTTAAGACTAAAATCTTTTTGAACATCTTACAAATCTTCAGGGCAACATTTATAGTAGCGGAAGCGTGTCTAATTGCGGGTGCAGCGAAAAATGCATACCATACAAAGTATCGAGGAATGATATATGCTCAAAACTTAGCATGTGAAACATTAAGGAAAGGAGTGTTCATTGCTGGGGCAGTGTTTGTGGTTGCAACCATGATTCTTAATGTGTATTACTACATGTACTTCACCAAGGCAACATCTTCTCAAGCATCGCACAAAGCAAAGCGTTCAAGTTCAACGGTTGGGATGACAGGGTATGCCTAAATTCAATTCAATTCAAATGTGATAGGCTGGTTAAAGCTTCCATGATGGCCTTCATTGGTGGGTGGGTGATGTTTATGATTATTACTGATTGTGATATATAGTTTCATAGTCACTTTTTGTGGTTAAGATATGTAAACAAGTGATGTAAGAACAGAAAATGGTTTGCTCAAAATTCTGCAGCAATTTTCAAGTGGTTTGAAGCTAAAAATTTGAAGGTTATATTGATTTATATATGGTGCTTTTGAAGCAGACTTCAGAATGCTGCTCTGTCTGCTCATATTCCATTTCAATTGTTTTCATTGTAGGGACA

mRNA sequence

CACGGCTTTTTTCACACCCTGCCGCCCACTATGTACAAAGGATTGCCCACACTTTTCTCACTCGCAGTCTTAAGCTCTTGGGAGCCTCTCTCAGTTCTCCCTGGTTGCGATTTGTGAGAGAAATGGAAGGCAAAGGGTCGACTCTGGTTCATCTTCTTGTGGTGGTTTTGTGTTTAGTAGCTTTTGGGTTCTCCATTGCTGCCGAGAGACGAAGAAGTGTGGGGACTCTGTTTGAAGACAAGGAAAGGAACGCGACCTACTGTGTGTACGACTCGGATGTGGCAACTGGTTATGGTGTAGGAGGTTTCTTATTTCTTCTCTCTGGTGAATCATTGCTGATGGGTGTCACAAAGTGCATGTGTTTTGGGAGACCTTTAACCCCGGGAGGAAATCGGGCATGGGCTATTATTTACTTTTTATCCTCATGGGCAACATTTATAGTAGCGGAAGCGTGTCTAATTGCGGGTGCAGCGAAAAATGCATACCATACAAAGTATCGAGGAATGATATATGCTCAAAACTTAGCATGTGAAACATTAAGGAAAGGAGTGTTCATTGCTGGGGCAGTGTTTGTGGTTGCAACCATGATTCTTAATGTGTATTACTACATGTACTTCACCAAGGCAACATCTTCTCAAGCATCGCACAAAGCAAAGCGTTCAAGTTCAACGGTTGGGATGACAGGGTATGCCTAAATTCAATTCAATTCAAATGTGATAGGCTGGTTAAAGCTTCCATGATGGCCTTCATTGGTGGGTGGGTGATGTTTATGATTATTACTGATTGTGATATATAGTTTCATAGTCACTTTTTGTGGTTAAGATATGTAAACAAGTGATGTAAGAACAGAAAATGGTTTGCTCAAAATTCTGCAGCAATTTTCAAGTGGTTTGAAGCTAAAAATTTGAAGGTTATATTGATTTATATATGGTGCTTTTGAAGCAGACTTCAGAATGCTGCTCTGTCTGCTCATATTCCATTTCAATTGTTTTCATTGTAGGGACA

Coding sequence (CDS)

ATGGAAGGCAAAGGGTCGACTCTGGTTCATCTTCTTGTGGTGGTTTTGTGTTTAGTAGCTTTTGGGTTCTCCATTGCTGCCGAGAGACGAAGAAGTGTGGGGACTCTGTTTGAAGACAAGGAAAGGAACGCGACCTACTGTGTGTACGACTCGGATGTGGCAACTGGTTATGGTGTAGGAGGTTTCTTATTTCTTCTCTCTGGTGAATCATTGCTGATGGGTGTCACAAAGTGCATGTGTTTTGGGAGACCTTTAACCCCGGGAGGAAATCGGGCATGGGCTATTATTTACTTTTTATCCTCATGGGCAACATTTATAGTAGCGGAAGCGTGTCTAATTGCGGGTGCAGCGAAAAATGCATACCATACAAAGTATCGAGGAATGATATATGCTCAAAACTTAGCATGTGAAACATTAAGGAAAGGAGTGTTCATTGCTGGGGCAGTGTTTGTGGTTGCAACCATGATTCTTAATGTGTATTACTACATGTACTTCACCAAGGCAACATCTTCTCAAGCATCGCACAAAGCAAAGCGTTCAAGTTCAACGGTTGGGATGACAGGGTATGCCTAA

Protein sequence

MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKERNATYCVYDSDVATGYGVGGFLFLLSGESLLMGVTKCMCFGRPLTPGGNRAWAIIYFLSSWATFIVAEACLIAGAAKNAYHTKYRGMIYAQNLACETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSQASHKAKRSSSTVGMTGYA
Homology
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BLAST of Cp4.1LG01g17860 vs. TrEMBL
Match: A0A0A0KQ16_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G373210 PE=4 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 3.0e-95
Identity = 178/190 (93.68%), Postives = 183/190 (96.32%), Query Frame = 1 

Query: 1   MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKERNATYCVYDSDVATGYGVG 60
           MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDK+RNATYCVY+SDVATGYGVG
Sbjct: 1   MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKQRNATYCVYESDVATGYGVG 60

Query: 61  GFLFLLSGESLLMGVTKCMCFGRPLTPGGNRAWAIIYFLSSWATFIVAEACLIAGAAKNA 120
            FLFLLSG+SLLMGVTKCMCFG+PLTPGGNRAW IIYFLSS ATF+VAEACLIAGA KNA
Sbjct: 61  AFLFLLSGQSLLMGVTKCMCFGKPLTPGGNRAWTIIYFLSSGATFLVAEACLIAGATKNA 120

Query: 121 YHTKYRGMIYAQNLACETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSQASHKAKRS 180
           YHTKYRGMIYAQNL CETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSQ SHKA RS
Sbjct: 121 YHTKYRGMIYAQNLPCETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSQTSHKANRS 180

Query: 181 SSTVGMTGYA 191
           SSTVGMTGYA
Sbjct: 181 SSTVGMTGYA 190

[Close]
BLAST of Cp4.1LG01g17860 vs. TrEMBL
Match: D7T946_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g03560 PE=4 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 2.6e-86
Identity = 162/189 (85.71%), Postives = 176/189 (93.12%), Query Frame = 1 

Query: 2   EGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKERNATYCVYDSDVATGYGVGG 61
           EGKGSTLVHL+VVVL LVAFGF++AAERRRSVGT+  D +RNATYCVY+SDVATGYGVGG
Sbjct: 3   EGKGSTLVHLVVVVLSLVAFGFAVAAERRRSVGTIVTD-DRNATYCVYNSDVATGYGVGG 62

Query: 62  FLFLLSGESLLMGVTKCMCFGRPLTPGGNRAWAIIYFLSSWATFIVAEACLIAGAAKNAY 121
           FLFLL+ ESLLMGVTKCMCFGRPL PGGNRAW+IIYF+SSW TF+VAEACLIAGA KNAY
Sbjct: 63  FLFLLTSESLLMGVTKCMCFGRPLAPGGNRAWSIIYFVSSWMTFLVAEACLIAGATKNAY 122

Query: 122 HTKYRGMIYAQNLACETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSQASHKAKRSS 181
           HTKYRGMIYAQN +CETLRKGVFIAGAVFVVATMILNVYYYMYF+KAT +QA  KA R+S
Sbjct: 123 HTKYRGMIYAQNFSCETLRKGVFIAGAVFVVATMILNVYYYMYFSKATDTQAVRKANRAS 182

Query: 182 STVGMTGYA 191
           STVGMTGYA
Sbjct: 183 STVGMTGYA 190

[Close]
BLAST of Cp4.1LG01g17860 vs. TrEMBL
Match: M5XF15_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011926mg PE=4 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 5.7e-86
Identity = 158/189 (83.60%), Postives = 173/189 (91.53%), Query Frame = 1 

Query: 2   EGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKERNATYCVYDSDVATGYGVGG 61
           EGKGSTLVHLLV+VL LVAFGF+IAAER+RSVG + +D   N TYCVY+SDVATGYGVGG
Sbjct: 3   EGKGSTLVHLLVIVLSLVAFGFAIAAERQRSVGRIEKDDRTNETYCVYNSDVATGYGVGG 62

Query: 62  FLFLLSGESLLMGVTKCMCFGRPLTPGGNRAWAIIYFLSSWATFIVAEACLIAGAAKNAY 121
           FLFLLSGESLLMG+TKCMCFGRPL PGGNRAW+IIYF+SSW TF+VAEACLIAGA KNAY
Sbjct: 63  FLFLLSGESLLMGITKCMCFGRPLAPGGNRAWSIIYFVSSWTTFLVAEACLIAGATKNAY 122

Query: 122 HTKYRGMIYAQNLACETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSQASHKAKRSS 181
           HTKYRGMIYAQN +CE LRKGVFI+GAVFVV TMILNVYYYMYFTKAT++QA+HKA  SS
Sbjct: 123 HTKYRGMIYAQNFSCEALRKGVFISGAVFVVVTMILNVYYYMYFTKATTTQAAHKANHSS 182

Query: 182 STVGMTGYA 191
           STVGM GYA
Sbjct: 183 STVGMAGYA 191

[Close]
BLAST of Cp4.1LG01g17860 vs. TrEMBL
Match: V7C938_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G035600g PE=4 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 1.7e-85
Identity = 158/189 (83.60%), Postives = 172/189 (91.01%), Query Frame = 1 

Query: 2   EGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKERNATYCVYDSDVATGYGVGG 61
           EGKGSTLVHLLVVVL LVAFGF+IAAERRRSVGT+++ ++ N TYC Y SDVATGYGVG 
Sbjct: 3   EGKGSTLVHLLVVVLSLVAFGFAIAAERRRSVGTMYKIEKTNETYCSYSSDVATGYGVGA 62

Query: 62  FLFLLSGESLLMGVTKCMCFGRPLTPGGNRAWAIIYFLSSWATFIVAEACLIAGAAKNAY 121
           FLFLLSGESLLMGVTKCMCFGRPLTPGGNRAW+IIYFLSSW TF+VAEACLIAGA KNAY
Sbjct: 63  FLFLLSGESLLMGVTKCMCFGRPLTPGGNRAWSIIYFLSSWITFLVAEACLIAGATKNAY 122

Query: 122 HTKYRGMIYAQNLACETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSQASHKAKRSS 181
           HTKYRGM+YAQN +CE LRKGVF+AGAVF+VATMILNVYYYMYFTKA ++  SHKA R S
Sbjct: 123 HTKYRGMVYAQNFSCEALRKGVFVAGAVFIVATMILNVYYYMYFTKAITTPVSHKANRVS 182

Query: 182 STVGMTGYA 191
           STVGM GYA
Sbjct: 183 STVGMAGYA 191

[Close]
BLAST of Cp4.1LG01g17860 vs. TrEMBL
Match: A0A0S3T2Q2_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.10G076900 PE=4 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 2.2e-85
Identity = 159/189 (84.13%), Postives = 172/189 (91.01%), Query Frame = 1 

Query: 2   EGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKERNATYCVYDSDVATGYGVGG 61
           EG+GSTLVHLLVVVL LVAFGF+IAAERRRSVGT+F+ ++ N TYC Y SDVATGYGVG 
Sbjct: 3   EGRGSTLVHLLVVVLSLVAFGFAIAAERRRSVGTMFKIEKTNETYCSYSSDVATGYGVGA 62

Query: 62  FLFLLSGESLLMGVTKCMCFGRPLTPGGNRAWAIIYFLSSWATFIVAEACLIAGAAKNAY 121
           FLFLLSGESLLMGVTKCMCFGRPLTPGGNRAW+IIYFLSSW TF+VAEACLIAGA KNAY
Sbjct: 63  FLFLLSGESLLMGVTKCMCFGRPLTPGGNRAWSIIYFLSSWITFLVAEACLIAGATKNAY 122

Query: 122 HTKYRGMIYAQNLACETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSQASHKAKRSS 181
           HTKYRGMI AQN +CE LRKGVF+AGAVF+VATMILNVYYYMYFTKAT++  SHKA R S
Sbjct: 123 HTKYRGMILAQNFSCEALRKGVFVAGAVFIVATMILNVYYYMYFTKATTTPVSHKANRVS 182

Query: 182 STVGMTGYA 191
           STVGM GYA
Sbjct: 183 STVGMAGYA 191

[Close]
BLAST of Cp4.1LG01g17860 vs. TAIR10
Match: AT1G13380.1 (AT1G13380.1 Protein of unknown function (DUF1218))

HSP 1 Score: 282.3 bits (721), Expect = 2.1e-76
Identity = 139/189 (73.54%), Postives = 158/189 (83.60%), Query Frame = 1 

Query: 2   EGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKERNATYCVYDSDVATGYGVGG 61
           EGK STLV +LVV L LVAFGFSIAAERRRS+G   +D   N T+CVYDSDVATGYGVG 
Sbjct: 3   EGKASTLVFILVVALSLVAFGFSIAAERRRSIGKSIQDPITNTTFCVYDSDVATGYGVGA 62

Query: 62  FLFLLSGESLLMGVTKCMCFGRPLTPGGNRAWAIIYFLSSWATFIVAEACLIAGAAKNAY 121
           FLFLLS ESLLM VTKCMCFGRPL PG +RAW+IIYF+SSW TF+VAEAC+IAGA KNAY
Sbjct: 63  FLFLLSSESLLMSVTKCMCFGRPLAPGSDRAWSIIYFISSWMTFLVAEACVIAGATKNAY 122

Query: 122 HTKYRGMIYAQNLACETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSQASHKAKRSS 181
           HTKY   + +Q  +C +LRKG+FIAGAVF+VATM+LNVYYYMYFTK+ SS  +HKA RSS
Sbjct: 123 HTKY---LSSQTFSCASLRKGIFIAGAVFIVATMVLNVYYYMYFTKSVSSPPAHKANRSS 182

Query: 182 STVGMTGYA 191
           S +GM GYA
Sbjct: 183 SNIGMAGYA 188

[Close]
BLAST of Cp4.1LG01g17860 vs. TAIR10
Match: AT4G27435.1 (AT4G27435.1 Protein of unknown function (DUF1218))

HSP 1 Score: 173.7 bits (439), Expect = 1.1e-43
Identity = 85/169 (50.30%), Postives = 115/169 (68.05%), Query Frame = 1 

Query: 6   STLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKERNATYCVYDSDVATGYGVGGFLFL 65
           S +V  +V V  L+AFG ++AAE+RRS   + +D E    YCVYDSD ATGYGVG FLF 
Sbjct: 3   SKIVSAIVFVFNLIAFGLAVAAEQRRSTARVVQDTEVQYNYCVYDSDRATGYGVGAFLFS 62

Query: 66  LSGESLLMGVTKCMCFGRPLTPGGNRAWAIIYFLSSWATFIVAEACLIAGAAKNAYHTKY 125
           ++ + L+M V++C C G+PL PGG+RA A+I F+ SW  F++AE CL+AG+ +NAYHTKY
Sbjct: 63  VASQILIMLVSRCFCCGKPLKPGGSRALALILFIVSWMFFLIAEICLLAGSVENAYHTKY 122

Query: 126 RGMIYAQNLACETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSQAS 175
           R M       C+TLRKGVF AGA FV    I++ +YY ++  A  +  S
Sbjct: 123 RTMFMDNPPDCQTLRKGVFAAGASFVFFNAIVSQFYYFFYFSAAEASLS 171

[Close]
BLAST of Cp4.1LG01g17860 vs. TAIR10
Match: AT1G61065.1 (AT1G61065.1 Protein of unknown function (DUF1218))

HSP 1 Score: 164.9 bits (416), Expect = 5.0e-41
Identity = 81/169 (47.93%), Postives = 117/169 (69.23%), Query Frame = 1 

Query: 6   STLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKERNATYCVYDSDVATGYGVGGFLFL 65
           S L+ LLV V  L+AFG ++AAE+RR+   +  +  R+ +YCVYD D+ATG GVG FL L
Sbjct: 3   SVLLLLLVFVFDLIAFGLAVAAEQRRTTWQISRES-RDLSYCVYDKDIATGLGVGSFLVL 62

Query: 66  LSGESLLMGVTKCMCFGRPLTPGGNRAWAIIYFLSSWATFIVAEACLIAGAAKNAYHTKY 125
           L+ + L+M  ++C+C GR LTP G+R+WAI  F+++W  F +A+ CL+AG+ +NAYHTKY
Sbjct: 63  LASQLLIMVASRCLCCGRALTPSGSRSWAIFLFITTWVFFFIAQVCLLAGSVRNAYHTKY 122

Query: 126 RGMIYAQNLACETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSQAS 175
           R      + +C +LRKGVF AGA F+V T I++  YY+  ++A   Q S
Sbjct: 123 RVYFGNTSPSCRSLRKGVFGAGAAFIVLTGIVSELYYVTLSRAKDFQPS 170

[Close]
BLAST of Cp4.1LG01g17860 vs. TAIR10
Match: AT3G15480.1 (AT3G15480.1 Protein of unknown function (DUF1218))

HSP 1 Score: 160.2 bits (404), Expect = 1.2e-39
Identity = 77/164 (46.95%), Postives = 114/164 (69.51%), Query Frame = 1 

Query: 6   STLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKERNATYCVYDSDVATGYGVGGFLFL 65
           S LV ++V +L L+A G +IAAE+RRSVG +  D+++   YCVY +D+AT YG G F+ L
Sbjct: 3   SKLVVIIVFILDLIAVGLAIAAEQRRSVGKVETDRDKQYDYCVYGTDIATSYGAGAFVLL 62

Query: 66  LSGESLLMGVTKCMCFGRPLTPGGNRAWAIIYFLSSWATFIVAEACLIAGAAKNAYHTKY 125
              + L+M  ++C C G+ L PGG+RA AII FL  W  F++AE CL+A + +NAYHT+Y
Sbjct: 63  FVSQVLIMAASRCFCCGKSLNPGGSRACAIILFLICWVFFLIAEMCLLAASIRNAYHTQY 122

Query: 126 RGMIYAQN-LACETLRKGVFIAGAVFVVATMILNVYYYMYFTKA 169
           R M   ++  +CE +RKGVF AGA F + T I++ +YY+ +++A
Sbjct: 123 RKMWKVEDPPSCEVIRKGVFAAGAAFTLFTAIVSQFYYVCYSRA 166

[Close]
BLAST of Cp4.1LG01g17860 vs. TAIR10
Match: AT1G52910.1 (AT1G52910.1 Protein of unknown function (DUF1218))

HSP 1 Score: 155.2 bits (391), Expect = 4.0e-38
Identity = 76/164 (46.34%), Postives = 111/164 (67.68%), Query Frame = 1 

Query: 6   STLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKERNATYCVYDSDVATGYGVGGFLFL 65
           S LV ++V +L L+A G +IAAE+RRSVG +  D E+   +C Y SD+AT YG G F+ L
Sbjct: 3   SKLVIIIVFILDLIAVGLAIAAEQRRSVGKVVPDGEKEFEHCEYGSDIATSYGAGAFVLL 62

Query: 66  LSGESLLMGVTKCMCFGRPLTPGGNRAWAIIYFLSSWATFIVAEACLIAGAAKNAYHTKY 125
              + ++M  ++C C G+ L PGG+RA  I+ FL  W  F++AE CL+AG+ +NAYHT Y
Sbjct: 63  FISQVIIMVASRCFCCGKALKPGGSRACGIMLFLICWVFFLIAEVCLLAGSIRNAYHTTY 122

Query: 126 RGMIYAQN-LACETLRKGVFIAGAVFVVATMILNVYYYMYFTKA 169
           R M   +N  +CE +RKGVF AGA F + T I++ +YY+ +++A
Sbjct: 123 RRMWNIENPPSCEVIRKGVFAAGASFALFTAIVSQFYYISYSRA 166

[Close]
BLAST of Cp4.1LG01g17860 vs. NCBI nr
Match: gi|659131649|ref|XP_008465787.1| (PREDICTED: uncharacterized protein LOC103503388 [Cucumis melo])

HSP 1 Score: 358.6 bits (919), Expect = 6.7e-96
Identity = 180/190 (94.74%), Postives = 184/190 (96.84%), Query Frame = 1 

Query: 1   MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKERNATYCVYDSDVATGYGVG 60
           MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDK+RNATYCVY+SDVATGYGVG
Sbjct: 1   MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKQRNATYCVYESDVATGYGVG 60

Query: 61  GFLFLLSGESLLMGVTKCMCFGRPLTPGGNRAWAIIYFLSSWATFIVAEACLIAGAAKNA 120
            FLFLLSG+SLLMGVTKCMCFGRPLTPGGNRAW IIYFLSS ATF+VAEACLIAGA KNA
Sbjct: 61  AFLFLLSGQSLLMGVTKCMCFGRPLTPGGNRAWTIIYFLSSGATFLVAEACLIAGATKNA 120

Query: 121 YHTKYRGMIYAQNLACETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSQASHKAKRS 180
           YHTKYRGMIYAQNL CETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSQASHKA RS
Sbjct: 121 YHTKYRGMIYAQNLPCETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSQASHKANRS 180

Query: 181 SSTVGMTGYA 191
           SSTVGMTGYA
Sbjct: 181 SSTVGMTGYA 190

[Close]
BLAST of Cp4.1LG01g17860 vs. NCBI nr
Match: gi|449445144|ref|XP_004140333.1| (PREDICTED: uncharacterized protein LOC101221296 [Cucumis sativus])

HSP 1 Score: 355.9 bits (912), Expect = 4.3e-95
Identity = 178/190 (93.68%), Postives = 183/190 (96.32%), Query Frame = 1 

Query: 1   MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKERNATYCVYDSDVATGYGVG 60
           MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDK+RNATYCVY+SDVATGYGVG
Sbjct: 1   MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKQRNATYCVYESDVATGYGVG 60

Query: 61  GFLFLLSGESLLMGVTKCMCFGRPLTPGGNRAWAIIYFLSSWATFIVAEACLIAGAAKNA 120
            FLFLLSG+SLLMGVTKCMCFG+PLTPGGNRAW IIYFLSS ATF+VAEACLIAGA KNA
Sbjct: 61  AFLFLLSGQSLLMGVTKCMCFGKPLTPGGNRAWTIIYFLSSGATFLVAEACLIAGATKNA 120

Query: 121 YHTKYRGMIYAQNLACETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSQASHKAKRS 180
           YHTKYRGMIYAQNL CETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSQ SHKA RS
Sbjct: 121 YHTKYRGMIYAQNLPCETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSQTSHKANRS 180

Query: 181 SSTVGMTGYA 191
           SSTVGMTGYA
Sbjct: 181 SSTVGMTGYA 190

[Close]
BLAST of Cp4.1LG01g17860 vs. NCBI nr
Match: gi|694311229|ref|XP_009356779.1| (PREDICTED: uncharacterized protein LOC103947586 [Pyrus x bretschneideri])

HSP 1 Score: 332.4 bits (851), Expect = 5.1e-88
Identity = 164/189 (86.77%), Postives = 177/189 (93.65%), Query Frame = 1 

Query: 2   EGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKERNATYCVYDSDVATGYGVGG 61
           EGKGSTLVHLLVVVL LVAFGF+IAAER+RSVG +  D + N TYCVY+SDVATGYGVGG
Sbjct: 3   EGKGSTLVHLLVVVLSLVAFGFAIAAERQRSVGEIRTDVQTNQTYCVYNSDVATGYGVGG 62

Query: 62  FLFLLSGESLLMGVTKCMCFGRPLTPGGNRAWAIIYFLSSWATFIVAEACLIAGAAKNAY 121
           FLFLLSGESLLMGVTKCMCFGRPL PGGNRAW+IIYF+SSWATF+VAEACLIAGA KNAY
Sbjct: 63  FLFLLSGESLLMGVTKCMCFGRPLAPGGNRAWSIIYFVSSWATFLVAEACLIAGATKNAY 122

Query: 122 HTKYRGMIYAQNLACETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSQASHKAKRSS 181
           HTKYRGMIYAQN +CE LRKGVFI+GAVFVVATMILNVYYYMYFTKAT++QA+HKA RSS
Sbjct: 123 HTKYRGMIYAQNFSCEALRKGVFISGAVFVVATMILNVYYYMYFTKATAAQATHKANRSS 182

Query: 182 STVGMTGYA 191
           STVGMTGYA
Sbjct: 183 STVGMTGYA 191

[Close]
BLAST of Cp4.1LG01g17860 vs. NCBI nr
Match: gi|658008952|ref|XP_008339673.1| (PREDICTED: uncharacterized protein LOC103402700 [Malus domestica])

HSP 1 Score: 331.3 bits (848), Expect = 1.1e-87
Identity = 163/189 (86.24%), Postives = 176/189 (93.12%), Query Frame = 1 

Query: 2   EGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKERNATYCVYDSDVATGYGVGG 61
           EGKGSTLVHLLVVVL LVAFGF+IAAER+RSVG +  D + N TYCVY+SDVATGYGVGG
Sbjct: 3   EGKGSTLVHLLVVVLSLVAFGFAIAAERQRSVGEIRTDVQXNQTYCVYNSDVATGYGVGG 62

Query: 62  FLFLLSGESLLMGVTKCMCFGRPLTPGGNRAWAIIYFLSSWATFIVAEACLIAGAAKNAY 121
           FLFLLSGESLLMGVTKCMCFGRPL PGGNRAW+IIYF SSWATF+VAEACLIAGA KNAY
Sbjct: 63  FLFLLSGESLLMGVTKCMCFGRPLAPGGNRAWSIIYFXSSWATFLVAEACLIAGATKNAY 122

Query: 122 HTKYRGMIYAQNLACETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSQASHKAKRSS 181
           HTKYRGMIYAQN +CE LRKGVF++GAVFVVATMILNVYYYMYFTKAT++QA+HKA RSS
Sbjct: 123 HTKYRGMIYAQNFSCEALRKGVFVSGAVFVVATMILNVYYYMYFTKATAAQATHKANRSS 182

Query: 182 STVGMTGYA 191
           STVGMTGYA
Sbjct: 183 STVGMTGYA 191

[Close]
BLAST of Cp4.1LG01g17860 vs. NCBI nr
Match: gi|694331172|ref|XP_009356267.1| (PREDICTED: uncharacterized protein LOC103947134 [Pyrus x bretschneideri])

HSP 1 Score: 328.2 bits (840), Expect = 9.7e-87
Identity = 162/189 (85.71%), Postives = 175/189 (92.59%), Query Frame = 1 

Query: 2   EGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKERNATYCVYDSDVATGYGVGG 61
           EGKGSTLVHLLVVVL LVAFGF+IAAER+RSVG +  D + N TYCVY+SDVATGYGVGG
Sbjct: 3   EGKGSTLVHLLVVVLSLVAFGFAIAAERQRSVGEIRTDVQTNETYCVYNSDVATGYGVGG 62

Query: 62  FLFLLSGESLLMGVTKCMCFGRPLTPGGNRAWAIIYFLSSWATFIVAEACLIAGAAKNAY 121
           FLFLLSGESLLMGVTKCMCFGRPL PGGNRAW+IIYF+SSW TF+VAEACLIAGA KNAY
Sbjct: 63  FLFLLSGESLLMGVTKCMCFGRPLAPGGNRAWSIIYFISSWTTFLVAEACLIAGATKNAY 122

Query: 122 HTKYRGMIYAQNLACETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSQASHKAKRSS 181
           HTKYR MIYAQN +CE LRKGVFI+GAVFVVATMILNVYYYMYFTKAT++QA+HKA RSS
Sbjct: 123 HTKYREMIYAQNFSCEALRKGVFISGAVFVVATMILNVYYYMYFTKATAAQAAHKANRSS 182

Query: 182 STVGMTGYA 191
           STVGMTGYA
Sbjct: 183 STVGMTGYA 191

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g17860 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG01g17860 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KQ16_CUCSA3.0e-9593.68Uncharacterized protein OS=Cucumis sativus GN=Csa_5G373210 PE=4 SV=1[more]
D7T946_VITVI2.6e-8685.71Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g03560 PE=4 SV=... [more]
M5XF15_PRUPE5.7e-8683.60Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011926mg PE=4 SV=1[more]
V7C938_PHAVU1.7e-8583.60Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G035600g PE=4 SV=1[more]
A0A0S3T2Q2_PHAAN2.2e-8584.13Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.10G076900 PE=... [more]
BLAST of Cp4.1LG01g17860 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G13380.12.1e-7673.54 Protein of unknown function (DUF1218)[more]
AT4G27435.11.1e-4350.30 Protein of unknown function (DUF1218)[more]
AT1G61065.15.0e-4147.93 Protein of unknown function (DUF1218)[more]
AT3G15480.11.2e-3946.95 Protein of unknown function (DUF1218)[more]
AT1G52910.14.0e-3846.34 Protein of unknown function (DUF1218)[more]
BLAST of Cp4.1LG01g17860 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659131649|ref|XP_008465787.1|6.7e-9694.74PREDICTED: uncharacterized protein LOC103503388 [Cucumis melo][more]
gi|449445144|ref|XP_004140333.1|4.3e-9593.68PREDICTED: uncharacterized protein LOC101221296 [Cucumis sativus][more]
gi|694311229|ref|XP_009356779.1|5.1e-8886.77PREDICTED: uncharacterized protein LOC103947586 [Pyrus x bretschneideri][more]
gi|658008952|ref|XP_008339673.1|1.1e-8786.24PREDICTED: uncharacterized protein LOC103402700 [Malus domestica][more]
gi|694331172|ref|XP_009356267.1|9.7e-8785.71PREDICTED: uncharacterized protein LOC103947134 [Pyrus x bretschneideri][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR009606DUF1218
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g17860.1Cp4.1LG01g17860.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009606Protein of unknown function DUF1218PFAMPF06749DUF1218coord: 62..156
score: 4.2
NoneNo IPR availablePANTHERPTHR31769FAMILY NOT NAMEDcoord: 4..189
score: 1.1E
NoneNo IPR availablePANTHERPTHR31769:SF5EXPRESSED PROTEINcoord: 4..189
score: 1.1E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g17860CmaCh04G020470Cucurbita maxima (Rimu)cmacpeB721
Cp4.1LG01g17860CmoCh15G010320Cucurbita moschata (Rifu)cmocpeB286
Cp4.1LG01g17860CmoCh04G021460Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g17860Csa5G373210Cucumber (Chinese Long) v2cpecuB436
Cp4.1LG01g17860MELO3C003027Melon (DHL92) v3.5.1cpemeB352
Cp4.1LG01g17860ClCG03G009550Watermelon (Charleston Gray)cpewcgB381
Cp4.1LG01g17860CSPI05G14030Wild cucumber (PI 183967)cpecpiB435
Cp4.1LG01g17860Lsi09G010370Bottle gourd (USVL1VR-Ls)cpelsiB313
Cp4.1LG01g17860MELO3C003027.2Melon (DHL92) v3.6.1cpemedB413
Cp4.1LG01g17860CsaV3_5G023140Cucumber (Chinese Long) v3cpecucB0530
Cp4.1LG01g17860CsaV3_5G028800Cucumber (Chinese Long) v3cpecucB0547
Cp4.1LG01g17860Bhi07G001074Wax gourdcpewgoB0574
Cp4.1LG01g17860CsGy5G014060Cucumber (Gy14) v2cgybcpeB639
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g17860Cucurbita pepo (Zucchini)cpecpeB037
Cp4.1LG01g17860Cucumber (Gy14) v1cgycpeB0753
Cp4.1LG01g17860Cucumber (Gy14) v1cgycpeB0757
Cp4.1LG01g17860Cucurbita maxima (Rimu)cmacpeB436
Cp4.1LG01g17860Cucurbita moschata (Rifu)cmocpeB400
Cp4.1LG01g17860Wild cucumber (PI 183967)cpecpiB429
Cp4.1LG01g17860Cucumber (Chinese Long) v2cpecuB434
Cp4.1LG01g17860Watermelon (Charleston Gray)cpewcgB391
Cp4.1LG01g17860Watermelon (Charleston Gray)cpewcgB400
Cp4.1LG01g17860Watermelon (97103) v1cpewmB430
Cp4.1LG01g17860Watermelon (97103) v1cpewmB439
Cp4.1LG01g17860Melon (DHL92) v3.5.1cpemeB375
Cp4.1LG01g17860Melon (DHL92) v3.5.1cpemeB387
Cp4.1LG01g17860Cucumber (Gy14) v2cgybcpeB640
Cp4.1LG01g17860Cucumber (Gy14) v2cgybcpeB665
Cp4.1LG01g17860Melon (DHL92) v3.6.1cpemedB432
Cp4.1LG01g17860Silver-seed gourdcarcpeB1180
Cp4.1LG01g17860Silver-seed gourdcarcpeB1450
Cp4.1LG01g17860Cucumber (Chinese Long) v3cpecucB0535
Cp4.1LG01g17860Cucumber (Chinese Long) v3cpecucB0563
Cp4.1LG01g17860Wax gourdcpewgoB0566