CsaV3_5G023140 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATCTAAAAAAGTTCCGACAAAAGTCCCTCTTTTAATCCAACGGATGTCAAAGAAAAATTTGTAATATAAAAAGAAAAAAGGCAAGAATAAAGTAAATGATATTACCCATTCTACGTCGTCGTTTCATAGAAAACACCCTACCCACAAACCTTACTGTGACCACGTATTAAGCCCCCGCCATTCTCCTTTTACTTTTAGCCAAATAAAATCACCGTACCAACTCCCCATTCTCATCTACGTGACTCACACACTCTCTTCCATTGGTTCTAAATTCAGCGTGTATCTCACGTTACTAATTCCCGCCTTGGATCTAATGAAAAACCGCTCCTCCTTTTCCTACACACCTTTCACTTGCTTTTACACTTTTACCTACTCCTCTTCCACGCCTCCGCCGTACTTTTCTCACTCCAAACATAGTGTACACTTCTTGGGAGCTTCTTTCTTGCTGTGATTTGTGAGAAATGGAAGGCAAAGGCTCCACTCTGGTTCATCTTCTAGTTGTGGTTTTGTGCTTAGTGGCTTTTGGGTTCTCCATTGCCGCCGAGAGACGAAGAAGTGTGGTAATGAGAACTAACCCCTTTCCCCTCTTTTTTCATTTTTACCTTTTCATCTTTCAATTATTGGTGCTTTTCTGAATGTGGGGGTTTTGGAGCTGCAAATGCTGATGCAGGTTTCTGGAATTGGGTTGGGATTGTCTTTAATTGATTCGCTGTTGTTGATCTTGTAATGCTTTGTTTTTCCGTTCCCCCAATCCCTAATCAACACGCACGCTTATGGTTGGCTGTGATATGTTCGAGGGTAGAAAGTAGTTTAGATGGGAATTTGGATGGGTTTTGCTTGTTAAACTTTTAGAGTTAGTTTAAATGGAAGTATTTTGAGGAAGCAGTCAATATGTGGAAAGTGTTACTATTGTGAAAGTCATACCAAACCAAACCGACCTTTAGGCTTTTGAAGAACAGAGTTGGGAGGATGGATATGTTCTGCAGCATCATTGCCCCATGTCTTTTTTTCTCTTCTTGAGTACCAACTAGGCTATTCTCTATTGTTTCCAATCCATCTAATTGTTCAGAGGAGAAAAATAAAAAGACATATTCTGCTTTGTTAATCCAAGTTGGTTAATGGCTGGCTTTGATTGACCAATGGTTATTTTGATTATACAGTTTAGAGGCATTGTCATGACTATATCATAGCTGGGGCATTTCATTTTGCAGTTTTGATAATTCTAAATGACCTGTAAAAGTTAATGCATGAGCATTCAAAACAGCTTGGTAATATCAGCTTTCACAAGAAACTTCACATGTTTCAATGAATCCTCTTAAATCCCCAATAGGGTCAGTTGGATTGCTATATATACAAGTTCAGTAACCCAGGGGACCTATAATTTTTACTTTAATATGTTAACTTTAAGGCCTACTTCTCTTAGATACCTTCATCCTATTCCATCTATCAACTTGAGTTGGATTTCTTTGCTCTTGTTGCAACTTTTATTCTTATAACGTTGTCATACAAGCACGAATTTACCAGCTTCTTGTACTCTTTAGTTTGTGGTGAAGTAGTTCACGTGAATGAGAGTGTCACCGCATATTCAATTTGTACAATATAATAATAAGGAGATGTATGCTTTAAACAGGGGACTCTGTTTGAAGATAAGCAACGGAACGCAACCTACTGTGTTTACGAATCAGATGTTGCAACAGGTTATGGCGTAGGGGCTTTCTTATTTCTTCTCTCTGGTCAATCATTGCTGATGGGGGTTACAAAGTGCATGTGTTTTGGAAAACCTTTAACCCCAGGAGGAAACCGGGCATGGACCATTATATACTTTCTCTCTTCAGGGTGAGAATTTCTTTATGGCTCAAGTCTGAAAAAAAACAAGTAAACAAATTTCTTTTTTTTTTTCCTTCTACTAATAATAGAATAATGATATGCTGCTATTTTATTGGAAGAAATGTTCTGCTATGTTGTTAATACACTTGTTTATTCTAAGATATAGACTATCGTTTGAAACTTTGCATTCAACTGGTAGCATTATTATGTTTTCTGGATTTTCTTTTTATATGTCGCTAAGTGTTGGTCTGCTGTGAGTTCACTTCACTTTTTTATGGAAGCCAATCATTGTTGATGACCGCTTTTTTGGAATTATAAAGTATTTCTTGTAGTCGTGTAGTCTTGCCTCTTGCGTTTTGTTGTGTATTAAAGCATAAACAAGTACTACAATCTTTTATGTGTAGCATTAATGGTAATGGTACTCCAAGAAATGTGGTACTCTCTCTTCCTCTCTGGTATATGAAATTTGAGGAAGATAATTGGTGTTTTTAAACTTTACAAGGGTGTTCCATTCAGGTTAAATTTGTGTAACCTTGAGTTTCAAGACTGAGGTTATGTTTTGATATGAGATTGAATAAATCTAGCTGACCCAGCTTATGAAACTAATAGTTTTTTGCTATCTATAAACCCCTGTGAATCATAGATTTATGTAAACTTGGATTTCTATGGCCTTGTATTATTCTTTGCACAATCTAAACACATTTTCAATCATGTTTCATACAGTTTTGTTTAGTCAATGAGCTAAGAGTCGACTCTAGCTCCAGTACAGGCTTTCTTTGTTTAAGAGTCGACCCTTTCTTAGATCTGCATCATCAGTATTTCGAAATGGCAAAATCTGGAGCAAACAAATGCCAACCTCTAACAGATTTAATCCTCTTTTTAATGTCTATGAATCTTCAGGGCTACCTTTTTGGTAGCGGAAGCGTGTTTAATTGCGGGTGCAACAAAAAATGCATACCATACGAAGTATCGAGGAATGATATACGCTCAGAACTTACCATGCGAGACATTGAGGAAAGGAGTGTTCATTGCTGGGGCAGTGTTTGTGGTTGCTACCATGATTCTTAATGTGTATTATTACATGTACTTCACCAAGGCCACATCTTCTCAAACATCTCACAAAGCAAATCGTTCGAGCTCAACAGTTGGGATGACTGGATACGCCTAAGTTCAATCAAATGTAATGGGATCTGATTAAAGCTTCAGTCTTTCCCATCAATGGTGGGTAGGTGATATGTTGAAGATTATTGAATGTTAGATAAAGTTGTACAATCACTTGTGGTTACGATGTATAAACAAGACATGTAAGAAAGAACAGAAAATGCTTTGCTCAAATTTTTTTTGCAGCCAGGCTAAAGTGTTTTGAAATGTTGGTATTTGTCTCTCGCTGTAGTTGGAAACTGAAAATATGAAGATATATTGATTTATAACTATATTATTAGAAGTTAAATAATTGGTTTAGTAGTTATTAATTCTACCGATAGTTTGTTTATTTA ATGGAAGGCAAAGGCTCCACTCTGGTTCATCTTCTAGTTGTGGTTTTGTGCTTAGTGGCTTTTGGGTTCTCCATTGCCGCCGAGAGACGAAGAAGTGTGGGGACTCTGTTTGAAGATAAGCAACGGAACGCAACCTACTGTGTTTACGAATCAGATGTTGCAACAGGTTATGGCGTAGGGGCTTTCTTATTTCTTCTCTCTGGTCAATCATTGCTGATGGGGGTTACAAAGTGCATGTGTTTTGGAAAACCTTTAACCCCAGGAGGAAACCGGGCATGGACCATTATATACTTTCTCTCTTCAGGGGCTACCTTTTTGGTAGCGGAAGCGTGTTTAATTGCGGGTGCAACAAAAAATGCATACCATACGAAGTATCGAGGAATGATATACGCTCAGAACTTACCATGCGAGACATTGAGGAAAGGAGTGTTCATTGCTGGGGCAGTGTTTGTGGTTGCTACCATGATTCTTAATGTGTATTATTACATGTACTTCACCAAGGCCACATCTTCTCAAACATCTCACAAAGCAAATCGTTCGAGCTCAACAGTTGGGATGACTGGATACGCCTAA ATGGAAGGCAAAGGCTCCACTCTGGTTCATCTTCTAGTTGTGGTTTTGTGCTTAGTGGCTTTTGGGTTCTCCATTGCCGCCGAGAGACGAAGAAGTGTGGGGACTCTGTTTGAAGATAAGCAACGGAACGCAACCTACTGTGTTTACGAATCAGATGTTGCAACAGGTTATGGCGTAGGGGCTTTCTTATTTCTTCTCTCTGGTCAATCATTGCTGATGGGGGTTACAAAGTGCATGTGTTTTGGAAAACCTTTAACCCCAGGAGGAAACCGGGCATGGACCATTATATACTTTCTCTCTTCAGGGGCTACCTTTTTGGTAGCGGAAGCGTGTTTAATTGCGGGTGCAACAAAAAATGCATACCATACGAAGTATCGAGGAATGATATACGCTCAGAACTTACCATGCGAGACATTGAGGAAAGGAGTGTTCATTGCTGGGGCAGTGTTTGTGGTTGCTACCATGATTCTTAATGTGTATTATTACATGTACTTCACCAAGGCCACATCTTCTCAAACATCTCACAAAGCAAATCGTTCGAGCTCAACAGTTGGGATGACTGGATACGCCTAA MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKQRNATYCVYESDVATGYGVGAFLFLLSGQSLLMGVTKCMCFGKPLTPGGNRAWTIIYFLSSGATFLVAEACLIAGATKNAYHTKYRGMIYAQNLPCETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSQTSHKANRSSSTVGMTGYA
BLAST of CsaV3_5G023140 vs. NCBI nr
Match: XP_004140333.1 (PREDICTED: uncharacterized protein LOC101221296 [Cucumis sativus] >KGN50959.1 hypothetical protein Csa_5G373210 [Cucumis sativus]) HSP 1 Score: 378.6 bits (971), Expect = 1.2e-101 Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 0
BLAST of CsaV3_5G023140 vs. NCBI nr
Match: XP_008465787.1 (PREDICTED: uncharacterized protein LOC103503388 [Cucumis melo]) HSP 1 Score: 375.6 bits (963), Expect = 1.0e-100 Identity = 188/190 (98.95%), Postives = 189/190 (99.47%), Query Frame = 0
BLAST of CsaV3_5G023140 vs. NCBI nr
Match: XP_023544604.1 (uncharacterized protein LOC111804138 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 359.8 bits (922), Expect = 5.9e-96 Identity = 181/190 (95.26%), Postives = 185/190 (97.37%), Query Frame = 0
BLAST of CsaV3_5G023140 vs. NCBI nr
Match: XP_022938517.1 (uncharacterized protein LOC111444728 isoform X1 [Cucurbita moschata]) HSP 1 Score: 357.5 bits (916), Expect = 2.9e-95 Identity = 181/190 (95.26%), Postives = 184/190 (96.84%), Query Frame = 0
BLAST of CsaV3_5G023140 vs. NCBI nr
Match: XP_022973554.1 (uncharacterized protein LOC111472088 isoform X1 [Cucurbita maxima]) HSP 1 Score: 357.5 bits (916), Expect = 2.9e-95 Identity = 180/190 (94.74%), Postives = 185/190 (97.37%), Query Frame = 0
BLAST of CsaV3_5G023140 vs. TAIR10
Match: AT1G13380.1 (Protein of unknown function (DUF1218)) HSP 1 Score: 280.8 bits (717), Expect = 6.3e-76 Identity = 139/189 (73.54%), Postives = 159/189 (84.13%), Query Frame = 0
BLAST of CsaV3_5G023140 vs. TAIR10
Match: AT4G27435.1 (Protein of unknown function (DUF1218)) HSP 1 Score: 164.1 bits (414), Expect = 8.6e-41 Identity = 84/169 (49.70%), Postives = 111/169 (65.68%), Query Frame = 0
BLAST of CsaV3_5G023140 vs. TAIR10
Match: AT3G15480.1 (Protein of unknown function (DUF1218)) HSP 1 Score: 160.2 bits (404), Expect = 1.2e-39 Identity = 80/164 (48.78%), Postives = 112/164 (68.29%), Query Frame = 0
BLAST of CsaV3_5G023140 vs. TAIR10
Match: AT1G61065.1 (Protein of unknown function (DUF1218)) HSP 1 Score: 157.1 bits (396), Expect = 1.0e-38 Identity = 78/169 (46.15%), Postives = 115/169 (68.05%), Query Frame = 0
BLAST of CsaV3_5G023140 vs. TAIR10
Match: AT1G52910.1 (Protein of unknown function (DUF1218)) HSP 1 Score: 156.4 bits (394), Expect = 1.8e-38 Identity = 82/172 (47.67%), Postives = 114/172 (66.28%), Query Frame = 0
BLAST of CsaV3_5G023140 vs. TrEMBL
Match: tr|A0A0A0KQ16|A0A0A0KQ16_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G373210 PE=4 SV=1) HSP 1 Score: 378.6 bits (971), Expect = 8.1e-102 Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 0
BLAST of CsaV3_5G023140 vs. TrEMBL
Match: tr|A0A1S3CPP1|A0A1S3CPP1_CUCME (uncharacterized protein LOC103503388 OS=Cucumis melo OX=3656 GN=LOC103503388 PE=4 SV=1) HSP 1 Score: 375.6 bits (963), Expect = 6.8e-101 Identity = 188/190 (98.95%), Postives = 189/190 (99.47%), Query Frame = 0
BLAST of CsaV3_5G023140 vs. TrEMBL
Match: tr|A0A1S3T9T3|A0A1S3T9T3_VIGRR (uncharacterized protein LOC106753249 OS=Vigna radiata var. radiata OX=3916 GN=LOC106753249 PE=4 SV=1) HSP 1 Score: 326.2 bits (835), Expect = 4.8e-86 Identity = 161/189 (85.19%), Postives = 174/189 (92.06%), Query Frame = 0
BLAST of CsaV3_5G023140 vs. TrEMBL
Match: tr|A0A1R3IBX3|A0A1R3IBX3_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_13186 PE=4 SV=1) HSP 1 Score: 323.6 bits (828), Expect = 3.1e-85 Identity = 159/189 (84.13%), Postives = 175/189 (92.59%), Query Frame = 0
BLAST of CsaV3_5G023140 vs. TrEMBL
Match: tr|V7C938|V7C938_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_003G035600g PE=4 SV=1) HSP 1 Score: 323.6 bits (828), Expect = 3.1e-85 Identity = 159/189 (84.13%), Postives = 173/189 (91.53%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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