Csa5G373210 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCCACGCCTCCGCCGTACTTTTCTCACTCCAAACATAGTGTACACTTCTTGGGAGCTTCTTTCTTGCTGTGATTTGTGAGAAATGGAAGGCAAAGGCTCCACTCTGGTTCATCTTCTAGTTGTGGTTTTGTGCTTAGTGGCTTTTGGGTTCTCCATTGCCGCCGAGAGACGAAGAAGTGTGGTAATGAGAACTAACCCCTTTCCCCTCTTTTTTCATTTTTACCTTTTCATCTTTCAATTATTGGTGCTTTTCTGAATGTGGGGGTTTTGGAGCTGCAAATGCTGATGCAGGTTTCTGGAATTGGGTTGGGATTGTCTTTAATTGATTCGCTGTTGTTGATCTTGTAATGCTTTGTTTTTCCGTTCCCCCAATCCCTAATCAACACGCACGCTTATGGTTGGCTGTGATATGTTCGAGGGTAGAAAGTAGTTTAGATGGGAATTTGGATGGGTTTTGCTTGTTAAACTTTTAGAGTTAGTTTAAATGGAAGTATTTTGAGGAAGCAGTCAATATGTGGAAAGTGTTACTATTGTGAAAGTCATACCAAACCAAACCGACCTTTAGGCTTTTGAAGAACAGAGTTGGGAGGATGGATATGTTCTGCAGCATCATTGCCCCATGTCTTTTTTTCTCTTCTTGAGTACCAACTAGGCTATTCTCTATTGTTTCCAATCCATCTAATTGTTCAGAGGAGAAAAATAAAAAGACATATTCTGCTTTGTTAATCCAAGTTGGTTAATGGCTGGCTTTGATTGACCAATGGTTATTTTGATTATACAGTTTAGAGGCATTGTCATGACTATATCATAGCTGGGGCATTTCATTTTGCAGTTTTGATAATTCTAAATGACCTGTAAAAGTTAATGCATGAGCATTCAAAACAGCTTGGTAATATCAGCTTTCACAAGAAACTTCACATGTTTCAATGAATCCTCTTAAATCCCCAATAGGGTCAGTTGGATTGCTATATATACAAGTTCAGTAACCCAGGGGACCTATAATTTTTACTTTAATATGTTAACTTTAAGGCCTACTTCTCTTAGATACCTTCATCCTATTCCATCTATCAACTTGAGTTGGATTTCTTTGCTCTTGTTGCAACTTTTATTCTTATAACGTTGTCATACAAGCACGAATTTACCAGCTTCTTGTACTCTTTAGTTTGTGGTGAAGTAGTTCACGTGAATGAGAGTGTCACCGCATATTCAATTTGTACAATATAATAATAAGGAGATGTATGCTTTAAACAGGGGACTCTGTTTGAAGATAAGCAACGGAACGCAACCTACTGTGTTTACGAATCAGATGTTGCAACAGGTTATGGCGTAGGGGCTTTCTTATTTCTTCTCTCTGGTCAATCATTGCTGATGGGGGTTACAAAGTGCATGTGTTTTGGAAAACCTTTAACCCCAGGAGGAAACCGGGCATGGACCATTATATACTTTCTCTCTTCAGGGTGAGAATTTCTTTATGGCTCAAGTCTGAAAAAAAACAAGTAAACAAATTTCTTTTTTTTTTTCCTTCTACTAATAATAGAATAATGATATGCTGCTATTTTATTGGAAGAAATGTTCTGCTATGTTGTTAATACACTTGTTTATTCTAAGATATAGACTATCGTTTGAAACTTTGCATTCAACTGGTAGCATTATTATGTTTTCTGGATTTTCTTTTTATATGTCGCTAAGTGTTGGTCTGCTGTGAGTTCACTTCACTTTTTTATGGAAGCCAATCATTGTTGATGACCGCTTTTTTGGAATTATAAAGTATTTCTTGTAGTCGTGTAGTCTTGCCTCTTGCGTTTTGTTGTGTATTAAAGCATAAACAAGTACTACAATCTTTTATGTGTAGCATTAATGGTAATGGTACTCCAAGAAATGTGGTACTCTCTCTTCCTCTCTGGTATATGAAATTTGAGGAAGATAATTGGTGTTTTTAAACTTTACAAGGGTGTTCCATTCAGGTTAAATTTGTGTAACCTTGAGTTTCAAGACTGAGGTTATGTTTTGATATGAGATTGAATAAATCTAGCTGACCCAGCTTATGAAACTAATAGTTTTTTGCTATCTATAAACCCCTGTGAATCATAGATTTATGTAAACTTGGATTTCTATGGCCTTGTATTATTCTTTGCACAATCTAAACACATTTTCAATCATGTTTCATACAGTTTTGTTTAGTCAATGAGCTAAGAGTCGACTCTAGCTCCAGTACAGGCTTTCTTTGTTTAAGAGTCGACCCTTTCTTAGATCTGCATCATCAGTATTTCGAAATGGCAAAATCTGGAGCAAACAAATGCCAACCTCTAACAGATTTAATCCTCTTTTTAATGTCTATGAATCTTCAGGGCTACCTTTTTGGTAGCGGAAGCGTGTTTAATTGCGGGTGCAACAAAAAATGCATACCATACGAAGTATCGAGGAATGATATACGCTCAGAACTTACCATGCGAGACATTGAGGAAAGGAGTGTTCATTGCTGGGGCAGTGTTTGTGGTTGCTACCATGATTCTTAATGTGTATTATTACATGTACTTCACCAAGGCCACATCTTCTCAAACATCTCACAAAGCAAATCGTTCGAGCTCAACAGTTGGGATGACTGGATACGCCTAAGTTCAATCAAATGTAATGGGATCTGATTAAAGCTTCAGTCTTTCCCATCAATGGTGGGTAGGTGATATGTTGAAGATTATTGAATGTTAGATAAAGTTGTACAATCACTTGTGGTTACGATGTATAAACAAGACATGTAAGAAAGAACAGAAAATGCTTTGCTCAAATTTTTTTTGCAGCCAGGCTAAAGTGTTTTGAAATGTTGGTATTTGTCTCTCGCTGTAGTTGGAAACTGAAAATATGAAGATATATTGATTTATAACTATATTATTAGAAGTTAAA ATGGAAGGCAAAGGCTCCACTCTGGTTCATCTTCTAGTTGTGGTTTTGTGCTTAGTGGCTTTTGGGTTCTCCATTGCCGCCGAGAGACGAAGAAGTGTGGGGACTCTGTTTGAAGATAAGCAACGGAACGCAACCTACTGTGTTTACGAATCAGATGTTGCAACAGGTTATGGCGTAGGGGCTTTCTTATTTCTTCTCTCTGGTCAATCATTGCTGATGGGGGTTACAAAGTGCATGTGTTTTGGAAAACCTTTAACCCCAGGAGGAAACCGGGCATGGACCATTATATACTTTCTCTCTTCAGGGGCTACCTTTTTGGTAGCGGAAGCGTGTTTAATTGCGGGTGCAACAAAAAATGCATACCATACGAAGTATCGAGGAATGATATACGCTCAGAACTTACCATGCGAGACATTGAGGAAAGGAGTGTTCATTGCTGGGGCAGTGTTTGTGGTTGCTACCATGATTCTTAATGTGTATTATTACATGTACTTCACCAAGGCCACATCTTCTCAAACATCTCACAAAGCAAATCGTTCGAGCTCAACAGTTGGGATGACTGGATACGCCTAA ATGGAAGGCAAAGGCTCCACTCTGGTTCATCTTCTAGTTGTGGTTTTGTGCTTAGTGGCTTTTGGGTTCTCCATTGCCGCCGAGAGACGAAGAAGTGTGGGGACTCTGTTTGAAGATAAGCAACGGAACGCAACCTACTGTGTTTACGAATCAGATGTTGCAACAGGTTATGGCGTAGGGGCTTTCTTATTTCTTCTCTCTGGTCAATCATTGCTGATGGGGGTTACAAAGTGCATGTGTTTTGGAAAACCTTTAACCCCAGGAGGAAACCGGGCATGGACCATTATATACTTTCTCTCTTCAGGGGCTACCTTTTTGGTAGCGGAAGCGTGTTTAATTGCGGGTGCAACAAAAAATGCATACCATACGAAGTATCGAGGAATGATATACGCTCAGAACTTACCATGCGAGACATTGAGGAAAGGAGTGTTCATTGCTGGGGCAGTGTTTGTGGTTGCTACCATGATTCTTAATGTGTATTATTACATGTACTTCACCAAGGCCACATCTTCTCAAACATCTCACAAAGCAAATCGTTCGAGCTCAACAGTTGGGATGACTGGATACGCCTAA MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKQRNATYCVYESDVATGYGVGAFLFLLSGQSLLMGVTKCMCFGKPLTPGGNRAWTIIYFLSSGATFLVAEACLIAGATKNAYHTKYRGMIYAQNLPCETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSQTSHKANRSSSTVGMTGYA*
BLAST of Csa5G373210 vs. TrEMBL
Match: A0A0A0KQ16_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G373210 PE=4 SV=1) HSP 1 Score: 382.5 bits (981), Expect = 3.0e-103 Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 1
BLAST of Csa5G373210 vs. TrEMBL
Match: V7C938_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G035600g PE=4 SV=1) HSP 1 Score: 327.4 bits (838), Expect = 1.2e-86 Identity = 159/189 (84.13%), Postives = 173/189 (91.53%), Query Frame = 1
BLAST of Csa5G373210 vs. TrEMBL
Match: A0A0S3T2Q2_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.10G076900 PE=4 SV=1) HSP 1 Score: 327.0 bits (837), Expect = 1.5e-86 Identity = 160/189 (84.66%), Postives = 173/189 (91.53%), Query Frame = 1
BLAST of Csa5G373210 vs. TrEMBL
Match: A0A0B0MSI4_GOSAR (Sodium/hydrogen exchanger 7 OS=Gossypium arboreum GN=F383_22328 PE=4 SV=1) HSP 1 Score: 325.5 bits (833), Expect = 4.4e-86 Identity = 159/189 (84.13%), Postives = 174/189 (92.06%), Query Frame = 1
BLAST of Csa5G373210 vs. TrEMBL
Match: A0A0D2RPA0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G190500 PE=4 SV=1) HSP 1 Score: 325.5 bits (833), Expect = 4.4e-86 Identity = 159/189 (84.13%), Postives = 174/189 (92.06%), Query Frame = 1
BLAST of Csa5G373210 vs. TAIR10
Match: AT1G13380.1 (AT1G13380.1 Protein of unknown function (DUF1218)) HSP 1 Score: 284.6 bits (727), Expect = 4.4e-77 Identity = 139/189 (73.54%), Postives = 157/189 (83.07%), Query Frame = 1
BLAST of Csa5G373210 vs. TAIR10
Match: AT4G27435.1 (AT4G27435.1 Protein of unknown function (DUF1218)) HSP 1 Score: 174.5 bits (441), Expect = 6.3e-44 Identity = 85/169 (50.30%), Postives = 112/169 (66.27%), Query Frame = 1
BLAST of Csa5G373210 vs. TAIR10
Match: AT3G15480.1 (AT3G15480.1 Protein of unknown function (DUF1218)) HSP 1 Score: 163.7 bits (413), Expect = 1.1e-40 Identity = 80/164 (48.78%), Postives = 110/164 (67.07%), Query Frame = 1
BLAST of Csa5G373210 vs. TAIR10
Match: AT1G61065.1 (AT1G61065.1 Protein of unknown function (DUF1218)) HSP 1 Score: 161.4 bits (407), Expect = 5.6e-40 Identity = 78/169 (46.15%), Postives = 113/169 (66.86%), Query Frame = 1
BLAST of Csa5G373210 vs. TAIR10
Match: AT1G52910.1 (AT1G52910.1 Protein of unknown function (DUF1218)) HSP 1 Score: 160.6 bits (405), Expect = 9.5e-40 Identity = 82/172 (47.67%), Postives = 112/172 (65.12%), Query Frame = 1
BLAST of Csa5G373210 vs. NCBI nr
Match: gi|449445144|ref|XP_004140333.1| (PREDICTED: uncharacterized protein LOC101221296 [Cucumis sativus]) HSP 1 Score: 382.5 bits (981), Expect = 4.4e-103 Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 1
BLAST of Csa5G373210 vs. NCBI nr
Match: gi|659131649|ref|XP_008465787.1| (PREDICTED: uncharacterized protein LOC103503388 [Cucumis melo]) HSP 1 Score: 379.4 bits (973), Expect = 3.7e-102 Identity = 188/190 (98.95%), Postives = 189/190 (99.47%), Query Frame = 1
BLAST of Csa5G373210 vs. NCBI nr
Match: gi|694311229|ref|XP_009356779.1| (PREDICTED: uncharacterized protein LOC103947586 [Pyrus x bretschneideri]) HSP 1 Score: 331.6 bits (849), Expect = 8.8e-88 Identity = 163/189 (86.24%), Postives = 174/189 (92.06%), Query Frame = 1
BLAST of Csa5G373210 vs. NCBI nr
Match: gi|658008952|ref|XP_008339673.1| (PREDICTED: uncharacterized protein LOC103402700 [Malus domestica]) HSP 1 Score: 330.5 bits (846), Expect = 2.0e-87 Identity = 162/189 (85.71%), Postives = 173/189 (91.53%), Query Frame = 1
BLAST of Csa5G373210 vs. NCBI nr
Match: gi|951070041|ref|XP_014490525.1| (PREDICTED: uncharacterized protein LOC106753249 [Vigna radiata var. radiata]) HSP 1 Score: 330.1 bits (845), Expect = 2.6e-87 Identity = 161/189 (85.19%), Postives = 174/189 (92.06%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None |