CmoCh15G010320 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh15G010320
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionFiber protein Fb34
LocationCmo_Chr15 : 6248734 .. 6249928 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCATTCCCACTGTTGAGCTCTTCGGAGCCTCTCTCTCTGTCTCTCCCTGAATTCAATTCTGTGCGGTTCGTGATCTGTGGGAAATGGAAGGCAAAGGGTCGACTCTGGTTCATCTTTTAGTGGTGGTTTTGTGTTTAGTGGCTTTCGGGTTCTCCATTGCTGCCGAGAGAAGAAGAAGCGTGGTACGAAATCAACCCTCCCCACCCCCCTTTTCTTTTACTCTTTGAATTATTGAAAAATGTTGATGCAGCTTCCTGTAATTGGGTTGGGATTGTTTCCATTTCTTGCTTCTTTGTGATCTGATACTTGTTCTTGGACTGTTCTCGATTGGTTGTGAAATGTATACTTTCACAGGGGACTCTGTTTGAAGACAAGCAAAGGAACGCGACGTATTGTGTGTACGAATCAGATGTGGCAACAGGGTACGGTGTTGGGGCTTTCTTGTTTCTTCTCTCCGGTGAATCATTGCTGATGTGTGTCACTAAGTGTATGTGTTTTGGGAGACCTTTAACCCCGGGAGGCAACCGAGCATGGACCATTATATACTTCCTCTCCTCATGGTCATCATTTCTTTATTATGATGCCTTCACCTCAAATGGACCATTATATATTCCAACTTCTAACACCTTTAATCCATTTTTCATATGTTATAGGGCGAGTTTTTTAGTAGCGGAAGCGTGTCTAATTGCGGGTGCAACCAAAAATGCGTACCACACCAAGTATCGAGGAATGATATACGCTCAGAACTTGGGATGTGAAACATTGAGGAAAGGAGTGTTCATTGCTGGGGCTGTGTTTGTGGTTGCAACCATGATTCTTAATGTGTATTATTACATGTACTTCACAAAGGCGACATCGTCTCCAGCCTCTCACAAAGCAAATCGTTCTAGCTCGACGGTCGGGATGACCAGGTATGCCTAAATTCAATTCAAATGAGATATAGTTGATTTCAATGGTGGGTAAGTGATAGGTTGATGGTTATTGAATGTTATATATGAAGTTGCATAATCACTTGTTGTGGTTAAGATACATAAACAAGTCATGTAAGAAAGCACATAAAAAGGTTGGCTCAATTTTTTTTTTTTTTTTTGAAGCAATTGTCAAGTGGTTTGAGATGTTGGGTTGTGTTTGTCTCTAGTAGTTGGAAACTGCAAATTTGAAGGGTATATTGATTTATAATTAAACAGTGCTTTGG

mRNA sequence

TCATTCCCACTGTTGAGCTCTTCGGAGCCTCTCTCTCTGTCTCTCCCTGAATTCAATTCTGTGCGGTTCGTGATCTGTGGGAAATGGAAGGCAAAGGGTCGACTCTGGTTCATCTTTTAGTGGTGGTTTTGTGTTTAGTGGCTTTCGGGTTCTCCATTGCTGCCGAGAGAAGAAGAAGCGTGGGGACTCTGTTTGAAGACAAGCAAAGGAACGCGACGTATTGTGTGTACGAATCAGATGTGGCAACAGGGTACGGTGTTGGGGCTTTCTTGTTTCTTCTCTCCGGTGAATCATTGCTGATGTGTGTCACTAAGTGTATGTGTTTTGGGAGACCTTTAACCCCGGGAGGCAACCGAGCATGGACCATTATATACTTCCTCTCCTCATGGGCGAGTTTTTTAGTAGCGGAAGCGTGTCTAATTGCGGGTGCAACCAAAAATGCGTACCACACCAAGTATCGAGGAATGATATACGCTCAGAACTTGGGATGTGAAACATTGAGGAAAGGAGTGTTCATTGCTGGGGCTGTGTTTGTGGTTGCAACCATGATTCTTAATGTGTATTATTACATGTACTTCACAAAGGCGACATCGTCTCCAGCCTCTCACAAAGCAAATCGTTCTAGCTCGACGGTCGGGATGACCAGGTATGCCTAAATTCAATTCAAATGAGATATAGTTGATTTCAATGGTGGGTAAGTGATAGGTTGATGGTTATTGAATGTTATATATGAAGTTGCATAATCACTTGTTGTGGTTAAGATACATAAACAAGTCATGTAAGAAAGCACATAAAAAGGTTGGCTCAATTTTTTTTTTTTTTTTTGAAGCAATTGTCAAGTGGTTTGAGATGTTGGGTTGTGTTTGTCTCTAGTAGTTGGAAACTGCAAATTTGAAGGGTATATTGATTTATAATTAAACAGTGCTTTGG

Coding sequence (CDS)

ATGGAAGGCAAAGGGTCGACTCTGGTTCATCTTTTAGTGGTGGTTTTGTGTTTAGTGGCTTTCGGGTTCTCCATTGCTGCCGAGAGAAGAAGAAGCGTGGGGACTCTGTTTGAAGACAAGCAAAGGAACGCGACGTATTGTGTGTACGAATCAGATGTGGCAACAGGGTACGGTGTTGGGGCTTTCTTGTTTCTTCTCTCCGGTGAATCATTGCTGATGTGTGTCACTAAGTGTATGTGTTTTGGGAGACCTTTAACCCCGGGAGGCAACCGAGCATGGACCATTATATACTTCCTCTCCTCATGGGCGAGTTTTTTAGTAGCGGAAGCGTGTCTAATTGCGGGTGCAACCAAAAATGCGTACCACACCAAGTATCGAGGAATGATATACGCTCAGAACTTGGGATGTGAAACATTGAGGAAAGGAGTGTTCATTGCTGGGGCTGTGTTTGTGGTTGCAACCATGATTCTTAATGTGTATTATTACATGTACTTCACAAAGGCGACATCGTCTCCAGCCTCTCACAAAGCAAATCGTTCTAGCTCGACGGTCGGGATGACCAGGTATGCCTAA
Homology
[Close]
BLAST of CmoCh15G010320 vs. TrEMBL
Match: A0A0A0KQ16_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G373210 PE=4 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 1.0e-95
Identity = 181/190 (95.26%), Postives = 184/190 (96.84%), Query Frame = 1 

Query: 1   MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKQRNATYCVYESDVATGYGVG 60
           MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKQRNATYCVYESDVATGYGVG
Sbjct: 1   MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKQRNATYCVYESDVATGYGVG 60

Query: 61  AFLFLLSGESLLMCVTKCMCFGRPLTPGGNRAWTIIYFLSSWASFLVAEACLIAGATKNA 120
           AFLFLLSG+SLLM VTKCMCFG+PLTPGGNRAWTIIYFLSS A+FLVAEACLIAGATKNA
Sbjct: 61  AFLFLLSGQSLLMGVTKCMCFGKPLTPGGNRAWTIIYFLSSGATFLVAEACLIAGATKNA 120

Query: 121 YHTKYRGMIYAQNLGCETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSPASHKANRS 180
           YHTKYRGMIYAQNL CETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSS  SHKANRS
Sbjct: 121 YHTKYRGMIYAQNLPCETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSQTSHKANRS 180

Query: 181 SSTVGMTRYA 191
           SSTVGMT YA
Sbjct: 181 SSTVGMTGYA 190

[Close]
BLAST of CmoCh15G010320 vs. TrEMBL
Match: V7C938_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G035600g PE=4 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 2.0e-86
Identity = 160/189 (84.66%), Postives = 173/189 (91.53%), Query Frame = 1 

Query: 2   EGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKQRNATYCVYESDVATGYGVGA 61
           EGKGSTLVHLLVVVL LVAFGF+IAAERRRSVGT+++ ++ N TYC Y SDVATGYGVGA
Sbjct: 3   EGKGSTLVHLLVVVLSLVAFGFAIAAERRRSVGTMYKIEKTNETYCSYSSDVATGYGVGA 62

Query: 62  FLFLLSGESLLMCVTKCMCFGRPLTPGGNRAWTIIYFLSSWASFLVAEACLIAGATKNAY 121
           FLFLLSGESLLM VTKCMCFGRPLTPGGNRAW+IIYFLSSW +FLVAEACLIAGATKNAY
Sbjct: 63  FLFLLSGESLLMGVTKCMCFGRPLTPGGNRAWSIIYFLSSWITFLVAEACLIAGATKNAY 122

Query: 122 HTKYRGMIYAQNLGCETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSPASHKANRSS 181
           HTKYRGM+YAQN  CE LRKGVF+AGAVF+VATMILNVYYYMYFTKA ++P SHKANR S
Sbjct: 123 HTKYRGMVYAQNFSCEALRKGVFVAGAVFIVATMILNVYYYMYFTKAITTPVSHKANRVS 182

Query: 182 STVGMTRYA 191
           STVGM  YA
Sbjct: 183 STVGMAGYA 191

[Close]
BLAST of CmoCh15G010320 vs. TrEMBL
Match: A0A0S3T2Q2_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.10G076900 PE=4 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 2.6e-86
Identity = 161/189 (85.19%), Postives = 173/189 (91.53%), Query Frame = 1 

Query: 2   EGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKQRNATYCVYESDVATGYGVGA 61
           EG+GSTLVHLLVVVL LVAFGF+IAAERRRSVGT+F+ ++ N TYC Y SDVATGYGVGA
Sbjct: 3   EGRGSTLVHLLVVVLSLVAFGFAIAAERRRSVGTMFKIEKTNETYCSYSSDVATGYGVGA 62

Query: 62  FLFLLSGESLLMCVTKCMCFGRPLTPGGNRAWTIIYFLSSWASFLVAEACLIAGATKNAY 121
           FLFLLSGESLLM VTKCMCFGRPLTPGGNRAW+IIYFLSSW +FLVAEACLIAGATKNAY
Sbjct: 63  FLFLLSGESLLMGVTKCMCFGRPLTPGGNRAWSIIYFLSSWITFLVAEACLIAGATKNAY 122

Query: 122 HTKYRGMIYAQNLGCETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSPASHKANRSS 181
           HTKYRGMI AQN  CE LRKGVF+AGAVF+VATMILNVYYYMYFTKAT++P SHKANR S
Sbjct: 123 HTKYRGMILAQNFSCEALRKGVFVAGAVFIVATMILNVYYYMYFTKATTTPVSHKANRVS 182

Query: 182 STVGMTRYA 191
           STVGM  YA
Sbjct: 183 STVGMAGYA 191

[Close]
BLAST of CmoCh15G010320 vs. TrEMBL
Match: I1J6K1_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_01G080900 PE=4 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 1.7e-85
Identity = 158/189 (83.60%), Postives = 172/189 (91.01%), Query Frame = 1 

Query: 2   EGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKQRNATYCVYESDVATGYGVGA 61
           +G+GSTLVHLLVVVLCLVAFGF++AAERRRSVGT+ + +  N T+C Y SDVATGYGVGA
Sbjct: 3   DGRGSTLVHLLVVVLCLVAFGFAVAAERRRSVGTMQKIEGTNETFCSYSSDVATGYGVGA 62

Query: 62  FLFLLSGESLLMCVTKCMCFGRPLTPGGNRAWTIIYFLSSWASFLVAEACLIAGATKNAY 121
           FLFLLSGESLLM VTKCMCFGRPLTPGGNRAW+IIYFLSSW +FLVAE+CLIAGATKNAY
Sbjct: 63  FLFLLSGESLLMGVTKCMCFGRPLTPGGNRAWSIIYFLSSWVTFLVAESCLIAGATKNAY 122

Query: 122 HTKYRGMIYAQNLGCETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSPASHKANRSS 181
           HTKYRGMIYAQN  CE LRKGVF+AGAVFVV TMILNVYYYMYFTKAT++P SHKANR S
Sbjct: 123 HTKYRGMIYAQNFSCEALRKGVFVAGAVFVVVTMILNVYYYMYFTKATTTPVSHKANRVS 182

Query: 182 STVGMTRYA 191
           STVGM  YA
Sbjct: 183 STVGMAGYA 191

[Close]
BLAST of CmoCh15G010320 vs. TrEMBL
Match: A0A0B2RRN6_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_047353 PE=4 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 1.7e-85
Identity = 158/189 (83.60%), Postives = 172/189 (91.01%), Query Frame = 1 

Query: 2   EGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKQRNATYCVYESDVATGYGVGA 61
           +G+GSTLVHLLVVVLCLVAFGF++AAERRRSVGT+ + +  N T+C Y SDVATGYGVGA
Sbjct: 3   DGRGSTLVHLLVVVLCLVAFGFAVAAERRRSVGTMQKIEGTNETFCSYSSDVATGYGVGA 62

Query: 62  FLFLLSGESLLMCVTKCMCFGRPLTPGGNRAWTIIYFLSSWASFLVAEACLIAGATKNAY 121
           FLFLLSGESLLM VTKCMCFGRPLTPGGNRAW+IIYFLSSW +FLVAE+CLIAGATKNAY
Sbjct: 63  FLFLLSGESLLMGVTKCMCFGRPLTPGGNRAWSIIYFLSSWVTFLVAESCLIAGATKNAY 122

Query: 122 HTKYRGMIYAQNLGCETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSPASHKANRSS 181
           HTKYRGMIYAQN  CE LRKGVF+AGAVFVV TMILNVYYYMYFTKAT++P SHKANR S
Sbjct: 123 HTKYRGMIYAQNFSCEALRKGVFVAGAVFVVVTMILNVYYYMYFTKATTTPVSHKANRVS 182

Query: 182 STVGMTRYA 191
           STVGM  YA
Sbjct: 183 STVGMAGYA 191

[Close]
BLAST of CmoCh15G010320 vs. TAIR10
Match: AT1G13380.1 (AT1G13380.1 Protein of unknown function (DUF1218))

HSP 1 Score: 287.0 bits (733), Expect = 8.7e-78
Identity = 141/189 (74.60%), Postives = 160/189 (84.66%), Query Frame = 1 

Query: 2   EGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKQRNATYCVYESDVATGYGVGA 61
           EGK STLV +LVV L LVAFGFSIAAERRRS+G   +D   N T+CVY+SDVATGYGVGA
Sbjct: 3   EGKASTLVFILVVALSLVAFGFSIAAERRRSIGKSIQDPITNTTFCVYDSDVATGYGVGA 62

Query: 62  FLFLLSGESLLMCVTKCMCFGRPLTPGGNRAWTIIYFLSSWASFLVAEACLIAGATKNAY 121
           FLFLLS ESLLM VTKCMCFGRPL PG +RAW+IIYF+SSW +FLVAEAC+IAGATKNAY
Sbjct: 63  FLFLLSSESLLMSVTKCMCFGRPLAPGSDRAWSIIYFISSWMTFLVAEACVIAGATKNAY 122

Query: 122 HTKYRGMIYAQNLGCETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSPASHKANRSS 181
           HTKY   + +Q   C +LRKG+FIAGAVF+VATM+LNVYYYMYFTK+ SSP +HKANRSS
Sbjct: 123 HTKY---LSSQTFSCASLRKGIFIAGAVFIVATMVLNVYYYMYFTKSVSSPPAHKANRSS 182

Query: 182 STVGMTRYA 191
           S +GM  YA
Sbjct: 183 SNIGMAGYA 188

[Close]
BLAST of CmoCh15G010320 vs. TAIR10
Match: AT4G27435.1 (AT4G27435.1 Protein of unknown function (DUF1218))

HSP 1 Score: 174.5 bits (441), Expect = 6.3e-44
Identity = 84/169 (49.70%), Postives = 115/169 (68.05%), Query Frame = 1 

Query: 6   STLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKQRNATYCVYESDVATGYGVGAFLFL 65
           S +V  +V V  L+AFG ++AAE+RRS   + +D +    YCVY+SD ATGYGVGAFLF 
Sbjct: 3   SKIVSAIVFVFNLIAFGLAVAAEQRRSTARVVQDTEVQYNYCVYDSDRATGYGVGAFLFS 62

Query: 66  LSGESLLMCVTKCMCFGRPLTPGGNRAWTIIYFLSSWASFLVAEACLIAGATKNAYHTKY 125
           ++ + L+M V++C C G+PL PGG+RA  +I F+ SW  FL+AE CL+AG+ +NAYHTKY
Sbjct: 63  VASQILIMLVSRCFCCGKPLKPGGSRALALILFIVSWMFFLIAEICLLAGSVENAYHTKY 122

Query: 126 RGMIYAQNLGCETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSPAS 175
           R M       C+TLRKGVF AGA FV    I++ +YY ++  A  +  S
Sbjct: 123 RTMFMDNPPDCQTLRKGVFAAGASFVFFNAIVSQFYYFFYFSAAEASLS 171

[Close]
BLAST of CmoCh15G010320 vs. TAIR10
Match: AT1G61065.1 (AT1G61065.1 Protein of unknown function (DUF1218))

HSP 1 Score: 161.4 bits (407), Expect = 5.5e-40
Identity = 81/178 (45.51%), Postives = 119/178 (66.85%), Query Frame = 1 

Query: 6   STLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKQRNATYCVYESDVATGYGVGAFLFL 65
           S L+ LLV V  L+AFG ++AAE+RR+   +  +  R+ +YCVY+ D+ATG GVG+FL L
Sbjct: 3   SVLLLLLVFVFDLIAFGLAVAAEQRRTTWQISRES-RDLSYCVYDKDIATGLGVGSFLVL 62

Query: 66  LSGESLLMCVTKCMCFGRPLTPGGNRAWTIIYFLSSWASFLVAEACLIAGATKNAYHTKY 125
           L+ + L+M  ++C+C GR LTP G+R+W I  F+++W  F +A+ CL+AG+ +NAYHTKY
Sbjct: 63  LASQLLIMVASRCLCCGRALTPSGSRSWAIFLFITTWVFFFIAQVCLLAGSVRNAYHTKY 122

Query: 126 RGMIYAQNLGCETLRKGVFIAGAVFVVATMILNVYYYMYFTKATS-SPASHKANRSSS 183
           R      +  C +LRKGVF AGA F+V T I++  YY+  ++A    P+     R SS
Sbjct: 123 RVYFGNTSPSCRSLRKGVFGAGAAFIVLTGIVSELYYVTLSRAKDFQPSRDPGIRMSS 179

[Close]
BLAST of CmoCh15G010320 vs. TAIR10
Match: AT3G15480.1 (AT3G15480.1 Protein of unknown function (DUF1218))

HSP 1 Score: 160.6 bits (405), Expect = 9.4e-40
Identity = 78/164 (47.56%), Postives = 112/164 (68.29%), Query Frame = 1 

Query: 6   STLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKQRNATYCVYESDVATGYGVGAFLFL 65
           S LV ++V +L L+A G +IAAE+RRSVG +  D+ +   YCVY +D+AT YG GAF+ L
Sbjct: 3   SKLVVIIVFILDLIAVGLAIAAEQRRSVGKVETDRDKQYDYCVYGTDIATSYGAGAFVLL 62

Query: 66  LSGESLLMCVTKCMCFGRPLTPGGNRAWTIIYFLSSWASFLVAEACLIAGATKNAYHTKY 125
              + L+M  ++C C G+ L PGG+RA  II FL  W  FL+AE CL+A + +NAYHT+Y
Sbjct: 63  FVSQVLIMAASRCFCCGKSLNPGGSRACAIILFLICWVFFLIAEMCLLAASIRNAYHTQY 122

Query: 126 RGMIYAQN-LGCETLRKGVFIAGAVFVVATMILNVYYYMYFTKA 169
           R M   ++   CE +RKGVF AGA F + T I++ +YY+ +++A
Sbjct: 123 RKMWKVEDPPSCEVIRKGVFAAGAAFTLFTAIVSQFYYVCYSRA 166

[Close]
BLAST of CmoCh15G010320 vs. TAIR10
Match: AT1G52910.1 (AT1G52910.1 Protein of unknown function (DUF1218))

HSP 1 Score: 156.8 bits (395), Expect = 1.4e-38
Identity = 77/164 (46.95%), Postives = 111/164 (67.68%), Query Frame = 1 

Query: 6   STLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKQRNATYCVYESDVATGYGVGAFLFL 65
           S LV ++V +L L+A G +IAAE+RRSVG +  D ++   +C Y SD+AT YG GAF+ L
Sbjct: 3   SKLVIIIVFILDLIAVGLAIAAEQRRSVGKVVPDGEKEFEHCEYGSDIATSYGAGAFVLL 62

Query: 66  LSGESLLMCVTKCMCFGRPLTPGGNRAWTIIYFLSSWASFLVAEACLIAGATKNAYHTKY 125
              + ++M  ++C C G+ L PGG+RA  I+ FL  W  FL+AE CL+AG+ +NAYHT Y
Sbjct: 63  FISQVIIMVASRCFCCGKALKPGGSRACGIMLFLICWVFFLIAEVCLLAGSIRNAYHTTY 122

Query: 126 RGMIYAQN-LGCETLRKGVFIAGAVFVVATMILNVYYYMYFTKA 169
           R M   +N   CE +RKGVF AGA F + T I++ +YY+ +++A
Sbjct: 123 RRMWNIENPPSCEVIRKGVFAAGASFALFTAIVSQFYYISYSRA 166

[Close]
BLAST of CmoCh15G010320 vs. NCBI nr
Match: gi|659131649|ref|XP_008465787.1| (PREDICTED: uncharacterized protein LOC103503388 [Cucumis melo])

HSP 1 Score: 360.1 bits (923), Expect = 2.3e-96
Identity = 183/190 (96.32%), Postives = 185/190 (97.37%), Query Frame = 1 

Query: 1   MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKQRNATYCVYESDVATGYGVG 60
           MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKQRNATYCVYESDVATGYGVG
Sbjct: 1   MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKQRNATYCVYESDVATGYGVG 60

Query: 61  AFLFLLSGESLLMCVTKCMCFGRPLTPGGNRAWTIIYFLSSWASFLVAEACLIAGATKNA 120
           AFLFLLSG+SLLM VTKCMCFGRPLTPGGNRAWTIIYFLSS A+FLVAEACLIAGATKNA
Sbjct: 61  AFLFLLSGQSLLMGVTKCMCFGRPLTPGGNRAWTIIYFLSSGATFLVAEACLIAGATKNA 120

Query: 121 YHTKYRGMIYAQNLGCETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSPASHKANRS 180
           YHTKYRGMIYAQNL CETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSS ASHKANRS
Sbjct: 121 YHTKYRGMIYAQNLPCETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSQASHKANRS 180

Query: 181 SSTVGMTRYA 191
           SSTVGMT YA
Sbjct: 181 SSTVGMTGYA 190

[Close]
BLAST of CmoCh15G010320 vs. NCBI nr
Match: gi|449445144|ref|XP_004140333.1| (PREDICTED: uncharacterized protein LOC101221296 [Cucumis sativus])

HSP 1 Score: 357.5 bits (916), Expect = 1.5e-95
Identity = 181/190 (95.26%), Postives = 184/190 (96.84%), Query Frame = 1 

Query: 1   MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKQRNATYCVYESDVATGYGVG 60
           MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKQRNATYCVYESDVATGYGVG
Sbjct: 1   MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKQRNATYCVYESDVATGYGVG 60

Query: 61  AFLFLLSGESLLMCVTKCMCFGRPLTPGGNRAWTIIYFLSSWASFLVAEACLIAGATKNA 120
           AFLFLLSG+SLLM VTKCMCFG+PLTPGGNRAWTIIYFLSS A+FLVAEACLIAGATKNA
Sbjct: 61  AFLFLLSGQSLLMGVTKCMCFGKPLTPGGNRAWTIIYFLSSGATFLVAEACLIAGATKNA 120

Query: 121 YHTKYRGMIYAQNLGCETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSPASHKANRS 180
           YHTKYRGMIYAQNL CETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSS  SHKANRS
Sbjct: 121 YHTKYRGMIYAQNLPCETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSQTSHKANRS 180

Query: 181 SSTVGMTRYA 191
           SSTVGMT YA
Sbjct: 181 SSTVGMTGYA 190

[Close]
BLAST of CmoCh15G010320 vs. NCBI nr
Match: gi|951070041|ref|XP_014490525.1| (PREDICTED: uncharacterized protein LOC106753249 [Vigna radiata var. radiata])

HSP 1 Score: 329.3 bits (843), Expect = 4.3e-87
Identity = 162/189 (85.71%), Postives = 174/189 (92.06%), Query Frame = 1 

Query: 2   EGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKQRNATYCVYESDVATGYGVGA 61
           EG+GSTLVHLLVVVL LVAFGF+IAAERRRSVGT+F+ ++ N TYC Y SDVATGYGVGA
Sbjct: 3   EGRGSTLVHLLVVVLSLVAFGFAIAAERRRSVGTMFKIEKTNETYCSYSSDVATGYGVGA 62

Query: 62  FLFLLSGESLLMCVTKCMCFGRPLTPGGNRAWTIIYFLSSWASFLVAEACLIAGATKNAY 121
           FLFLLSGESLLM VTKCMCFGRPLTPGGNRAW+IIYFLSSW +FLVAEACLIAGATKNAY
Sbjct: 63  FLFLLSGESLLMGVTKCMCFGRPLTPGGNRAWSIIYFLSSWITFLVAEACLIAGATKNAY 122

Query: 122 HTKYRGMIYAQNLGCETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSPASHKANRSS 181
           HTKYRGMIYAQN  CE LRKGVF+AGAVF+VATMILNVYYYMYFTKAT++P SHKANR S
Sbjct: 123 HTKYRGMIYAQNFSCEALRKGVFVAGAVFIVATMILNVYYYMYFTKATTTPVSHKANRVS 182

Query: 182 STVGMTRYA 191
           STVGM  YA
Sbjct: 183 STVGMAGYA 191

[Close]
BLAST of CmoCh15G010320 vs. NCBI nr
Match: gi|694311229|ref|XP_009356779.1| (PREDICTED: uncharacterized protein LOC103947586 [Pyrus x bretschneideri])

HSP 1 Score: 327.0 bits (837), Expect = 2.2e-86
Identity = 163/189 (86.24%), Postives = 173/189 (91.53%), Query Frame = 1 

Query: 2   EGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKQRNATYCVYESDVATGYGVGA 61
           EGKGSTLVHLLVVVL LVAFGF+IAAER+RSVG +  D Q N TYCVY SDVATGYGVG 
Sbjct: 3   EGKGSTLVHLLVVVLSLVAFGFAIAAERQRSVGEIRTDVQTNQTYCVYNSDVATGYGVGG 62

Query: 62  FLFLLSGESLLMCVTKCMCFGRPLTPGGNRAWTIIYFLSSWASFLVAEACLIAGATKNAY 121
           FLFLLSGESLLM VTKCMCFGRPL PGGNRAW+IIYF+SSWA+FLVAEACLIAGATKNAY
Sbjct: 63  FLFLLSGESLLMGVTKCMCFGRPLAPGGNRAWSIIYFVSSWATFLVAEACLIAGATKNAY 122

Query: 122 HTKYRGMIYAQNLGCETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSPASHKANRSS 181
           HTKYRGMIYAQN  CE LRKGVFI+GAVFVVATMILNVYYYMYFTKAT++ A+HKANRSS
Sbjct: 123 HTKYRGMIYAQNFSCEALRKGVFISGAVFVVATMILNVYYYMYFTKATAAQATHKANRSS 182

Query: 182 STVGMTRYA 191
           STVGMT YA
Sbjct: 183 STVGMTGYA 191

[Close]
BLAST of CmoCh15G010320 vs. NCBI nr
Match: gi|593780803|ref|XP_007153442.1| (hypothetical protein PHAVU_003G035600g [Phaseolus vulgaris])

HSP 1 Score: 326.6 bits (836), Expect = 2.8e-86
Identity = 160/189 (84.66%), Postives = 173/189 (91.53%), Query Frame = 1 

Query: 2   EGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKQRNATYCVYESDVATGYGVGA 61
           EGKGSTLVHLLVVVL LVAFGF+IAAERRRSVGT+++ ++ N TYC Y SDVATGYGVGA
Sbjct: 3   EGKGSTLVHLLVVVLSLVAFGFAIAAERRRSVGTMYKIEKTNETYCSYSSDVATGYGVGA 62

Query: 62  FLFLLSGESLLMCVTKCMCFGRPLTPGGNRAWTIIYFLSSWASFLVAEACLIAGATKNAY 121
           FLFLLSGESLLM VTKCMCFGRPLTPGGNRAW+IIYFLSSW +FLVAEACLIAGATKNAY
Sbjct: 63  FLFLLSGESLLMGVTKCMCFGRPLTPGGNRAWSIIYFLSSWITFLVAEACLIAGATKNAY 122

Query: 122 HTKYRGMIYAQNLGCETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSPASHKANRSS 181
           HTKYRGM+YAQN  CE LRKGVF+AGAVF+VATMILNVYYYMYFTKA ++P SHKANR S
Sbjct: 123 HTKYRGMVYAQNFSCEALRKGVFVAGAVFIVATMILNVYYYMYFTKAITTPVSHKANRVS 182

Query: 182 STVGMTRYA 191
           STVGM  YA
Sbjct: 183 STVGMAGYA 191

The following BLAST results are available for this feature:
BLAST of CmoCh15G010320 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmoCh15G010320 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KQ16_CUCSA1.0e-9595.26Uncharacterized protein OS=Cucumis sativus GN=Csa_5G373210 PE=4 SV=1[more]
V7C938_PHAVU2.0e-8684.66Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G035600g PE=4 SV=1[more]
A0A0S3T2Q2_PHAAN2.6e-8685.19Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.10G076900 PE=... [more]
I1J6K1_SOYBN1.7e-8583.60Uncharacterized protein OS=Glycine max GN=GLYMA_01G080900 PE=4 SV=1[more]
A0A0B2RRN6_GLYSO1.7e-8583.60Uncharacterized protein OS=Glycine soja GN=glysoja_047353 PE=4 SV=1[more]
BLAST of CmoCh15G010320 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G13380.18.7e-7874.60 Protein of unknown function (DUF1218)[more]
AT4G27435.16.3e-4449.70 Protein of unknown function (DUF1218)[more]
AT1G61065.15.5e-4045.51 Protein of unknown function (DUF1218)[more]
AT3G15480.19.4e-4047.56 Protein of unknown function (DUF1218)[more]
AT1G52910.11.4e-3846.95 Protein of unknown function (DUF1218)[more]
BLAST of CmoCh15G010320 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659131649|ref|XP_008465787.1|2.3e-9696.32PREDICTED: uncharacterized protein LOC103503388 [Cucumis melo][more]
gi|449445144|ref|XP_004140333.1|1.5e-9595.26PREDICTED: uncharacterized protein LOC101221296 [Cucumis sativus][more]
gi|951070041|ref|XP_014490525.1|4.3e-8785.71PREDICTED: uncharacterized protein LOC106753249 [Vigna radiata var. radiata][more]
gi|694311229|ref|XP_009356779.1|2.2e-8686.24PREDICTED: uncharacterized protein LOC103947586 [Pyrus x bretschneideri][more]
gi|593780803|ref|XP_007153442.1|2.8e-8684.66hypothetical protein PHAVU_003G035600g [Phaseolus vulgaris][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR009606DUF1218
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh15G010320.1CmoCh15G010320.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009606Protein of unknown function DUF1218PFAMPF06749DUF1218coord: 61..156
score: 8.6
NoneNo IPR availablePANTHERPTHR31769FAMILY NOT NAMEDcoord: 4..189
score: 1.8E
NoneNo IPR availablePANTHERPTHR31769:SF5EXPRESSED PROTEINcoord: 4..189
score: 1.8E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh15G010320CmaCh04G020470Cucurbita maxima (Rimu)cmacmoB698
CmoCh15G010320CmaCh15G009870Cucurbita maxima (Rimu)cmacmoB287
CmoCh15G010320MELO3C003027Melon (DHL92) v3.5.1cmomeB251
CmoCh15G010320ClCG03G009550Watermelon (Charleston Gray)cmowcgB249
CmoCh15G010320Lsi09G010370Bottle gourd (USVL1VR-Ls)cmolsiB257
CmoCh15G010320Cp4.1LG01g17860Cucurbita pepo (Zucchini)cmocpeB286
CmoCh15G010320MELO3C003027.2Melon (DHL92) v3.6.1cmomedB284
CmoCh15G010320Cla97C03G060660Watermelon (97103) v2cmowmbB282
CmoCh15G010320Carg27854Silver-seed gourdcarcmoB0895
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh15G010320CmoCh04G021460Cucurbita moschata (Rifu)cmocmoB270
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh15G010320Cucurbita pepo (Zucchini)cmocpeB268