CmoCh04G021460 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G021460
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Fiber protein Fb34
Location	Cmo_Chr04 : 14969743 .. 14972317 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACAAAGTATTGCCCACACTTTTCTCACTCGCAGTCTTAAGCTCTTGGGAGCCTCTCTCAGTTCTCCCTGGTTGCGATTTGTGAGAGAAATGGAAGGCAAAGGGTCGACTCTGGTTCATCTTCTTGTGGTGGTTTTGTGTTTAGTAGCTTTTGGGTTCTCCATTGCTGCCGAGAGACGAAGAAGTGTGGTATGAGCCAACCCCCTTTTTGAAATTTTGCTTCTACTGTTTGAATTATTTGTGCTTTTATGAATGTGGGGTTTTCTGAGCTGGAAAGTTTTTGCATCTTTGTGATTTGATGTTGTTCTTGAATGGAGATTTGTGCTGAAATGTTTATTGATTCTTCTTCTTCTTCTTCTTCTTCTATGTTTACTGCATTTTGATTCTTGTTTTCAATGGAGAGATATGATTCATTATTGATCTATAAATTAGTTGTTATTTGGATCTTTAAATTAGTTCATAAGTATCATCACGTCTGTATAACAGTCAGGACCATTTAGCTTTGCATTTTTGATAATTCTGAAAGATGTGTAAAGTTAAGGCATGAAAATTGGAAACAGCACAAATTTACCACTTGGTTGTACTCCCTGGTGAAGTAAATTGAATATGCATTATGATGAGGGTTATGTATACTTCAACAGGGGACTCTGTTTGAAGACAAGGAAAGGAACGCGACCTACTGTGTGTACGACTCGGATGTGGCAACTGGTTATGGTGTAGGAGGTTTCTTATTTCTTCTCTCTGGTGAATCATTGCTGATGGGTGTCACAAAGTGCATGTGTTTTGGGAGACCTTTAACCCCGGGAGGAAATCGGGCATGGGCTATTATTTACTTTTTATCCTCATGGTGAGAATTTCTTCTTCTTCCTTTTGTTTTTCCTAAAGAACCACAATAATGTGCTGCTATTTGTGGAACAAATACTCTGTTATGCTCTTAGCTCCTATTTTTACCACGATACATGTTATTCTTAGGAAGTTTGCATTCAGTTATCAATATTTTATTTTACATGTTGCTAGGTTTTTGGTTCTGTAACCCGATGAAAACTCTAGCCAATTGGATGTAAGAACCCTTGTCGATATGCAAATCCCTAGATCACATATACTAAAGCTTCAAATCAGCTCAAGGAAAAGTAAAATCTAGATTACCCAGTTGCTCAAATATCTTAAGGTATGAAAACTTATTTGAGATTCCAATCCCTCCATAAGTAAAATTAATCAAGTCACATGCAACATAAACTACATAGATGGCAAAGAGACATAGATCTAGGCTAAAAAGATGCACAAATTACTACTTTTTTCTAGCCTCTTTTACAAATACAATCATGAAACTCTTGTCCTTCCACGAGACGTTTCAATAGTTTAACCTTCAAAGTTTATGACCATAATTAACCATCATGTAAATGCATCTCAAAAGTAAATAAAAAGTATTAAAACTGAAAATACACTAATAAAACACTATAGATCCAAAAACAGTAGATAATCATCCACCTAAGAATTTGTAACCATCCTAGAATAAATGATGTCTCGCTTAAAATAGTTTAAATCCGTTAAGTTTGACTTTACTTTAACGTGGCGTAAAATGCAACTTAAGTTGAACTTTAACGAAACTTGACTTGTGTGTGTGGCATTGACATTGTTTAAGGTACTACAAGAAATGTGCTACCCTTTTTTCCTCTCTGCCATTTGAAATTCGAGGAGGAAGATAATTGATGTATTTAAAGTTTCCATGGGTGTTAAACTCGGATTATGCCTCGATATGTGGGTTTTCTTTTCTACGGATCTGTTGATAGCATAGGTTAAATAAATGTAGCTGACCCAAGTTACGAAACTCATATTTTATGCTACCTATAAACTTTTGCTGATCATAGATTTATATGAACTTCTATTTCCAATAGGCCCTTTTTTTGCACCATTTTGTTTAGGCGATGAGCCACACCTCAACTACAGGCTTGTTTTTGCTCAAGACTAAAATCTTTTTGAACATCTTACAAATCTTCAGGGCAACCTTTGTAGTAGCGGAAGCGTGTCTAATTGCGGGTGCAGCGAAAAATGCATACCATACAAAGTATCGAGGAATGATATATGCTCAAAACTTAGCATGTGAAACATTAAGGAAAGGAGTGTTCATTGCTGGGGCAGTGTTTGTGGTTGCAACCATGATTCTTAATGTGTATTACTACATGTACTTCACCAAGGCAACATCTTCTTCTCAAGTATCGCACAAAGCAAAGCGTTCGAGTTCAACGGTTGGGATGACAGGGTATGCCTAAATTCAATTCAATTCAAATGTGATAGGCTGGTTAAAGCTTCCATGATGGCCTTCATTGGTGGGTTGGTGATGTTTATGATTATTACTGATTGTGATATATAGTTTCATAGTCACTTTTTGTGGTTAAGATATGTAAACAAGTCATGTAAGAACAGAAAATGGTTTGCTCAAAATTCTGCAGCAATTTTCAAGTGGTTTGAAGCTGAAAATTTGAAGGTTATATTGATTTATATATGGTGCTTTTGAAGCAGGCTTCAGAATGCTGCTCTGTCTGCTCATATTCCATTTCAATTGTTTTCATGGTAGGG

mRNA sequence

ACAAAGTATTGCCCACACTTTTCTCACTCGCAGTCTTAAGCTCTTGGGAGCCTCTCTCAGTTCTCCCTGGTTGCGATTTGTGAGAGAAATGGAAGGCAAAGGGTCGACTCTGGTTCATCTTCTTGTGGTGGTTTTGTGTTTAGTAGCTTTTGGGTTCTCCATTGCTGCCGAGAGACGAAGAAGTGTGGGGACTCTGTTTGAAGACAAGGAAAGGAACGCGACCTACTGTGTGTACGACTCGGATGTGGCAACTGGTTATGGTGTAGGAGGTTTCTTATTTCTTCTCTCTGGTGAATCATTGCTGATGGGTGTCACAAAGTGCATGTGTTTTGGGAGACCTTTAACCCCGGGAGGAAATCGGGCATGGGCTATTATTTACTTTTTATCCTCATGGGCAACCTTTGTAGTAGCGGAAGCGTGTCTAATTGCGGGTGCAGCGAAAAATGCATACCATACAAAGTATCGAGGAATGATATATGCTCAAAACTTAGCATGTGAAACATTAAGGAAAGGAGTGTTCATTGCTGGGGCAGTGTTTGTGGTTGCAACCATGATTCTTAATGTGTATTACTACATGTACTTCACCAAGGCAACATCTTCTTCTCAAGTATCGCACAAAGCAAAGCGTTCGAGTTCAACGGTTGGGATGACAGGGTATGCCTAAATTCAATTCAATTCAAATGTGATAGGCTGGTTAAAGCTTCCATGATGGCCTTCATTGGTGGGTTGGTGATGTTTATGATTATTACTGATTGTGATATATAGTTTCATAGTCACTTTTTGTGGTTAAGATATGTAAACAAGTCATGTAAGAACAGAAAATGGTTTGCTCAAAATTCTGCAGCAATTTTCAAGTGGTTTGAAGCTGAAAATTTGAAGGTTATATTGATTTATATATGGTGCTTTTGAAGCAGGCTTCAGAATGCTGCTCTGTCTGCTCATATTCCATTTCAATTGTTTTCATGGTAGGG

Coding sequence (CDS)

ATGGAAGGCAAAGGGTCGACTCTGGTTCATCTTCTTGTGGTGGTTTTGTGTTTAGTAGCTTTTGGGTTCTCCATTGCTGCCGAGAGACGAAGAAGTGTGGGGACTCTGTTTGAAGACAAGGAAAGGAACGCGACCTACTGTGTGTACGACTCGGATGTGGCAACTGGTTATGGTGTAGGAGGTTTCTTATTTCTTCTCTCTGGTGAATCATTGCTGATGGGTGTCACAAAGTGCATGTGTTTTGGGAGACCTTTAACCCCGGGAGGAAATCGGGCATGGGCTATTATTTACTTTTTATCCTCATGGGCAACCTTTGTAGTAGCGGAAGCGTGTCTAATTGCGGGTGCAGCGAAAAATGCATACCATACAAAGTATCGAGGAATGATATATGCTCAAAACTTAGCATGTGAAACATTAAGGAAAGGAGTGTTCATTGCTGGGGCAGTGTTTGTGGTTGCAACCATGATTCTTAATGTGTATTACTACATGTACTTCACCAAGGCAACATCTTCTTCTCAAGTATCGCACAAAGCAAAGCGTTCGAGTTCAACGGTTGGGATGACAGGGTATGCCTAA

Homology

[Close]

BLAST of CmoCh04G021460 vs. TrEMBL
Match: A0A0A0KQ16_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G373210 PE=4 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 1.7e-93
Identity = 178/191 (93.19%), Postives = 183/191 (95.81%), Query Frame = 1


Query: 1   MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKERNATYCVYDSDVATGYGVG 60
           MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDK+RNATYCVY+SDVATGYGVG
Sbjct: 1   MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKQRNATYCVYESDVATGYGVG 60

Query: 61  GFLFLLSGESLLMGVTKCMCFGRPLTPGGNRAWAIIYFLSSWATFVVAEACLIAGAAKNA 120
            FLFLLSG+SLLMGVTKCMCFG+PLTPGGNRAW IIYFLSS ATF+VAEACLIAGA KNA
Sbjct: 61  AFLFLLSGQSLLMGVTKCMCFGKPLTPGGNRAWTIIYFLSSGATFLVAEACLIAGATKNA 120

Query: 121 YHTKYRGMIYAQNLACETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSSQVSHKAKR 180
           YHTKYRGMIYAQNL CETLRKGVFIAGAVFVVATMILNVYYYMYFTKAT SSQ SHKA R
Sbjct: 121 YHTKYRGMIYAQNLPCETLRKGVFIAGAVFVVATMILNVYYYMYFTKAT-SSQTSHKANR 180

Query: 181 SSSTVGMTGYA 192
           SSSTVGMTGYA
Sbjct: 181 SSSTVGMTGYA 190

[Close]

BLAST of CmoCh04G021460 vs. TrEMBL
Match: V7C938_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G035600g PE=4 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 2.4e-84
Identity = 159/190 (83.68%), Postives = 173/190 (91.05%), Query Frame = 1


Query: 2   EGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKERNATYCVYDSDVATGYGVGG 61
           EGKGSTLVHLLVVVL LVAFGF+IAAERRRSVGT+++ ++ N TYC Y SDVATGYGVG 
Sbjct: 3   EGKGSTLVHLLVVVLSLVAFGFAIAAERRRSVGTMYKIEKTNETYCSYSSDVATGYGVGA 62

Query: 62  FLFLLSGESLLMGVTKCMCFGRPLTPGGNRAWAIIYFLSSWATFVVAEACLIAGAAKNAY 121
           FLFLLSGESLLMGVTKCMCFGRPLTPGGNRAW+IIYFLSSW TF+VAEACLIAGA KNAY
Sbjct: 63  FLFLLSGESLLMGVTKCMCFGRPLTPGGNRAWSIIYFLSSWITFLVAEACLIAGATKNAY 122

Query: 122 HTKYRGMIYAQNLACETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSSQVSHKAKRS 181
           HTKYRGM+YAQN +CE LRKGVF+AGAVF+VATMILNVYYYMYFTKA  ++ VSHKA R 
Sbjct: 123 HTKYRGMVYAQNFSCEALRKGVFVAGAVFIVATMILNVYYYMYFTKAI-TTPVSHKANRV 182

Query: 182 SSTVGMTGYA 192
           SSTVGM GYA
Sbjct: 183 SSTVGMAGYA 191

[Close]

BLAST of CmoCh04G021460 vs. TrEMBL
Match: A0A0S3T2Q2_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.10G076900 PE=4 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 3.2e-84
Identity = 160/190 (84.21%), Postives = 173/190 (91.05%), Query Frame = 1


Query: 2   EGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKERNATYCVYDSDVATGYGVGG 61
           EG+GSTLVHLLVVVL LVAFGF+IAAERRRSVGT+F+ ++ N TYC Y SDVATGYGVG 
Sbjct: 3   EGRGSTLVHLLVVVLSLVAFGFAIAAERRRSVGTMFKIEKTNETYCSYSSDVATGYGVGA 62

Query: 62  FLFLLSGESLLMGVTKCMCFGRPLTPGGNRAWAIIYFLSSWATFVVAEACLIAGAAKNAY 121
           FLFLLSGESLLMGVTKCMCFGRPLTPGGNRAW+IIYFLSSW TF+VAEACLIAGA KNAY
Sbjct: 63  FLFLLSGESLLMGVTKCMCFGRPLTPGGNRAWSIIYFLSSWITFLVAEACLIAGATKNAY 122

Query: 122 HTKYRGMIYAQNLACETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSSQVSHKAKRS 181
           HTKYRGMI AQN +CE LRKGVF+AGAVF+VATMILNVYYYMYFTKAT ++ VSHKA R 
Sbjct: 123 HTKYRGMILAQNFSCEALRKGVFVAGAVFIVATMILNVYYYMYFTKAT-TTPVSHKANRV 182

Query: 182 SSTVGMTGYA 192
           SSTVGM GYA
Sbjct: 183 SSTVGMAGYA 191

[Close]

BLAST of CmoCh04G021460 vs. TrEMBL
Match: D7T946_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g03560 PE=4 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 3.2e-84
Identity = 161/190 (84.74%), Postives = 175/190 (92.11%), Query Frame = 1


Query: 2   EGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKERNATYCVYDSDVATGYGVGG 61
           EGKGSTLVHL+VVVL LVAFGF++AAERRRSVGT+  D +RNATYCVY+SDVATGYGVGG
Sbjct: 3   EGKGSTLVHLVVVVLSLVAFGFAVAAERRRSVGTIVTD-DRNATYCVYNSDVATGYGVGG 62

Query: 62  FLFLLSGESLLMGVTKCMCFGRPLTPGGNRAWAIIYFLSSWATFVVAEACLIAGAAKNAY 121
           FLFLL+ ESLLMGVTKCMCFGRPL PGGNRAW+IIYF+SSW TF+VAEACLIAGA KNAY
Sbjct: 63  FLFLLTSESLLMGVTKCMCFGRPLAPGGNRAWSIIYFVSSWMTFLVAEACLIAGATKNAY 122

Query: 122 HTKYRGMIYAQNLACETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSSQVSHKAKRS 181
           HTKYRGMIYAQN +CETLRKGVFIAGAVFVVATMILNVYYYMYF+KAT  +Q   KA R+
Sbjct: 123 HTKYRGMIYAQNFSCETLRKGVFIAGAVFVVATMILNVYYYMYFSKAT-DTQAVRKANRA 182

Query: 182 SSTVGMTGYA 192
           SSTVGMTGYA
Sbjct: 183 SSTVGMTGYA 190

[Close]

BLAST of CmoCh04G021460 vs. TrEMBL
Match: M5XF15_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011926mg PE=4 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 7.0e-84
Identity = 157/190 (82.63%), Postives = 172/190 (90.53%), Query Frame = 1


Query: 2   EGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKERNATYCVYDSDVATGYGVGG 61
           EGKGSTLVHLLV+VL LVAFGF+IAAER+RSVG + +D   N TYCVY+SDVATGYGVGG
Sbjct: 3   EGKGSTLVHLLVIVLSLVAFGFAIAAERQRSVGRIEKDDRTNETYCVYNSDVATGYGVGG 62

Query: 62  FLFLLSGESLLMGVTKCMCFGRPLTPGGNRAWAIIYFLSSWATFVVAEACLIAGAAKNAY 121
           FLFLLSGESLLMG+TKCMCFGRPL PGGNRAW+IIYF+SSW TF+VAEACLIAGA KNAY
Sbjct: 63  FLFLLSGESLLMGITKCMCFGRPLAPGGNRAWSIIYFVSSWTTFLVAEACLIAGATKNAY 122

Query: 122 HTKYRGMIYAQNLACETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSSQVSHKAKRS 181
           HTKYRGMIYAQN +CE LRKGVFI+GAVFVV TMILNVYYYMYFTKAT ++Q +HKA  S
Sbjct: 123 HTKYRGMIYAQNFSCEALRKGVFISGAVFVVVTMILNVYYYMYFTKAT-TTQAAHKANHS 182

Query: 182 SSTVGMTGYA 192
           SSTVGM GYA
Sbjct: 183 SSTVGMAGYA 191

[Close]

BLAST of CmoCh04G021460 vs. TAIR10
Match: AT1G13380.1 (AT1G13380.1 Protein of unknown function (DUF1218))

HSP 1 Score: 276.9 bits (707), Expect = 9.1e-75
Identity = 139/190 (73.16%), Postives = 158/190 (83.16%), Query Frame = 1


Query: 2   EGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKERNATYCVYDSDVATGYGVGG 61
           EGK STLV +LVV L LVAFGFSIAAERRRS+G   +D   N T+CVYDSDVATGYGVG 
Sbjct: 3   EGKASTLVFILVVALSLVAFGFSIAAERRRSIGKSIQDPITNTTFCVYDSDVATGYGVGA 62

Query: 62  FLFLLSGESLLMGVTKCMCFGRPLTPGGNRAWAIIYFLSSWATFVVAEACLIAGAAKNAY 121
           FLFLLS ESLLM VTKCMCFGRPL PG +RAW+IIYF+SSW TF+VAEAC+IAGA KNAY
Sbjct: 63  FLFLLSSESLLMSVTKCMCFGRPLAPGSDRAWSIIYFISSWMTFLVAEACVIAGATKNAY 122

Query: 122 HTKYRGMIYAQNLACETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSSQVSHKAKRS 181
           HTKY   + +Q  +C +LRKG+FIAGAVF+VATM+LNVYYYMYFTK+ SS   +HKA RS
Sbjct: 123 HTKY---LSSQTFSCASLRKGIFIAGAVFIVATMVLNVYYYMYFTKSVSSPP-AHKANRS 182

Query: 182 SSTVGMTGYA 192
           SS +GM GYA
Sbjct: 183 SSNIGMAGYA 188

[Close]

BLAST of CmoCh04G021460 vs. TAIR10
Match: AT4G27435.1 (AT4G27435.1 Protein of unknown function (DUF1218))

HSP 1 Score: 173.3 bits (438), Expect = 1.4e-43
Identity = 85/167 (50.90%), Postives = 115/167 (68.86%), Query Frame = 1


Query: 6   STLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKERNATYCVYDSDVATGYGVGGFLFL 65
           S +V  +V V  L+AFG ++AAE+RRS   + +D E    YCVYDSD ATGYGVG FLF 
Sbjct: 3   SKIVSAIVFVFNLIAFGLAVAAEQRRSTARVVQDTEVQYNYCVYDSDRATGYGVGAFLFS 62

Query: 66  LSGESLLMGVTKCMCFGRPLTPGGNRAWAIIYFLSSWATFVVAEACLIAGAAKNAYHTKY 125
           ++ + L+M V++C C G+PL PGG+RA A+I F+ SW  F++AE CL+AG+ +NAYHTKY
Sbjct: 63  VASQILIMLVSRCFCCGKPLKPGGSRALALILFIVSWMFFLIAEICLLAGSVENAYHTKY 122

Query: 126 RGMIYAQNLACETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSS 173
           R M       C+TLRKGVF AGA FV    I++ +YY ++  A  +S
Sbjct: 123 RTMFMDNPPDCQTLRKGVFAAGASFVFFNAIVSQFYYFFYFSAAEAS 169

[Close]

BLAST of CmoCh04G021460 vs. TAIR10
Match: AT1G61065.1 (AT1G61065.1 Protein of unknown function (DUF1218))

HSP 1 Score: 162.9 bits (411), Expect = 1.9e-40
Identity = 79/163 (48.47%), Postives = 115/163 (70.55%), Query Frame = 1


Query: 6   STLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKERNATYCVYDSDVATGYGVGGFLFL 65
           S L+ LLV V  L+AFG ++AAE+RR+   +  +  R+ +YCVYD D+ATG GVG FL L
Sbjct: 3   SVLLLLLVFVFDLIAFGLAVAAEQRRTTWQISRES-RDLSYCVYDKDIATGLGVGSFLVL 62

Query: 66  LSGESLLMGVTKCMCFGRPLTPGGNRAWAIIYFLSSWATFVVAEACLIAGAAKNAYHTKY 125
           L+ + L+M  ++C+C GR LTP G+R+WAI  F+++W  F +A+ CL+AG+ +NAYHTKY
Sbjct: 63  LASQLLIMVASRCLCCGRALTPSGSRSWAIFLFITTWVFFFIAQVCLLAGSVRNAYHTKY 122

Query: 126 RGMIYAQNLACETLRKGVFIAGAVFVVATMILNVYYYMYFTKA 169
           R      + +C +LRKGVF AGA F+V T I++  YY+  ++A
Sbjct: 123 RVYFGNTSPSCRSLRKGVFGAGAAFIVLTGIVSELYYVTLSRA 164

[Close]

BLAST of CmoCh04G021460 vs. TAIR10
Match: AT3G15480.1 (AT3G15480.1 Protein of unknown function (DUF1218))

HSP 1 Score: 160.2 bits (404), Expect = 1.2e-39
Identity = 78/169 (46.15%), Postives = 116/169 (68.64%), Query Frame = 1


Query: 6   STLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKERNATYCVYDSDVATGYGVGGFLFL 65
           S LV ++V +L L+A G +IAAE+RRSVG +  D+++   YCVY +D+AT YG G F+ L
Sbjct: 3   SKLVVIIVFILDLIAVGLAIAAEQRRSVGKVETDRDKQYDYCVYGTDIATSYGAGAFVLL 62

Query: 66  LSGESLLMGVTKCMCFGRPLTPGGNRAWAIIYFLSSWATFVVAEACLIAGAAKNAYHTKY 125
              + L+M  ++C C G+ L PGG+RA AII FL  W  F++AE CL+A + +NAYHT+Y
Sbjct: 63  FVSQVLIMAASRCFCCGKSLNPGGSRACAIILFLICWVFFLIAEMCLLAASIRNAYHTQY 122

Query: 126 RGMIYAQN-LACETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSSQ 174
           R M   ++  +CE +RKGVF AGA F + T I++ +YY+ +++A  + Q
Sbjct: 123 RKMWKVEDPPSCEVIRKGVFAAGAAFTLFTAIVSQFYYVCYSRARDAYQ 171

[Close]

BLAST of CmoCh04G021460 vs. TAIR10
Match: AT1G52910.1 (AT1G52910.1 Protein of unknown function (DUF1218))

HSP 1 Score: 157.1 bits (396), Expect = 1.0e-38
Identity = 78/172 (45.35%), Postives = 113/172 (65.70%), Query Frame = 1


Query: 6   STLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKERNATYCVYDSDVATGYGVGGFLFL 65
           S LV ++V +L L+A G +IAAE+RRSVG +  D E+   +C Y SD+AT YG G F+ L
Sbjct: 3   SKLVIIIVFILDLIAVGLAIAAEQRRSVGKVVPDGEKEFEHCEYGSDIATSYGAGAFVLL 62

Query: 66  LSGESLLMGVTKCMCFGRPLTPGGNRAWAIIYFLSSWATFVVAEACLIAGAAKNAYHTKY 125
              + ++M  ++C C G+ L PGG+RA  I+ FL  W  F++AE CL+AG+ +NAYHT Y
Sbjct: 63  FISQVIIMVASRCFCCGKALKPGGSRACGIMLFLICWVFFLIAEVCLLAGSIRNAYHTTY 122

Query: 126 RGMIYAQN-LACETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSSQVSH 177
           R M   +N  +CE +RKGVF AGA F + T I++ +YY+ +++A    Q  H
Sbjct: 123 RRMWNIENPPSCEVIRKGVFAAGASFALFTAIVSQFYYISYSRARDGYQTPH 174

[Close]

BLAST of CmoCh04G021460 vs. NCBI nr
Match: gi|659131649|ref|XP_008465787.1| (PREDICTED: uncharacterized protein LOC103503388 [Cucumis melo])

HSP 1 Score: 351.3 bits (900), Expect = 1.1e-93
Identity = 179/191 (93.72%), Postives = 183/191 (95.81%), Query Frame = 1


Query: 1   MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKERNATYCVYDSDVATGYGVG 60
           MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDK+RNATYCVY+SDVATGYGVG
Sbjct: 1   MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKQRNATYCVYESDVATGYGVG 60

Query: 61  GFLFLLSGESLLMGVTKCMCFGRPLTPGGNRAWAIIYFLSSWATFVVAEACLIAGAAKNA 120
            FLFLLSG+SLLMGVTKCMCFGRPLTPGGNRAW IIYFLSS ATF+VAEACLIAGA KNA
Sbjct: 61  AFLFLLSGQSLLMGVTKCMCFGRPLTPGGNRAWTIIYFLSSGATFLVAEACLIAGATKNA 120

Query: 121 YHTKYRGMIYAQNLACETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSSQVSHKAKR 180
           YHTKYRGMIYAQNL CETLRKGVFIAGAVFVVATMILNVYYYMYFTKAT SSQ SHKA R
Sbjct: 121 YHTKYRGMIYAQNLPCETLRKGVFIAGAVFVVATMILNVYYYMYFTKAT-SSQASHKANR 180

Query: 181 SSSTVGMTGYA 192
           SSSTVGMTGYA
Sbjct: 181 SSSTVGMTGYA 190

[Close]

BLAST of CmoCh04G021460 vs. NCBI nr
Match: gi|449445144|ref|XP_004140333.1| (PREDICTED: uncharacterized protein LOC101221296 [Cucumis sativus])

HSP 1 Score: 350.1 bits (897), Expect = 2.4e-93
Identity = 178/191 (93.19%), Postives = 183/191 (95.81%), Query Frame = 1


Query: 1   MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKERNATYCVYDSDVATGYGVG 60
           MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDK+RNATYCVY+SDVATGYGVG
Sbjct: 1   MEGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKQRNATYCVYESDVATGYGVG 60

Query: 61  GFLFLLSGESLLMGVTKCMCFGRPLTPGGNRAWAIIYFLSSWATFVVAEACLIAGAAKNA 120
            FLFLLSG+SLLMGVTKCMCFG+PLTPGGNRAW IIYFLSS ATF+VAEACLIAGA KNA
Sbjct: 61  AFLFLLSGQSLLMGVTKCMCFGKPLTPGGNRAWTIIYFLSSGATFLVAEACLIAGATKNA 120

Query: 121 YHTKYRGMIYAQNLACETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSSQVSHKAKR 180
           YHTKYRGMIYAQNL CETLRKGVFIAGAVFVVATMILNVYYYMYFTKAT SSQ SHKA R
Sbjct: 121 YHTKYRGMIYAQNLPCETLRKGVFIAGAVFVVATMILNVYYYMYFTKAT-SSQTSHKANR 180

Query: 181 SSSTVGMTGYA 192
           SSSTVGMTGYA
Sbjct: 181 SSSTVGMTGYA 190

[Close]

BLAST of CmoCh04G021460 vs. NCBI nr
Match: gi|694311229|ref|XP_009356779.1| (PREDICTED: uncharacterized protein LOC103947586 [Pyrus x bretschneideri])

HSP 1 Score: 325.5 bits (833), Expect = 6.3e-86
Identity = 163/190 (85.79%), Postives = 176/190 (92.63%), Query Frame = 1


Query: 2   EGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKERNATYCVYDSDVATGYGVGG 61
           EGKGSTLVHLLVVVL LVAFGF+IAAER+RSVG +  D + N TYCVY+SDVATGYGVGG
Sbjct: 3   EGKGSTLVHLLVVVLSLVAFGFAIAAERQRSVGEIRTDVQTNQTYCVYNSDVATGYGVGG 62

Query: 62  FLFLLSGESLLMGVTKCMCFGRPLTPGGNRAWAIIYFLSSWATFVVAEACLIAGAAKNAY 121
           FLFLLSGESLLMGVTKCMCFGRPL PGGNRAW+IIYF+SSWATF+VAEACLIAGA KNAY
Sbjct: 63  FLFLLSGESLLMGVTKCMCFGRPLAPGGNRAWSIIYFVSSWATFLVAEACLIAGATKNAY 122

Query: 122 HTKYRGMIYAQNLACETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSSQVSHKAKRS 181
           HTKYRGMIYAQN +CE LRKGVFI+GAVFVVATMILNVYYYMYFTKAT ++Q +HKA RS
Sbjct: 123 HTKYRGMIYAQNFSCEALRKGVFISGAVFVVATMILNVYYYMYFTKAT-AAQATHKANRS 182

Query: 182 SSTVGMTGYA 192
           SSTVGMTGYA
Sbjct: 183 SSTVGMTGYA 191

[Close]

BLAST of CmoCh04G021460 vs. NCBI nr
Match: gi|658008952|ref|XP_008339673.1| (PREDICTED: uncharacterized protein LOC103402700 [Malus domestica])

HSP 1 Score: 324.3 bits (830), Expect = 1.4e-85
Identity = 162/190 (85.26%), Postives = 175/190 (92.11%), Query Frame = 1


Query: 2   EGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKERNATYCVYDSDVATGYGVGG 61
           EGKGSTLVHLLVVVL LVAFGF+IAAER+RSVG +  D + N TYCVY+SDVATGYGVGG
Sbjct: 3   EGKGSTLVHLLVVVLSLVAFGFAIAAERQRSVGEIRTDVQXNQTYCVYNSDVATGYGVGG 62

Query: 62  FLFLLSGESLLMGVTKCMCFGRPLTPGGNRAWAIIYFLSSWATFVVAEACLIAGAAKNAY 121
           FLFLLSGESLLMGVTKCMCFGRPL PGGNRAW+IIYF SSWATF+VAEACLIAGA KNAY
Sbjct: 63  FLFLLSGESLLMGVTKCMCFGRPLAPGGNRAWSIIYFXSSWATFLVAEACLIAGATKNAY 122

Query: 122 HTKYRGMIYAQNLACETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSSQVSHKAKRS 181
           HTKYRGMIYAQN +CE LRKGVF++GAVFVVATMILNVYYYMYFTKAT ++Q +HKA RS
Sbjct: 123 HTKYRGMIYAQNFSCEALRKGVFVSGAVFVVATMILNVYYYMYFTKAT-AAQATHKANRS 182

Query: 182 SSTVGMTGYA 192
           SSTVGMTGYA
Sbjct: 183 SSTVGMTGYA 191

[Close]

BLAST of CmoCh04G021460 vs. NCBI nr
Match: gi|951070041|ref|XP_014490525.1| (PREDICTED: uncharacterized protein LOC106753249 [Vigna radiata var. radiata])

HSP 1 Score: 322.4 bits (825), Expect = 5.3e-85
Identity = 161/190 (84.74%), Postives = 174/190 (91.58%), Query Frame = 1


Query: 2   EGKGSTLVHLLVVVLCLVAFGFSIAAERRRSVGTLFEDKERNATYCVYDSDVATGYGVGG 61
           EG+GSTLVHLLVVVL LVAFGF+IAAERRRSVGT+F+ ++ N TYC Y SDVATGYGVG 
Sbjct: 3   EGRGSTLVHLLVVVLSLVAFGFAIAAERRRSVGTMFKIEKTNETYCSYSSDVATGYGVGA 62

Query: 62  FLFLLSGESLLMGVTKCMCFGRPLTPGGNRAWAIIYFLSSWATFVVAEACLIAGAAKNAY 121
           FLFLLSGESLLMGVTKCMCFGRPLTPGGNRAW+IIYFLSSW TF+VAEACLIAGA KNAY
Sbjct: 63  FLFLLSGESLLMGVTKCMCFGRPLTPGGNRAWSIIYFLSSWITFLVAEACLIAGATKNAY 122

Query: 122 HTKYRGMIYAQNLACETLRKGVFIAGAVFVVATMILNVYYYMYFTKATSSSQVSHKAKRS 181
           HTKYRGMIYAQN +CE LRKGVF+AGAVF+VATMILNVYYYMYFTKAT ++ VSHKA R 
Sbjct: 123 HTKYRGMIYAQNFSCEALRKGVFVAGAVFIVATMILNVYYYMYFTKAT-TTPVSHKANRV 182

Query: 182 SSTVGMTGYA 192
           SSTVGM GYA
Sbjct: 183 SSTVGMAGYA 191

The following BLAST results are available for this feature:

BLAST of CmoCh04G021460 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh04G021460 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KQ16_CUCSA	1.7e-93	93.19	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G373210 PE=4 SV=1	[more]
V7C938_PHAVU	2.4e-84	83.68	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G035600g PE=4 SV=1	[more]
A0A0S3T2Q2_PHAAN	3.2e-84	84.21	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.10G076900 PE=...	[more]
D7T946_VITVI	3.2e-84	84.74	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g03560 PE=4 SV=...	[more]
M5XF15_PRUPE	7.0e-84	82.63	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011926mg PE=4 SV=1	[more]

BLAST of CmoCh04G021460 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G13380.1	9.1e-75	73.16	Protein of unknown function (DUF1218)	[more]
AT4G27435.1	1.4e-43	50.90	Protein of unknown function (DUF1218)	[more]
AT1G61065.1	1.9e-40	48.47	Protein of unknown function (DUF1218)	[more]
AT3G15480.1	1.2e-39	46.15	Protein of unknown function (DUF1218)	[more]
AT1G52910.1	1.0e-38	45.35	Protein of unknown function (DUF1218)	[more]

BLAST of CmoCh04G021460 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659131649\|ref\|XP_008465787.1\|	1.1e-93	93.72	PREDICTED: uncharacterized protein LOC103503388 [Cucumis melo]	[more]
gi\|449445144\|ref\|XP_004140333.1\|	2.4e-93	93.19	PREDICTED: uncharacterized protein LOC101221296 [Cucumis sativus]	[more]
gi\|694311229\|ref\|XP_009356779.1\|	6.3e-86	85.79	PREDICTED: uncharacterized protein LOC103947586 [Pyrus x bretschneideri]	[more]
gi\|658008952\|ref\|XP_008339673.1\|	1.4e-85	85.26	PREDICTED: uncharacterized protein LOC103402700 [Malus domestica]	[more]
gi\|951070041\|ref\|XP_014490525.1\|	5.3e-85	84.74	PREDICTED: uncharacterized protein LOC106753249 [Vigna radiata var. radiata]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR009606	DUF1218

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G021460.1	CmoCh04G021460.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009606	Protein of unknown function DUF1218	PFAM	PF06749	DUF1218	coord: 62..156 score: 3.6
None	No IPR available	PANTHER	PTHR31769	FAMILY NOT NAMED	coord: 4..190 score: 2.2E
None	No IPR available	PANTHER	PTHR31769:SF5	EXPRESSED PROTEIN	coord: 4..190 score: 2.2E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G021460	CmaCh04G020470	Cucurbita maxima (Rimu)	cmacmoB729
CmoCh04G021460	Lsi09G010370	Bottle gourd (USVL1VR-Ls)	cmolsiB612
CmoCh04G021460	Lsi09G006230	Bottle gourd (USVL1VR-Ls)	cmolsiB613
CmoCh04G021460	Cp4.1LG01g17860	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G021460	MELO3C005341.2	Melon (DHL92) v3.6.1	cmomedB719
CmoCh04G021460	Cla97C01G006160	Watermelon (97103) v2	cmowmbB680
CmoCh04G021460	Bhi12G000737	Wax gourd	cmowgoB0827
CmoCh04G021460	Carg27854	Silver-seed gourd	carcmoB0896

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh04G021460	CmoCh15G010320	Cucurbita moschata (Rifu)	cmocmoB270

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G021460	Wax gourd	cmowgoB0899
CmoCh04G021460	Wax gourd	cmowgoB0909
CmoCh04G021460	Cucurbita moschata (Rifu)	cmocmoB339
CmoCh04G021460	Cucurbita moschata (Rifu)	cmocmoB467
CmoCh04G021460	Cucumber (Gy14) v1	cgycmoB0795
CmoCh04G021460	Cucurbita maxima (Rimu)	cmacmoB421
CmoCh04G021460	Cucurbita maxima (Rimu)	cmacmoB737
CmoCh04G021460	Wild cucumber (PI 183967)	cmocpiB765
CmoCh04G021460	Cucumber (Chinese Long) v2	cmocuB755
CmoCh04G021460	Melon (DHL92) v3.5.1	cmomeB640
CmoCh04G021460	Watermelon (Charleston Gray)	cmowcgB656
CmoCh04G021460	Watermelon (97103) v1	cmowmB695
CmoCh04G021460	Bottle gourd (USVL1VR-Ls)	cmolsiB668
CmoCh04G021460	Bottle gourd (USVL1VR-Ls)	cmolsiB677
CmoCh04G021460	Cucumber (Gy14) v2	cgybcmoB637
CmoCh04G021460	Cucumber (Gy14) v2	cgybcmoB671
CmoCh04G021460	Melon (DHL92) v3.6.1	cmomedB728
CmoCh04G021460	Melon (DHL92) v3.6.1	cmomedB744
CmoCh04G021460	Silver-seed gourd	carcmoB1398
CmoCh04G021460	Cucumber (Chinese Long) v3	cmocucB0894
CmoCh04G021460	Watermelon (97103) v2	cmowmbB732
CmoCh04G021460	Watermelon (97103) v2	cmowmbB740