Cp4.1LG01g17050 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g17050
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
Description50S ribosomal protein L15
LocationCp4.1LG01 : 11345819 .. 11350663 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGTCGTTCAAAGGAAAAGTAAGGAAACCTGATTCCCCAATTTCAGTCCCCCTCCCTACTCAGTCGCTTTCTTCTTCTTTGGTGAGCCTTCCACCGGCGGCGTTTGTCGAGCAGCACAACCCACGAGCTCTAGTTCTACGCGACGGAGGTAACCTGCGGCGACAGCACCTACACTCCGACAAGCAGATCCTCACAACCTCGACGGCGTCTTGTTGTGCGCGACGACACCCACGCAGCGGCAGCAACCTAAACGTCCAGACTCCTATTGCTCTGCAGCGACGCATCTTGCCGACGATTCGTAGAGTTCCATTTGCTCTACGGTGCGAGCAGATTCCAGGCACGAATAGAAACGCCTCTAAACTCGCGGGTTCGACGTATTTATTAGCGAGCTAATTTCAGCAGCAACCTACTCCTCAATTGATTTTGATTCAGTTTTCTCGTATCCCGTAGAAATCAGATTTGCGATTTTGAACTTGATCACGTTCCAGCAAAGATTTCAGTCCTTATTGGTAACGTTTCATGGGTACATTTGCTTTTTCTTTCTTACAGATTGAATTTTAAGTGTTTGAATTGGATTCTATTGCTTGATGCTCTTCTGTTTTAGGTTCTTACTAGTTTCGGACTCCTTCGAACACATTTCAGCAAAGACCCAAGCTCTTTTGGTAAGATTTGGGTGGTAACGGTACTTTTAATCCATTTCAAACTCGATTAAAATGGTTTAGATTAATCTCTAACCCTTGGGAACTCTTGGGCGTAGATTTAGACTTCATTAGGAGAGTTCGAACTTAGGTTTAAGGTCATATTTGGTAAGAGCGCCCCTCTAGAATACAATTTCAGTTTGAATAAGGATTTTGAACTAATGCTAGCGTCCAAGTATTCCTTTTTGTTTAGGGCCCCTTTGAACTAATCTAGGAGCACTATAGGCATGTATAATTTTACGTTGTTTGATAGTATGTTGTTCTCTATATTTAGTATTTATGATGTAAATATTTGATGCTCTTAAACCTCTATGTGCTTTGGATGGTTAATCATGCTCGAATGCTGTGATGACTAACATGCTGGGAAGCCGTTGATGATCCATTGTTTATGCATGTGTTATAGTTGAGAATGTCTAATTCTGCATATGATTTCAGCTGAGGGCGTGTTGTTGTTCATGTGAGAAAAAGGTTAGAGTACTATGTGCATTTATAAAGGAAAGTAGGGTGCATATCGGTGTGCCTCGGGTGAAAATGGTTGAGGGGTGATATTTAATCATTGGATTAAGAGGAGCATCGAGACCTTGGGTAAAAATGGTCAAGGGTCTATGCGAGTCTACAGAGACAAGTATTGGGGCTCATGAGAAGAAGGCACAATATGTTGCCAAGTTGTTGAGGCCTTGGATAAAAATGGGCGACGGTCAATGCATACTTCAAGGCCTCAGGTAGGTCAAGGGTCGATGCATAGTTTGAGGCCTTGGGTAAGTCGATGTCGAACACTGTGTGCAGTAGAAAACATTGAGGCCCTAGATAAAAAGGTAAGGGGTCGACATATCTCGAAGGAATCCGTCTCTAAGAATTTTGGTGAAGGCTAAATATGAGTGTTGAGTGAGCTTGTCGAGCTTGAGTAGACATTGAGTGTGCATTACATGATGTGCTGATTCATGCATTTAGTATTTTGTAATTGTTATTTATTTTACACGTATGATGAGCATGTGCAATTTTTGTGAATAGCATGATGTGTGCCTTGTATATTATTTGGTGGCTCCTCAAGCATGAGTTGCTTACTTAGCATGTGTTATGTACAGACCCACCAACATATTTTGTAGGTGGTGATTATTTTTACTCAGCATTGTGTTATGTACTAATCCACCAACGATTAGTTTGTGTTTGATTATTTATCTTATACCTCTATTCAACCCAACAAATGAATAAAAAAAAGACAAAGATTAACTTTATTAGATTTTTTCGATGCATCCCCAAGGTTTTGATATTGTGTTTGATGTTTTCTTTATCTTCGCTCTGAAATACCATACTGTATCTATGATTGAGGGTTGTAGGAACTCTATTCTTATTACCTCTACTTTGACTACATTATTTCTGCTTTTTTTTTTACTTTTTTTAACTTTTAATTTTCTACATAGACTCCTCACGTCTTATACTGTAATAGTTACATCATGTTTTGAATTATATTGGTGATTTTGTTAAGTGCTATTCTGTTCAGTAGGATATAAGGAAGAACCTATTTTAAAATACATATACATGGTTGAGCTAGATATTTTCCACTTGATATTCTGTATATTACAAAACTTAATCTATTCCATTCATAATGTAGCAATCATTTAGTCTCTATCCTGCATTGGCTTGAGGAACAGAGACAACTAGTGAAATTTATTATTCGATCTGTAAAAAGGAGAAGGAAATGCTACGAAGACGGCTGTGTTACTTTCTATCTAGCTCATTTGCTTCAGTTCGTACTAAACCCCCACCTGCTTTTGCAATAAACCAAGCAGTATCACGTCCATTCCTAGAGTTCCAGCGAAACCCTAGCCTTGATCGGAGTGTAGGTTTCCCTCTTTCTGGGAATGTCCTTGGTTTTCGAGCTTACAGCCTCTTGAGCTTAAATGATCTGAGAGACAAAGTTCCAAGGAAACAGAAGACGAGAAAGGGTCGTGGTATTGGTTCTGGGAAGGGGAAGACAGCAGGGAGAGGTCACAAGGGTCAAAAAGCGAGAGGTTCTGGGAAGCTAGGGTTTGAAGGGGGTCAAACCCCACTTCGTCGTAGGCTTCCTAAAAGAGGCTTTAAGAATCCTTTCAGCCTCACATTTCAGGTATTTGATTTGTGTTTTCATGTTATTGTTTTGTTGCTTGTGATCAGTATTTTAAAATGCCCACTAAGGTGTGCGCCTTGGTGTGCTTAAACCCAAGGCACGACCTATGTGCCTTGCTTCAAAGAAGTGAGTCTCCCTCATTGAAGCCCACTTGAGGCATGCGTCTTAGCACTTGTGTTGTGTGCCTTAACGCCTCAAACTCGATTTCTTTTTCTAATTTTCAAGGAAGAAATATATTAATATTCTTACATTCTCGAATAAAAGCTCTATTTTCTTGAACTTTGTATCATCTTATTATTCATCATACTATTTTTCTTCCTATCTTAAAATTTTATTTACATTTTTATTGTACGCCATTAAAAAAAGAAAGTCCATGCTTAAGGTCCCAAAAGACTATTGTGCTCCGGTGCACCTCGAGCTTTAGAAAACACTGCTTGTGATTATTATTTACTTCTCAATTACTTTGTTTTTTTTGGAGGAGTAAGATTAATTTAAAGATGCTCGTTTAACTTTATGCAATAGTTTGATGCCAAATTGTGTAATGAATTCTATTTTCATCTTGAAGAAAACAAGTCTTTAATATCGATATCTACTAGTAATTTTATTTCAGTAAATAGCATGTGATACGAAATTCATGTTGCATGATCTCTAAAAGAGTTGCCTTCTGCACTTTGCATTACTTACTGTATAACACAGTTGGTATCTTCTGATGTGAAGTCCCTAACAATATAATTTTGTCTAGTGCAAAAGACAATTCTTTTTGGGCATGATATTTTTTCCTAGAGTGTTATGATATTTCTTGATTCTTTTGTTTAATGACAGCCAGTTGGATTGGGAAAGATTGCTAAACTTATAAATGCTGGGAAAATTGATTCTTCTGAATTAATCACTATGAAAACACTCAAGGTATCATGACTTGTATCTTGACTAGTCTTATCAAAAGCCTGAAATACGTGTTTTCTTTTTAATATTGTATTTGATTTATTATCCTTACCATTGTGGAATAGGATACTGGTGCAATTGGAAAACAAATACAGGATGGGGTGAGGTTGATGGGACGTGGTGCTGAACAGATTAAGTGGCCAATTCACTTAGAGGTAAATCTTCAACAAAAAAATGTTCTTTTTTTCCTTTCTGTTCTGACGTTGACTTCTAAACCTATATGCTCCTTAGTTAAGCTCATATTTTGTATCAATTACTTATAAATCTGAGCTATCGTCATGCTGCCAATTTGAAGCTAGTGCACTCTTCTCGACGAAGAGATTCTAGTGTTGTCGATGTTCTTCCAGGGTTGCATCTAGCTGTCTTTCTAGTCTAGGTTGGGATCCAATTGCTTTCAGATTGCCCGTATTTGCTATAACAAAAGGAATATTTCTTCCGTTTGTGTAGCTTTGTAGACATTGTTATTTGCTTGTGATTGATGTGCTTAGGCAAGTTTTGTCATAGTTAGAGCTTTCAAGTCTCTCATCTTTAACCATTTGGATTGATCTCAATAGCCTCCGATCTAGCTTCCTCCTGTGCTCGGAACTAATCTTAAATACGTGATGTTTTCAGGTGTCAAGGGTCACTGTTAGGGCGAAGGCAGCGGTGGAAGCTGCCGGAGGGACTGTTAGAAGAGTGTATTACAATAAATTAGGCTTTCGGGCGCTGCTCACACCGGAGTGGTTCGAAAAGAAGGGTAGACTGTTACCACGAGCAGCTAGGCCACCCCCAAAGCAACAAGACAAAGTTGACAGCATTGGGCGCTTGCCTGCGCCCACTAAACCCATCCCTTTTTCGGTTGAAGATGGAGGAGAGGCAGCTTCCAGTTTGCCTGCCTAGGCAATCATGGTCATTCCCATGAAGGATTTTAACTTTCGATTGTCCCTTTGAAATGCATTTTGTAAGCCGGTAACCATTTTGTTTCTACATTTTTTTTAAAGGTTCAATGATGGACGGCCGCTCTTCACAGACGTTTTCAGGATTCCGGGTGGTAATAGAAATCACCTCATCTTATTAACTATCAAGTTCAATAAAGATAATATGTGCTTAACTATTAGAT

mRNA sequence

TGTCGTTCAAAGGAAAAGTAAGGAAACCTGATTCCCCAATTTCAGTCCCCCTCCCTACTCAGTCGCTTTCTTCTTCTTTGGTGAGCCTTCCACCGGCGGCGTTTGTCGAGCAGCACAACCCACGAGCTCTAGTTCTACGCGACGGAGGTAACCTGCGGCGACAGCACCTACACTCCGACAAGCAGATCCTCACAACCTCGACGGCGTCTTGTTGTGCGCGACGACACCCACGCAGCGGCAGCAACCTAAACGTCCAGACTCCTATTGCTCTGCAGCGACGCATCTTGCCGACGATTCGTAGAGTTCCATTTGCTCTACGGTGCGAGCAGATTCCAGGCACGAATAGAAACGCCTCTAAACTCGCGGGTTCGACGTATTTATTAGCGAGCTAATTTCAGCAGCAACCTACTCCTCAATTGATTTTGATTCAGTTTTCTCGTATCCCGTAGAAATCAGATTTGCGATTTTGAACTTGATCACGTTCCAGCAAAGATTTCAGTCCTTATTGGTTCTTACTAGTTTCGGACTCCTTCGAACACATTTCAGCAAAGACCCAAGCTCTTTTGCAATCATTTAGTCTCTATCCTGCATTGGCTTGAGGAACAGAGACAACTAGTGAAATTTATTATTCGATCTGTAAAAAGGAGAAGGAAATGCTACGAAGACGGCTGTGTTACTTTCTATCTAGCTCATTTGCTTCAGTTCGTACTAAACCCCCACCTGCTTTTGCAATAAACCAAGCAGTATCACGTCCATTCCTAGAGTTCCAGCGAAACCCTAGCCTTGATCGGAGTGTAGGTTTCCCTCTTTCTGGGAATGTCCTTGGTTTTCGAGCTTACAGCCTCTTGAGCTTAAATGATCTGAGAGACAAAGTTCCAAGGAAACAGAAGACGAGAAAGGGTCGTGGTATTGGTTCTGGGAAGGGGAAGACAGCAGGGAGAGGTCACAAGGGTCAAAAAGCGAGAGGTTCTGGGAAGCTAGGGTTTGAAGGGGGTCAAACCCCACTTCGTCGTAGGCTTCCTAAAAGAGGCTTTAAGAATCCTTTCAGCCTCACATTTCAGCCAGTTGGATTGGGAAAGATTGCTAAACTTATAAATGCTGGGAAAATTGATTCTTCTGAATTAATCACTATGAAAACACTCAAGGATACTGGTGCAATTGGAAAACAAATACAGGATGGGGTGAGGTTGATGGGACGTGGTGCTGAACAGATTAAGTGGCCAATTCACTTAGAGGTGTCAAGGGTCACTGTTAGGGCGAAGGCAGCGGTGGAAGCTGCCGGAGGGACTGTTAGAAGAGTGTATTACAATAAATTAGGCTTTCGGGCGCTGCTCACACCGGAGTGGTTCGAAAAGAAGGGTAGACTGTTACCACGAGCAGCTAGGCCACCCCCAAAGCAACAAGACAAAGTTGACAGCATTGGGCGCTTGCCTGCGCCCACTAAACCCATCCCTTTTTCGGTTGAAGATGGAGGAGAGGCAGCTTCCAGTTTGCCTGCCTAGGCAATCATGGTCATTCCCATGAAGGATTTTAACTTTCGATTGTCCCTTTGAAATGCATTTTGTAAGCCGGTAACCATTTTGTTTCTACATTTTTTTTAAAGGTTCAATGATGGACGGCCGCTCTTCACAGACGTTTTCAGGATTCCGGGTGGTAATAGAAATCACCTCATCTTATTAACTATCAAGTTCAATAAAGATAATATGTGCTTAACTATTAGAT

Coding sequence (CDS)

ATGCTACGAAGACGGCTGTGTTACTTTCTATCTAGCTCATTTGCTTCAGTTCGTACTAAACCCCCACCTGCTTTTGCAATAAACCAAGCAGTATCACGTCCATTCCTAGAGTTCCAGCGAAACCCTAGCCTTGATCGGAGTGTAGGTTTCCCTCTTTCTGGGAATGTCCTTGGTTTTCGAGCTTACAGCCTCTTGAGCTTAAATGATCTGAGAGACAAAGTTCCAAGGAAACAGAAGACGAGAAAGGGTCGTGGTATTGGTTCTGGGAAGGGGAAGACAGCAGGGAGAGGTCACAAGGGTCAAAAAGCGAGAGGTTCTGGGAAGCTAGGGTTTGAAGGGGGTCAAACCCCACTTCGTCGTAGGCTTCCTAAAAGAGGCTTTAAGAATCCTTTCAGCCTCACATTTCAGCCAGTTGGATTGGGAAAGATTGCTAAACTTATAAATGCTGGGAAAATTGATTCTTCTGAATTAATCACTATGAAAACACTCAAGGATACTGGTGCAATTGGAAAACAAATACAGGATGGGGTGAGGTTGATGGGACGTGGTGCTGAACAGATTAAGTGGCCAATTCACTTAGAGGTGTCAAGGGTCACTGTTAGGGCGAAGGCAGCGGTGGAAGCTGCCGGAGGGACTGTTAGAAGAGTGTATTACAATAAATTAGGCTTTCGGGCGCTGCTCACACCGGAGTGGTTCGAAAAGAAGGGTAGACTGTTACCACGAGCAGCTAGGCCACCCCCAAAGCAACAAGACAAAGTTGACAGCATTGGGCGCTTGCCTGCGCCCACTAAACCCATCCCTTTTTCGGTTGAAGATGGAGGAGAGGCAGCTTCCAGTTTGCCTGCCTAG

Protein sequence

MLRRRLCYFLSSSFASVRTKPPPAFAINQAVSRPFLEFQRNPSLDRSVGFPLSGNVLGFRAYSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKLGFEGGQTPLRRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIQDGVRLMGRGAEQIKWPIHLEVSRVTVRAKAAVEAAGGTVRRVYYNKLGFRALLTPEWFEKKGRLLPRAARPPPKQQDKVDSIGRLPAPTKPIPFSVEDGGEAASSLPA
Homology
[Close]
BLAST of Cp4.1LG01g17050 vs. Swiss-Prot
Match: RL15_GLUDA (50S ribosomal protein L15 OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) GN=rplO PE=3 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 8.0e-29
Identity = 79/152 (51.97%), Postives = 100/152 (65.79%), Query Frame = 1 

Query: 65  LSLNDLRDKV-PRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKL-GFEGGQTPLRRRL 124
           ++LN+LRD    R +K R GRGIGSGKGKT+G+G KGQKAR    L GFEGGQ PL RRL
Sbjct: 1   MNLNELRDNAGSRYRKKRLGRGIGSGKGKTSGKGVKGQKAREGVSLNGFEGGQLPLYRRL 60

Query: 125 PKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIQDGVRLMGR 184
           PKRGFKN F   + PV LG + K I  GKID+  ++T   L+  G +G     GVRL+ +
Sbjct: 61  PKRGFKNIFRKEYAPVNLGALDKAIADGKIDAGTVVTEDVLRTAGLVGSGKFAGVRLLAK 120

Query: 185 GAEQIKWPIHLEVSRVTVRAKAAVEAAGGTVR 215
           G  ++   + +EVS  +  A AAVE AGG+VR
Sbjct: 121 G--ELARAVTIEVSGASATAVAAVEKAGGSVR 150

[Close]
BLAST of Cp4.1LG01g17050 vs. Swiss-Prot
Match: RL15_XANP2 (50S ribosomal protein L15 OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=rplO PE=3 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 8.0e-29
Identity = 79/151 (52.32%), Postives = 101/151 (66.89%), Query Frame = 1 

Query: 65  LSLNDLRDKV-PRKQKTRKGRGIGSGKGKTAGRGHKGQKAR-GSGKLGFEGGQTPLRRRL 124
           ++L D+RD    RK++ R GRGIGSGKGKTAGRG KGQKAR G    GFEGGQ PL RRL
Sbjct: 1   MNLEDIRDNPGARKKRMRVGRGIGSGKGKTAGRGVKGQKARTGVAIKGFEGGQMPLHRRL 60

Query: 125 PKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIQDGVRLMGR 184
           PKRGF N F L +  V LGKI   + AGK+D+ + +T   L   G + ++ +DGVR++G 
Sbjct: 61  PKRGFHNIFRLDYNEVSLGKIQAAVEAGKLDAGQPVTEAALVAAGVL-RRAKDGVRVLGT 120

Query: 185 GAEQIKWPIHLEVSRVTVRAKAAVEAAGGTV 214
           G  ++   + LEV+  T  A AAVE AGG+V
Sbjct: 121 G--ELSAKVTLEVAYATKSAVAAVEKAGGSV 148

[Close]
BLAST of Cp4.1LG01g17050 vs. Swiss-Prot
Match: RL15_BRASO (50S ribosomal protein L15 OS=Bradyrhizobium sp. (strain ORS278) GN=rplO PE=3 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.4e-28
Identity = 76/152 (50.00%), Postives = 107/152 (70.39%), Query Frame = 1 

Query: 65  LSLNDLRDKV-PRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKL-GFEGGQTPLRRRL 124
           + L+D+ D    RK++ R GRGIGSGKGKT+GRG KGQ AR   ++ GFEGGQ P+ RRL
Sbjct: 1   MKLSDIADNAGARKKRMRVGRGIGSGKGKTSGRGGKGQTARSGVRIKGFEGGQMPMHRRL 60

Query: 125 PKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIQDGVRLMGR 184
           PKRGF N F+L F  + L +I + I+A K+D+  +I  ++L  +GA+ ++ +DGVRL+GR
Sbjct: 61  PKRGFNNIFALDFVEINLDRIQQAIDAKKLDAGSVINAESLVKSGAL-RRSKDGVRLLGR 120

Query: 185 GAEQIKWPIHLEVSRVTVRAKAAVEAAGGTVR 215
           G  ++K  I++EV   +  A AAVE AGGTV+
Sbjct: 121 G--ELKAKINIEVYGASKSAIAAVEKAGGTVK 149

[Close]
BLAST of Cp4.1LG01g17050 vs. Swiss-Prot
Match: RL15_BRASB (50S ribosomal protein L15 OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=rplO PE=3 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 4.0e-28
Identity = 75/152 (49.34%), Postives = 105/152 (69.08%), Query Frame = 1 

Query: 65  LSLNDLRDKV-PRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKL-GFEGGQTPLRRRL 124
           + L+D+ D    RK++ R GRGIGSGKGKT+GRG KGQ AR   ++ GFEGGQ P+ RRL
Sbjct: 1   MKLSDIADNAGARKKRMRVGRGIGSGKGKTSGRGGKGQTARSGVRIKGFEGGQMPMHRRL 60

Query: 125 PKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIQDGVRLMGR 184
           PKRGF N F+L F  + L +I + I+A K+D+  +I  + L  +GA+ ++ +DGVRL+GR
Sbjct: 61  PKRGFNNIFALDFVEINLDRIQQAIDAKKLDAGSVINAEALVKSGAL-RRAKDGVRLLGR 120

Query: 185 GAEQIKWPIHLEVSRVTVRAKAAVEAAGGTVR 215
           G  +I   +++EV   +  A AAVE AGGTV+
Sbjct: 121 G--EITAKVNIEVHGASKSAIAAVEKAGGTVK 149

[Close]
BLAST of Cp4.1LG01g17050 vs. Swiss-Prot
Match: RL15_RHORT (50S ribosomal protein L15 OS=Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG 4362 / NCIB 8255 / S1) GN=rplO PE=3 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 4.0e-28
Identity = 77/151 (50.99%), Postives = 102/151 (67.55%), Query Frame = 1 

Query: 65  LSLNDLRDKV-PRKQKTRKGRGIGSGKGKTAGRGHKGQKAR-GSGKLGFEGGQTPLRRRL 124
           + LN+LRD     K + R GRGIGSGKGKTAGRG KGQK+R G    GFEGGQ P+ RRL
Sbjct: 1   MKLNELRDNPGATKNRIRVGRGIGSGKGKTAGRGVKGQKSREGVSINGFEGGQMPIYRRL 60

Query: 125 PKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIQDGVRLMGR 184
           PKRGF NP   +F  V L +I K I+A K+D++ +IT K L + G + ++ QDGVRL+G+
Sbjct: 61  PKRGFNNPTRKSFAVVNLDRIQKAIDAKKLDATAVITEKALIEAGLV-RRSQDGVRLLGK 120

Query: 185 GAEQIKWPIHLEVSRVTVRAKAAVEAAGGTV 214
           G   +K  + +EV+  +  A+  VE AGGT+
Sbjct: 121 GELSVK--VAIEVAGASATAREGVEKAGGTL 148

[Close]
BLAST of Cp4.1LG01g17050 vs. TrEMBL
Match: A0A0A0KP79_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G532450 PE=3 SV=1)

HSP 1 Score: 496.1 bits (1276), Expect = 2.8e-137
Identity = 256/282 (90.78%), Postives = 264/282 (93.62%), Query Frame = 1 

Query: 1   MLRRRLCYFLSSSFASVRTKPPPAFAINQAVSRPFLEFQRNPSLDRSVGFPLSGNVLGFR 60
           MLRRRLC  LSSS ASV TKPPPA  INQA+SRPFLEFQ+NP LDR VG   SGN+ GFR
Sbjct: 1   MLRRRLCCLLSSSLASVHTKPPPAIVINQALSRPFLEFQQNPFLDRCVGSLPSGNIFGFR 60

Query: 61  AYSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKLGFEGGQTPLRR 120
           A+SLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQ+ARGSGKLGFEGGQTPLRR
Sbjct: 61  AFSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQRARGSGKLGFEGGQTPLRR 120

Query: 121 RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIQDGVRLM 180
           RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQI+DGVRLM
Sbjct: 121 RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGVRLM 180

Query: 181 GRGAEQIKWPIHLEVSRVTVRAKAAVEAAGGTVRRVYYNKLGFRALLTPEWFEKKGRLLP 240
           GRGAE IKWPIHLEVSRVTVRAK AVEAAGGTVRRVYYNKLG RALL PEWFEKKGRLLP
Sbjct: 181 GRGAEHIKWPIHLEVSRVTVRAKEAVEAAGGTVRRVYYNKLGLRALLKPEWFEKKGRLLP 240

Query: 241 RAARPPPKQQDKVDSIGRLPAPTKPIPFSV--EDGGEAASSL 281
           RAARPPPKQQDKVDSIGRLPAPTKPIPFSV  EDGG+AAS+L
Sbjct: 241 RAARPPPKQQDKVDSIGRLPAPTKPIPFSVEYEDGGKAASNL 282

[Close]
BLAST of Cp4.1LG01g17050 vs. TrEMBL
Match: M5VMS3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008724mg PE=3 SV=1)

HSP 1 Score: 417.2 bits (1071), Expect = 1.6e-113
Identity = 226/282 (80.14%), Postives = 242/282 (85.82%), Query Frame = 1 

Query: 1   MLRRRLCYFLSSSF--ASVRTKPPPAFAINQAVSRPFLEFQR-NPSLDRSVGFPLSGNVL 60
           MLRRR+   LS++   +S+RTKP  + +     S  FL+    NPS+  + GF       
Sbjct: 41  MLRRRVTSLLSTTIRSSSIRTKPTLSASPISFQSLHFLQCPNPNPSISNAKGFGFQPE-- 100

Query: 61  GFRAYSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKLGFEGGQTP 120
           G RAYSLLSLNDLR KVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKLGFEGGQTP
Sbjct: 101 GMRAYSLLSLNDLRGKVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKLGFEGGQTP 160

Query: 121 LRRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIQDGV 180
           LRRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQI+DGV
Sbjct: 161 LRRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIKDGV 220

Query: 181 RLMGRGAEQIKWPIHLEVSRVTVRAKAAVEAAGGTVRRVYYNKLGFRALLTPEWFEKKGR 240
           RLMGRGAEQI+WPIH EVSRVTVRAK AVEAAGG+VRRVYYNKLGFRALL PEWFEKKGR
Sbjct: 221 RLMGRGAEQIQWPIHFEVSRVTVRAKEAVEAAGGSVRRVYYNKLGFRALLKPEWFEKKGR 280

Query: 241 LLPRAARPPPKQQDKVDSIGRLPAPTKPIPFSVEDGGEAASS 280
           LLP+AARPPPKQ+DKVDSIGRLPAPTKPIPF  E+  E ASS
Sbjct: 281 LLPKAARPPPKQKDKVDSIGRLPAPTKPIPFFTEE--EVASS 318

[Close]
BLAST of Cp4.1LG01g17050 vs. TrEMBL
Match: W9R8K8_9ROSA (50S ribosomal protein L15 OS=Morus notabilis GN=L484_012191 PE=3 SV=1)

HSP 1 Score: 410.6 bits (1054), Expect = 1.5e-111
Identity = 224/283 (79.15%), Postives = 241/283 (85.16%), Query Frame = 1 

Query: 1   MLRRRLCYFLSSS-FASVRTKPPPAFAINQAVSRPFLEFQR-NPSLDRSVG-FPLSGNVL 60
           MLRRR+C  LSSS F ++  +P P   I Q++   FL+    N  L+   G F L     
Sbjct: 1   MLRRRICSILSSSIFNAITPRPLP---IQQSLR--FLQCPNPNSKLNNGGGEFGLWFGFG 60

Query: 61  GFRAYSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKLGFEGGQTP 120
           GFRAYSLLSLNDLR  VPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKLGFEGGQTP
Sbjct: 61  GFRAYSLLSLNDLRGNVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKLGFEGGQTP 120

Query: 121 LRRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIQDGV 180
           LRRR PKRGFKNPFSLTFQPVGLGKIAKLIN GKIDS ELITMKTLKDT AIGKQI+DGV
Sbjct: 121 LRRRFPKRGFKNPFSLTFQPVGLGKIAKLINEGKIDSHELITMKTLKDTEAIGKQIKDGV 180

Query: 181 RLMGRGAEQIKWPIHLEVSRVTVRAKAAVEAAGGTVRRVYYNKLGFRALLTPEWFEKKGR 240
           RLMGRGA+QIKWPIHLEVSRVTVRAKAAVEAAGG+VR+VYYNKLGFRALL PEWFEKKGR
Sbjct: 181 RLMGRGADQIKWPIHLEVSRVTVRAKAAVEAAGGSVRKVYYNKLGFRALLKPEWFEKKGR 240

Query: 241 LLPRAARPPPKQQDKVDSIGRLPAPTKPIPFSVEDGGEAASSL 281
           LLP+AARPPPKQ+DKVDSIGRLPAPTKPIPF +E+   A+ SL
Sbjct: 241 LLPKAARPPPKQRDKVDSIGRLPAPTKPIPFFIEEKEPASGSL 278

[Close]
BLAST of Cp4.1LG01g17050 vs. TrEMBL
Match: A0A061E357_THECC (Ribosomal protein L18e/L15 superfamily protein OS=Theobroma cacao GN=TCM_007684 PE=3 SV=1)

HSP 1 Score: 399.1 bits (1024), Expect = 4.6e-108
Identity = 217/281 (77.22%), Postives = 234/281 (83.27%), Query Frame = 1 

Query: 1   MLRRRLCYFLSSSFASVRTKPPPAFAINQAVSRPFLEFQRNPSLDRSVGFPLSGNVL--G 60
           M+RRRL   +S+S   ++TKP        +   P L F    SL  S     +G+    G
Sbjct: 1   MIRRRLSPIISASSHFLKTKPI-------SNPSPILHFHSFQSLQCSNPVIKNGSFWFQG 60

Query: 61  FRAYSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKLGFEGGQTPL 120
            RAYSLLSLNDL+DKVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARG+GKLGFEGGQTP+
Sbjct: 61  IRAYSLLSLNDLKDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGNGKLGFEGGQTPM 120

Query: 121 RRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIQDGVR 180
           RRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDS ELITMKTLKD GAIGKQI+DGVR
Sbjct: 121 RRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSHELITMKTLKDAGAIGKQIEDGVR 180

Query: 181 LMGRGAEQIKWPIHLEVSRVTVRAKAAVEAAGGTVRRVYYNKLGFRALLTPEWFEKKGRL 240
           LMGRGAEQIKWPIHLEVSRVTVRAK AVEAAGG+VRRV+YNKLG RALL PEWFEKKGRL
Sbjct: 181 LMGRGAEQIKWPIHLEVSRVTVRAKEAVEAAGGSVRRVHYNKLGLRALLKPEWFEKKGRL 240

Query: 241 LPRAARPPPKQQDKVDSIGRLPAPTKPIPFSVEDGGEAASS 280
           LP+ ARPPPK +DKVDSIGRLPAPTKPIPF  E+  E ASS
Sbjct: 241 LPKPARPPPKLKDKVDSIGRLPAPTKPIPFFTEE--EPASS 272

[Close]
BLAST of Cp4.1LG01g17050 vs. TrEMBL
Match: A0A0B2SX66_GLYSO (50S ribosomal protein L15 OS=Glycine soja GN=glysoja_019361 PE=3 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 1.9e-106
Identity = 212/281 (75.44%), Postives = 229/281 (81.49%), Query Frame = 1 

Query: 1   MLRRRLCYFLSSSFASVRTKPPPAFAINQAVSRPFLEFQRNPSLDRSVGFPLSGNVLGFR 60
           MLRRRL   LS+S         P        S PF + + +PS  R +      +  GFR
Sbjct: 1   MLRRRLSV-LSTSIIRRSNHSKPILRYPSIQSHPF-QLRHSPSAYRIISPNAFPDFQGFR 60

Query: 61  AYSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKLGFEGGQTPLRR 120
           AYSLLSLNDLRDKVPRKQ TRKGRGIGSGKGKTAGRGHKGQ+AR   KLGFEGGQTPLRR
Sbjct: 61  AYSLLSLNDLRDKVPRKQPTRKGRGIGSGKGKTAGRGHKGQRARKGIKLGFEGGQTPLRR 120

Query: 121 RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIQDGVRLM 180
           RLPKRGFKNPFSLTFQP+GLGKIAK INAGKIDSSELITMKTLKD G +GKQ++DGVRLM
Sbjct: 121 RLPKRGFKNPFSLTFQPIGLGKIAKFINAGKIDSSELITMKTLKDAGVLGKQMKDGVRLM 180

Query: 181 GRGAEQIKWPIHLEVSRVTVRAKAAVEAAGGTVRRVYYNKLGFRALLTPEWFEKKGRLLP 240
           GRG+EQIKWPIHLEVSRVTVRAK AVEAAGG+VRRVYYNKLG +AL+ PEWFEKKGRLLP
Sbjct: 181 GRGSEQIKWPIHLEVSRVTVRAKEAVEAAGGSVRRVYYNKLGLKALVKPEWFEKKGRLLP 240

Query: 241 RAARPPPKQQDKVDSIGRLPAPTKPIPFSVEDGGEAASSLP 282
           RAARPPPKQ+DKVDSIGRLPAPTKPIPF V    EA+  LP
Sbjct: 241 RAARPPPKQKDKVDSIGRLPAPTKPIPFLV----EASKDLP 275

[Close]
BLAST of Cp4.1LG01g17050 vs. TAIR10
Match: AT5G64670.1 (AT5G64670.1 Ribosomal protein L18e/L15 superfamily protein)

HSP 1 Score: 379.8 bits (974), Expect = 1.5e-105
Identity = 207/277 (74.73%), Postives = 221/277 (79.78%), Query Frame = 1 

Query: 1   MLRRRLCYFLSSSF--ASVRTKPPPAFAINQAVSRPFLEFQRNP-------SLDRSVGFP 60
           MLRRRL   +S+S   +S      P F I    S P L+ + +P       S  R++ F 
Sbjct: 1   MLRRRLLSIISTSLINSSFHQTAKPRFII----SSPLLQCRPSPISTQIPTSTSRALSFQ 60

Query: 61  LSGNVLGFRAYSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKLGF 120
                 G RAYSLLSLNDLRD VPRK KTRKGRGIGSGKGKTAGRGHKGQKARG+ K GF
Sbjct: 61  ------GIRAYSLLSLNDLRDNVPRKLKTRKGRGIGSGKGKTAGRGHKGQKARGTMKFGF 120

Query: 121 EGGQTPLRRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGK 180
           EGGQTPLRRRLPKRGFKN F L FQPVGLGKIAKLINAGKIDS ELITMKTLKD GAIGK
Sbjct: 121 EGGQTPLRRRLPKRGFKNKFKLHFQPVGLGKIAKLINAGKIDSHELITMKTLKDVGAIGK 180

Query: 181 QIQDGVRLMGRGAEQIKWPIHLEVSRVTVRAKAAVEAAGGTVRRVYYNKLGFRALLTPEW 240
           QI+DGVRLMGRGA+ IKWP+H EVSRVTVRAK  VEAAGG+VRRVYYNKLG RALL PEW
Sbjct: 181 QIEDGVRLMGRGADDIKWPLHFEVSRVTVRAKEVVEAAGGSVRRVYYNKLGLRALLKPEW 240

Query: 241 FEKKGRLLPRAARPPPKQQDKVDSIGRLPAPTKPIPF 269
           FEKKGRLLP+AARPPPKQQDKVDSIGRLPAP KPIPF
Sbjct: 241 FEKKGRLLPKAARPPPKQQDKVDSIGRLPAPKKPIPF 267

[Close]
BLAST of Cp4.1LG01g17050 vs. TAIR10
Match: AT3G25920.1 (AT3G25920.1 ribosomal protein L15)

HSP 1 Score: 59.7 bits (143), Expect = 3.4e-09
Identity = 59/184 (32.07%), Postives = 93/184 (50.54%), Query Frame = 1 

Query: 76  RKQKTRKGRGIGSGKGKTAGRGHKGQKAR-GSGKL-GFEGGQTPLRRRLPK-RGFKNPFS 135
           RK++ RKGRGI +G+G + G G +GQK+R G G + GFEGGQT L RRLPK RG      
Sbjct: 93  RKKQKRKGRGISAGQGASCGFGMRGQKSRSGPGIMRGFEGGQTALYRRLPKLRGIAGGMR 152

Query: 136 LTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAI---GKQIQDGVRLMGRGAEQIKW 195
            +  P  L    K I        + ++++TLK  G I   G++ +  ++++G G  ++  
Sbjct: 153 -SGLPKYLPVNIKDIETAGFQEGDEVSLETLKQKGLINPSGRERKLPLKILGTG--ELSM 212

Query: 196 PIHLEVSRVTVRAKAAVEAAGGTVRRVYYNKLGFRALL------TPEWFEKKGRLLPRAA 248
            +  +    + +AK  +EA+G T+  +   K   +  +        E+F KK      AA
Sbjct: 213 KLTFKARAFSTQAKEKLEASGCTLTVLPGRKKWVKPSVAKNQARADEYFAKKRAAAAEAA 272

[Close]
BLAST of Cp4.1LG01g17050 vs. NCBI nr
Match: gi|659121261|ref|XP_008460571.1| (PREDICTED: 54S ribosomal protein L10, mitochondrial [Cucumis melo])

HSP 1 Score: 502.7 bits (1293), Expect = 4.3e-139
Identity = 257/282 (91.13%), Postives = 266/282 (94.33%), Query Frame = 1 

Query: 1   MLRRRLCYFLSSSFASVRTKPPPAFAINQAVSRPFLEFQRNPSLDRSVGFPLSGNVLGFR 60
           MLRR+LCY LSSS ASVRTKPPPA  INQA+  PFLEFQ+NP LDR VG PLSGN+ GFR
Sbjct: 1   MLRRQLCYLLSSSLASVRTKPPPAIVINQALLHPFLEFQQNPCLDRCVGSPLSGNIFGFR 60

Query: 61  AYSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKLGFEGGQTPLRR 120
           A+SLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQ+ARGSGKLGFEGGQTPLRR
Sbjct: 61  AFSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQRARGSGKLGFEGGQTPLRR 120

Query: 121 RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIQDGVRLM 180
           RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQI+DGVRLM
Sbjct: 121 RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGVRLM 180

Query: 181 GRGAEQIKWPIHLEVSRVTVRAKAAVEAAGGTVRRVYYNKLGFRALLTPEWFEKKGRLLP 240
           GRGAE IKWPIHLEVSRVTVRAK AVEAAGGTVRRVYYNKLG RALL PEWFEKKGRLLP
Sbjct: 181 GRGAEHIKWPIHLEVSRVTVRAKEAVEAAGGTVRRVYYNKLGLRALLKPEWFEKKGRLLP 240

Query: 241 RAARPPPKQQDKVDSIGRLPAPTKPIPFSV--EDGGEAASSL 281
           RAARPPPKQQDKVDSIGRLPAPTKPIPFSV  EDGG+AAS+L
Sbjct: 241 RAARPPPKQQDKVDSIGRLPAPTKPIPFSVEYEDGGKAASNL 282

[Close]
BLAST of Cp4.1LG01g17050 vs. NCBI nr
Match: gi|449450123|ref|XP_004142813.1| (PREDICTED: 54S ribosomal protein L10, mitochondrial [Cucumis sativus])

HSP 1 Score: 496.1 bits (1276), Expect = 4.0e-137
Identity = 256/282 (90.78%), Postives = 264/282 (93.62%), Query Frame = 1 

Query: 1   MLRRRLCYFLSSSFASVRTKPPPAFAINQAVSRPFLEFQRNPSLDRSVGFPLSGNVLGFR 60
           MLRRRLC  LSSS ASV TKPPPA  INQA+SRPFLEFQ+NP LDR VG   SGN+ GFR
Sbjct: 1   MLRRRLCCLLSSSLASVHTKPPPAIVINQALSRPFLEFQQNPFLDRCVGSLPSGNIFGFR 60

Query: 61  AYSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKLGFEGGQTPLRR 120
           A+SLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQ+ARGSGKLGFEGGQTPLRR
Sbjct: 61  AFSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQRARGSGKLGFEGGQTPLRR 120

Query: 121 RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIQDGVRLM 180
           RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQI+DGVRLM
Sbjct: 121 RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGVRLM 180

Query: 181 GRGAEQIKWPIHLEVSRVTVRAKAAVEAAGGTVRRVYYNKLGFRALLTPEWFEKKGRLLP 240
           GRGAE IKWPIHLEVSRVTVRAK AVEAAGGTVRRVYYNKLG RALL PEWFEKKGRLLP
Sbjct: 181 GRGAEHIKWPIHLEVSRVTVRAKEAVEAAGGTVRRVYYNKLGLRALLKPEWFEKKGRLLP 240

Query: 241 RAARPPPKQQDKVDSIGRLPAPTKPIPFSV--EDGGEAASSL 281
           RAARPPPKQQDKVDSIGRLPAPTKPIPFSV  EDGG+AAS+L
Sbjct: 241 RAARPPPKQQDKVDSIGRLPAPTKPIPFSVEYEDGGKAASNL 282

[Close]
BLAST of Cp4.1LG01g17050 vs. NCBI nr
Match: gi|657993764|ref|XP_008389179.1| (PREDICTED: 54S ribosomal protein L10, mitochondrial-like [Malus domestica])

HSP 1 Score: 418.3 bits (1074), Expect = 1.1e-113
Identity = 224/278 (80.58%), Postives = 234/278 (84.17%), Query Frame = 1 

Query: 1   MLRRRLCYFLSSSF--ASVRTKPPPAFAINQAVSRPFLEF----QRNPSLDRSVGFPLSG 60
           MLRRRL   LS++   +S+RTKPP        +    L F      NPS     GF   G
Sbjct: 1   MLRRRLPSLLSTTIFTSSIRTKPPFTLPTPSPIPSQSLHFLPCLNPNPSFSNGKGFGFQG 60

Query: 61  NVLGFRAYSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKLGFEGG 120
                RAYSLLSLNDLR KVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKLGFEGG
Sbjct: 61  ----VRAYSLLSLNDLRGKVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKLGFEGG 120

Query: 121 QTPLRRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIQ 180
           QTPLRRRLPKRGF NPFSLTFQPVGLGKIA LINAGKIDSSELITMKTLKDTGAIGKQI+
Sbjct: 121 QTPLRRRLPKRGFNNPFSLTFQPVGLGKIATLINAGKIDSSELITMKTLKDTGAIGKQIK 180

Query: 181 DGVRLMGRGAEQIKWPIHLEVSRVTVRAKAAVEAAGGTVRRVYYNKLGFRALLTPEWFEK 240
           DGVRLMGRGAEQI+WPIHLEVSRVTVRAK AVEAAGG+VRRVYYNKLGFRALL PEWFEK
Sbjct: 181 DGVRLMGRGAEQIQWPIHLEVSRVTVRAKEAVEAAGGSVRRVYYNKLGFRALLKPEWFEK 240

Query: 241 KGRLLPRAARPPPKQQDKVDSIGRLPAPTKPIPFSVED 273
           KGRLLP+AARPPPKQ+DKVDSIGRLPAPTKPIPFS ED
Sbjct: 241 KGRLLPKAARPPPKQKDKVDSIGRLPAPTKPIPFSTED 274

[Close]
BLAST of Cp4.1LG01g17050 vs. NCBI nr
Match: gi|595797630|ref|XP_007201295.1| (hypothetical protein PRUPE_ppa008724mg [Prunus persica])

HSP 1 Score: 417.2 bits (1071), Expect = 2.4e-113
Identity = 226/282 (80.14%), Postives = 242/282 (85.82%), Query Frame = 1 

Query: 1   MLRRRLCYFLSSSF--ASVRTKPPPAFAINQAVSRPFLEFQR-NPSLDRSVGFPLSGNVL 60
           MLRRR+   LS++   +S+RTKP  + +     S  FL+    NPS+  + GF       
Sbjct: 41  MLRRRVTSLLSTTIRSSSIRTKPTLSASPISFQSLHFLQCPNPNPSISNAKGFGFQPE-- 100

Query: 61  GFRAYSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKLGFEGGQTP 120
           G RAYSLLSLNDLR KVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKLGFEGGQTP
Sbjct: 101 GMRAYSLLSLNDLRGKVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKLGFEGGQTP 160

Query: 121 LRRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIQDGV 180
           LRRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQI+DGV
Sbjct: 161 LRRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIKDGV 220

Query: 181 RLMGRGAEQIKWPIHLEVSRVTVRAKAAVEAAGGTVRRVYYNKLGFRALLTPEWFEKKGR 240
           RLMGRGAEQI+WPIH EVSRVTVRAK AVEAAGG+VRRVYYNKLGFRALL PEWFEKKGR
Sbjct: 221 RLMGRGAEQIQWPIHFEVSRVTVRAKEAVEAAGGSVRRVYYNKLGFRALLKPEWFEKKGR 280

Query: 241 LLPRAARPPPKQQDKVDSIGRLPAPTKPIPFSVEDGGEAASS 280
           LLP+AARPPPKQ+DKVDSIGRLPAPTKPIPF  E+  E ASS
Sbjct: 281 LLPKAARPPPKQKDKVDSIGRLPAPTKPIPFFTEE--EVASS 318

[Close]
BLAST of Cp4.1LG01g17050 vs. NCBI nr
Match: gi|694421823|ref|XP_009338744.1| (PREDICTED: 54S ribosomal protein L10, mitochondrial [Pyrus x bretschneideri])

HSP 1 Score: 416.8 bits (1070), Expect = 3.1e-113
Identity = 222/278 (79.86%), Postives = 235/278 (84.53%), Query Frame = 1 

Query: 1   MLRRRLCYFLSSSF--ASVRTKPPPAFAINQAVSRPFLEF----QRNPSLDRSVGFPLSG 60
           MLRRRL   LS++   +S+RTKPP     +  +    L F      NPS +   GF   G
Sbjct: 1   MLRRRLPSLLSTTIFTSSIRTKPPLTLPTHSPIPSQSLHFLPCLNPNPSFNNDKGFGFQG 60

Query: 61  NVLGFRAYSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKLGFEGG 120
                RAYSLLSLNDLR KVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKLGFEGG
Sbjct: 61  ----VRAYSLLSLNDLRGKVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKLGFEGG 120

Query: 121 QTPLRRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIQ 180
           QTPLRRRLPKRGF NPFSLTFQPVGLGKIA LINAGKIDSSELITMKTLKDTGAIGKQI+
Sbjct: 121 QTPLRRRLPKRGFNNPFSLTFQPVGLGKIATLINAGKIDSSELITMKTLKDTGAIGKQIK 180

Query: 181 DGVRLMGRGAEQIKWPIHLEVSRVTVRAKAAVEAAGGTVRRVYYNKLGFRALLTPEWFEK 240
           DGVRLMGRGAEQI+WPIHLEVSRVTVRA+ AVEAAGG+VRRVYYNKLGFRALL PEWFEK
Sbjct: 181 DGVRLMGRGAEQIQWPIHLEVSRVTVRAREAVEAAGGSVRRVYYNKLGFRALLKPEWFEK 240

Query: 241 KGRLLPRAARPPPKQQDKVDSIGRLPAPTKPIPFSVED 273
           KGRLLP+AARPPPKQ+DKVDSIGRLPAPTKPIPF  ED
Sbjct: 241 KGRLLPKAARPPPKQKDKVDSIGRLPAPTKPIPFLTED 274

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g17050 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RL15_GLUDA8.0e-2951.9750S ribosomal protein L15 OS=Gluconacetobacter diazotrophicus (strain ATCC 49037... [more]
RL15_XANP28.0e-2952.3250S ribosomal protein L15 OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / ... [more]
RL15_BRASO1.4e-2850.0050S ribosomal protein L15 OS=Bradyrhizobium sp. (strain ORS278) GN=rplO PE=3 SV=... [more]
RL15_BRASB4.0e-2849.3450S ribosomal protein L15 OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) G... [more]
RL15_RHORT4.0e-2850.9950S ribosomal protein L15 OS=Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.... [more]
BLAST of Cp4.1LG01g17050 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KP79_CUCSA2.8e-13790.78Uncharacterized protein OS=Cucumis sativus GN=Csa_5G532450 PE=3 SV=1[more]
M5VMS3_PRUPE1.6e-11380.14Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008724mg PE=3 SV=1[more]
W9R8K8_9ROSA1.5e-11179.1550S ribosomal protein L15 OS=Morus notabilis GN=L484_012191 PE=3 SV=1[more]
A0A061E357_THECC4.6e-10877.22Ribosomal protein L18e/L15 superfamily protein OS=Theobroma cacao GN=TCM_007684 ... [more]
A0A0B2SX66_GLYSO1.9e-10675.4450S ribosomal protein L15 OS=Glycine soja GN=glysoja_019361 PE=3 SV=1[more]
BLAST of Cp4.1LG01g17050 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G64670.11.5e-10574.73 Ribosomal protein L18e/L15 superfamily protein[more]
AT3G25920.13.4e-0932.07 ribosomal protein L15[more]
BLAST of Cp4.1LG01g17050 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659121261|ref|XP_008460571.1|4.3e-13991.13PREDICTED: 54S ribosomal protein L10, mitochondrial [Cucumis melo][more]
gi|449450123|ref|XP_004142813.1|4.0e-13790.78PREDICTED: 54S ribosomal protein L10, mitochondrial [Cucumis sativus][more]
gi|657993764|ref|XP_008389179.1|1.1e-11380.58PREDICTED: 54S ribosomal protein L10, mitochondrial-like [Malus domestica][more]
gi|595797630|ref|XP_007201295.1|2.4e-11380.14hypothetical protein PRUPE_ppa008724mg [Prunus persica][more]
gi|694421823|ref|XP_009338744.1|3.1e-11379.86PREDICTED: 54S ribosomal protein L10, mitochondrial [Pyrus x bretschneideri][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0015934large ribosomal subunit
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: INTERPRO
TermDefinition
IPR021131Ribosomal_L18e/L15P
IPR005749Ribosomal_L15_bac-type
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
cellular_component GO:0015934 large ribosomal subunit
molecular_function GO:0003735 structural constituent of ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g17050.1Cp4.1LG01g17050.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005749Ribosomal protein L15, bacterial-typePANTHERPTHR1293450S RIBOSOMAL PROTEIN L15coord: 59..271
score: 1.9E
IPR005749Ribosomal protein L15, bacterial-typeTIGRFAMsTIGR01071TIGR01071coord: 67..213
score: 1.3
IPR021131Ribosomal protein L18e/L15PPFAMPF00828Ribosomal_L27Acoord: 90..213
score: 4.9
IPR021131Ribosomal protein L18e/L15PunknownSSF52080Ribosomal proteins L15p and L18ecoord: 75..213
score: 6.8
NoneNo IPR availableGENE3DG3DSA:3.100.10.10coord: 95..214
score: 2.3
NoneNo IPR availablePANTHERPTHR12934:SF1239S RIBOSOMAL PROTEIN L15, MITOCHONDRIALcoord: 59..271
score: 1.9E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g17050Cucsa.011740Cucumber (Gy14) v1cgycpeB0524
Cp4.1LG01g17050CmaCh04G018900Cucurbita maxima (Rimu)cmacpeB725
Cp4.1LG01g17050CmoCh04G019940Cucurbita moschata (Rifu)cmocpeB677
Cp4.1LG01g17050Cla001875Watermelon (97103) v1cpewmB469
Cp4.1LG01g17050Csa5G532450Cucumber (Chinese Long) v2cpecuB453
Cp4.1LG01g17050MELO3C022914Melon (DHL92) v3.5.1cpemeB371
Cp4.1LG01g17050CSPI05G18790Wild cucumber (PI 183967)cpecpiB458
Cp4.1LG01g17050Lsi11G001070Bottle gourd (USVL1VR-Ls)cpelsiB321
Cp4.1LG01g17050MELO3C022914.2Melon (DHL92) v3.6.1cpemedB429
Cp4.1LG01g17050CsaV3_5G027610Cucumber (Chinese Long) v3cpecucB0560
Cp4.1LG01g17050Bhi07G000062Wax gourdcpewgoB0559
Cp4.1LG01g17050CsGy5G018320Cucumber (Gy14) v2cgybcpeB664
Cp4.1LG01g17050Carg26169Silver-seed gourdcarcpeB0397
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g17050Cucumber (Gy14) v1cgycpeB0502
Cp4.1LG01g17050Cucurbita maxima (Rimu)cmacpeB720
Cp4.1LG01g17050Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g17050Cucurbita moschata (Rifu)cmocpeB680
Cp4.1LG01g17050Cucurbita moschata (Rifu)cmocpeB682
Cp4.1LG01g17050Cucurbita moschata (Rifu)cmocpeB686
Cp4.1LG01g17050Wild cucumber (PI 183967)cpecpiB453
Cp4.1LG01g17050Cucumber (Chinese Long) v2cpecuB448
Cp4.1LG01g17050Cucumber (Chinese Long) v2cpecuB449
Cp4.1LG01g17050Watermelon (Charleston Gray)cpewcgB362
Cp4.1LG01g17050Watermelon (Charleston Gray)cpewcgB365
Cp4.1LG01g17050Watermelon (97103) v1cpewmB455
Cp4.1LG01g17050Cucumber (Gy14) v2cgybcpeB663
Cp4.1LG01g17050Cucumber (Chinese Long) v3cpecucB0557
Cp4.1LG01g17050Wax gourdcpewgoB0540