Cp4.1LG01g17050 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGTCGTTCAAAGGAAAAGTAAGGAAACCTGATTCCCCAATTTCAGTCCCCCTCCCTACTCAGTCGCTTTCTTCTTCTTTGGTGAGCCTTCCACCGGCGGCGTTTGTCGAGCAGCACAACCCACGAGCTCTAGTTCTACGCGACGGAGGTAACCTGCGGCGACAGCACCTACACTCCGACAAGCAGATCCTCACAACCTCGACGGCGTCTTGTTGTGCGCGACGACACCCACGCAGCGGCAGCAACCTAAACGTCCAGACTCCTATTGCTCTGCAGCGACGCATCTTGCCGACGATTCGTAGAGTTCCATTTGCTCTACGGTGCGAGCAGATTCCAGGCACGAATAGAAACGCCTCTAAACTCGCGGGTTCGACGTATTTATTAGCGAGCTAATTTCAGCAGCAACCTACTCCTCAATTGATTTTGATTCAGTTTTCTCGTATCCCGTAGAAATCAGATTTGCGATTTTGAACTTGATCACGTTCCAGCAAAGATTTCAGTCCTTATTGGTAACGTTTCATGGGTACATTTGCTTTTTCTTTCTTACAGATTGAATTTTAAGTGTTTGAATTGGATTCTATTGCTTGATGCTCTTCTGTTTTAGGTTCTTACTAGTTTCGGACTCCTTCGAACACATTTCAGCAAAGACCCAAGCTCTTTTGGTAAGATTTGGGTGGTAACGGTACTTTTAATCCATTTCAAACTCGATTAAAATGGTTTAGATTAATCTCTAACCCTTGGGAACTCTTGGGCGTAGATTTAGACTTCATTAGGAGAGTTCGAACTTAGGTTTAAGGTCATATTTGGTAAGAGCGCCCCTCTAGAATACAATTTCAGTTTGAATAAGGATTTTGAACTAATGCTAGCGTCCAAGTATTCCTTTTTGTTTAGGGCCCCTTTGAACTAATCTAGGAGCACTATAGGCATGTATAATTTTACGTTGTTTGATAGTATGTTGTTCTCTATATTTAGTATTTATGATGTAAATATTTGATGCTCTTAAACCTCTATGTGCTTTGGATGGTTAATCATGCTCGAATGCTGTGATGACTAACATGCTGGGAAGCCGTTGATGATCCATTGTTTATGCATGTGTTATAGTTGAGAATGTCTAATTCTGCATATGATTTCAGCTGAGGGCGTGTTGTTGTTCATGTGAGAAAAAGGTTAGAGTACTATGTGCATTTATAAAGGAAAGTAGGGTGCATATCGGTGTGCCTCGGGTGAAAATGGTTGAGGGGTGATATTTAATCATTGGATTAAGAGGAGCATCGAGACCTTGGGTAAAAATGGTCAAGGGTCTATGCGAGTCTACAGAGACAAGTATTGGGGCTCATGAGAAGAAGGCACAATATGTTGCCAAGTTGTTGAGGCCTTGGATAAAAATGGGCGACGGTCAATGCATACTTCAAGGCCTCAGGTAGGTCAAGGGTCGATGCATAGTTTGAGGCCTTGGGTAAGTCGATGTCGAACACTGTGTGCAGTAGAAAACATTGAGGCCCTAGATAAAAAGGTAAGGGGTCGACATATCTCGAAGGAATCCGTCTCTAAGAATTTTGGTGAAGGCTAAATATGAGTGTTGAGTGAGCTTGTCGAGCTTGAGTAGACATTGAGTGTGCATTACATGATGTGCTGATTCATGCATTTAGTATTTTGTAATTGTTATTTATTTTACACGTATGATGAGCATGTGCAATTTTTGTGAATAGCATGATGTGTGCCTTGTATATTATTTGGTGGCTCCTCAAGCATGAGTTGCTTACTTAGCATGTGTTATGTACAGACCCACCAACATATTTTGTAGGTGGTGATTATTTTTACTCAGCATTGTGTTATGTACTAATCCACCAACGATTAGTTTGTGTTTGATTATTTATCTTATACCTCTATTCAACCCAACAAATGAATAAAAAAAAGACAAAGATTAACTTTATTAGATTTTTTCGATGCATCCCCAAGGTTTTGATATTGTGTTTGATGTTTTCTTTATCTTCGCTCTGAAATACCATACTGTATCTATGATTGAGGGTTGTAGGAACTCTATTCTTATTACCTCTACTTTGACTACATTATTTCTGCTTTTTTTTTTACTTTTTTTAACTTTTAATTTTCTACATAGACTCCTCACGTCTTATACTGTAATAGTTACATCATGTTTTGAATTATATTGGTGATTTTGTTAAGTGCTATTCTGTTCAGTAGGATATAAGGAAGAACCTATTTTAAAATACATATACATGGTTGAGCTAGATATTTTCCACTTGATATTCTGTATATTACAAAACTTAATCTATTCCATTCATAATGTAGCAATCATTTAGTCTCTATCCTGCATTGGCTTGAGGAACAGAGACAACTAGTGAAATTTATTATTCGATCTGTAAAAAGGAGAAGGAAATGCTACGAAGACGGCTGTGTTACTTTCTATCTAGCTCATTTGCTTCAGTTCGTACTAAACCCCCACCTGCTTTTGCAATAAACCAAGCAGTATCACGTCCATTCCTAGAGTTCCAGCGAAACCCTAGCCTTGATCGGAGTGTAGGTTTCCCTCTTTCTGGGAATGTCCTTGGTTTTCGAGCTTACAGCCTCTTGAGCTTAAATGATCTGAGAGACAAAGTTCCAAGGAAACAGAAGACGAGAAAGGGTCGTGGTATTGGTTCTGGGAAGGGGAAGACAGCAGGGAGAGGTCACAAGGGTCAAAAAGCGAGAGGTTCTGGGAAGCTAGGGTTTGAAGGGGGTCAAACCCCACTTCGTCGTAGGCTTCCTAAAAGAGGCTTTAAGAATCCTTTCAGCCTCACATTTCAGGTATTTGATTTGTGTTTTCATGTTATTGTTTTGTTGCTTGTGATCAGTATTTTAAAATGCCCACTAAGGTGTGCGCCTTGGTGTGCTTAAACCCAAGGCACGACCTATGTGCCTTGCTTCAAAGAAGTGAGTCTCCCTCATTGAAGCCCACTTGAGGCATGCGTCTTAGCACTTGTGTTGTGTGCCTTAACGCCTCAAACTCGATTTCTTTTTCTAATTTTCAAGGAAGAAATATATTAATATTCTTACATTCTCGAATAAAAGCTCTATTTTCTTGAACTTTGTATCATCTTATTATTCATCATACTATTTTTCTTCCTATCTTAAAATTTTATTTACATTTTTATTGTACGCCATTAAAAAAAGAAAGTCCATGCTTAAGGTCCCAAAAGACTATTGTGCTCCGGTGCACCTCGAGCTTTAGAAAACACTGCTTGTGATTATTATTTACTTCTCAATTACTTTGTTTTTTTTGGAGGAGTAAGATTAATTTAAAGATGCTCGTTTAACTTTATGCAATAGTTTGATGCCAAATTGTGTAATGAATTCTATTTTCATCTTGAAGAAAACAAGTCTTTAATATCGATATCTACTAGTAATTTTATTTCAGTAAATAGCATGTGATACGAAATTCATGTTGCATGATCTCTAAAAGAGTTGCCTTCTGCACTTTGCATTACTTACTGTATAACACAGTTGGTATCTTCTGATGTGAAGTCCCTAACAATATAATTTTGTCTAGTGCAAAAGACAATTCTTTTTGGGCATGATATTTTTTCCTAGAGTGTTATGATATTTCTTGATTCTTTTGTTTAATGACAGCCAGTTGGATTGGGAAAGATTGCTAAACTTATAAATGCTGGGAAAATTGATTCTTCTGAATTAATCACTATGAAAACACTCAAGGTATCATGACTTGTATCTTGACTAGTCTTATCAAAAGCCTGAAATACGTGTTTTCTTTTTAATATTGTATTTGATTTATTATCCTTACCATTGTGGAATAGGATACTGGTGCAATTGGAAAACAAATACAGGATGGGGTGAGGTTGATGGGACGTGGTGCTGAACAGATTAAGTGGCCAATTCACTTAGAGGTAAATCTTCAACAAAAAAATGTTCTTTTTTTCCTTTCTGTTCTGACGTTGACTTCTAAACCTATATGCTCCTTAGTTAAGCTCATATTTTGTATCAATTACTTATAAATCTGAGCTATCGTCATGCTGCCAATTTGAAGCTAGTGCACTCTTCTCGACGAAGAGATTCTAGTGTTGTCGATGTTCTTCCAGGGTTGCATCTAGCTGTCTTTCTAGTCTAGGTTGGGATCCAATTGCTTTCAGATTGCCCGTATTTGCTATAACAAAAGGAATATTTCTTCCGTTTGTGTAGCTTTGTAGACATTGTTATTTGCTTGTGATTGATGTGCTTAGGCAAGTTTTGTCATAGTTAGAGCTTTCAAGTCTCTCATCTTTAACCATTTGGATTGATCTCAATAGCCTCCGATCTAGCTTCCTCCTGTGCTCGGAACTAATCTTAAATACGTGATGTTTTCAGGTGTCAAGGGTCACTGTTAGGGCGAAGGCAGCGGTGGAAGCTGCCGGAGGGACTGTTAGAAGAGTGTATTACAATAAATTAGGCTTTCGGGCGCTGCTCACACCGGAGTGGTTCGAAAAGAAGGGTAGACTGTTACCACGAGCAGCTAGGCCACCCCCAAAGCAACAAGACAAAGTTGACAGCATTGGGCGCTTGCCTGCGCCCACTAAACCCATCCCTTTTTCGGTTGAAGATGGAGGAGAGGCAGCTTCCAGTTTGCCTGCCTAGGCAATCATGGTCATTCCCATGAAGGATTTTAACTTTCGATTGTCCCTTTGAAATGCATTTTGTAAGCCGGTAACCATTTTGTTTCTACATTTTTTTTAAAGGTTCAATGATGGACGGCCGCTCTTCACAGACGTTTTCAGGATTCCGGGTGGTAATAGAAATCACCTCATCTTATTAACTATCAAGTTCAATAAAGATAATATGTGCTTAACTATTAGAT TGTCGTTCAAAGGAAAAGTAAGGAAACCTGATTCCCCAATTTCAGTCCCCCTCCCTACTCAGTCGCTTTCTTCTTCTTTGGTGAGCCTTCCACCGGCGGCGTTTGTCGAGCAGCACAACCCACGAGCTCTAGTTCTACGCGACGGAGGTAACCTGCGGCGACAGCACCTACACTCCGACAAGCAGATCCTCACAACCTCGACGGCGTCTTGTTGTGCGCGACGACACCCACGCAGCGGCAGCAACCTAAACGTCCAGACTCCTATTGCTCTGCAGCGACGCATCTTGCCGACGATTCGTAGAGTTCCATTTGCTCTACGGTGCGAGCAGATTCCAGGCACGAATAGAAACGCCTCTAAACTCGCGGGTTCGACGTATTTATTAGCGAGCTAATTTCAGCAGCAACCTACTCCTCAATTGATTTTGATTCAGTTTTCTCGTATCCCGTAGAAATCAGATTTGCGATTTTGAACTTGATCACGTTCCAGCAAAGATTTCAGTCCTTATTGGTTCTTACTAGTTTCGGACTCCTTCGAACACATTTCAGCAAAGACCCAAGCTCTTTTGCAATCATTTAGTCTCTATCCTGCATTGGCTTGAGGAACAGAGACAACTAGTGAAATTTATTATTCGATCTGTAAAAAGGAGAAGGAAATGCTACGAAGACGGCTGTGTTACTTTCTATCTAGCTCATTTGCTTCAGTTCGTACTAAACCCCCACCTGCTTTTGCAATAAACCAAGCAGTATCACGTCCATTCCTAGAGTTCCAGCGAAACCCTAGCCTTGATCGGAGTGTAGGTTTCCCTCTTTCTGGGAATGTCCTTGGTTTTCGAGCTTACAGCCTCTTGAGCTTAAATGATCTGAGAGACAAAGTTCCAAGGAAACAGAAGACGAGAAAGGGTCGTGGTATTGGTTCTGGGAAGGGGAAGACAGCAGGGAGAGGTCACAAGGGTCAAAAAGCGAGAGGTTCTGGGAAGCTAGGGTTTGAAGGGGGTCAAACCCCACTTCGTCGTAGGCTTCCTAAAAGAGGCTTTAAGAATCCTTTCAGCCTCACATTTCAGCCAGTTGGATTGGGAAAGATTGCTAAACTTATAAATGCTGGGAAAATTGATTCTTCTGAATTAATCACTATGAAAACACTCAAGGATACTGGTGCAATTGGAAAACAAATACAGGATGGGGTGAGGTTGATGGGACGTGGTGCTGAACAGATTAAGTGGCCAATTCACTTAGAGGTGTCAAGGGTCACTGTTAGGGCGAAGGCAGCGGTGGAAGCTGCCGGAGGGACTGTTAGAAGAGTGTATTACAATAAATTAGGCTTTCGGGCGCTGCTCACACCGGAGTGGTTCGAAAAGAAGGGTAGACTGTTACCACGAGCAGCTAGGCCACCCCCAAAGCAACAAGACAAAGTTGACAGCATTGGGCGCTTGCCTGCGCCCACTAAACCCATCCCTTTTTCGGTTGAAGATGGAGGAGAGGCAGCTTCCAGTTTGCCTGCCTAGGCAATCATGGTCATTCCCATGAAGGATTTTAACTTTCGATTGTCCCTTTGAAATGCATTTTGTAAGCCGGTAACCATTTTGTTTCTACATTTTTTTTAAAGGTTCAATGATGGACGGCCGCTCTTCACAGACGTTTTCAGGATTCCGGGTGGTAATAGAAATCACCTCATCTTATTAACTATCAAGTTCAATAAAGATAATATGTGCTTAACTATTAGAT ATGCTACGAAGACGGCTGTGTTACTTTCTATCTAGCTCATTTGCTTCAGTTCGTACTAAACCCCCACCTGCTTTTGCAATAAACCAAGCAGTATCACGTCCATTCCTAGAGTTCCAGCGAAACCCTAGCCTTGATCGGAGTGTAGGTTTCCCTCTTTCTGGGAATGTCCTTGGTTTTCGAGCTTACAGCCTCTTGAGCTTAAATGATCTGAGAGACAAAGTTCCAAGGAAACAGAAGACGAGAAAGGGTCGTGGTATTGGTTCTGGGAAGGGGAAGACAGCAGGGAGAGGTCACAAGGGTCAAAAAGCGAGAGGTTCTGGGAAGCTAGGGTTTGAAGGGGGTCAAACCCCACTTCGTCGTAGGCTTCCTAAAAGAGGCTTTAAGAATCCTTTCAGCCTCACATTTCAGCCAGTTGGATTGGGAAAGATTGCTAAACTTATAAATGCTGGGAAAATTGATTCTTCTGAATTAATCACTATGAAAACACTCAAGGATACTGGTGCAATTGGAAAACAAATACAGGATGGGGTGAGGTTGATGGGACGTGGTGCTGAACAGATTAAGTGGCCAATTCACTTAGAGGTGTCAAGGGTCACTGTTAGGGCGAAGGCAGCGGTGGAAGCTGCCGGAGGGACTGTTAGAAGAGTGTATTACAATAAATTAGGCTTTCGGGCGCTGCTCACACCGGAGTGGTTCGAAAAGAAGGGTAGACTGTTACCACGAGCAGCTAGGCCACCCCCAAAGCAACAAGACAAAGTTGACAGCATTGGGCGCTTGCCTGCGCCCACTAAACCCATCCCTTTTTCGGTTGAAGATGGAGGAGAGGCAGCTTCCAGTTTGCCTGCCTAG MLRRRLCYFLSSSFASVRTKPPPAFAINQAVSRPFLEFQRNPSLDRSVGFPLSGNVLGFRAYSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKLGFEGGQTPLRRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIQDGVRLMGRGAEQIKWPIHLEVSRVTVRAKAAVEAAGGTVRRVYYNKLGFRALLTPEWFEKKGRLLPRAARPPPKQQDKVDSIGRLPAPTKPIPFSVEDGGEAASSLPA
BLAST of Cp4.1LG01g17050 vs. Swiss-Prot
Match: RL15_GLUDA (50S ribosomal protein L15 OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) GN=rplO PE=3 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 8.0e-29 Identity = 79/152 (51.97%), Postives = 100/152 (65.79%), Query Frame = 1
BLAST of Cp4.1LG01g17050 vs. Swiss-Prot
Match: RL15_XANP2 (50S ribosomal protein L15 OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=rplO PE=3 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 8.0e-29 Identity = 79/151 (52.32%), Postives = 101/151 (66.89%), Query Frame = 1
BLAST of Cp4.1LG01g17050 vs. Swiss-Prot
Match: RL15_BRASO (50S ribosomal protein L15 OS=Bradyrhizobium sp. (strain ORS278) GN=rplO PE=3 SV=1) HSP 1 Score: 128.3 bits (321), Expect = 1.4e-28 Identity = 76/152 (50.00%), Postives = 107/152 (70.39%), Query Frame = 1
BLAST of Cp4.1LG01g17050 vs. Swiss-Prot
Match: RL15_BRASB (50S ribosomal protein L15 OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=rplO PE=3 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 4.0e-28 Identity = 75/152 (49.34%), Postives = 105/152 (69.08%), Query Frame = 1
BLAST of Cp4.1LG01g17050 vs. Swiss-Prot
Match: RL15_RHORT (50S ribosomal protein L15 OS=Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG 4362 / NCIB 8255 / S1) GN=rplO PE=3 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 4.0e-28 Identity = 77/151 (50.99%), Postives = 102/151 (67.55%), Query Frame = 1
BLAST of Cp4.1LG01g17050 vs. TrEMBL
Match: A0A0A0KP79_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G532450 PE=3 SV=1) HSP 1 Score: 496.1 bits (1276), Expect = 2.8e-137 Identity = 256/282 (90.78%), Postives = 264/282 (93.62%), Query Frame = 1
BLAST of Cp4.1LG01g17050 vs. TrEMBL
Match: M5VMS3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008724mg PE=3 SV=1) HSP 1 Score: 417.2 bits (1071), Expect = 1.6e-113 Identity = 226/282 (80.14%), Postives = 242/282 (85.82%), Query Frame = 1
BLAST of Cp4.1LG01g17050 vs. TrEMBL
Match: W9R8K8_9ROSA (50S ribosomal protein L15 OS=Morus notabilis GN=L484_012191 PE=3 SV=1) HSP 1 Score: 410.6 bits (1054), Expect = 1.5e-111 Identity = 224/283 (79.15%), Postives = 241/283 (85.16%), Query Frame = 1
BLAST of Cp4.1LG01g17050 vs. TrEMBL
Match: A0A061E357_THECC (Ribosomal protein L18e/L15 superfamily protein OS=Theobroma cacao GN=TCM_007684 PE=3 SV=1) HSP 1 Score: 399.1 bits (1024), Expect = 4.6e-108 Identity = 217/281 (77.22%), Postives = 234/281 (83.27%), Query Frame = 1
BLAST of Cp4.1LG01g17050 vs. TrEMBL
Match: A0A0B2SX66_GLYSO (50S ribosomal protein L15 OS=Glycine soja GN=glysoja_019361 PE=3 SV=1) HSP 1 Score: 393.7 bits (1010), Expect = 1.9e-106 Identity = 212/281 (75.44%), Postives = 229/281 (81.49%), Query Frame = 1
BLAST of Cp4.1LG01g17050 vs. TAIR10
Match: AT5G64670.1 (AT5G64670.1 Ribosomal protein L18e/L15 superfamily protein) HSP 1 Score: 379.8 bits (974), Expect = 1.5e-105 Identity = 207/277 (74.73%), Postives = 221/277 (79.78%), Query Frame = 1
BLAST of Cp4.1LG01g17050 vs. TAIR10
Match: AT3G25920.1 (AT3G25920.1 ribosomal protein L15) HSP 1 Score: 59.7 bits (143), Expect = 3.4e-09 Identity = 59/184 (32.07%), Postives = 93/184 (50.54%), Query Frame = 1
BLAST of Cp4.1LG01g17050 vs. NCBI nr
Match: gi|659121261|ref|XP_008460571.1| (PREDICTED: 54S ribosomal protein L10, mitochondrial [Cucumis melo]) HSP 1 Score: 502.7 bits (1293), Expect = 4.3e-139 Identity = 257/282 (91.13%), Postives = 266/282 (94.33%), Query Frame = 1
BLAST of Cp4.1LG01g17050 vs. NCBI nr
Match: gi|449450123|ref|XP_004142813.1| (PREDICTED: 54S ribosomal protein L10, mitochondrial [Cucumis sativus]) HSP 1 Score: 496.1 bits (1276), Expect = 4.0e-137 Identity = 256/282 (90.78%), Postives = 264/282 (93.62%), Query Frame = 1
BLAST of Cp4.1LG01g17050 vs. NCBI nr
Match: gi|657993764|ref|XP_008389179.1| (PREDICTED: 54S ribosomal protein L10, mitochondrial-like [Malus domestica]) HSP 1 Score: 418.3 bits (1074), Expect = 1.1e-113 Identity = 224/278 (80.58%), Postives = 234/278 (84.17%), Query Frame = 1
BLAST of Cp4.1LG01g17050 vs. NCBI nr
Match: gi|595797630|ref|XP_007201295.1| (hypothetical protein PRUPE_ppa008724mg [Prunus persica]) HSP 1 Score: 417.2 bits (1071), Expect = 2.4e-113 Identity = 226/282 (80.14%), Postives = 242/282 (85.82%), Query Frame = 1
BLAST of Cp4.1LG01g17050 vs. NCBI nr
Match: gi|694421823|ref|XP_009338744.1| (PREDICTED: 54S ribosomal protein L10, mitochondrial [Pyrus x bretschneideri]) HSP 1 Score: 416.8 bits (1070), Expect = 3.1e-113 Identity = 222/278 (79.86%), Postives = 235/278 (84.53%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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