Csa5G532450 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa5G532450
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	50S ribosomal protein L15, putative, expressed; contains IPR005749 (Ribosomal protein L15, bacterial-type), IPR021131 (Ribosomal protein L18e/L15P)
Location	Chr5 : 18935684 .. 18939590 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCAATTATTCAGTCTATTCCGGACTTACTTGCGGAACATAGACAACTGGTGCATTTTATTATTTGAACCGAAAAAAGGAAAAGGAAATGCTACGAAGACGACTGTGTTGCTTATTATCTAGCTCACTTGCTTCTGTTCATACTAAACCCCCACCTGCTATTGTAATAAACCAAGCATTATCGCGTCCATTCTTAGAGTTCCAGCAAAACCCTTTCCTTGATCGGTGTGTAGGTTCCCTTCCTTCTGGAAATATCTTTGGTTTTCGAGCTTTCAGCCTTTTGAGCTTAAATGATCTGAGAGATAAGGTTCCAAGAAAACAGAAAACAAGAAAGGGTCGTGGTATTGGTTCTGGGAAGGGGAAGACGGCTGGAAGAGGTCACAAGGGCCAAAGAGCAAGAGGTTCTGGGAAGCTTGGGTTTGAAGGTGGTCAAACCCCACTGCGCCGCAGGCTTCCTAAAAGAGGGTTTAAAAATCCTTTCAGCCTCACATTTCAGGTATTTGATTTATGTTTTCTTCTTTTTGGTTTGTTTCTTGTGATCTGTGTTCTAAAAAGTCCACAGCCCACTGAGTCATGCACCTTAGTGCGATTAAGTAGGCGCACACAACCTTTGTGTGACTGTCTCACTTTAAATAATCTCGAGGCTCCCTTAGTGAAGCCCACTTGAAGCTCTGTCTCAAGGCTTGTGATGTTTGCCTCAATGCCTCGAGCTTGATTTCTTACTCTTTCCTCTTTTAGTATTTAAGTAATAATTATATTGATATTCCTACCATCTGTTAAAAGCTCTATTTTGTTGAGCTTTTTATTATTATTCATCATACTAATTTTCTTCATACTTCAAACATTTACATTTTTCTATTGTGCACCCCGAGCTTTATTTATTTCTTAAAGAACTTATTTCCTTCCTTTGATGCAGAATTGTATAATGCATTCCGTTTTCATCTTGAAGAAAGCATGTCTTTAATATCCATATCTACTTTTTTTTGCTGTGAATTGCATGTGATGTCTTAAGCAATTCATATTGCATGATCTTTGAAGATTTACCTTCTGCACTTTGCATTACTTAATGCACAGCACAGTTGGTATCTTCTGGTGTTTGGTCCCTAGCACATATATACATGCGCGCGCACACAGATTTGTTTGGGCAGAATATTTTGGAAAATTGCATTAGATGACAAAAAAATTTAGAAAGAAGCAACCCATAGCACCTCCTTTTTGCATATTGCAAATATGACAAATATAACAAATATGACAAATAATTAAATATATCATAGGGCTATCCGCTTTTAAATTTGCTACTTTTGCAATTTAGAAAATGTAGTGACATAGGCTCTATTATTGTAAATTTTTTGCTATTTTTGCTAACACTCCGAATATTTTCTCCTTGAGTATTATGATATTTCTCTATTGATTCCTTTTTTCTTTTATGACAGCCAGTTGGTTTGGGAAAGATTGCTAAACTTATAAATGCTGGGAAAATTGATTCTTCTGAATTAATAACTATGAAAACTCTCAAGGTATTATTTTCTTTCTACCTTGATTAATTTATCAAAAACTTGAAGTAGTTGTTTTTAATATTGTGTCGAATGCATTATGAAAACAGGATACAGGTGCAATTGGAAAACAAATAGAGGATGGGGTAAGATTGATGGGACGTGGTGCCGAACATATCAAGTGGCCAATTCACCTAGAGGTAAATCTTCAACTAAAAAAAAAATTCTTTTTCCTTCTAACAAGTACTTCAAAACCTATATTTATATGGTCCTTAGTTAGTCTGATGTTCTGTATAAATTATTCATAAATCTGGGGGTATTTTCATCTCATGCTACTAATATGAAGCTTATGTACACTCTTCTTGAAGAAGGTTCTAGTGCTGCAGATGTTCTTCCAAGGGTTTCATTTAGCCTCCTTTCTAGTCTGGTTTGGGATCCAGTTGCATTCAGATTTCAGTTTACCCGTATGTACTATATATTGTTTTAAAAAAGGAACAAAACTCTTTTATTGATATAATAATGAGACAAGGCTTATAGTATGCAAGAATTGTACAATGAGCTGAAAACCTAAGGATCGTAAGGAACGCTTGGAAATTCAACTATGTTGACACCCCCTTATCAAAAATGGAAACCTTACAAAACTATCAAAACTTTCCATTTGAGACCCAACGAAGCCTAGATGACAGTGTCAGCTAATACAAAGGAGTCTGAAGAGATAATTCCTTCTAGAACAAAAGGCTAATCAACAAAAGCAAGAGAACAAAAGGCCAACCGGCTCCATGCCCACAGATAAGATGAAAACGTAAAAGCTCTCCAAATCATGTTGAGCTCCAGGAGTTCTGTAACTGTCAAACTCCTTAGAAGGATGCATCAAGATGAAGCATTTCTACGAGCGATTTCATTAGAATCCAACCAACCAAGGGAATGGTCATGGTTCCTTTTAAACCATAAATCTGCCAAAATCACATCTGCCAAAATCACTTTTACTGCAAACGAGTGGTTTTGTTGAACAAAGCCCTCCTACAAACTGCCATACCGATCCTCTAAAATCATCACTTTCCATGATGGCGAAGTCTCAAGCTAAAACCTTATAACTCCATAGACACTTGATGAAACACAAATAGAAAACTTTTTTCTTTGATTCTTGAATAAGTGCCAAATCCGAATTATGAGACTTTAAAAAAACTTTTGAGGCCGATCTTTTTTTGGATTTTTCAATCCGCTAGAATTTCATGAAACAATTTTCATTGTCTATCGAACTTTTCACTAACATGGTATGAAATGAAATGAATAAATAAGTACGTAGCAATATCTACTCTGTTTTACAAAACATTTTCAGGTAGAAGTTCTGAAACAACAATGTAATAAAGTTCAGAATAGGGTTGTAAATGACTCGGTTTGGCTTTGTTACTGTATAAAACCAGAGCCGAACCTGCACTTCATCTATCACCTTTGAAGTTACCTTATTACCCTTTTGAGAGTAATGTATAAAGGATTGGGGTCTTACAGAATATTCTTTCTGTTTGTGTAGCTTGTGCAGACATTGGTATTTGCTTGTGATTGGCAATCTTAGTTAGAATATTCCTTATCCTTATTTAGAATATCCTTTCTGTTTGTGTAGCTTGTGCAGACATTGTTATTTGCTTGCGATTGACATTCTTAGTTTACACAAAGAGATTGCAAAACTTGTATTTCCTAATTTTGTTATAGTCAAAGCTCTGAAGTCTGAAATCTGAAGTCTTTCATCTTTAACCAAGTGGATTGTTCCAAGAGCCCCAGATTTAACGATCAAGAGCTTCTTGCACTTGGCACTAACCTTCAATGTGTGATGTTCAGGTGTCGAGGGTCACTGTTCGAGCAAAAGAAGCTGTCGAAGCTGCAGGTGGGACTGTTCGAAGAGTATATTACAACAAATTAGGCCTTCGGGCGCTCCTCAAGCCCGAGTGGTTTGAAAAGAAAGGGAGACTCCTACCACGTGCGGCAAGGCCACCACCAAAGCAACAAGACAAAGTCGACAGCATTGGCCGCTTGCCTGCTCCAACTAAACCTATTCCTTTTTCAGTTGAATATGAAGATGGAGGAAAGGCAGCGTCCAATTTGTCTACCTGAGCATCATACTTCGATTTAAGGAATTTAAGTTTTGGTTGTCATTTTCAACTGCATTCTCTCTAGTAATATGCTCATGGTTTTGTTTCTATTAATATTCACACATATGTTAGGATTAATGATGGATGTCGGCCGCATTTCACCTGAGATTTTACGGTTTCAGGGTGGTAATCAAAATCACGTTGTTTTATCTACAATCGAGTTCAATAAAAGATAATATGTTCATACGTTTTGGGCAAATATCAATTTAACCCCTTGGCTGCATTAACTGAAACTTTGAACTAATGATAATTGTTTCAATTTAAACCAA

mRNA sequence

ATGCTACGAAGACGACTGTGTTGCTTATTATCTAGCTCACTTGCTTCTGTTCATACTAAACCCCCACCTGCTATTGTAATAAACCAAGCATTATCGCGTCCATTCTTAGAGTTCCAGCAAAACCCTTTCCTTGATCGGTGTGTAGGTTCCCTTCCTTCTGGAAATATCTTTGGTTTTCGAGCTTTCAGCCTTTTGAGCTTAAATGATCTGAGAGATAAGGTTCCAAGAAAACAGAAAACAAGAAAGGGTCGTGGTATTGGTTCTGGGAAGGGGAAGACGGCTGGAAGAGGTCACAAGGGCCAAAGAGCAAGAGGTTCTGGGAAGCTTGGGTTTGAAGGTGGTCAAACCCCACTGCGCCGCAGGCTTCCTAAAAGAGGGTTTAAAAATCCTTTCAGCCTCACATTTCAGCCAGTTGGTTTGGGAAAGATTGCTAAACTTATAAATGCTGGGAAAATTGATTCTTCTGAATTAATAACTATGAAAACTCTCAAGGATACAGGTGCAATTGGAAAACAAATAGAGGATGGGGTAAGATTGATGGGACGTGGTGCCGAACATATCAAGTGGCCAATTCACCTAGAGGTGTCGAGGGTCACTGTTCGAGCAAAAGAAGCTGTCGAAGCTGCAGGTGGGACTGTTCGAAGAGTATATTACAACAAATTAGGCCTTCGGGCGCTCCTCAAGCCCGAGTGGTTTGAAAAGAAAGGGAGACTCCTACCACGTGCGGCAAGGCCACCACCAAAGCAACAAGACAAAGTCGACAGCATTGGCCGCTTGCCTGCTCCAACTAAACCTATTCCTTTTTCAGTTGAATATGAAGATGGAGGAAAGGCAGCGTCCAATTTGTCTACCTGA

Coding sequence (CDS)

ATGCTACGAAGACGACTGTGTTGCTTATTATCTAGCTCACTTGCTTCTGTTCATACTAAACCCCCACCTGCTATTGTAATAAACCAAGCATTATCGCGTCCATTCTTAGAGTTCCAGCAAAACCCTTTCCTTGATCGGTGTGTAGGTTCCCTTCCTTCTGGAAATATCTTTGGTTTTCGAGCTTTCAGCCTTTTGAGCTTAAATGATCTGAGAGATAAGGTTCCAAGAAAACAGAAAACAAGAAAGGGTCGTGGTATTGGTTCTGGGAAGGGGAAGACGGCTGGAAGAGGTCACAAGGGCCAAAGAGCAAGAGGTTCTGGGAAGCTTGGGTTTGAAGGTGGTCAAACCCCACTGCGCCGCAGGCTTCCTAAAAGAGGGTTTAAAAATCCTTTCAGCCTCACATTTCAGCCAGTTGGTTTGGGAAAGATTGCTAAACTTATAAATGCTGGGAAAATTGATTCTTCTGAATTAATAACTATGAAAACTCTCAAGGATACAGGTGCAATTGGAAAACAAATAGAGGATGGGGTAAGATTGATGGGACGTGGTGCCGAACATATCAAGTGGCCAATTCACCTAGAGGTGTCGAGGGTCACTGTTCGAGCAAAAGAAGCTGTCGAAGCTGCAGGTGGGACTGTTCGAAGAGTATATTACAACAAATTAGGCCTTCGGGCGCTCCTCAAGCCCGAGTGGTTTGAAAAGAAAGGGAGACTCCTACCACGTGCGGCAAGGCCACCACCAAAGCAACAAGACAAAGTCGACAGCATTGGCCGCTTGCCTGCTCCAACTAAACCTATTCCTTTTTCAGTTGAATATGAAGATGGAGGAAAGGCAGCGTCCAATTTGTCTACCTGA

Protein sequence

MLRRRLCCLLSSSLASVHTKPPPAIVINQALSRPFLEFQQNPFLDRCVGSLPSGNIFGFRAFSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQRARGSGKLGFEGGQTPLRRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGVRLMGRGAEHIKWPIHLEVSRVTVRAKEAVEAAGGTVRRVYYNKLGLRALLKPEWFEKKGRLLPRAARPPPKQQDKVDSIGRLPAPTKPIPFSVEYEDGGKAASNLST*

Homology

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BLAST of Csa5G532450 vs. Swiss-Prot
Match: RL15_RHOPB (50S ribosomal protein L15 OS=Rhodopseudomonas palustris (strain BisB18) GN=rplO PE=3 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.1e-30
Identity = 77/152 (50.66%), Postives = 100/152 (65.79%), Query Frame = 1


Query: 65  LSLNDLRDKV-PRKQKTRKGRGIGSGKGKTAGRGHKGQRARGSGKL-GFEGGQTPLRRRL 124
           + L+D+ D    RK++ R GRGIGSGKGKTAGRG KGQ AR   ++ GFEGGQ PL RRL
Sbjct: 1   MKLSDIADNAGSRKKRMRVGRGIGSGKGKTAGRGGKGQTARSGVRIKGFEGGQMPLHRRL 60

Query: 125 PKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGVRLMGR 184
           PKRGF N F L F  + L ++ + ++A  ID S +I  +TL  +G + ++ +DGVRL+GR
Sbjct: 61  PKRGFNNIFRLDFAEINLDRLQEAVDAKTIDGSGVINAETLVASGVL-RRAKDGVRLLGR 120

Query: 185 GAEHIKWPIHLEVSRVTVRAKEAVEAAGGTVR 215
           G   +K  + +EV   T  A EAVE AGGTV+
Sbjct: 121 G--ELKAKLTIEVHGATKTAIEAVEKAGGTVK 149

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BLAST of Csa5G532450 vs. Swiss-Prot
Match: RL15_RHORT (50S ribosomal protein L15 OS=Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG 4362 / NCIB 8255 / S1) GN=rplO PE=3 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.5e-30
Identity = 76/151 (50.33%), Postives = 101/151 (66.89%), Query Frame = 1


Query: 65  LSLNDLRDKV-PRKQKTRKGRGIGSGKGKTAGRGHKGQRAR-GSGKLGFEGGQTPLRRRL 124
           + LN+LRD     K + R GRGIGSGKGKTAGRG KGQ++R G    GFEGGQ P+ RRL
Sbjct: 1   MKLNELRDNPGATKNRIRVGRGIGSGKGKTAGRGVKGQKSREGVSINGFEGGQMPIYRRL 60

Query: 125 PKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGVRLMGR 184
           PKRGF NP   +F  V L +I K I+A K+D++ +IT K L + G + ++ +DGVRL+G+
Sbjct: 61  PKRGFNNPTRKSFAVVNLDRIQKAIDAKKLDATAVITEKALIEAGLV-RRSQDGVRLLGK 120

Query: 185 GAEHIKWPIHLEVSRVTVRAKEAVEAAGGTV 214
           G   +K  + +EV+  +  A+E VE AGGT+
Sbjct: 121 GELSVK--VAIEVAGASATAREGVEKAGGTL 148

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BLAST of Csa5G532450 vs. Swiss-Prot
Match: RL15_GLUDA (50S ribosomal protein L15 OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) GN=rplO PE=3 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 3.3e-30
Identity = 77/152 (50.66%), Postives = 96/152 (63.16%), Query Frame = 1


Query: 65  LSLNDLRDKV-PRKQKTRKGRGIGSGKGKTAGRGHKGQRARGSGKL-GFEGGQTPLRRRL 124
           ++LN+LRD    R +K R GRGIGSGKGKT+G+G KGQ+AR    L GFEGGQ PL RRL
Sbjct: 1   MNLNELRDNAGSRYRKKRLGRGIGSGKGKTSGKGVKGQKAREGVSLNGFEGGQLPLYRRL 60

Query: 125 PKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGVRLMGR 184
           PKRGFKN F   + PV LG + K I  GKID+  ++T   L+  G +G     GVRL+ +
Sbjct: 61  PKRGFKNIFRKEYAPVNLGALDKAIADGKIDAGTVVTEDVLRTAGLVGSGKFAGVRLLAK 120

Query: 185 GAEHIKWPIHLEVSRVTVRAKEAVEAAGGTVR 215
           G   +   + +EVS  +  A  AVE AGG+VR
Sbjct: 121 G--ELARAVTIEVSGASATAVAAVEKAGGSVR 150

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BLAST of Csa5G532450 vs. Swiss-Prot
Match: RL15_XANP2 (50S ribosomal protein L15 OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=rplO PE=3 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 3.3e-30
Identity = 78/151 (51.66%), Postives = 97/151 (64.24%), Query Frame = 1


Query: 65  LSLNDLRDKV-PRKQKTRKGRGIGSGKGKTAGRGHKGQRAR-GSGKLGFEGGQTPLRRRL 124
           ++L D+RD    RK++ R GRGIGSGKGKTAGRG KGQ+AR G    GFEGGQ PL RRL
Sbjct: 1   MNLEDIRDNPGARKKRMRVGRGIGSGKGKTAGRGVKGQKARTGVAIKGFEGGQMPLHRRL 60

Query: 125 PKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGVRLMGR 184
           PKRGF N F L +  V LGKI   + AGK+D+ + +T   L   G + ++ +DGVR++G 
Sbjct: 61  PKRGFHNIFRLDYNEVSLGKIQAAVEAGKLDAGQPVTEAALVAAGVL-RRAKDGVRVLGT 120

Query: 185 GAEHIKWPIHLEVSRVTVRAKEAVEAAGGTV 214
           G    K  + LEV+  T  A  AVE AGG+V
Sbjct: 121 GELSAK--VTLEVAYATKSAVAAVEKAGGSV 148

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BLAST of Csa5G532450 vs. Swiss-Prot
Match: RL15_BRASO (50S ribosomal protein L15 OS=Bradyrhizobium sp. (strain ORS278) GN=rplO PE=3 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 3.3e-30
Identity = 75/152 (49.34%), Postives = 103/152 (67.76%), Query Frame = 1


Query: 65  LSLNDLRDKV-PRKQKTRKGRGIGSGKGKTAGRGHKGQRARGSGKL-GFEGGQTPLRRRL 124
           + L+D+ D    RK++ R GRGIGSGKGKT+GRG KGQ AR   ++ GFEGGQ P+ RRL
Sbjct: 1   MKLSDIADNAGARKKRMRVGRGIGSGKGKTSGRGGKGQTARSGVRIKGFEGGQMPMHRRL 60

Query: 125 PKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGVRLMGR 184
           PKRGF N F+L F  + L +I + I+A K+D+  +I  ++L  +GA+ ++ +DGVRL+GR
Sbjct: 61  PKRGFNNIFALDFVEINLDRIQQAIDAKKLDAGSVINAESLVKSGAL-RRSKDGVRLLGR 120

Query: 185 GAEHIKWPIHLEVSRVTVRAKEAVEAAGGTVR 215
           G   +K  I++EV   +  A  AVE AGGTV+
Sbjct: 121 G--ELKAKINIEVYGASKSAIAAVEKAGGTVK 149

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BLAST of Csa5G532450 vs. TrEMBL
Match: A0A0A0KP79_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G532450 PE=3 SV=1)

HSP 1 Score: 569.7 bits (1467), Expect = 2.0e-159
Identity = 284/284 (100.00%), Postives = 284/284 (100.00%), Query Frame = 1


Query: 1   MLRRRLCCLLSSSLASVHTKPPPAIVINQALSRPFLEFQQNPFLDRCVGSLPSGNIFGFR 60
           MLRRRLCCLLSSSLASVHTKPPPAIVINQALSRPFLEFQQNPFLDRCVGSLPSGNIFGFR
Sbjct: 1   MLRRRLCCLLSSSLASVHTKPPPAIVINQALSRPFLEFQQNPFLDRCVGSLPSGNIFGFR 60

Query: 61  AFSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQRARGSGKLGFEGGQTPLRR 120
           AFSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQRARGSGKLGFEGGQTPLRR
Sbjct: 61  AFSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQRARGSGKLGFEGGQTPLRR 120

Query: 121 RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGVRLM 180
           RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGVRLM
Sbjct: 121 RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGVRLM 180

Query: 181 GRGAEHIKWPIHLEVSRVTVRAKEAVEAAGGTVRRVYYNKLGLRALLKPEWFEKKGRLLP 240
           GRGAEHIKWPIHLEVSRVTVRAKEAVEAAGGTVRRVYYNKLGLRALLKPEWFEKKGRLLP
Sbjct: 181 GRGAEHIKWPIHLEVSRVTVRAKEAVEAAGGTVRRVYYNKLGLRALLKPEWFEKKGRLLP 240

Query: 241 RAARPPPKQQDKVDSIGRLPAPTKPIPFSVEYEDGGKAASNLST 285
           RAARPPPKQQDKVDSIGRLPAPTKPIPFSVEYEDGGKAASNLST
Sbjct: 241 RAARPPPKQQDKVDSIGRLPAPTKPIPFSVEYEDGGKAASNLST 284

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BLAST of Csa5G532450 vs. TrEMBL
Match: M5VMS3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008724mg PE=3 SV=1)

HSP 1 Score: 419.5 bits (1077), Expect = 3.3e-114
Identity = 228/294 (77.55%), Postives = 244/294 (82.99%), Query Frame = 1


Query: 1   MLRRRLCCLLSSSL--ASVHTKPPPAIVINQALSRPFLEFQQNPFLDRCVGSLPS-GNIF 60
           MLRRR+  LLS+++  +S+ TKP         LS   + FQ   FL +C    PS  N  
Sbjct: 41  MLRRRVTSLLSTTIRSSSIRTKP--------TLSASPISFQSLHFL-QCPNPNPSISNAK 100

Query: 61  GF-------RAFSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQRARGSGKLG 120
           GF       RA+SLLSLNDLR KVPRKQKTRKGRGIGSGKGKTAGRGHKGQ+ARGSGKLG
Sbjct: 101 GFGFQPEGMRAYSLLSLNDLRGKVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKLG 160

Query: 121 FEGGQTPLRRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIG 180
           FEGGQTPLRRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIG
Sbjct: 161 FEGGQTPLRRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIG 220

Query: 181 KQIEDGVRLMGRGAEHIKWPIHLEVSRVTVRAKEAVEAAGGTVRRVYYNKLGLRALLKPE 240
           KQI+DGVRLMGRGAE I+WPIH EVSRVTVRAKEAVEAAGG+VRRVYYNKLG RALLKPE
Sbjct: 221 KQIKDGVRLMGRGAEQIQWPIHFEVSRVTVRAKEAVEAAGGSVRRVYYNKLGFRALLKPE 280

Query: 241 WFEKKGRLLPRAARPPPKQQDKVDSIGRLPAPTKPIPFSVEYEDGGKAASNLST 285
           WFEKKGRLLP+AARPPPKQ+DKVDSIGRLPAPTKPIPF  E E     AS+ ST
Sbjct: 281 WFEKKGRLLPKAARPPPKQKDKVDSIGRLPAPTKPIPFFTEEE----VASSSST 321

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BLAST of Csa5G532450 vs. TrEMBL
Match: A0A061E357_THECC (Ribosomal protein L18e/L15 superfamily protein OS=Theobroma cacao GN=TCM_007684 PE=3 SV=1)

HSP 1 Score: 412.1 bits (1058), Expect = 5.3e-112
Identity = 215/281 (76.51%), Postives = 235/281 (83.63%), Query Frame = 1


Query: 1   MLRRRLCCLLSSSLASVHTKPPPAIVINQALSRPFLEFQQNPFLDRCVGSLPSGNIF--G 60
           M+RRRL  ++S+S   + TKP    + N +   P L F     L      + +G+ +  G
Sbjct: 1   MIRRRLSPIISASSHFLKTKP----ISNPS---PILHFHSFQSLQCSNPVIKNGSFWFQG 60

Query: 61  FRAFSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQRARGSGKLGFEGGQTPL 120
            RA+SLLSLNDL+DKVPRKQKTRKGRGIGSGKGKTAGRGHKGQ+ARG+GKLGFEGGQTP+
Sbjct: 61  IRAYSLLSLNDLKDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGNGKLGFEGGQTPM 120

Query: 121 RRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGVR 180
           RRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDS ELITMKTLKD GAIGKQIEDGVR
Sbjct: 121 RRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSHELITMKTLKDAGAIGKQIEDGVR 180

Query: 181 LMGRGAEHIKWPIHLEVSRVTVRAKEAVEAAGGTVRRVYYNKLGLRALLKPEWFEKKGRL 240
           LMGRGAE IKWPIHLEVSRVTVRAKEAVEAAGG+VRRV+YNKLGLRALLKPEWFEKKGRL
Sbjct: 181 LMGRGAEQIKWPIHLEVSRVTVRAKEAVEAAGGSVRRVHYNKLGLRALLKPEWFEKKGRL 240

Query: 241 LPRAARPPPKQQDKVDSIGRLPAPTKPIPFSVEYEDGGKAA 280
           LP+ ARPPPK +DKVDSIGRLPAPTKPIPF  E E     A
Sbjct: 241 LPKPARPPPKLKDKVDSIGRLPAPTKPIPFFTEEEPASSPA 274

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BLAST of Csa5G532450 vs. TrEMBL
Match: W9R8K8_9ROSA (50S ribosomal protein L15 OS=Morus notabilis GN=L484_012191 PE=3 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 2.6e-111
Identity = 217/277 (78.34%), Postives = 235/277 (84.84%), Query Frame = 1


Query: 1   MLRRRLCCLLSSSLASVHTKPPPAIVINQALSRPFLEFQQNPFLDRCVGSLPSGNIFGF- 60
           MLRRR+C +LSSS+ +  T  P  + I Q+L   FL+   NP      G    G  FGF 
Sbjct: 1   MLRRRICSILSSSIFNAITPRP--LPIQQSLR--FLQCP-NPNSKLNNGGGEFGLWFGFG 60

Query: 61  --RAFSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQRARGSGKLGFEGGQTP 120
             RA+SLLSLNDLR  VPRKQKTRKGRGIGSGKGKTAGRGHKGQ+ARGSGKLGFEGGQTP
Sbjct: 61  GFRAYSLLSLNDLRGNVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKLGFEGGQTP 120

Query: 121 LRRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGV 180
           LRRR PKRGFKNPFSLTFQPVGLGKIAKLIN GKIDS ELITMKTLKDT AIGKQI+DGV
Sbjct: 121 LRRRFPKRGFKNPFSLTFQPVGLGKIAKLINEGKIDSHELITMKTLKDTEAIGKQIKDGV 180

Query: 181 RLMGRGAEHIKWPIHLEVSRVTVRAKEAVEAAGGTVRRVYYNKLGLRALLKPEWFEKKGR 240
           RLMGRGA+ IKWPIHLEVSRVTVRAK AVEAAGG+VR+VYYNKLG RALLKPEWFEKKGR
Sbjct: 181 RLMGRGADQIKWPIHLEVSRVTVRAKAAVEAAGGSVRKVYYNKLGFRALLKPEWFEKKGR 240

Query: 241 LLPRAARPPPKQQDKVDSIGRLPAPTKPIPFSVEYED 275
           LLP+AARPPPKQ+DKVDSIGRLPAPTKPIPF +E ++
Sbjct: 241 LLPKAARPPPKQRDKVDSIGRLPAPTKPIPFFIEEKE 272

[Close]

BLAST of Csa5G532450 vs. TrEMBL
Match: I1MJF2_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_15G264500 PE=3 SV=1)

HSP 1 Score: 407.5 bits (1046), Expect = 1.3e-110
Identity = 212/272 (77.94%), Postives = 231/272 (84.93%), Query Frame = 1


Query: 1   MLRRRLCCLLSSSLA-SVHTKPPPAIVINQALSRPFLEFQQNPFLDRCVGSLPSGNIFGF 60
           MLRRRL  L +S +  S H+KP   +      S PF + + +P   R +      +  GF
Sbjct: 1   MLRRRLSVLSTSIIRRSNHSKP--ILRYPSIQSHPF-QLRHSPSAYRIISPNAFPDFQGF 60

Query: 61  RAFSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQRARGSGKLGFEGGQTPLR 120
           RA+SLLSLNDLRDKVPRKQ TRKGRGIGSGKGKTAGRGHKGQRAR   KLGFEGGQTPLR
Sbjct: 61  RAYSLLSLNDLRDKVPRKQPTRKGRGIGSGKGKTAGRGHKGQRARKGIKLGFEGGQTPLR 120

Query: 121 RRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGVRL 180
           RRLPKRGFKNPFSLTFQP+GLGKIAK INAGKIDSSELITMKTLKD G +GKQ++DGVRL
Sbjct: 121 RRLPKRGFKNPFSLTFQPIGLGKIAKFINAGKIDSSELITMKTLKDAGVLGKQMKDGVRL 180

Query: 181 MGRGAEHIKWPIHLEVSRVTVRAKEAVEAAGGTVRRVYYNKLGLRALLKPEWFEKKGRLL 240
           MGRG+E IKWPIHLEVSRVTVRAKEAVEAAGG+VRRVYYNKLGL+AL+KPEWFEKKGRLL
Sbjct: 181 MGRGSEQIKWPIHLEVSRVTVRAKEAVEAAGGSVRRVYYNKLGLKALVKPEWFEKKGRLL 240

Query: 241 PRAARPPPKQQDKVDSIGRLPAPTKPIPFSVE 272
           PRAARPPPKQ+DKVDSIGRLPAPTKPIPF VE
Sbjct: 241 PRAARPPPKQKDKVDSIGRLPAPTKPIPFLVE 269

[Close]

BLAST of Csa5G532450 vs. TAIR10
Match: AT5G64670.1 (AT5G64670.1 Ribosomal protein L18e/L15 superfamily protein)

HSP 1 Score: 400.6 bits (1028), Expect = 8.1e-112
Identity = 209/271 (77.12%), Postives = 223/271 (82.29%), Query Frame = 1


Query: 1   MLRRRLCCLLSSSL--ASVHTKPPPAIVINQALSRPFLEFQQNPFLDRCVGSLPSGNIF- 60
           MLRRRL  ++S+SL  +S H    P  +I    S P L+ + +P   +   S      F 
Sbjct: 1   MLRRRLLSIISTSLINSSFHQTAKPRFII----SSPLLQCRPSPISTQIPTSTSRALSFQ 60

Query: 61  GFRAFSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQRARGSGKLGFEGGQTP 120
           G RA+SLLSLNDLRD VPRK KTRKGRGIGSGKGKTAGRGHKGQ+ARG+ K GFEGGQTP
Sbjct: 61  GIRAYSLLSLNDLRDNVPRKLKTRKGRGIGSGKGKTAGRGHKGQKARGTMKFGFEGGQTP 120

Query: 121 LRRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGV 180
           LRRRLPKRGFKN F L FQPVGLGKIAKLINAGKIDS ELITMKTLKD GAIGKQIEDGV
Sbjct: 121 LRRRLPKRGFKNKFKLHFQPVGLGKIAKLINAGKIDSHELITMKTLKDVGAIGKQIEDGV 180

Query: 181 RLMGRGAEHIKWPIHLEVSRVTVRAKEAVEAAGGTVRRVYYNKLGLRALLKPEWFEKKGR 240
           RLMGRGA+ IKWP+H EVSRVTVRAKE VEAAGG+VRRVYYNKLGLRALLKPEWFEKKGR
Sbjct: 181 RLMGRGADDIKWPLHFEVSRVTVRAKEVVEAAGGSVRRVYYNKLGLRALLKPEWFEKKGR 240

Query: 241 LLPRAARPPPKQQDKVDSIGRLPAPTKPIPF 269
           LLP+AARPPPKQQDKVDSIGRLPAP KPIPF
Sbjct: 241 LLPKAARPPPKQQDKVDSIGRLPAPKKPIPF 267

[Close]

BLAST of Csa5G532450 vs. TAIR10
Match: AT3G25920.1 (AT3G25920.1 ribosomal protein L15)

HSP 1 Score: 71.2 bits (173), Expect = 1.1e-12
Identity = 60/184 (32.61%), Postives = 93/184 (50.54%), Query Frame = 1


Query: 76  RKQKTRKGRGIGSGKGKTAGRGHKGQRAR-GSGKL-GFEGGQTPLRRRLPK-RGFKNPFS 135
           RK++ RKGRGI +G+G + G G +GQ++R G G + GFEGGQT L RRLPK RG      
Sbjct: 93  RKKQKRKGRGISAGQGASCGFGMRGQKSRSGPGIMRGFEGGQTALYRRLPKLRGIAGGMR 152

Query: 136 LTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAI---GKQIEDGVRLMGRGAEHIKW 195
            +  P  L    K I        + ++++TLK  G I   G++ +  ++++G G   +K 
Sbjct: 153 -SGLPKYLPVNIKDIETAGFQEGDEVSLETLKQKGLINPSGRERKLPLKILGTGELSMK- 212

Query: 196 PIHLEVSRVTVRAKEAVEAAGGTVRRVYYNKLGLRALL------KPEWFEKKGRLLPRAA 248
            +  +    + +AKE +EA+G T+  +   K  ++  +        E+F KK      AA
Sbjct: 213 -LTFKARAFSTQAKEKLEASGCTLTVLPGRKKWVKPSVAKNQARADEYFAKKRAAAAEAA 272

[Close]

BLAST of Csa5G532450 vs. NCBI nr
Match: gi|449450123|ref|XP_004142813.1| (PREDICTED: 54S ribosomal protein L10, mitochondrial [Cucumis sativus])

HSP 1 Score: 569.7 bits (1467), Expect = 2.9e-159
Identity = 284/284 (100.00%), Postives = 284/284 (100.00%), Query Frame = 1


Query: 1   MLRRRLCCLLSSSLASVHTKPPPAIVINQALSRPFLEFQQNPFLDRCVGSLPSGNIFGFR 60
           MLRRRLCCLLSSSLASVHTKPPPAIVINQALSRPFLEFQQNPFLDRCVGSLPSGNIFGFR
Sbjct: 1   MLRRRLCCLLSSSLASVHTKPPPAIVINQALSRPFLEFQQNPFLDRCVGSLPSGNIFGFR 60

Query: 61  AFSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQRARGSGKLGFEGGQTPLRR 120
           AFSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQRARGSGKLGFEGGQTPLRR
Sbjct: 61  AFSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQRARGSGKLGFEGGQTPLRR 120

Query: 121 RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGVRLM 180
           RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGVRLM
Sbjct: 121 RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGVRLM 180

Query: 181 GRGAEHIKWPIHLEVSRVTVRAKEAVEAAGGTVRRVYYNKLGLRALLKPEWFEKKGRLLP 240
           GRGAEHIKWPIHLEVSRVTVRAKEAVEAAGGTVRRVYYNKLGLRALLKPEWFEKKGRLLP
Sbjct: 181 GRGAEHIKWPIHLEVSRVTVRAKEAVEAAGGTVRRVYYNKLGLRALLKPEWFEKKGRLLP 240

Query: 241 RAARPPPKQQDKVDSIGRLPAPTKPIPFSVEYEDGGKAASNLST 285
           RAARPPPKQQDKVDSIGRLPAPTKPIPFSVEYEDGGKAASNLST
Sbjct: 241 RAARPPPKQQDKVDSIGRLPAPTKPIPFSVEYEDGGKAASNLST 284

[Close]

BLAST of Csa5G532450 vs. NCBI nr
Match: gi|659121261|ref|XP_008460571.1| (PREDICTED: 54S ribosomal protein L10, mitochondrial [Cucumis melo])

HSP 1 Score: 547.0 bits (1408), Expect = 2.0e-152
Identity = 276/284 (97.18%), Postives = 277/284 (97.54%), Query Frame = 1


Query: 1   MLRRRLCCLLSSSLASVHTKPPPAIVINQALSRPFLEFQQNPFLDRCVGSLPSGNIFGFR 60
           MLRR+LC LLSSSLASV TKPPPAIVINQAL  PFLEFQQNP LDRCVGS  SGNIFGFR
Sbjct: 1   MLRRQLCYLLSSSLASVRTKPPPAIVINQALLHPFLEFQQNPCLDRCVGSPLSGNIFGFR 60

Query: 61  AFSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQRARGSGKLGFEGGQTPLRR 120
           AFSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQRARGSGKLGFEGGQTPLRR
Sbjct: 61  AFSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQRARGSGKLGFEGGQTPLRR 120

Query: 121 RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGVRLM 180
           RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGVRLM
Sbjct: 121 RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGVRLM 180

Query: 181 GRGAEHIKWPIHLEVSRVTVRAKEAVEAAGGTVRRVYYNKLGLRALLKPEWFEKKGRLLP 240
           GRGAEHIKWPIHLEVSRVTVRAKEAVEAAGGTVRRVYYNKLGLRALLKPEWFEKKGRLLP
Sbjct: 181 GRGAEHIKWPIHLEVSRVTVRAKEAVEAAGGTVRRVYYNKLGLRALLKPEWFEKKGRLLP 240

Query: 241 RAARPPPKQQDKVDSIGRLPAPTKPIPFSVEYEDGGKAASNLST 285
           RAARPPPKQQDKVDSIGRLPAPTKPIPFSVEYEDGGKAASNLST
Sbjct: 241 RAARPPPKQQDKVDSIGRLPAPTKPIPFSVEYEDGGKAASNLST 284

[Close]

BLAST of Csa5G532450 vs. NCBI nr
Match: gi|1009156926|ref|XP_015896497.1| (PREDICTED: 50S ribosomal protein L15-like [Ziziphus jujuba])

HSP 1 Score: 422.2 bits (1084), Expect = 7.4e-115
Identity = 219/274 (79.93%), Postives = 236/274 (86.13%), Query Frame = 1


Query: 1   MLRRRLCCLLSSSLASVHTKPPPAIVINQALSRPFLEFQQNPFLDRCVGSLPSGNIFGFR 60
           MLRRRL  LLS+++ S   +  P         RP    Q + +     G    G++ G R
Sbjct: 1   MLRRRLGSLLSTAILSNAGRTKPFFAAPSIPVRPIQVLQCHYYRKENGGF---GSLGGIR 60

Query: 61  AFSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQRARGSGKLGFEGGQTPLRR 120
           A+SLLSLNDLR K+PRKQKTRKGRGIGSGKGKTAGRGHKGQ+ARGSGKLGFEGGQTPLRR
Sbjct: 61  AYSLLSLNDLRPKLPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKLGFEGGQTPLRR 120

Query: 121 RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGVRLM 180
           RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQI+DGVRLM
Sbjct: 121 RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIKDGVRLM 180

Query: 181 GRGAEHIKWPIHLEVSRVTVRAKEAVEAAGGTVRRVYYNKLGLRALLKPEWFEKKGRLLP 240
           GRGAE IKWPIHLEVSRVTVRAKEAVEAAGG+VRRVYYNKLGLRALLKPEWFEKKGRLLP
Sbjct: 181 GRGAEQIKWPIHLEVSRVTVRAKEAVEAAGGSVRRVYYNKLGLRALLKPEWFEKKGRLLP 240

Query: 241 RAARPPPKQQDKVDSIGRLPAPTKPIPFSVEYED 275
           +AARPPPKQ+DKVDSIGRLPAPTKPIPF VE ++
Sbjct: 241 KAARPPPKQRDKVDSIGRLPAPTKPIPFLVEEKE 271

[Close]

BLAST of Csa5G532450 vs. NCBI nr
Match: gi|657993764|ref|XP_008389179.1| (PREDICTED: 54S ribosomal protein L10, mitochondrial-like [Malus domestica])

HSP 1 Score: 420.6 bits (1080), Expect = 2.2e-114
Identity = 222/279 (79.57%), Postives = 237/279 (84.95%), Query Frame = 1


Query: 1   MLRRRLCCLLSSSL--ASVHTKPPPAIVINQALSRPFLEFQQNPFLDRCVGSLPS---GN 60
           MLRRRL  LLS+++  +S+ TKPP  +     +    L F        C+   PS   G 
Sbjct: 1   MLRRRLPSLLSTTIFTSSIRTKPPFTLPTPSPIPSQSLHFLP------CLNPNPSFSNGK 60

Query: 61  IFGF---RAFSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQRARGSGKLGFE 120
            FGF   RA+SLLSLNDLR KVPRKQKTRKGRGIGSGKGKTAGRGHKGQ+ARGSGKLGFE
Sbjct: 61  GFGFQGVRAYSLLSLNDLRGKVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKLGFE 120

Query: 121 GGQTPLRRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQ 180
           GGQTPLRRRLPKRGF NPFSLTFQPVGLGKIA LINAGKIDSSELITMKTLKDTGAIGKQ
Sbjct: 121 GGQTPLRRRLPKRGFNNPFSLTFQPVGLGKIATLINAGKIDSSELITMKTLKDTGAIGKQ 180

Query: 181 IEDGVRLMGRGAEHIKWPIHLEVSRVTVRAKEAVEAAGGTVRRVYYNKLGLRALLKPEWF 240
           I+DGVRLMGRGAE I+WPIHLEVSRVTVRAKEAVEAAGG+VRRVYYNKLG RALLKPEWF
Sbjct: 181 IKDGVRLMGRGAEQIQWPIHLEVSRVTVRAKEAVEAAGGSVRRVYYNKLGFRALLKPEWF 240

Query: 241 EKKGRLLPRAARPPPKQQDKVDSIGRLPAPTKPIPFSVE 272
           EKKGRLLP+AARPPPKQ+DKVDSIGRLPAPTKPIPFS E
Sbjct: 241 EKKGRLLPKAARPPPKQKDKVDSIGRLPAPTKPIPFSTE 273

[Close]

BLAST of Csa5G532450 vs. NCBI nr
Match: gi|595797630|ref|XP_007201295.1| (hypothetical protein PRUPE_ppa008724mg [Prunus persica])

HSP 1 Score: 419.5 bits (1077), Expect = 4.8e-114
Identity = 228/294 (77.55%), Postives = 244/294 (82.99%), Query Frame = 1


Query: 1   MLRRRLCCLLSSSL--ASVHTKPPPAIVINQALSRPFLEFQQNPFLDRCVGSLPS-GNIF 60
           MLRRR+  LLS+++  +S+ TKP         LS   + FQ   FL +C    PS  N  
Sbjct: 41  MLRRRVTSLLSTTIRSSSIRTKP--------TLSASPISFQSLHFL-QCPNPNPSISNAK 100

Query: 61  GF-------RAFSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQRARGSGKLG 120
           GF       RA+SLLSLNDLR KVPRKQKTRKGRGIGSGKGKTAGRGHKGQ+ARGSGKLG
Sbjct: 101 GFGFQPEGMRAYSLLSLNDLRGKVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKLG 160

Query: 121 FEGGQTPLRRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIG 180
           FEGGQTPLRRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIG
Sbjct: 161 FEGGQTPLRRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIG 220

Query: 181 KQIEDGVRLMGRGAEHIKWPIHLEVSRVTVRAKEAVEAAGGTVRRVYYNKLGLRALLKPE 240
           KQI+DGVRLMGRGAE I+WPIH EVSRVTVRAKEAVEAAGG+VRRVYYNKLG RALLKPE
Sbjct: 221 KQIKDGVRLMGRGAEQIQWPIHFEVSRVTVRAKEAVEAAGGSVRRVYYNKLGFRALLKPE 280

Query: 241 WFEKKGRLLPRAARPPPKQQDKVDSIGRLPAPTKPIPFSVEYEDGGKAASNLST 285
           WFEKKGRLLP+AARPPPKQ+DKVDSIGRLPAPTKPIPF  E E     AS+ ST
Sbjct: 281 WFEKKGRLLPKAARPPPKQKDKVDSIGRLPAPTKPIPFFTEEE----VASSSST 321

The following BLAST results are available for this feature:

BLAST of Csa5G532450 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RL15_RHOPB	1.1e-30	50.66	50S ribosomal protein L15 OS=Rhodopseudomonas palustris (strain BisB18) GN=rplO ...	[more]
RL15_RHORT	1.5e-30	50.33	50S ribosomal protein L15 OS=Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1....	[more]
RL15_GLUDA	3.3e-30	50.66	50S ribosomal protein L15 OS=Gluconacetobacter diazotrophicus (strain ATCC 49037...	[more]
RL15_XANP2	3.3e-30	51.66	50S ribosomal protein L15 OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / ...	[more]
RL15_BRASO	3.3e-30	49.34	50S ribosomal protein L15 OS=Bradyrhizobium sp. (strain ORS278) GN=rplO PE=3 SV=...	[more]

BLAST of Csa5G532450 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KP79_CUCSA	2.0e-159	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G532450 PE=3 SV=1	[more]
M5VMS3_PRUPE	3.3e-114	77.55	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008724mg PE=3 SV=1	[more]
A0A061E357_THECC	5.3e-112	76.51	Ribosomal protein L18e/L15 superfamily protein OS=Theobroma cacao GN=TCM_007684 ...	[more]
W9R8K8_9ROSA	2.6e-111	78.34	50S ribosomal protein L15 OS=Morus notabilis GN=L484_012191 PE=3 SV=1	[more]
I1MJF2_SOYBN	1.3e-110	77.94	Uncharacterized protein OS=Glycine max GN=GLYMA_15G264500 PE=3 SV=1	[more]

BLAST of Csa5G532450 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G64670.1	8.1e-112	77.12	Ribosomal protein L18e/L15 superfamily protein	[more]
AT3G25920.1	1.1e-12	32.61	ribosomal protein L15	[more]

BLAST of Csa5G532450 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449450123\|ref\|XP_004142813.1\|	2.9e-159	100.00	PREDICTED: 54S ribosomal protein L10, mitochondrial [Cucumis sativus]	[more]
gi\|659121261\|ref\|XP_008460571.1\|	2.0e-152	97.18	PREDICTED: 54S ribosomal protein L10, mitochondrial [Cucumis melo]	[more]
gi\|1009156926\|ref\|XP_015896497.1\|	7.4e-115	79.93	PREDICTED: 50S ribosomal protein L15-like [Ziziphus jujuba]	[more]
gi\|657993764\|ref\|XP_008389179.1\|	2.2e-114	79.57	PREDICTED: 54S ribosomal protein L10, mitochondrial-like [Malus domestica]	[more]
gi\|595797630\|ref\|XP_007201295.1\|	4.8e-114	77.55	hypothetical protein PRUPE_ppa008724mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005749	Ribosomal_L15_bac-type
IPR021131	Ribosomal_L18e/L15P

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **Cellular Component**
Term	Definition
GO:0015934	large ribosomal subunit

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006412	translation
cellular_component	GO:0015934	large ribosomal subunit
molecular_function	GO:0003735	structural constituent of ribosome

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU102848	cucumber EST collection version 3.0	transcribed_cluster
CU127615	cucumber EST collection version 3.0	transcribed_cluster
CU133709	cucumber EST collection version 3.0	transcribed_cluster
CU160012	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa5G532450.1	Csa5G532450.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU160012	CU160012	transcribed_cluster
CU127615	CU127615	transcribed_cluster
CU133709	CU133709	transcribed_cluster
CU102848	CU102848	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005749	Ribosomal protein L15, bacterial-type	PANTHER	PTHR12934	50S RIBOSOMAL PROTEIN L15	coord: 59..275 score: 2.1E
IPR005749	Ribosomal protein L15, bacterial-type	TIGRFAMs	TIGR01071	TIGR01071	coord: 67..213 score: 2.4
IPR021131	Ribosomal protein L18e/L15P	PFAM	PF00828	Ribosomal_L27A	coord: 90..213 score: 4.7
IPR021131	Ribosomal protein L18e/L15P	unknown	SSF52080	Ribosomal proteins L15p and L18e	coord: 75..213 score: 1.7
None	No IPR available	GENE3D	G3DSA:3.100.10.10		coord: 95..214 score: 2.9
None	No IPR available	PANTHER	PTHR12934:SF12	39S RIBOSOMAL PROTEIN L15, MITOCHONDRIAL	coord: 59..275 score: 2.1E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa5G532450	Cla001875	Watermelon (97103) v1	cuwmB435
Csa5G532450	MELO3C022914	Melon (DHL92) v3.5.1	cumeB380
Csa5G532450	Lsi11G001070	Bottle gourd (USVL1VR-Ls)	culsiB337
Csa5G532450	MELO3C022914.2	Melon (DHL92) v3.6.1	cumedB363
Csa5G532450	Cla97C11G206400	Watermelon (97103) v2	cuwmbB364
Csa5G532450	CSPI05G18790	Wild cucumber (PI 183967)	cpicuB239
Csa5G532450	Cucsa.011740	Cucumber (Gy14) v1	cgycuB286
Csa5G532450	CmaCh04G018900	Cucurbita maxima (Rimu)	cmacuB759
Csa5G532450	CmoCh04G019940	Cucurbita moschata (Rifu)	cmocuB752
Csa5G532450	Cp4.1LG01g17050	Cucurbita pepo (Zucchini)	cpecuB453
Csa5G532450	CsGy5G018320	Cucumber (Gy14) v2	cgybcuB223

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa5G532450	Watermelon (Charleston Gray)	cuwcgB360