CmoCh04G019940 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G019940
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	50S ribosomal L15
Location	Cmo_Chr04 : 10457252 .. 10460710 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTACGAAGACGGCTGTGTTACTTACTATCTAGCTCATTTGCTTCAGTTCGTACTAAACCCCCACCTGCTTTTGCAATAAACCAAGCAGTATCACGTCCATTCCTAGAGTTCCAGCAAAACCCTAGCCTTGATCGGAGTGTAGGTTTCCCTCTTTCTGGGAATGTCCTTGGTTTTCGAGCTTACAGCCTCTTGAGCTTAAATGATCTGAGAGACAAAGTTCCAAGGAAACAGAAGACGAGAAAGGGTCGTGGTATTGGTTCTGGGAAGGGGAAGACAGCAGGCAGAGGTCACAAGGGTCAAAAAGCGAGAGGTTCTGGGAAGCTAGGGTTTGAAGGGGGTCAAACCCCACTTCGTCGTAGGCTTCCTAAAAGAGGCTTTAAGAATCCTTTCAGCCTCACATTTCAGGTATTTGACTTGTGTTTTCATGTTATTGTTTTGTTGCTTGTGATCCATATTTTAAAATGCCCACTAAGGTGTGCGCCTTGGTGTGCTTAAACCCAAGGCACGACCTATGTGCCTTGCTTCAAAGAAGTGAGTCTCCCTCATTGAAGCCTGTTGGATGATGAAAGTCCCACATCGACTAATTTGGGGAATGATCATGGGTTTATAAGTAAAGGAATACATCTCCATTGGTATGGAGGCCTTTTGGGGAAGCCCAAAGCAAAGCCATGAGAGCTTATGCTCAAAGTGTGGATATCATACCATTGTGGAGAGTCGTTGATTCCTAACATGGTATCAGAGCCATGCCCTAAATTTAGTCGCGCCAATAGATAGGCGAATCCAAATGTCGAACAAAGGGACTCCAGAAGAAAAGGAGTCAAGCCTCCTCGAAGGCAGTAAAAAATGACTAAGACTCCAAAGGAGTCAAGCCTCGATTAAGGGGAGGCGTACTTTGTTCGAGGGGAGGTGTTGGATGATGAAACTCCCACATCGACTAATTTAGGGAATGATCATGGGTTTATAAGTAAAGGAACACATCTTCATTGGTATGAGGCCTTTTGGGGAAGCCCAAAGCAAAGCCATGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGAGTCGTTGATTCCTAACATGGTATCAAAACCATACTCTAAACTTAGTCGTGCTAATAGATAGGTAAATCCTCAAATGTCGAACAAAGGCTCCAGAAGAAAAGGAGTCAAGCCTCCTCGAAGGCAGTAAAAAATGACTAAGACTCCAAAGGAGTCGAGCCTCGATTAAGGGAAGGCGTACTTTGTTCGAGGGGAGGTGTTAGATGATAAAAGTCTCACATTGACTAATTTAGGGAATGATCATGGGTTTATAAGTTAAGGAATACATCTTCATTGGTATGAGGTCTTTTGGGGAAGCCCAAAGCAAAGCCATGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGAGTTGTTGATTCCTAACAAAGCCCACTTGAGGCATGCATCTTAGCACTTGTGTTGTGTGCCTTAACGCCTCAAACTTGATTTCTTTTTTCTAATTTTTAAGGAAGAAATATATTAATATTCTTACATTCTCGAATAAAAGCTCTATTTTCTTTAACTTTGTATCATCTTAATATTCATCATACTGTTTTTCTTCATATCTTAAAGTTTTATTTACATTTTTATTGTACGCCATTAAAAAAAAAAAGTCCATGCTTAAGGTCCCAAAAGACTATTGTGCTCTGGTGCACCTCGAGCTTTAGAAAACATTGCTTGTGATTATTATTTACTTCTCAATTACTTTGTTTTTTTTGGAGGAGTAAGATTAATTTAAAGATGCTCGTTTAACTTTATGCAAATATTGATGCCAAATTGTGTAATGAATTCCATTTTCATCTTGATGATAACAAGTCTTTAATATCGATATCTACTAGTAATTTTATTTCAGTAAAATAGCATGTGATACGAAATTCATGTTGCATGATCTTTAAAAGAGTTACCTTCTGCACTTTGCATTACTTAATGTATAACACAGTTGGTATCTTCTGATGTGAAGCCCCTAACAATATTATTATGTATAGTGCAAAAGACAATTCTTTTTGGGCATGATACTTTTTCCTTTAGTGTTATGATATTTCTTGATTCTTTTGTTTTATGACAGCCAGTTGGATTGGGAAAGATTGCTAAACTTATAAATGCTGGGAAAATTGATTCTTCTCAATTAATCACTATGAAAACACTCAAGGTATCATGACTTGTATCTTGATTAGTCTTATCAAAAGCCTGAAATACTTGTTTTCTTTTTAATATTGTATTTGATTTATTATCCTTACCATTGTGGAATAGGATACTGGTGCAATTGGAAAACAAATACAGGATGGGGTGAGGTTGATGGGACGTGGTGCTGAACAGATTAAGTGGCCAATTCACCTAGAGGTAAATCTTCAACAAAAAAATGCTTCTTTTTTTCCTTTTTCTGTTCTGACGTTGACTTCTAAACCTATATGCTCCTTAGTTAAGCTCATATTTTGTATCAATTACCTATAAATCTGAGGTGTTGTGATGCTGCCAATTTGAAGCTAGTGCACTCTTCTGGACGAAGGTTCTAGTGTTGTCGATGTTCTTCCAGGGTTGCTTCTAGCTGTCTTTCTAGTCTAGGTTGGGATCCAATTGCTTTCAGATTGCCCGTATTTGCTATAACAAAAGGAATATTTCTTCCGTTTATGTAGCTTTGTAGACATTGTTATTTGCTTGTGATTGATGTGCTTAGGCAAGTTTTGTCATAGTTAGAGCTTTCAAGTCTCCCATCTTTAACCATTTGGATTGATCTCAATAGCCTCCGATCTAGCTTCTTCTTGTGCTCGGAACTAATCTTAAATACGTGATGTTTTCAGGTGTCAAGGGTCACTGTTAGGGCGAAGGCAGCGGTGGAAGCTGCCGGAGGGACTGTTAGAAGAGTGTATTACAATAAATTAGGCTTTCGGGCGCTGCTCAAGCCGGAGTGGTTCGAAAAGAAGGGTAGACTGTTACCACGAGCAGCTAGGCCACCCCCAAAGCAGCAAGACAAAGTTGACAGCATTGGCCGCTTGCCTGCGCCCACTAAACCCATCCCTTTTTCGGTTGAAGATGGAGGAGGGGCAGCTTCCAACGTGCCTGCATAGGCAATCATGGTCATTCCCATGAAGGATATTAACTTTCGATTGTCCCTTTGAAATGCATGTTCTCTGGTTGGTGCTTTTTGTAAGCCGGTAACCATTTTGTTTCTACATATTTTTTAAGGTTCAATGATGGACGGCCGCTCTTCACAGACGTTTTCAGGATTCCGGGTGGTAATAGTAATCACCTCATCTTATTAACTATCATGTTCAATAAAGATAATATGTGCTTAACTATTAGATATATACTTAATTTTGTGCCTTCAAAATAAAAATTCAAGGATCTATTTACTATATATATATATATATATATTATTTGAAGGAATACTTTATAAGAATGTGTG

mRNA sequence

ATGCTACGAAGACGGCTGTGTTACTTACTATCTAGCTCATTTGCTTCAGTTCGTACTAAACCCCCACCTGCTTTTGCAATAAACCAAGCAGTATCACGTCCATTCCTAGAGTTCCAGCAAAACCCTAGCCTTGATCGGAGTGTAGGTTTCCCTCTTTCTGGGAATGTCCTTGGTTTTCGAGCTTACAGCCTCTTGAGCTTAAATGATCTGAGAGACAAAGTTCCAAGGAAACAGAAGACGAGAAAGGGTCGTGGTATTGGTTCTGGGAAGGGGAAGACAGCAGGCAGAGGTCACAAGGGTCAAAAAGCGAGAGGTTCTGGGAAGCTAGGGTTTGAAGGGGGTCAAACCCCACTTCGTCGTAGGCTTCCTAAAAGAGGCTTTAAGAATCCTTTCAGCCTCACATTTCAGCCAGTTGGATTGGGAAAGATTGCTAAACTTATAAATGCTGGGAAAATTGATTCTTCTCAATTAATCACTATGAAAACACTCAAGGATACTGGTGCAATTGGAAAACAAATACAGGATGGGGTGAGGTTGATGGGACGTGGTGCTGAACAGATTAAGTGGCCAATTCACCTAGAGGTGTCAAGGGTCACTGTTAGGGCGAAGGCAGCGGTGGAAGCTGCCGGAGGGACTGTTAGAAGAGTGTATTACAATAAATTAGGCTTTCGGGCGCTGCTCAAGCCGGAGTGGTTCGAAAAGAAGGGTAGACTGTTACCACGAGCAGCTAGGCCACCCCCAAAGCAGCAAGACAAAGTTGACAGCATTGGCCGCTTGCCTGCGCCCACTAAACCCATCCCTTTTTCGGTTGAAGATGGAGGAGGGGCAGCTTCCAACGTGCCTGCATAGGCAATCATGGTCATTCCCATGAAGGATATTAACTTTCGATTGTCCCTTTGAAATGCATGTTCTCTGGTTGGTGCTTTTTGTAAGCCGGTAACCATTTTGTTTCTACATATTTTTTAAGGTTCAATGATGGACGGCCGCTCTTCACAGACGTTTTCAGGATTCCGGGTGGTAATAGTAATCACCTCATCTTATTAACTATCATGTTCAATAAAGATAATATGTGCTTAACTATTAGATATATACTTAATTTTGTGCCTTCAAAATAAAAATTCAAGGATCTATTTACTATATATATATATATATATATTATTTGAAGGAATACTTTATAAGAATGTGTG

Coding sequence (CDS)

ATGCTACGAAGACGGCTGTGTTACTTACTATCTAGCTCATTTGCTTCAGTTCGTACTAAACCCCCACCTGCTTTTGCAATAAACCAAGCAGTATCACGTCCATTCCTAGAGTTCCAGCAAAACCCTAGCCTTGATCGGAGTGTAGGTTTCCCTCTTTCTGGGAATGTCCTTGGTTTTCGAGCTTACAGCCTCTTGAGCTTAAATGATCTGAGAGACAAAGTTCCAAGGAAACAGAAGACGAGAAAGGGTCGTGGTATTGGTTCTGGGAAGGGGAAGACAGCAGGCAGAGGTCACAAGGGTCAAAAAGCGAGAGGTTCTGGGAAGCTAGGGTTTGAAGGGGGTCAAACCCCACTTCGTCGTAGGCTTCCTAAAAGAGGCTTTAAGAATCCTTTCAGCCTCACATTTCAGCCAGTTGGATTGGGAAAGATTGCTAAACTTATAAATGCTGGGAAAATTGATTCTTCTCAATTAATCACTATGAAAACACTCAAGGATACTGGTGCAATTGGAAAACAAATACAGGATGGGGTGAGGTTGATGGGACGTGGTGCTGAACAGATTAAGTGGCCAATTCACCTAGAGGTGTCAAGGGTCACTGTTAGGGCGAAGGCAGCGGTGGAAGCTGCCGGAGGGACTGTTAGAAGAGTGTATTACAATAAATTAGGCTTTCGGGCGCTGCTCAAGCCGGAGTGGTTCGAAAAGAAGGGTAGACTGTTACCACGAGCAGCTAGGCCACCCCCAAAGCAGCAAGACAAAGTTGACAGCATTGGCCGCTTGCCTGCGCCCACTAAACCCATCCCTTTTTCGGTTGAAGATGGAGGAGGGGCAGCTTCCAACGTGCCTGCATAG

Homology

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BLAST of CmoCh04G019940 vs. Swiss-Prot
Match: RL15_XANP2 (50S ribosomal protein L15 OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=rplO PE=3 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 3.6e-29
Identity = 80/151 (52.98%), Postives = 101/151 (66.89%), Query Frame = 1


Query: 65  LSLNDLRDKV-PRKQKTRKGRGIGSGKGKTAGRGHKGQKAR-GSGKLGFEGGQTPLRRRL 124
           ++L D+RD    RK++ R GRGIGSGKGKTAGRG KGQKAR G    GFEGGQ PL RRL
Sbjct: 1   MNLEDIRDNPGARKKRMRVGRGIGSGKGKTAGRGVKGQKARTGVAIKGFEGGQMPLHRRL 60

Query: 125 PKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSQLITMKTLKDTGAIGKQIQDGVRLMGR 184
           PKRGF N F L +  V LGKI   + AGK+D+ Q +T   L   G + ++ +DGVR++G 
Sbjct: 61  PKRGFHNIFRLDYNEVSLGKIQAAVEAGKLDAGQPVTEAALVAAGVL-RRAKDGVRVLGT 120

Query: 185 GAEQIKWPIHLEVSRVTVRAKAAVEAAGGTV 214
           G  ++   + LEV+  T  A AAVE AGG+V
Sbjct: 121 G--ELSAKVTLEVAYATKSAVAAVEKAGGSV 148

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BLAST of CmoCh04G019940 vs. Swiss-Prot
Match: RL15_GLUDA (50S ribosomal protein L15 OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) GN=rplO PE=3 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 8.0e-29
Identity = 79/152 (51.97%), Postives = 100/152 (65.79%), Query Frame = 1


Query: 65  LSLNDLRDKV-PRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKL-GFEGGQTPLRRRL 124
           ++LN+LRD    R +K R GRGIGSGKGKT+G+G KGQKAR    L GFEGGQ PL RRL
Sbjct: 1   MNLNELRDNAGSRYRKKRLGRGIGSGKGKTSGKGVKGQKAREGVSLNGFEGGQLPLYRRL 60

Query: 125 PKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSQLITMKTLKDTGAIGKQIQDGVRLMGR 184
           PKRGFKN F   + PV LG + K I  GKID+  ++T   L+  G +G     GVRL+ +
Sbjct: 61  PKRGFKNIFRKEYAPVNLGALDKAIADGKIDAGTVVTEDVLRTAGLVGSGKFAGVRLLAK 120

Query: 185 GAEQIKWPIHLEVSRVTVRAKAAVEAAGGTVR 215
           G  ++   + +EVS  +  A AAVE AGG+VR
Sbjct: 121 G--ELARAVTIEVSGASATAVAAVEKAGGSVR 150

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BLAST of CmoCh04G019940 vs. Swiss-Prot
Match: RL15_BRASO (50S ribosomal protein L15 OS=Bradyrhizobium sp. (strain ORS278) GN=rplO PE=3 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.4e-28
Identity = 76/152 (50.00%), Postives = 107/152 (70.39%), Query Frame = 1


Query: 65  LSLNDLRDKV-PRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKL-GFEGGQTPLRRRL 124
           + L+D+ D    RK++ R GRGIGSGKGKT+GRG KGQ AR   ++ GFEGGQ P+ RRL
Sbjct: 1   MKLSDIADNAGARKKRMRVGRGIGSGKGKTSGRGGKGQTARSGVRIKGFEGGQMPMHRRL 60

Query: 125 PKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSQLITMKTLKDTGAIGKQIQDGVRLMGR 184
           PKRGF N F+L F  + L +I + I+A K+D+  +I  ++L  +GA+ ++ +DGVRL+GR
Sbjct: 61  PKRGFNNIFALDFVEINLDRIQQAIDAKKLDAGSVINAESLVKSGAL-RRSKDGVRLLGR 120

Query: 185 GAEQIKWPIHLEVSRVTVRAKAAVEAAGGTVR 215
           G  ++K  I++EV   +  A AAVE AGGTV+
Sbjct: 121 G--ELKAKINIEVYGASKSAIAAVEKAGGTVK 149

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BLAST of CmoCh04G019940 vs. Swiss-Prot
Match: RL15_RHORT (50S ribosomal protein L15 OS=Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG 4362 / NCIB 8255 / S1) GN=rplO PE=3 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 4.0e-28
Identity = 77/151 (50.99%), Postives = 102/151 (67.55%), Query Frame = 1


Query: 65  LSLNDLRDKV-PRKQKTRKGRGIGSGKGKTAGRGHKGQKAR-GSGKLGFEGGQTPLRRRL 124
           + LN+LRD     K + R GRGIGSGKGKTAGRG KGQK+R G    GFEGGQ P+ RRL
Sbjct: 1   MKLNELRDNPGATKNRIRVGRGIGSGKGKTAGRGVKGQKSREGVSINGFEGGQMPIYRRL 60

Query: 125 PKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSQLITMKTLKDTGAIGKQIQDGVRLMGR 184
           PKRGF NP   +F  V L +I K I+A K+D++ +IT K L + G + ++ QDGVRL+G+
Sbjct: 61  PKRGFNNPTRKSFAVVNLDRIQKAIDAKKLDATAVITEKALIEAGLV-RRSQDGVRLLGK 120

Query: 185 GAEQIKWPIHLEVSRVTVRAKAAVEAAGGTV 214
           G   +K  + +EV+  +  A+  VE AGGT+
Sbjct: 121 GELSVK--VAIEVAGASATAREGVEKAGGTL 148

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BLAST of CmoCh04G019940 vs. Swiss-Prot
Match: RL15_BRASB (50S ribosomal protein L15 OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=rplO PE=3 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 4.0e-28
Identity = 75/152 (49.34%), Postives = 105/152 (69.08%), Query Frame = 1


Query: 65  LSLNDLRDKV-PRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKL-GFEGGQTPLRRRL 124
           + L+D+ D    RK++ R GRGIGSGKGKT+GRG KGQ AR   ++ GFEGGQ P+ RRL
Sbjct: 1   MKLSDIADNAGARKKRMRVGRGIGSGKGKTSGRGGKGQTARSGVRIKGFEGGQMPMHRRL 60

Query: 125 PKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSQLITMKTLKDTGAIGKQIQDGVRLMGR 184
           PKRGF N F+L F  + L +I + I+A K+D+  +I  + L  +GA+ ++ +DGVRL+GR
Sbjct: 61  PKRGFNNIFALDFVEINLDRIQQAIDAKKLDAGSVINAEALVKSGAL-RRAKDGVRLLGR 120

Query: 185 GAEQIKWPIHLEVSRVTVRAKAAVEAAGGTVR 215
           G  +I   +++EV   +  A AAVE AGGTV+
Sbjct: 121 G--EITAKVNIEVHGASKSAIAAVEKAGGTVK 149

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BLAST of CmoCh04G019940 vs. TrEMBL
Match: A0A0A0KP79_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G532450 PE=3 SV=1)

HSP 1 Score: 498.4 bits (1282), Expect = 5.6e-138
Identity = 258/282 (91.49%), Postives = 265/282 (93.97%), Query Frame = 1


Query: 1   MLRRRLCYLLSSSFASVRTKPPPAFAINQAVSRPFLEFQQNPSLDRSVGFPLSGNVLGFR 60
           MLRRRLC LLSSS ASV TKPPPA  INQA+SRPFLEFQQNP LDR VG   SGN+ GFR
Sbjct: 1   MLRRRLCCLLSSSLASVHTKPPPAIVINQALSRPFLEFQQNPFLDRCVGSLPSGNIFGFR 60

Query: 61  AYSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKLGFEGGQTPLRR 120
           A+SLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQ+ARGSGKLGFEGGQTPLRR
Sbjct: 61  AFSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQRARGSGKLGFEGGQTPLRR 120

Query: 121 RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSQLITMKTLKDTGAIGKQIQDGVRLM 180
           RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSS+LITMKTLKDTGAIGKQI+DGVRLM
Sbjct: 121 RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGVRLM 180

Query: 181 GRGAEQIKWPIHLEVSRVTVRAKAAVEAAGGTVRRVYYNKLGFRALLKPEWFEKKGRLLP 240
           GRGAE IKWPIHLEVSRVTVRAK AVEAAGGTVRRVYYNKLG RALLKPEWFEKKGRLLP
Sbjct: 181 GRGAEHIKWPIHLEVSRVTVRAKEAVEAAGGTVRRVYYNKLGLRALLKPEWFEKKGRLLP 240

Query: 241 RAARPPPKQQDKVDSIGRLPAPTKPIPFSV--EDGGGAASNV 281
           RAARPPPKQQDKVDSIGRLPAPTKPIPFSV  EDGG AASN+
Sbjct: 241 RAARPPPKQQDKVDSIGRLPAPTKPIPFSVEYEDGGKAASNL 282

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BLAST of CmoCh04G019940 vs. TrEMBL
Match: M5VMS3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008724mg PE=3 SV=1)

HSP 1 Score: 417.9 bits (1073), Expect = 9.6e-114
Identity = 224/282 (79.43%), Postives = 244/282 (86.52%), Query Frame = 1


Query: 1   MLRRRLCYLLSSSF--ASVRTKPPPAFAINQAVSRPFLEFQQ-NPSLDRSVGFPLSGNVL 60
           MLRRR+  LLS++   +S+RTKP  + +     S  FL+    NPS+  + GF       
Sbjct: 41  MLRRRVTSLLSTTIRSSSIRTKPTLSASPISFQSLHFLQCPNPNPSISNAKGFGFQPE-- 100

Query: 61  GFRAYSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKLGFEGGQTP 120
           G RAYSLLSLNDLR KVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKLGFEGGQTP
Sbjct: 101 GMRAYSLLSLNDLRGKVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKLGFEGGQTP 160

Query: 121 LRRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSQLITMKTLKDTGAIGKQIQDGV 180
           LRRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSS+LITMKTLKDTGAIGKQI+DGV
Sbjct: 161 LRRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIKDGV 220

Query: 181 RLMGRGAEQIKWPIHLEVSRVTVRAKAAVEAAGGTVRRVYYNKLGFRALLKPEWFEKKGR 240
           RLMGRGAEQI+WPIH EVSRVTVRAK AVEAAGG+VRRVYYNKLGFRALLKPEWFEKKGR
Sbjct: 221 RLMGRGAEQIQWPIHFEVSRVTVRAKEAVEAAGGSVRRVYYNKLGFRALLKPEWFEKKGR 280

Query: 241 LLPRAARPPPKQQDKVDSIGRLPAPTKPIPFSVEDGGGAASN 280
           LLP+AARPPPKQ+DKVDSIGRLPAPTKPIPF  E+   ++S+
Sbjct: 281 LLPKAARPPPKQKDKVDSIGRLPAPTKPIPFFTEEEVASSSS 320

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BLAST of CmoCh04G019940 vs. TrEMBL
Match: W9R8K8_9ROSA (50S ribosomal protein L15 OS=Morus notabilis GN=L484_012191 PE=3 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 5.8e-111
Identity = 222/283 (78.45%), Postives = 243/283 (85.87%), Query Frame = 1


Query: 1   MLRRRLCYLLSSS-FASVRTKPPPAFAINQAVSRPFLEFQQ-NPSLDRSVG-FPLSGNVL 60
           MLRRR+C +LSSS F ++  +P P   I Q++   FL+    N  L+   G F L     
Sbjct: 1   MLRRRICSILSSSIFNAITPRPLP---IQQSLR--FLQCPNPNSKLNNGGGEFGLWFGFG 60

Query: 61  GFRAYSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKLGFEGGQTP 120
           GFRAYSLLSLNDLR  VPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKLGFEGGQTP
Sbjct: 61  GFRAYSLLSLNDLRGNVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKLGFEGGQTP 120

Query: 121 LRRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSQLITMKTLKDTGAIGKQIQDGV 180
           LRRR PKRGFKNPFSLTFQPVGLGKIAKLIN GKIDS +LITMKTLKDT AIGKQI+DGV
Sbjct: 121 LRRRFPKRGFKNPFSLTFQPVGLGKIAKLINEGKIDSHELITMKTLKDTEAIGKQIKDGV 180

Query: 181 RLMGRGAEQIKWPIHLEVSRVTVRAKAAVEAAGGTVRRVYYNKLGFRALLKPEWFEKKGR 240
           RLMGRGA+QIKWPIHLEVSRVTVRAKAAVEAAGG+VR+VYYNKLGFRALLKPEWFEKKGR
Sbjct: 181 RLMGRGADQIKWPIHLEVSRVTVRAKAAVEAAGGSVRKVYYNKLGFRALLKPEWFEKKGR 240

Query: 241 LLPRAARPPPKQQDKVDSIGRLPAPTKPIPFSVEDGGGAASNV 281
           LLP+AARPPPKQ+DKVDSIGRLPAPTKPIPF +E+   A+ ++
Sbjct: 241 LLPKAARPPPKQRDKVDSIGRLPAPTKPIPFFIEEKEPASGSL 278

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BLAST of CmoCh04G019940 vs. TrEMBL
Match: A0A061E357_THECC (Ribosomal protein L18e/L15 superfamily protein OS=Theobroma cacao GN=TCM_007684 PE=3 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 2.7e-108
Identity = 213/274 (77.74%), Postives = 232/274 (84.67%), Query Frame = 1


Query: 1   MLRRRLCYLLSSSFASVRTKPPPAFAINQAVSRPFLEFQQNPSLDRSVGFPLSGNVL--G 60
           M+RRRL  ++S+S   ++TKP        +   P L F    SL  S     +G+    G
Sbjct: 1   MIRRRLSPIISASSHFLKTKPI-------SNPSPILHFHSFQSLQCSNPVIKNGSFWFQG 60

Query: 61  FRAYSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKLGFEGGQTPL 120
            RAYSLLSLNDL+DKVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARG+GKLGFEGGQTP+
Sbjct: 61  IRAYSLLSLNDLKDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGNGKLGFEGGQTPM 120

Query: 121 RRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSQLITMKTLKDTGAIGKQIQDGVR 180
           RRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDS +LITMKTLKD GAIGKQI+DGVR
Sbjct: 121 RRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSHELITMKTLKDAGAIGKQIEDGVR 180

Query: 181 LMGRGAEQIKWPIHLEVSRVTVRAKAAVEAAGGTVRRVYYNKLGFRALLKPEWFEKKGRL 240
           LMGRGAEQIKWPIHLEVSRVTVRAK AVEAAGG+VRRV+YNKLG RALLKPEWFEKKGRL
Sbjct: 181 LMGRGAEQIKWPIHLEVSRVTVRAKEAVEAAGGSVRRVHYNKLGLRALLKPEWFEKKGRL 240

Query: 241 LPRAARPPPKQQDKVDSIGRLPAPTKPIPFSVED 273
           LP+ ARPPPK +DKVDSIGRLPAPTKPIPF  E+
Sbjct: 241 LPKPARPPPKLKDKVDSIGRLPAPTKPIPFFTEE 267

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BLAST of CmoCh04G019940 vs. TrEMBL
Match: V4S186_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026233mg PE=3 SV=1)

HSP 1 Score: 394.8 bits (1013), Expect = 8.7e-107
Identity = 215/281 (76.51%), Postives = 236/281 (83.99%), Query Frame = 1


Query: 1   MLRRRLCYLLSSSF----ASVRTKPPPAFAINQAVSRPFLEFQQNPSLDRSVGFPLSGNV 60
           M+RRR+  LLS+S     A VR+ P      ++AV    L+F Q P+   +     S  V
Sbjct: 1   MIRRRVSSLLSTSILNNIAVVRSIPT---LNHRAVPFQSLQFAQCPNSTPNEQIS-SQFV 60

Query: 61  LGFRAYSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKLGFEGGQT 120
           +G R++SLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARG+ K GFEGGQT
Sbjct: 61  MGIRSFSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGTMKFGFEGGQT 120

Query: 121 PLRRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSQLITMKTLKDTGAIGKQIQDG 180
           P+RRRLPKRGFKNPFSLTFQPVGLGKIA LINAGKIDS +LITMKTLKD GAIGKQI+DG
Sbjct: 121 PMRRRLPKRGFKNPFSLTFQPVGLGKIAYLINAGKIDSHELITMKTLKDAGAIGKQIEDG 180

Query: 181 VRLMGRGAEQIKWPIHLEVSRVTVRAKAAVEAAGGTVRRVYYNKLGFRALLKPEWFEKKG 240
           VRLMGRGAE+IKWPIHLE SRVTVRAKAAVEAAGG+VRRV+YNKLG RALLKPEWFEKKG
Sbjct: 181 VRLMGRGAEKIKWPIHLEASRVTVRAKAAVEAAGGSVRRVHYNKLGLRALLKPEWFEKKG 240

Query: 241 RLLPRAARPPPKQQDKVDSIGRLPAPTKPIPFSVEDGGGAA 278
           RLLPR ARPPPK QDKVDSIGRLPAPTKPIPF  E+G  A+
Sbjct: 241 RLLPRPARPPPKLQDKVDSIGRLPAPTKPIPFFSEEGAAAS 277

[Close]

BLAST of CmoCh04G019940 vs. TAIR10
Match: AT5G64670.1 (AT5G64670.1 Ribosomal protein L18e/L15 superfamily protein)

HSP 1 Score: 380.9 bits (977), Expect = 6.6e-106
Identity = 207/277 (74.73%), Postives = 223/277 (80.51%), Query Frame = 1


Query: 1   MLRRRLCYLLSSSF--ASVRTKPPPAFAINQAVSRPFLEFQQNP-------SLDRSVGFP 60
           MLRRRL  ++S+S   +S      P F I    S P L+ + +P       S  R++ F 
Sbjct: 1   MLRRRLLSIISTSLINSSFHQTAKPRFII----SSPLLQCRPSPISTQIPTSTSRALSFQ 60

Query: 61  LSGNVLGFRAYSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKLGF 120
                 G RAYSLLSLNDLRD VPRK KTRKGRGIGSGKGKTAGRGHKGQKARG+ K GF
Sbjct: 61  ------GIRAYSLLSLNDLRDNVPRKLKTRKGRGIGSGKGKTAGRGHKGQKARGTMKFGF 120

Query: 121 EGGQTPLRRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSQLITMKTLKDTGAIGK 180
           EGGQTPLRRRLPKRGFKN F L FQPVGLGKIAKLINAGKIDS +LITMKTLKD GAIGK
Sbjct: 121 EGGQTPLRRRLPKRGFKNKFKLHFQPVGLGKIAKLINAGKIDSHELITMKTLKDVGAIGK 180

Query: 181 QIQDGVRLMGRGAEQIKWPIHLEVSRVTVRAKAAVEAAGGTVRRVYYNKLGFRALLKPEW 240
           QI+DGVRLMGRGA+ IKWP+H EVSRVTVRAK  VEAAGG+VRRVYYNKLG RALLKPEW
Sbjct: 181 QIEDGVRLMGRGADDIKWPLHFEVSRVTVRAKEVVEAAGGSVRRVYYNKLGLRALLKPEW 240

Query: 241 FEKKGRLLPRAARPPPKQQDKVDSIGRLPAPTKPIPF 269
           FEKKGRLLP+AARPPPKQQDKVDSIGRLPAP KPIPF
Sbjct: 241 FEKKGRLLPKAARPPPKQQDKVDSIGRLPAPKKPIPF 267

[Close]

BLAST of CmoCh04G019940 vs. TAIR10
Match: AT3G25920.1 (AT3G25920.1 ribosomal protein L15)

HSP 1 Score: 58.2 bits (139), Expect = 9.8e-09
Identity = 61/188 (32.45%), Postives = 94/188 (50.00%), Query Frame = 1


Query: 76  RKQKTRKGRGIGSGKGKTAGRGHKGQKAR-GSGKL-GFEGGQTPLRRRLPK-RGFKNPFS 135
           RK++ RKGRGI +G+G + G G +GQK+R G G + GFEGGQT L RRLPK RG      
Sbjct: 93  RKKQKRKGRGISAGQGASCGFGMRGQKSRSGPGIMRGFEGGQTALYRRLPKLRGIAGGMR 152

Query: 136 LTFQPVGLGKIAKLINAGKIDSSQLITMKTLKDTGAI---GKQIQDGVRLMGRGAEQIKW 195
            +  P  L    K I          ++++TLK  G I   G++ +  ++++G G  ++  
Sbjct: 153 -SGLPKYLPVNIKDIETAGFQEGDEVSLETLKQKGLINPSGRERKLPLKILGTG--ELSM 212

Query: 196 PIHLEVSRVTVRAKAAVEAAGGTVRRVYYNKLGFRALLKP----------EWFEKKGRLL 248
            +  +    + +AK  +EA+G T+  +     G +  +KP          E+F KK    
Sbjct: 213 KLTFKARAFSTQAKEKLEASGCTLTVL----PGRKKWVKPSVAKNQARADEYFAKKRAAA 272

[Close]

BLAST of CmoCh04G019940 vs. NCBI nr
Match: gi|659121261|ref|XP_008460571.1| (PREDICTED: 54S ribosomal protein L10, mitochondrial [Cucumis melo])

HSP 1 Score: 505.0 bits (1299), Expect = 8.6e-140
Identity = 259/282 (91.84%), Postives = 267/282 (94.68%), Query Frame = 1


Query: 1   MLRRRLCYLLSSSFASVRTKPPPAFAINQAVSRPFLEFQQNPSLDRSVGFPLSGNVLGFR 60
           MLRR+LCYLLSSS ASVRTKPPPA  INQA+  PFLEFQQNP LDR VG PLSGN+ GFR
Sbjct: 1   MLRRQLCYLLSSSLASVRTKPPPAIVINQALLHPFLEFQQNPCLDRCVGSPLSGNIFGFR 60

Query: 61  AYSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKLGFEGGQTPLRR 120
           A+SLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQ+ARGSGKLGFEGGQTPLRR
Sbjct: 61  AFSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQRARGSGKLGFEGGQTPLRR 120

Query: 121 RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSQLITMKTLKDTGAIGKQIQDGVRLM 180
           RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSS+LITMKTLKDTGAIGKQI+DGVRLM
Sbjct: 121 RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGVRLM 180

Query: 181 GRGAEQIKWPIHLEVSRVTVRAKAAVEAAGGTVRRVYYNKLGFRALLKPEWFEKKGRLLP 240
           GRGAE IKWPIHLEVSRVTVRAK AVEAAGGTVRRVYYNKLG RALLKPEWFEKKGRLLP
Sbjct: 181 GRGAEHIKWPIHLEVSRVTVRAKEAVEAAGGTVRRVYYNKLGLRALLKPEWFEKKGRLLP 240

Query: 241 RAARPPPKQQDKVDSIGRLPAPTKPIPFSV--EDGGGAASNV 281
           RAARPPPKQQDKVDSIGRLPAPTKPIPFSV  EDGG AASN+
Sbjct: 241 RAARPPPKQQDKVDSIGRLPAPTKPIPFSVEYEDGGKAASNL 282

[Close]

BLAST of CmoCh04G019940 vs. NCBI nr
Match: gi|449450123|ref|XP_004142813.1| (PREDICTED: 54S ribosomal protein L10, mitochondrial [Cucumis sativus])

HSP 1 Score: 498.4 bits (1282), Expect = 8.0e-138
Identity = 258/282 (91.49%), Postives = 265/282 (93.97%), Query Frame = 1


Query: 1   MLRRRLCYLLSSSFASVRTKPPPAFAINQAVSRPFLEFQQNPSLDRSVGFPLSGNVLGFR 60
           MLRRRLC LLSSS ASV TKPPPA  INQA+SRPFLEFQQNP LDR VG   SGN+ GFR
Sbjct: 1   MLRRRLCCLLSSSLASVHTKPPPAIVINQALSRPFLEFQQNPFLDRCVGSLPSGNIFGFR 60

Query: 61  AYSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKLGFEGGQTPLRR 120
           A+SLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQ+ARGSGKLGFEGGQTPLRR
Sbjct: 61  AFSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQRARGSGKLGFEGGQTPLRR 120

Query: 121 RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSQLITMKTLKDTGAIGKQIQDGVRLM 180
           RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSS+LITMKTLKDTGAIGKQI+DGVRLM
Sbjct: 121 RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGVRLM 180

Query: 181 GRGAEQIKWPIHLEVSRVTVRAKAAVEAAGGTVRRVYYNKLGFRALLKPEWFEKKGRLLP 240
           GRGAE IKWPIHLEVSRVTVRAK AVEAAGGTVRRVYYNKLG RALLKPEWFEKKGRLLP
Sbjct: 181 GRGAEHIKWPIHLEVSRVTVRAKEAVEAAGGTVRRVYYNKLGLRALLKPEWFEKKGRLLP 240

Query: 241 RAARPPPKQQDKVDSIGRLPAPTKPIPFSV--EDGGGAASNV 281
           RAARPPPKQQDKVDSIGRLPAPTKPIPFSV  EDGG AASN+
Sbjct: 241 RAARPPPKQQDKVDSIGRLPAPTKPIPFSVEYEDGGKAASNL 282

[Close]

BLAST of CmoCh04G019940 vs. NCBI nr
Match: gi|657993764|ref|XP_008389179.1| (PREDICTED: 54S ribosomal protein L10, mitochondrial-like [Malus domestica])

HSP 1 Score: 420.2 bits (1079), Expect = 2.8e-114
Identity = 225/278 (80.94%), Postives = 236/278 (84.89%), Query Frame = 1


Query: 1   MLRRRLCYLLSSSF--ASVRTKPPPAFAINQAVSRPFLEF----QQNPSLDRSVGFPLSG 60
           MLRRRL  LLS++   +S+RTKPP        +    L F      NPS     GF   G
Sbjct: 1   MLRRRLPSLLSTTIFTSSIRTKPPFTLPTPSPIPSQSLHFLPCLNPNPSFSNGKGFGFQG 60

Query: 61  NVLGFRAYSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKLGFEGG 120
                RAYSLLSLNDLR KVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKLGFEGG
Sbjct: 61  ----VRAYSLLSLNDLRGKVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKLGFEGG 120

Query: 121 QTPLRRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSQLITMKTLKDTGAIGKQIQ 180
           QTPLRRRLPKRGF NPFSLTFQPVGLGKIA LINAGKIDSS+LITMKTLKDTGAIGKQI+
Sbjct: 121 QTPLRRRLPKRGFNNPFSLTFQPVGLGKIATLINAGKIDSSELITMKTLKDTGAIGKQIK 180

Query: 181 DGVRLMGRGAEQIKWPIHLEVSRVTVRAKAAVEAAGGTVRRVYYNKLGFRALLKPEWFEK 240
           DGVRLMGRGAEQI+WPIHLEVSRVTVRAK AVEAAGG+VRRVYYNKLGFRALLKPEWFEK
Sbjct: 181 DGVRLMGRGAEQIQWPIHLEVSRVTVRAKEAVEAAGGSVRRVYYNKLGFRALLKPEWFEK 240

Query: 241 KGRLLPRAARPPPKQQDKVDSIGRLPAPTKPIPFSVED 273
           KGRLLP+AARPPPKQ+DKVDSIGRLPAPTKPIPFS ED
Sbjct: 241 KGRLLPKAARPPPKQKDKVDSIGRLPAPTKPIPFSTED 274

[Close]

BLAST of CmoCh04G019940 vs. NCBI nr
Match: gi|694421823|ref|XP_009338744.1| (PREDICTED: 54S ribosomal protein L10, mitochondrial [Pyrus x bretschneideri])

HSP 1 Score: 418.7 bits (1075), Expect = 8.1e-114
Identity = 223/278 (80.22%), Postives = 237/278 (85.25%), Query Frame = 1


Query: 1   MLRRRLCYLLSSSF--ASVRTKPPPAFAINQAVSRPFLEF----QQNPSLDRSVGFPLSG 60
           MLRRRL  LLS++   +S+RTKPP     +  +    L F      NPS +   GF   G
Sbjct: 1   MLRRRLPSLLSTTIFTSSIRTKPPLTLPTHSPIPSQSLHFLPCLNPNPSFNNDKGFGFQG 60

Query: 61  NVLGFRAYSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKLGFEGG 120
                RAYSLLSLNDLR KVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKLGFEGG
Sbjct: 61  ----VRAYSLLSLNDLRGKVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKLGFEGG 120

Query: 121 QTPLRRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSQLITMKTLKDTGAIGKQIQ 180
           QTPLRRRLPKRGF NPFSLTFQPVGLGKIA LINAGKIDSS+LITMKTLKDTGAIGKQI+
Sbjct: 121 QTPLRRRLPKRGFNNPFSLTFQPVGLGKIATLINAGKIDSSELITMKTLKDTGAIGKQIK 180

Query: 181 DGVRLMGRGAEQIKWPIHLEVSRVTVRAKAAVEAAGGTVRRVYYNKLGFRALLKPEWFEK 240
           DGVRLMGRGAEQI+WPIHLEVSRVTVRA+ AVEAAGG+VRRVYYNKLGFRALLKPEWFEK
Sbjct: 181 DGVRLMGRGAEQIQWPIHLEVSRVTVRAREAVEAAGGSVRRVYYNKLGFRALLKPEWFEK 240

Query: 241 KGRLLPRAARPPPKQQDKVDSIGRLPAPTKPIPFSVED 273
           KGRLLP+AARPPPKQ+DKVDSIGRLPAPTKPIPF  ED
Sbjct: 241 KGRLLPKAARPPPKQKDKVDSIGRLPAPTKPIPFLTED 274

[Close]

BLAST of CmoCh04G019940 vs. NCBI nr
Match: gi|595797630|ref|XP_007201295.1| (hypothetical protein PRUPE_ppa008724mg [Prunus persica])

HSP 1 Score: 417.9 bits (1073), Expect = 1.4e-113
Identity = 224/282 (79.43%), Postives = 244/282 (86.52%), Query Frame = 1


Query: 1   MLRRRLCYLLSSSF--ASVRTKPPPAFAINQAVSRPFLEFQQ-NPSLDRSVGFPLSGNVL 60
           MLRRR+  LLS++   +S+RTKP  + +     S  FL+    NPS+  + GF       
Sbjct: 41  MLRRRVTSLLSTTIRSSSIRTKPTLSASPISFQSLHFLQCPNPNPSISNAKGFGFQPE-- 100

Query: 61  GFRAYSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKLGFEGGQTP 120
           G RAYSLLSLNDLR KVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKLGFEGGQTP
Sbjct: 101 GMRAYSLLSLNDLRGKVPRKQKTRKGRGIGSGKGKTAGRGHKGQKARGSGKLGFEGGQTP 160

Query: 121 LRRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSQLITMKTLKDTGAIGKQIQDGV 180
           LRRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSS+LITMKTLKDTGAIGKQI+DGV
Sbjct: 161 LRRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIKDGV 220

Query: 181 RLMGRGAEQIKWPIHLEVSRVTVRAKAAVEAAGGTVRRVYYNKLGFRALLKPEWFEKKGR 240
           RLMGRGAEQI+WPIH EVSRVTVRAK AVEAAGG+VRRVYYNKLGFRALLKPEWFEKKGR
Sbjct: 221 RLMGRGAEQIQWPIHFEVSRVTVRAKEAVEAAGGSVRRVYYNKLGFRALLKPEWFEKKGR 280

Query: 241 LLPRAARPPPKQQDKVDSIGRLPAPTKPIPFSVEDGGGAASN 280
           LLP+AARPPPKQ+DKVDSIGRLPAPTKPIPF  E+   ++S+
Sbjct: 281 LLPKAARPPPKQKDKVDSIGRLPAPTKPIPFFTEEEVASSSS 320

The following BLAST results are available for this feature:

BLAST of CmoCh04G019940 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RL15_XANP2	3.6e-29	52.98	50S ribosomal protein L15 OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / ...	[more]
RL15_GLUDA	8.0e-29	51.97	50S ribosomal protein L15 OS=Gluconacetobacter diazotrophicus (strain ATCC 49037...	[more]
RL15_BRASO	1.4e-28	50.00	50S ribosomal protein L15 OS=Bradyrhizobium sp. (strain ORS278) GN=rplO PE=3 SV=...	[more]
RL15_RHORT	4.0e-28	50.99	50S ribosomal protein L15 OS=Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1....	[more]
RL15_BRASB	4.0e-28	49.34	50S ribosomal protein L15 OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) G...	[more]

BLAST of CmoCh04G019940 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KP79_CUCSA	5.6e-138	91.49	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G532450 PE=3 SV=1	[more]
M5VMS3_PRUPE	9.6e-114	79.43	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008724mg PE=3 SV=1	[more]
W9R8K8_9ROSA	5.8e-111	78.45	50S ribosomal protein L15 OS=Morus notabilis GN=L484_012191 PE=3 SV=1	[more]
A0A061E357_THECC	2.7e-108	77.74	Ribosomal protein L18e/L15 superfamily protein OS=Theobroma cacao GN=TCM_007684 ...	[more]
V4S186_9ROSI	8.7e-107	76.51	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026233mg PE=3 SV=1	[more]

BLAST of CmoCh04G019940 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G64670.1	6.6e-106	74.73	Ribosomal protein L18e/L15 superfamily protein	[more]
AT3G25920.1	9.8e-09	32.45	ribosomal protein L15	[more]

BLAST of CmoCh04G019940 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659121261\|ref\|XP_008460571.1\|	8.6e-140	91.84	PREDICTED: 54S ribosomal protein L10, mitochondrial [Cucumis melo]	[more]
gi\|449450123\|ref\|XP_004142813.1\|	8.0e-138	91.49	PREDICTED: 54S ribosomal protein L10, mitochondrial [Cucumis sativus]	[more]
gi\|657993764\|ref\|XP_008389179.1\|	2.8e-114	80.94	PREDICTED: 54S ribosomal protein L10, mitochondrial-like [Malus domestica]	[more]
gi\|694421823\|ref\|XP_009338744.1\|	8.1e-114	80.22	PREDICTED: 54S ribosomal protein L10, mitochondrial [Pyrus x bretschneideri]	[more]
gi\|595797630\|ref\|XP_007201295.1\|	1.4e-113	79.43	hypothetical protein PRUPE_ppa008724mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005749	Ribosomal_L15_bac-type
IPR021131	Ribosomal_L18e/L15P

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **Cellular Component**
Term	Definition
GO:0015934	large ribosomal subunit

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006412	translation
cellular_component	GO:0015934	large ribosomal subunit
molecular_function	GO:0003735	structural constituent of ribosome

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G019940.1	CmoCh04G019940.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005749	Ribosomal protein L15, bacterial-type	PANTHER	PTHR12934	50S RIBOSOMAL PROTEIN L15	coord: 59..271 score: 8.5E
IPR005749	Ribosomal protein L15, bacterial-type	TIGRFAMs	TIGR01071	TIGR01071	coord: 67..213 score: 1.9
IPR021131	Ribosomal protein L18e/L15P	PFAM	PF00828	Ribosomal_L27A	coord: 90..213 score: 7.1
IPR021131	Ribosomal protein L18e/L15P	unknown	SSF52080	Ribosomal proteins L15p and L18e	coord: 75..213 score: 1.03
None	No IPR available	GENE3D	G3DSA:3.100.10.10		coord: 95..214 score: 2.4
None	No IPR available	PANTHER	PTHR12934:SF12	39S RIBOSOMAL PROTEIN L15, MITOCHONDRIAL	coord: 59..271 score: 8.5E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G019940	Cucsa.011740	Cucumber (Gy14) v1	cgycmoB0546
CmoCh04G019940	CmaCh04G018900	Cucurbita maxima (Rimu)	cmacmoB728
CmoCh04G019940	Cla001875	Watermelon (97103) v1	cmowmB738
CmoCh04G019940	Csa5G532450	Cucumber (Chinese Long) v2	cmocuB752
CmoCh04G019940	MELO3C022914	Melon (DHL92) v3.5.1	cmomeB639
CmoCh04G019940	CSPI05G18790	Wild cucumber (PI 183967)	cmocpiB764
CmoCh04G019940	Lsi11G001070	Bottle gourd (USVL1VR-Ls)	cmolsiB623
CmoCh04G019940	Cp4.1LG01g17050	Cucurbita pepo (Zucchini)	cmocpeB677
CmoCh04G019940	MELO3C022914.2	Melon (DHL92) v3.6.1	cmomedB723
CmoCh04G019940	CsaV3_5G027610	Cucumber (Chinese Long) v3	cmocucB0892
CmoCh04G019940	Cla97C11G206400	Watermelon (97103) v2	cmowmbB699
CmoCh04G019940	Bhi07G000062	Wax gourd	cmowgoB0914
CmoCh04G019940	CsGy5G018320	Cucumber (Gy14) v2	cgybcmoB669
CmoCh04G019940	Carg26169	Silver-seed gourd	carcmoB0392

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G019940	Cucumber (Gy14) v1	cgycmoB0522
CmoCh04G019940	Wild cucumber (PI 183967)	cmocpiB754
CmoCh04G019940	Cucumber (Chinese Long) v2	cmocuB745
CmoCh04G019940	Watermelon (Charleston Gray)	cmowcgB623
CmoCh04G019940	Watermelon (Charleston Gray)	cmowcgB629
CmoCh04G019940	Watermelon (97103) v1	cmowmB733
CmoCh04G019940	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G019940	Cucumber (Gy14) v2	cgybcmoB665
CmoCh04G019940	Cucumber (Chinese Long) v3	cmocucB0895
CmoCh04G019940	Watermelon (97103) v2	cmowmbB706
CmoCh04G019940	Wax gourd	cmowgoB0873
CmoCh04G019940	Wax gourd	cmowgoB0906