CsaV3_5G027610 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_5G027610
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	50S ribosomal protein L15
Location	chr5 : 22623038 .. 22640137 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTAATGTATATATTTTAAGTTTGAGATTATTATTATTTTTTTTGTAAAGTTTAAAAGAATTCAAAGGTAATTAAGGTAAAATGGAAAGTTGAGGTGTACATTTTTATAATTTAGGGTGATAATAATAATCAGAATTAACCCTGATTCCCTCCTTACACCTCTACTCCACTTTCTCCGTCTTCCTTCCACCCTCTTCAGCCGCACAGTCACTCCATTTCTTCTTCTTTTTCCTTCCACCAGCGGCGTTTGTCGAGCGGCGCAACCCACGACCCGTCTTTGTTCAGCCTTGGCTGCACGAGCTCTACTTCTATGGTGGCAACGTCCGCTCACAGCAACTACACTCCCACGACCAGCTTTAATTGCCCGGCTCCGCCATCCCTAACAGTAACTGGCTGAATACCAATTTTCTGCAGCAACCCATTTCTTTATTGACATCGATTCGGTTTGCTCGTACTTCCCAGGGATCACATTTGTAATTTTTAACTCCATCACGTTCCAGCAAAGATTCGAGTCCTTTTGGTAAATTTTCTTGGTTAATTTGCTCTAATTTCTTTGGGATTGAATTTAAAATTCGATTCTTATGCTTGTAGCTCTTCTGTTTTAGTTTCTCGACCCGAGTTTTTTTTTTGGGGGGTTAGATTTGGTTGTAAGTGTAACGGTTCTTTGTAACTCATTCCAACTCAGATGAAATGATTTAGATTAATATCTAATCCTTCGGAACTTTTAGTTGTAGATTCAGACTTATTTGGAGTTTTCAACCTAAGATAGTTAGGTTTAGGGTCGTCTTTATGTAAGAGCGCCCCAGATGAATACTCTTTCAGATTCGAGTAAGGATTTTTAACTTCATTTAAAACTGTTATGTATTTTCCTTTTTATTTAGGTCTCTTTTGGACTAATTTAGGAGCAGTGTAGGCAAGTAGAGTTTTAATTGTTGGGTCTATATGTTGTTTTCTATGATGCTGTGCTTTATTTGTGCTATAGGGCTATATTTCTTATTTATGATGTAAATGCTTGATGCTTTTATGCCTTATGTGCTTTGGATGTTTAAGCTTTCAGGAATGATGCAATTTTGTTGTGACCACTTACGTGCTGGGAAGTGGTTGCATGATCTTAAGTTTATAAGCTTGTGTTACTGTTGAAAATGTCTGATTCATATGATTTCTGTTGGGGGCATACTATTGTTTTATGTAGTTTTGACCTAGAGAAGGGCTAGAAGCATGTTGTAGGACTCATACGTTTGAATGAGATTGTGTGAGAAAACAGTCCTGAATAATTCATGCCTTTATAAAGGGTAGACGGTGCATATTGGTGTGCCTTGGGTAAAACTGGTCAAGGGTGATATGTCATCGTTGAAATAAGAGGTTCATTGTGCCTTGAAAAAGAGGTACAATATGTTGCTTAGTCATTGAGACATTGTATAAAATGATCAAGGATCGAACTCCGAGCATTGTAGAGATCATTGAGGCCCAAGGTAGATATGGTAAGGGGTTGACACTTGTTGACGGAGTAAGTCTGAGAGAGCTTTGGATGGGACTAAAGACGAGCTCATGAGGCTTGTGTAGAGATTGATTGTGCATTATGTTATGTGTTCATTCATGTCTTTGGCATGTTGGAATGATTATGTACTTTTCAATGAGGAGCAAATGCAATGGTTGTGAATAGAATAATTTTTAGCTTGTATGCTATTTGGTGGCTCCTCAAGTGTGAGCTGCTTACTTAGTAGGCATTACTGAGCCACTAACAAATTTTGTAGGTGATGATGACTTTTACTCAACACGTGTTATGTACTAATCCACAAAAAGTTTAATTAATTGTTTGTTCATTCGTCATATATTGTTCAACCCATCAATGCAGGGAAAAGAGATTGTTAATTTTATTATATTCTTTAGATCCATCCCCAAGGTTTGCATTTTCTGTTTAATGTTTGATTTGCCTTATCTTTGATTTACCAAAATGTACCTATGATTGAGGGTTGAGGCATTGTATTCATATTGTCTATTTTCATTACATAACTTTATCTTTTTCTAAAAAAGAAAGTAGAAAAACTCTACATATCCTCACGTTCTTGTGCTATAACAGTGGAATCATATTTTGAATTAGGTAGGTGATTTTATTAAGTATTATTTTTTTTCACTAGTATGTGAAGAAAATACCTATTTTATATTACATATATGATAGACCACCAATTATTTTACAATATAGTAGGAGGAAAAAGGGGGCAGTTGCACGTGAACAAGAGACGGAAAATGGAGAAAGAAGTGAAACCACCTTGGTGGGAACCATGGTTAGTTACATAAGAGGGAGTTAAAAGGGAAAGAAGGAAGGGAAGAGAGGGGTGGTTAGTCAGTTTCTAGAAGTGGAGGCCTGTAATCTCCTGGAGAGCAGGGAATGCAGACAGTCTTCAGTTTCTGTAGTCTGTAGCAAGTTATTTCCATTATCGTGAAGTACTTTACTGTTTTGATGTTTTATGTTGAACTTGGTTTATTTTTGTATTAGTTCTTGTGTTGTACTTTGTTTTCAAGACTGTGTTAGTACCATTTTCTGTTAAAGTTCGGCTGATTAATAAATTAATTGAACACACTACTTGGTGTTCTATCATTTTGGTATCAGAGAATTTGAATCTGTGAAGTTCTATTTCATGGCTCAAAAGTGAATTGAGGAAAAGTTGGAAATGGTAGATCAAGAAATATCTGGCATTCGAGCAGAATTACATGATCTGCCAACAATCAAGGAAAACATGTCATCTTTGGCGAGGAGTATTGAGAGTTAGGAGTATAGGCTGAGAAGCAACAACAAACATTGTTGAAATATATTGAGGGGATGATCAAAGGGAAGACAACGATGGAAGAAGTACGAGAAGGATCATCAAGTAAAATTGACAGCATGGTTGATGTCAGTGATTCGACGATGATGGGAGGAAAATCTGAGGAAAAACATACCAAGTTGGAGGGTGAAGATTCTACAGGCTATCGAAGCAAATTTAAAAAAATTGAAATGCCAATTTTTGAGGGAAATGATCTTGATTTTTGGTTGTTTAGGGCTGAGAGATACTTTCAGATACACAAACTGAGTGAGAAAAAAAATGACTGTGTCCATTATTAGTTTTGATGGAGCAACTTTGGATTGGTATAGATCTCATGAAGATCGTGAATCGTTTGTTAATTGGGACGATTTAAAGAAGAGACTTATTGTTCGATTTTGATCAGGTCGTGAGGGATCAAATCTGGATAGATTTTTAAAGATCAAGTAAGAAACTACAGTGGAAGAATATCAGAATGTATTTGTTAAATTAGTAGCACCATTGCCTTTTCTACAAAAGGCTGTCTTAGAAGAGACATTTATGAATGGTTTGAAACATGGATTAAGGCAGATATGGAATGTTGGGAACCTATGGGACTTGCTCAAATGATGAAGTTGGCCCAAAAGATTGAGAACCGAGAAGTGATAAGGGGAGAATCAAGTTCCAAACGTGCAGCGGATGGGAAATTCCAGGCTTCTGCTTCTTTTAAACCTCAAATTCCTGTGATTTCTAATGATAATAAGTCAGGAGGGACTGTTCCAATGCGGACGATTACACTTCGTGGAGTGGCTGGTGAACCTAATCGACGAGAAGGACCACTAAAATGACTTTCTGATGCTGAATTTCAGGCTAGACGTGAGAAAGGTCTCTGTTTTCGTTGCGAGGAAAGATTTTTTGTGGGCCATAAGTGTAAAGTGAAAGATCATAAGGAACTTAGAGTCTTAGTTGTTGGGGTAAATGGGGAAGAACCAGAAGTAGTTGAAGAAGAGGATTCAAAAGTGGAAACTGAGATACAGGAGACTGAAGTTGTTAAGCAAGAAGAACCCGTGATTGAATTGTCAATAAATTTGGTGGTGGGATTAACAAACCCTGGAACTATGAAAATTAAAGGTATGATTCGAGAAAGATCAGTAGTAGTATTGATAGATTGCGGCACGACCCATAGTTTTATATCTGAAAAATTAGTAACTCAATTGTTGTTGCCGTTGGAGGAAACTTCTCATTATGGGGTTATTATGGGTTCTGGATCTGCGGTAAAAGGGAAGGGAATTTGTAAACAAGTGGAACTGCTATTGGGTGAATGGAAGGTTGTGGATAATTTTTTGCCATTAGAATTGGGGGGAGTGGATGTAATTCTTGGTATGCAATGGCTACATACATTAGGAGTAACTGAAGTGGATTGGCGAAAACTTACTTTGACATTCATACAAAATGGGAAGAAGGTTGTATTGAGGGGAGATCCGAGTCGTACGAAGGCTAGGGTGAGTTTGAAGCACATGATGAAGACATGGACAGAACTTGATCAGGGATTTCTGATTGAGTGTAGATCTTTGGAAGGTGGAATGGCATTTGCAGCGATGTATGGGATTGATGAAGTGCCTACCACTCATGAGTCTATTCCTAGCCGTGTTAGCTAAGTATGAAGATGTTTTTGATTGGCCTGGAGAGTTGCCACCACAACGTACCATTGAACATCATATACATCTTAAGAAGGGAACTAATCCAGTCAATGTCCGGCCTTTAGATATGCATACCAATAAAAGGAGGAGATGGAAAGATTGGTTGATGAAATGATGGCATCTGGCATAATTAAACCTAGTACTAGTCCATATTCGAGCCCGATCTTGTTGGTGAAAAAAAAATGGTAGTTGGCGGTTTTGAGTAGATTACCGTGCGTTGAATAGTGTGACCGTTCCAGACAAGTTTCCTATTCCAGTAATAGAGGAATTGTTTGATGAACTTAACGAGGCTAATATATTTACGAAGATTGATCTCAAGGTGGGATATCATCATATTAGAATGTGTAAAGAGAATGTGGAGAAAACAACTTTTAGAACTCACGAGGGGCATTATGAGTTCCTTGTCATGCCTTTTGGGCTCACCAATGCACCATCAACGTTTCAAGCTTTGATGAATAGTATCTTTATAAACCTTACCTACGCAGGTTTGTCTTAGTCTTTTTTGATGATATTTTAATTTACAGTAGAAGTTTGGATGAATAGCTTCAACATTTAGAATGGGTGTTAGAGGTGTTGCGAGAGAATTATATGCTAATATGCATAAGTGTGGGTTTGCCAAAACGAAAGTTGAGTATCTTGGCCATATAATTCTGGGCAAGGGTGTAGAAGTTGATCCGAGAAAATTAGATCTATCAAAAATGGCCCGTGCCCACTAATGTCCGCGAAGTTCGTGGATTTCTTGGGTTGACAGGATAATGTCGATGATTTGAAATGAATTATGGAAGTGTGGCTGCTCCTTTGACTCAATTATTGAAGAAAGGAGCTTATCAATGGACTGTTGCAGCTGCTGATTCTTTTGAGAATTTAAAGATGGCTATGATGACTCTGCCAATCTTAGCACTGCCAGATTTTTCCATGCCATTTGAAATAGAGACTGATGCTTCTAGATATGGGGTAGGTGCTGTCTTAATTCAAAATCATCGGCCAAATGCTTATTTTAGCCAGACATTAGCTATGAGGGATCATGCTAAACCAGTTTATGAACGGGAATTAATGGTTGTAGTTTTGGACCTTTTGGTTGTGCAACGTTGGAGACCTTATCTTTTGGGCAGGAGGTTTGTAGTGAAAACTGATTAACGATCATTGAAGTTTTTATTGGAACAAAGGGTTATCCAACCTCAACATCAGAGGTGGATTGCTAAGCTTCTTGGCTACAATTTTGATGTCGTGTATACACCGGGACTACAAAACAAAGCAACAGATGCCTTGTCTCGTGTTCCTCCTACTACCTAACTTAATCAACTTACTGTTTCATCATTGTTGGATTTATCCATTCTTAAAACAGAGGTAGATAGAGATGAGAAGTTGAAGGAAATTGTGGACAAGCTTGAGAAGGGAGACGATGTTACAAAATTTACTATGCCGCATGGTGTGCTAAGGTATAAAGGGCGATTGGTCATTTCCAGAAATTCAGTCTTATTGCCTACAATTCTTCATACTTATCATGATTCAGTGTTTGGTTGGCATTCGGGCTATTTATGGACTTATAAAAGGTTGATAGGTGAGTTGTATTGGGAAGGTATGAAGGCTGATGTACAGAAATACTGTGATGAGTGTATGACCTGTCAACGCAACAAAACACTGGCTTTATCTCCCACTGGATTACTCATGCCATTGGAAATTTCGGATTCCATTTGGAGTGAGATATCTATGGATGGTTTACCGAAATCTGAAGGACATGAGGTAATGATGGTTGTTGTTGATAGGCTGAGTAAGTGTTGTCATTTTATTGCTTTGAAACATCCTTACACTGCGAAGTCAGTGGCTGAAGCTTTTGTTAAAGAGGTAGTTAAATTACATGGCTATCCTAAATCTATAGTTTCTGATCGTGACAAAGTACTCTTGAGTCATTTCTGGCAAGAGATGTTTCAGTTGTCAGGTACAAAATTGAGCAGAAGTACAGCTTATCACCCACAATCTGATGGACAGACAAAGGTGGTCAACAGAGGAGTGGAAACTTATTTGCGTTGGCTGCATTGGGTAGAATATTGGTATAATACCACGTACCAACAGTCGATTGGTATTATTCCATTTCAAGCTGTGTATGGTCGACTTCCTCCACCATTGATCTATTATGGAGATATGGAGACCCCTAATTCTACGTTGGATCAACAGTTGCTAGATAGAGATGTTATTTTGGGAATATTGAGGGAGAATCTTCGATTGGCACAAGATCGAAGGAAGAAATACGCTGATAAGAAGCGATGGCACGTCGAGTTTCAAGAAAGGTGATGTGGTGTTTCTTAAACTTCGACCTTATAGATAGATTTCAGTGAGGAAGAGACGGAATGAAAAGTTGTCTCCTAAATTTTTTGGCCCCTTCAAGGTGATTGCACAAATTGGACCAGTTGCCTATAAATTAGAATTACCTCCTACATCTGCTATTCATCCAGTATTCCATGTATCTCAGCTTAGGAAGGTGGTTAGCAATCTTAGGGATGTGCATCCATTAGTTTCTTTCTTGACAGAAAATGTGGAGTGGGTGGCTATTCCGGTAGAAATACTTGGTTATCGGAAACATACATCTACAAAGGAGTGGGAGGTGCTTATTCGTTGGCAAGGACTTCCACCACATGAATCCACATGGGAGAATTGTAATGATTTCGCTCAACAATTTCCTCATTTCCACCTTGAGGACAAGGTGTCTTTGGAGAGGGGGAGTAATGTTTCAAGGTTCTAACCAACAATATCAAATAAAACACCTATCAATGGTTAAATAGAGACAGTACTCTGTGTTTCTTTATTTATATATAAGCCAAAAAGTTACAGCCACAATATGAAATAACAGAGAAAGGAAATAACAAAGGAAACATACCAGCACCCTTTACAAGAAGGATACCCCTCTATGGCTACAGCCGCCCTCTTTAACCTAAAGATGACAAAAAAATACCTACCTCCCTATTTCCCATCATTCACTATTTATAGCCTCCCTCAATTTCCTCCCCAGTGGTCCCCTGCACGATCTCTCTCTCTCACTCATTCTCCCTCATTAATTGTTGATGAATTTCCCTTTTTGCCCTTTCTAACATGTGTGTGTATAATTGGGGGCCTCACGATACCCCTCGGTTCCAGATTCACCTTGTCCTCAAGGTGGAAGGTGGGACACTGTTGATTCATCTGATAGACAGCTTCCCATGTGGTTTCAATTTCCGTTAACTTCTTCCACTTTAACTAACCATTCATTAGCTCCCAAATCCTTGTTCCAGCGAACTCCCAATACCTGTTTTGGCCATAGTTGTAGTTCGAATTATGTTGTCAATATAGGCTGTTGTTGCACAACGTGTTACTTACCCAATTTGAGCTTCAGCTGAGAGATGTGGAACACATCATGGATAACCGCTTCTTGTGGAAGTTTCAGTCTATATGCCACCTCTCCGATTTCTTCAATGATTGTATACGGTCCATAGAATTTCGGTGCTAGCTTTTCACATCTTTTCCGAGCTAAGGACCTCTGCCTATAAGGTATGAGTTTTAGGTATACTTCATCTCCTACCTTGAACTTAAGTTCCCTTCTTTTAGTGACTGCCCAATTCTTCATGCAGTTTTGAGCCAAGTGAAGATTCTCTTTCAAAGCGTTCAATGCCAGGTCTCTCTCTTTTAACATTAATTCTACCTCATCATTCTGAATCTTTTTGGTTCCATATGATAGAAGGGGGGGGTGGTTGCCTACCATATACGATCTGGAACAGGTTGAATCTCATGGAAGAGTGGAAGGTGGTGTTATACCACAATTCAGCCCACGGAATAAACTTATCCCACTTCTAAGGCTGCTCATTGCAGAAGCACCTTAAGTATGTCTCCACACATTGATTTACCTTGTCCGTCTGTTTGTGGGTGAAAAGTTGTGCTTCTTTTCAATTTAGTCCCCACAGCCGCAAATTGTTCATTCCAAAAGTGACTAATGAATATCTTATCCTTATTTGATATTAAGGACTTTGGAACCCCATGCTTGCTAACCACTTTTTCGAAAAATGTGGCAGCCACCTGTTTAGCCGTGAATGGGTGCTTCATGGTGATGAAATAAGCATACTTGCTCAATCTCTCCACAACCTCCATTATCATGTTCACCCCTCTTGCCTTAGGTAAGCCCTCTATGAAATCCATGGACCATTCTTCCAATATGGCTTTTGGAATAGGGATTGGTTGTAACACCCCTGCTGGTTTCGTTGCATCATATTTGTTCCTTTGACAGATCTCACACTACGCAACATAATTTTTTATGTCTGCCTTCATCCCCCATTCCAGTATAGTTCTTCACTCATTCTCTTGTATGTCCTCAAGAATCCCGAGTGCCCTCCCAAAATAGAGTCATGGAATGTATGTAATAAGGTGGGGATCAAGGAAGATGTCTTGGACAATACCACTCTCTTCTTATAGAATAGTTTCCCATTCTCTCAGCTAAATTTGCTGATTCCCTCCGGATTTTGTTTCAACTCCTCGATCATATTCTTTAAATCTTCATCTTGTTGGACTTCCTTATCTACCACTTCCATATCCACAATGCCATTAGTAGTCAATGAGTTCACTTCCATCGGGTATTCAATTCTAGATAGGGCATCGACTGCTTGTTTTGTAATCTGAGTTGATAGAGTATTTCAAAATCGTATCCCAAGAGTTTGGTTAACCATTCCTGGAATTGGGGTTGTACCTCCCTTTGTTCTAAGAGGAATTTCAATGTCTTTTGATCAGATATAATGGTGAACTTCCTCCCAAGTAGATAATGTCGCCATTTTTGTACTGCCAATACTACAGCCATAAGTTCTCTTTCATAAATGGACTTCGTCTGAGCTCTGTTCGACAATTTCTGGCTAAAGAAGGCTATGGGATGACCATTCTGTGATAGCACAACTCCCAACCTATCCCCGAGGCATTCGTTTCAATTAAAAAAGGGTAGATTCCAATTAGGTAGTGCTAGCACCGAAATTGTAGTCATAGCAATCTTCAGTTTTTCAAAAGCAGCTAATGCTTGGTCATCCCAAACGAAGGAGTTCTTTTGCAACAATTTGGTCATTGGAGCTGCAATTTCCCCATATCCTTTAACAAATCTTCTATAGTAGCCTGTTAAGTCCAGAAACCCTCTCAAACCCGTGACATCCTTCGGTTGGGGCCACTTCACCATGTCTCTGATTTTCTCCTCATCCGCCTCCACTCCCTTACTAGAGATTAAGTGTCCCAAATACTGGATTTGTGAGTGAGCTACGCACTTCTTATTAGCAAATAGTTGGTTATCTCTCGTTACCGCAAAAACCATTCCTAGATGCTTCTTATGTTCCGAAATATCCGTGCTATACACAAGTATATCATAAAAAAAAAACCAATACACAATGTCTTAGGAAGGTTTGAATACCTGATTCATCAAGGATTGGAAGGTGGCCGGGGCGTTTGTAAGTCCAAAAGGCATGACAAGGAATTCATAGTGGCCCTCATGTGTTCTGAATGCAGTCTTTTTGATATCTTCCTCCTTCATCCTTATTTGGTGGTAACCTGATTTCAAATCCAATTTCGAAAAACCATGGCTCATTATAATTCATCCAACAGCTCTTCTATCAGAGGGATAGGAAATTTATTAGATATGGTGACTTGATTGAGCATCCGGTAGTCCACACAAAAGCGCTGCCCTCCATCTTTCTTTTTAACCAATAAAACAGGGCTATAGTAAGGACTGTGACTGGGTCTGATCACTCCTGCTTGTAGCATTTCCACAACCAATTTCTCAATTTCTTCCTTTTGTACATGGCCATACTTATAGGGTCTGAAATTGATTGGCCTTTGATTTGGTAGAATCAAGATGCGGTGATCTATTTCTCTTTTAGGGGGCAACCTTTTAGGATCTTCAAAGATGTTTGCATACTATTGCAACAAAAACTTGATCATTGGAACCTCTTCTTCATCCCCTTTTATTTCCTGCTCCACCTCCCTATCAGCTTCTACTTCATAATTCTAGAGTTCCAACAGAAAACCCTGGTCTTCCTCTTCCCAAGTTTTCTCAATTGTTTTCAGGGAGCATTTTGCTTGGATGAGGGATGGGTCTCCTTTTAGCATAATTTTCTTTTTTCCCGACCAAAAGGTCATTGTTAGGGACGGCCAATGTATTTTCATTGTGCCTGTTGTGTCTAGCCATTGCATCCCTAAGGTTACATCCACATTTCCCAACTCAATTGCCAAAAAAACAGCCACGACAATAACTCCTTGTAGTTCCAATTCTACTCTTGCATATGCCCTTGCCCGTACATTGGGTGTCGTCTCCAACTGTAACCGCAAATGGAGTACCTTCTTCCAAGGTCATATTCTTTTCCTCTTCTGTCCTGTTATGTATGAAGTTGTGGGTGGCTCCACTATCAATCAACACCACCACTCCCTTGCCCCTTATAACCCCCTTCAGCTTCATGGTTCCCTTCGATGCCATCCCATGGATGGTTTTTAACTCTATTTCCTCTGCAGAACTAGATGGTTTAATTCCAGCACCTCTCCTGGGTTCTCTTTTGTCTTACCTTCGTCTTATTTTCTTCTTCATTCATGATAAATAACATCAATTCCCTTTTTTCCTTCACTCTACATCGATGCTTTGGTGTATATCTCTCATTGCATTTGAAACATTGGCCCTTGTCCAGTCTGGACCTGAACTCTGCGTCTGACAAGTGTTTGATAGGTGGTTCACTCTTTTGGTAATTAGGGTTCACTCTTTTGGTAATTACCCTTAATGAGTATGGTTACCTGTTTCATAGGAAAATCTGTCTTCCTCACGAAACCTTTGTCTGTTCCCTCTTGGAGTTTGCTCGCGTACTCTTCTCTTTTCTTTGGTTCCATTATCCTCCCATCGACCTTAGTCAATCTCATTGCTAAATTGCGATCATTGACTAGTTGAGCCTCTCATACAATCTTCCAACGTTTGGGGATATCTGCTAACGACTTCTGCTTGAAGGTTGGGTTCTAGACCAGTTAGAAAAGCATCTCGCAACACACTCTCTACCATGTGAGGTAGAGGAGTTGAATATGTGACAAATTTCTTCACATAATCAGTGTAGGAGCCGTCTTGTTGAATTCTAATCAAGCGTGTCACTAAACTCGTTTGTCCTGAGTCCTTGAAGAAGTCAAACATCCTTCCTTTCAAGTCTTCTCATGACTCTACTCTTTTCCTATTATGCGTCCACCGGTACCAATCCACTTCATCCTGCCCAAAACTGACCAAAGCCATTTTGATCTTCTCTGTTTTTGGCAGATTGTTGATTTCAAAAAAATGTTCTGCCCTGGATACCCAAGATTCTGGATTTTCGCCTAAGAACATAGGCATTTCCAACTTTTTGTACTTGCTTCGATCCACAGTGTTTTCGTTAACATCATTACTGAGTTCCGATTCCTCTACTTTCCCTTTTTCCCTTTTAACTTCATGATCGATCCATCCGATGTCCCAGATTCATCCCTTTTCTTATAGCTATGATTTTCCATTAGTTCCTCCGCCATTCTTTCCATTAGTTCCTACGCCATTCTTTCCATTAGTTCCTCTGCCATTCTTTCCATAGACTTTTTCATCTCCAATAACATTTCCTTCATGCTCAATATCTCCTTCTCAGTTCCTTCCATTCTTTCCTCCATCTGTCTTTGTGCCACGAGTCACGTAACAACCCCCAGTTTTCGCGCTCTGATACCAAATGTCAGGGTTCTAACCAACAATATCAAATAAAAAACCTAACAACGGCTAAACAGAGACAGTACTGTGTGTTTCTTTATTTATATATAAGCCAAAAAGTTACGGCCACAATATGAAATATAGCAGAGAAAGGATTAACAAAGGAAACATACTAGCACCCTTTACAAGAAGGATACCTCCTCTATGGCTACAACCACCCTCTTTAACCTAAAGATGACAAAAAAAAATACCTACCTCGCTATTTCCCATCAATCACTATTTATTGCCTCCCTCAATTTCCTCCCCAGTGGGGCCCACCTGCACGATCTCTCTCTCCCACTCATTCTCCCTCATTAATTGTTGGTGAATTTCCCTTTTTGCCCTTTCTAACATATGTGTGTATAATTGGGGGCCTCAAATAATGATAGACCACCAATTATTTTACAATATAGTAGGAGGAAAAAGGGAGCAGTTGCATGTGAACAAGAGAAGGGAAATGGAGAAAGAAGTGGAAACCACCTTGGTGGGGACCATGGTTAGTTACATGGGAGGGAGTTAAAAGGGAAAGAAGGAAGGGAAGAGAGGGGTGGTTAGTCAGTTTTGGGATGTGGAGGACTGTAATTTCCTGGAGAGCAGGGAATGCAGAAAGTGGTCAGTTTCTGTAGTCTGTAGCAAGTTATTTCCATTATCATGAAGTACTTTACTGTTTTGATGTTTTATGTTGAATTTGGTTTATCTTTGTATTAGTTCTTGTGTTGTACTTTGTTTTCAAGACTGTGTTAGTACTGTTTTTTCTGTAAAAGTTTGGCTGATTAATAAATTAGTAGAACACACTACTTGGTGTTCTATCAATATAGTTAGTCAAGCTAGATAACACTTATATTCATGTATATTACAAAATTAAACTATTTCATTCACAATGCAGCAATTATTCAGTCTATTCCGGACTTACTTGCGGAACATAGACAACTGGTGCATTTTATTATTTGAACCGAAAAAAGGAAAAGGAAATGCTACGAAGACGACTGTGTTGCTTATTATCTAGCTCACTTGCTTCTGTTCATACTAAACCCCCACCTGCTATTGTAATAAACCAAGCATTATCGCGTCCATTCTTAGAGTTCCAGCAAAACCCTTTCCTTGATCGGTGTGTAGGTTCCCTTCCTTCTGGAAATATCTTTGGTTTTCGAGCTTTCAGCCTTTTGAGCTTAAATGATCTGAGAGATAAGGTTCCAAGAAAACAGAAAACAAGAAAGGGTCGTGGTATTGGTTCTGGGAAGGGGAAGACGGCTGGAAGAGGTCACAAGGGCCAAAGAGCAAGAGGTTCTGGGAAGCTTGGGTTTGAAGGTGGTCAAACCCCACTGCGCCGCAGGCTTCCTAAAAGAGGGTTTAAAAATCCTTTCAGCCTCACATTTCAGGTATTTGATTTATGTTTTCTTCTTTTTGGTTTGTTTCTTGTGATCTGTGTTCTAAAAAGTCCACAGCCCACTGAGTCATGCACCTTAGTGCGATTAAGTAGGCGCACACAACCTTTGTGTGACTGTCTCACTTTAAATAATCTCGAGGCTCCCTTAGTGAAGCCCACTTGAAGCTCTGTCTCAAGGCTTGTGATGTTTGCCTCAATGCCTCGAGCTTGATTTCTTACTCTTTCCTCTTTTAGTATTTAAGTAATAATTATATTGATATTCCTACCATCTGTTAAAAGCTCTATTTTGTTGAGCTTTTTATTATTATTCATCATACTAATTTTCTTCATACTTCAAACATTTACATTTTTCTATTGTGCACCCCGAGCTTTATTTATTTCTTAAAGAACTTATTTCCTTCCTTTGATGCAGAATTGTATAATGCATTCCGTTTTCATCTTGAAGAAAGCATGTCTTTAATATCCATATCTACTTTTTTTTGCTGTGAATTGCATGTGATGTCTTAAGCAATTCATATTGCATGATCTTTGAAGATTTACCTTCTGCACTTTGCATTACTTAATGCACAGCACAGTTGGTATCTTCTGGTGTTTGGTCCCTAGCACATATATACATGCGCGCGCACACAGATTTGTTTGGGCAGAATATTTTGGAAAATTGCATTAGATGACAAAAAAATTTAGAAAGAAGCAACCCATAGCACCTCCTTTTTGCATATTGCAAATATGACAAATATAACAAATATGACAAATAATTAAATATATCATAGGGCTATCCGCTTTTAAATTTGCTACTTTTGCAATTTAGAAAATGTAGTGACATAGGCTCTATTATTGTAAATTTTTTGCTATTTTTGCTAACACTCCGAATATTTTCTCCTTGAGTATTATGATATTTCTCTATTGATTCCTTTTTTCTTTTATGACAGCCAGTTGGTTTGGGAAAGATTGCTAAACTTATAAATGCTGGGAAAATTGATTCTTCTGAATTAATAACTATGAAAACTCTCAAGGTATTATTTTCTTTCTACCTTGATTAATTTATCAAAAACTTGAAGTAGTTGTTTTTAATATTGTGTCGAATGCATTATGAAAACAGGATACAGGTGCAATTGGAAAACAAATAGAGGATGGGGTAAGATTGATGGGACGTGGTGCCGAACATATCAAGTGGCCAATTCACCTAGAGGTAAATCTTCAACTAAAAAAAAAATTCTTTTTCCTTCTAACAAGTACTTCAAAACCTATATTTATATGGTCCTTAGTTAGTCTGATGTTCTGTATAAATTATTCATAAATCTGGGGGTATTTTCATCTCATGCTACTAATATGAAGCTTATGTACACTCTTCTTGAAGAAGGTTCTAGTGCTGCAGATGTTCTTCCAAGGGTTTCATTTAGCCTCCTTTCTAGTCTGGTTTGGGATCCAGTTGCATTCAGATTTCAGTTTACCCGTATGTACTATATATTGTTTTAAAAAAGGAACAAAACTCTTTTATTGATATAATAATGAGACAAGGCTTATAGTATGCAAGAATTGTACAATGAGCTGAAAACCTAAGGATCGTAAGGAACGCTTGGAAATTCAACTATGTTGACACCCCCTTATCAAAAATGGAAACCTTACAAAACTATCAAAACTTTCCATTTGAGACCCAACGAAGCCTAGATGACAGTGTCAGCTAATACAAAGGAGTCTGAAGAGATAATTCCTTCTAGAACAAAAGGCTAATCAACAAAAGCAAGAGAACAAAAGGCCAACCGGCTCCATGCCCACAGATAAGATGAAAACGTAAAAGCTCTCCAAATCATGTTGAGCTCCAGGAGTTCTGTAACTGTCAAACTCCTTAGAAGGATGCATCAAGATGAAGCATTTCTACGAGCGATTTCATTAGAATCCAACCAACCAAGGGAATGGTCATGGTTCCTTTTAAACCATAAATCTGCCAAAATCACATCTGCCAAAATCACTTTTACTGCAAACGAGTGGTTTTGTTGAACAAAGCCCTCCTACAAACTGCCATACCGATCCTCTAAAATCATCACTTTCCATGATGGCGAAGTCTCAAGCTAAAACCTTATAACTCCATAGACACTTGATGAAACACAAATAGAAAACTTTTTTCTTTGATTCTTGAATAAGTGCCAAATCCGAATTATGAGACTTTAAAAAAACTTTTGAGGCCGATCTTTTTTTGGATTTTTCAATCCGCTAGAATTTCATGAAACAATTTTCATTGTCTATCGAACTTTTCACTAACATGGTATGAAATGAAATGAATAAATAAGTACGTAGCAATATCTACTCTGTTTTACAAAACATTTTCAGGTAGAAGTTCTGAAACAACAATGTAATAAAGTTCAGAATAGGGTTGTAAATGACTCGGTTTGGCTTTGTTACTGTATAAAACCAGAGCCGAACCTGCACTTCATCTATCACCTTTGAAGTTACCTTATTACCCTTTTGAGAGTAATGTATAAAGGATTGGGGTCTTACAGAATATTCTTTCTGTTTGTGTAGCTTGTGCAGACATTGGTATTTGCTTGTGATTGGCAATCTTAGTTAGAATATTCCTTATCCTTATTTAGAATATCCTTTCTGTTTGTGTAGCTTGTGCAGACATTGTTATTTGCTTGCGATTGACATTCTTAGTTTACACAAAGAGATTGCAAAACTTGTATTTCCTAATTTTGTTATAGTCAAAGCTCTGAAGTCTGAAATCTGAAGTCTTTCATCTTTAACCAAGTGGATTGTTCCAAGAGCCCCAGATTTAACGATCAAGAGCTTCTTGCACTTGGCACTAACCTTCAATGTGTGATGTTCAGGTGTCGAGGGTCACTGTTCGAGCAAAAGAAGCTGTCGAAGCTGCAGGTGGGACTGTTCGAAGAGTATATTACAACAAATTAGGCCTTCGGGCGCTCCTCAAGCCCGAGTGGTTTGAAAAGAAAGGGAGACTCCTACCACGTGCGGCAAGGCCACCACCAAAGCAACAAGACAAAGTCGACAGCATTGGCCGCTTGCCTGCTCCAACTAAACCTATTCCTTTTTCAGTTGAATATGAAGATGGAGGAAAGGCAGCGTCCAATTTGTCTACCTGAGCATCATACTTCGATTTAAGGAATTTAAGTTTTGGTTGTCATTTTCAACTGCATTCTCTCTAGTAATATGCTCATGGTTTTGTTTCTATTAATATTCACACATATGTTAGGATTAATGATGGATGTCGGCCGCATTTCACCTGAGATTTTACGGTTTCAGGGTGGTAATCAAAATCACGTTGTTTTATCTACAATCGAGTTCAATAAAAGATAATATGTTCATACGTTTTGGGCAAATATCAATTTAACCCCTTGGCTGCATTAACTGAAACTTTGAACTAATGATAATTGTTTCAATTTAAACCAACTTTATACTCTATTTTGTTTGTCCAATATGTTTTGAGTTAATCCATTTAATCTCTTTTGGATTTTTTTTGTTCAATATGGAAATTTTCTTGACTACTGCTTTG

mRNA sequence

ATGCTACGAAGACGACTGTGTTGCTTATTATCTAGCTCACTTGCTTCTGTTCATACTAAACCCCCACCTGCTATTGTAATAAACCAAGCATTATCGCGTCCATTCTTAGAGTTCCAGCAAAACCCTTTCCTTGATCGGTGTGTAGGTTCCCTTCCTTCTGGAAATATCTTTGGTTTTCGAGCTTTCAGCCTTTTGAGCTTAAATGATCTGAGAGATAAGGTTCCAAGAAAACAGAAAACAAGAAAGGGTCGTGGTATTGGTTCTGGGAAGGGGAAGACGGCTGGAAGAGGTCACAAGGGCCAAAGAGCAAGAGGTTCTGGGAAGCTTGGGTTTGAAGGTGGTCAAACCCCACTGCGCCGCAGGCTTCCTAAAAGAGGGTTTAAAAATCCTTTCAGCCTCACATTTCAGCCAGTTGGTTTGGGAAAGATTGCTAAACTTATAAATGCTGGGAAAATTGATTCTTCTGAATTAATAACTATGAAAACTCTCAAGGATACAGGTGCAATTGGAAAACAAATAGAGGATGGGGTAAGATTGATGGGACGTGGTGCCGAACATATCAAGTGGCCAATTCACCTAGAGGTGTCGAGGGTCACTGTTCGAGCAAAAGAAGCTGTCGAAGCTGCAGGTGGGACTGTTCGAAGAGTATATTACAACAAATTAGGCCTTCGGGCGCTCCTCAAGCCCGAGTGGTTTGAAAAGAAAGGGAGACTCCTACCACGTGCGGCAAGGCCACCACCAAAGCAACAAGACAAAGTCGACAGCATTGGCCGCTTGCCTGCTCCAACTAAACCTATTCCTTTTTCAGTTGAATATGAAGATGGAGGAAAGGCAGCGTCCAATTTGTCTACCTGA

Coding sequence (CDS)

ATGCTACGAAGACGACTGTGTTGCTTATTATCTAGCTCACTTGCTTCTGTTCATACTAAACCCCCACCTGCTATTGTAATAAACCAAGCATTATCGCGTCCATTCTTAGAGTTCCAGCAAAACCCTTTCCTTGATCGGTGTGTAGGTTCCCTTCCTTCTGGAAATATCTTTGGTTTTCGAGCTTTCAGCCTTTTGAGCTTAAATGATCTGAGAGATAAGGTTCCAAGAAAACAGAAAACAAGAAAGGGTCGTGGTATTGGTTCTGGGAAGGGGAAGACGGCTGGAAGAGGTCACAAGGGCCAAAGAGCAAGAGGTTCTGGGAAGCTTGGGTTTGAAGGTGGTCAAACCCCACTGCGCCGCAGGCTTCCTAAAAGAGGGTTTAAAAATCCTTTCAGCCTCACATTTCAGCCAGTTGGTTTGGGAAAGATTGCTAAACTTATAAATGCTGGGAAAATTGATTCTTCTGAATTAATAACTATGAAAACTCTCAAGGATACAGGTGCAATTGGAAAACAAATAGAGGATGGGGTAAGATTGATGGGACGTGGTGCCGAACATATCAAGTGGCCAATTCACCTAGAGGTGTCGAGGGTCACTGTTCGAGCAAAAGAAGCTGTCGAAGCTGCAGGTGGGACTGTTCGAAGAGTATATTACAACAAATTAGGCCTTCGGGCGCTCCTCAAGCCCGAGTGGTTTGAAAAGAAAGGGAGACTCCTACCACGTGCGGCAAGGCCACCACCAAAGCAACAAGACAAAGTCGACAGCATTGGCCGCTTGCCTGCTCCAACTAAACCTATTCCTTTTTCAGTTGAATATGAAGATGGAGGAAAGGCAGCGTCCAATTTGTCTACCTGA

Protein sequence

MLRRRLCCLLSSSLASVHTKPPPAIVINQALSRPFLEFQQNPFLDRCVGSLPSGNIFGFRAFSLLSLNDLRDKVPRKQKTRKGRGIGSGKGKTAGRGHKGQRARGSGKLGFEGGQTPLRRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGVRLMGRGAEHIKWPIHLEVSRVTVRAKEAVEAAGGTVRRVYYNKLGLRALLKPEWFEKKGRLLPRAARPPPKQQDKVDSIGRLPAPTKPIPFSVEYEDGGKAASNLST

Homology

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BLAST of CsaV3_5G027610 vs. NCBI nr
Match: XP_004142813.1 (PREDICTED: 54S ribosomal protein L10, mitochondrial [Cucumis sativus] >XP_011655431.1 PREDICTED: 54S ribosomal protein L10, mitochondrial [Cucumis sativus] >KGN51413.1 hypothetical protein Csa_5G532450 [Cucumis sativus])

HSP 1 Score: 531.6 bits (1368), Expect = 1.7e-147
Identity = 284/284 (100.00%), Postives = 284/284 (100.00%), Query Frame = 0


Query: 1   MLRRRLCCLLSSSLASVHTKPPPAIVINQALSRPFLEFQQNPFLDRCVGSLPSGNIFGFR 60
           MLRRRLCCLLSSSLASVHTKPPPAIVINQALSRPFLEFQQNPFLDRCVGSLPSGNIFGFR
Sbjct: 1   MLRRRLCCLLSSSLASVHTKPPPAIVINQALSRPFLEFQQNPFLDRCVGSLPSGNIFGFR 60

Query: 61  AFSLLSLNDLRDKVPRKQKTRKXXXXXXXXXXXXXXXHKGQRARGSGKLGFEGGQTPLRR 120
           AFSLLSLNDLRDKVPRKQKTRKXXXXXXXXXXXXXXXHKGQRARGSGKLGFEGGQTPLRR
Sbjct: 61  AFSLLSLNDLRDKVPRKQKTRKXXXXXXXXXXXXXXXHKGQRARGSGKLGFEGGQTPLRR 120

Query: 121 RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGVRLM 180
           RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGVRLM
Sbjct: 121 RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGVRLM 180

Query: 181 GRGAEHIKWPIHLEVSRVTVRAKEAVEAAGGTVRRVYYNKLGLRALLKPEWFEKKGRLLP 240
           GRGAEHIKWPIHLEVSRVTVRAKEAVEAAGGTVRRVYYNKLGLRALLKPEWFEKKGRLLP
Sbjct: 181 GRGAEHIKWPIHLEVSRVTVRAKEAVEAAGGTVRRVYYNKLGLRALLKPEWFEKKGRLLP 240

Query: 241 RAARPPPKQQDKVDSIGRLPAPTKPIPFSVEYEDGGKAASNLST 285
           RAARPPPKQQDKVDSIGRLPAPTKPIPFSVEYEDGGKAASNLST
Sbjct: 241 RAARPPPKQQDKVDSIGRLPAPTKPIPFSVEYEDGGKAASNLST 284

[Close]

BLAST of CsaV3_5G027610 vs. NCBI nr
Match: XP_008460571.1 (PREDICTED: 50S ribosomal protein L15 [Cucumis melo] >XP_016902580.1 PREDICTED: 50S ribosomal protein L15 [Cucumis melo])

HSP 1 Score: 508.8 bits (1309), Expect = 1.2e-140
Identity = 276/284 (97.18%), Postives = 277/284 (97.54%), Query Frame = 0


Query: 1   MLRRRLCCLLSSSLASVHTKPPPAIVINQALSRPFLEFQQNPFLDRCVGSLPSGNIFGFR 60
           MLRR+LC LLSSSLASV TKPPPAIVINQAL  PFLEFQQNP LDRCVGS  SGNIFGFR
Sbjct: 1   MLRRQLCYLLSSSLASVRTKPPPAIVINQALLHPFLEFQQNPCLDRCVGSPLSGNIFGFR 60

Query: 61  AFSLLSLNDLRDKVPRKQKTRKXXXXXXXXXXXXXXXHKGQRARGSGKLGFEGGQTPLRR 120
           AFSLLSLNDLRDKVPRKQKTRKXXXXXXXXXXXXXXXHKGQRARGSGKLGFEGGQTPLRR
Sbjct: 61  AFSLLSLNDLRDKVPRKQKTRKXXXXXXXXXXXXXXXHKGQRARGSGKLGFEGGQTPLRR 120

Query: 121 RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGVRLM 180
           RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGVRLM
Sbjct: 121 RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGVRLM 180

Query: 181 GRGAEHIKWPIHLEVSRVTVRAKEAVEAAGGTVRRVYYNKLGLRALLKPEWFEKKGRLLP 240
           GRGAEHIKWPIHLEVSRVTVRAKEAVEAAGGTVRRVYYNKLGLRALLKPEWFEKKGRLLP
Sbjct: 181 GRGAEHIKWPIHLEVSRVTVRAKEAVEAAGGTVRRVYYNKLGLRALLKPEWFEKKGRLLP 240

Query: 241 RAARPPPKQQDKVDSIGRLPAPTKPIPFSVEYEDGGKAASNLST 285
           RAARPPPKQQDKVDSIGRLPAPTKPIPFSVEYEDGGKAASNLST
Sbjct: 241 RAARPPPKQQDKVDSIGRLPAPTKPIPFSVEYEDGGKAASNLST 284

[Close]

BLAST of CsaV3_5G027610 vs. NCBI nr
Match: XP_022933073.1 (uncharacterized protein LOC111439779 [Cucurbita moschata] >XP_022933074.1 uncharacterized protein LOC111439779 [Cucurbita moschata] >XP_022933075.1 uncharacterized protein LOC111439779 [Cucurbita moschata])

HSP 1 Score: 471.1 bits (1211), Expect = 2.7e-129
Identity = 255/282 (90.43%), Postives = 262/282 (92.91%), Query Frame = 0


Query: 1   MLRRRLCCLLSSSLASVHTKPPPAIVINQALSRPFLEFQQNPFLDRCVGSLPSGNIFGFR 60
           MLRRRLC LLSSS ASV TKPPPA  INQA+SRPFLEFQQNP LDR VG   SGN+ GFR
Sbjct: 1   MLRRRLCYLLSSSFASVRTKPPPAFAINQAVSRPFLEFQQNPSLDRSVGFPLSGNVLGFR 60

Query: 61  AFSLLSLNDLRDKVPRKQKTRKXXXXXXXXXXXXXXXHKGQRARGSGKLGFEGGQTPLRR 120
           A+SLLSLNDLRDKVPRKQKTRK XXXXXXXXXXXX  HKGQ+ARGSGKLGFEGGQTPLRR
Sbjct: 61  AYSLLSLNDLRDKVPRKQKTRKGXXXXXXXXXXXXRGHKGQKARGSGKLGFEGGQTPLRR 120

Query: 121 RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGVRLM 180
           RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSS+LITMKTLKDTGAIGKQI+DGVRLM
Sbjct: 121 RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSQLITMKTLKDTGAIGKQIQDGVRLM 180

Query: 181 GRGAEHIKWPIHLEVSRVTVRAKEAVEAAGGTVRRVYYNKLGLRALLKPEWFEKKGRLLP 240
           GRGAE IKWPIHLEVSRVTVRAK AVEAAGGTVRRVYYNKLG RALLKPEWFEKKGRLLP
Sbjct: 181 GRGAEQIKWPIHLEVSRVTVRAKAAVEAAGGTVRRVYYNKLGFRALLKPEWFEKKGRLLP 240

Query: 241 RAARPPPKQQDKVDSIGRLPAPTKPIPFSVEYEDGGKAASNL 283
           RAARPPPKQQDKVDSIGRLPAPTKPIPFSV  EDGG AASN+
Sbjct: 241 RAARPPPKQQDKVDSIGRLPAPTKPIPFSV--EDGGGAASNV 280

[Close]

BLAST of CsaV3_5G027610 vs. NCBI nr
Match: XP_023530556.1 (uncharacterized protein LOC111793072 [Cucurbita pepo subsp. pepo] >XP_023530565.1 uncharacterized protein LOC111793072 [Cucurbita pepo subsp. pepo] >XP_023530574.1 uncharacterized protein LOC111793072 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 467.2 bits (1201), Expect = 3.9e-128
Identity = 253/282 (89.72%), Postives = 261/282 (92.55%), Query Frame = 0


Query: 1   MLRRRLCCLLSSSLASVHTKPPPAIVINQALSRPFLEFQQNPFLDRCVGSLPSGNIFGFR 60
           MLRRRLC  LSSS ASV TKPPPA  INQA+SRPFLEFQ+NP LDR VG   SGN+ GFR
Sbjct: 1   MLRRRLCYFLSSSFASVRTKPPPAFAINQAVSRPFLEFQRNPSLDRSVGFPLSGNVLGFR 60

Query: 61  AFSLLSLNDLRDKVPRKQKTRKXXXXXXXXXXXXXXXHKGQRARGSGKLGFEGGQTPLRR 120
           A+SLLSLNDLRDKVPRKQKTRK XXXXXXXXXXXX  HKGQ+ARGSGKLGFEGGQTPLRR
Sbjct: 61  AYSLLSLNDLRDKVPRKQKTRKGXXXXXXXXXXXXRGHKGQKARGSGKLGFEGGQTPLRR 120

Query: 121 RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGVRLM 180
           RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQI+DGVRLM
Sbjct: 121 RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIQDGVRLM 180

Query: 181 GRGAEHIKWPIHLEVSRVTVRAKEAVEAAGGTVRRVYYNKLGLRALLKPEWFEKKGRLLP 240
           GRGAE IKWPIHLEVSRVTVRAK AVEAAGGTVRRVYYNKLG RALL PEWFEKKGRLLP
Sbjct: 181 GRGAEQIKWPIHLEVSRVTVRAKAAVEAAGGTVRRVYYNKLGFRALLTPEWFEKKGRLLP 240

Query: 241 RAARPPPKQQDKVDSIGRLPAPTKPIPFSVEYEDGGKAASNL 283
           RAARPPPKQQDKVDSIGRLPAPTKPIPFSV  EDGG+AAS+L
Sbjct: 241 RAARPPPKQQDKVDSIGRLPAPTKPIPFSV--EDGGEAASSL 280

[Close]

BLAST of CsaV3_5G027610 vs. NCBI nr
Match: XP_022998443.1 (uncharacterized protein LOC111493075 [Cucurbita maxima] >XP_022998452.1 uncharacterized protein LOC111493075 [Cucurbita maxima] >XP_022998460.1 uncharacterized protein LOC111493075 [Cucurbita maxima])

HSP 1 Score: 465.3 bits (1196), Expect = 1.5e-127
Identity = 252/282 (89.36%), Postives = 261/282 (92.55%), Query Frame = 0


Query: 1   MLRRRLCCLLSSSLASVHTKPPPAIVINQALSRPFLEFQQNPFLDRCVGSLPSGNIFGFR 60
           MLRRRLC LLSSS ASV TKPPPA  INQA+SRPFLEFQ+NP LDR VG   SGN+ GFR
Sbjct: 1   MLRRRLCYLLSSSFASVRTKPPPAFAINQAVSRPFLEFQRNPSLDRSVGFPLSGNVLGFR 60

Query: 61  AFSLLSLNDLRDKVPRKQKTRKXXXXXXXXXXXXXXXHKGQRARGSGKLGFEGGQTPLRR 120
           A+S+LSLNDLRDKVPRKQKTRK XXXXXXXXXXXX  HKGQ+ARGSGKLGFEGGQTPLRR
Sbjct: 61  AYSILSLNDLRDKVPRKQKTRKGXXXXXXXXXXXXRGHKGQKARGSGKLGFEGGQTPLRR 120

Query: 121 RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGVRLM 180
           RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQI+DGVRLM
Sbjct: 121 RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIQDGVRLM 180

Query: 181 GRGAEHIKWPIHLEVSRVTVRAKEAVEAAGGTVRRVYYNKLGLRALLKPEWFEKKGRLLP 240
           GRGAE IKWPIHLEVSRVTVRAK AVEAAGGTVRRVYYNKLG +ALLKPEWFEKKGRLLP
Sbjct: 181 GRGAEQIKWPIHLEVSRVTVRAKAAVEAAGGTVRRVYYNKLGFQALLKPEWFEKKGRLLP 240

Query: 241 RAARPPPKQQDKVDSIGRLPAPTKPIPFSVEYEDGGKAASNL 283
           RAARPPPKQQDKVDSIGRLPAPTKPIPF V  EDGG AAS+L
Sbjct: 241 RAARPPPKQQDKVDSIGRLPAPTKPIPFWV--EDGGDAASSL 280

[Close]

BLAST of CsaV3_5G027610 vs. TAIR10
Match: AT5G64670.1 (Ribosomal protein L18e/L15 superfamily protein)

HSP 1 Score: 361.3 bits (926), Expect = 5.5e-100
Identity = 199/271 (73.43%), Postives = 215/271 (79.34%), Query Frame = 0


Query: 1   MLRRRLCCLLSSSL--ASVHTKPPPAIVINQALSRPFLEFQQNPFLDRCVGSLPSGNIF- 60
           MLRRRL  ++S+SL  +S H    P  +I    S P L+ + +P   +   S      F 
Sbjct: 1   MLRRRLLSIISTSLINSSFHQTAKPRFII----SSPLLQCRPSPISTQIPTSTSRALSFQ 60

Query: 61  GFRAFSLLSLNDLRDKVPRKQKTRKXXXXXXXXXXXXXXXHKGQRARGSGKLGFEGGQTP 120
           G RA+SLLSLNDLRD VPRK KTRK     XXXXX     HKGQ+ARG+ K GFEGGQTP
Sbjct: 61  GIRAYSLLSLNDLRDNVPRKLKTRKGRGIGXXXXXTAGRGHKGQKARGTMKFGFEGGQTP 120

Query: 121 LRRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGV 180
           LRRRLPKRGFKN F L FQPVGLGKIAKLINAGKIDS ELITMKTLKD GAIGKQIEDGV
Sbjct: 121 LRRRLPKRGFKNKFKLHFQPVGLGKIAKLINAGKIDSHELITMKTLKDVGAIGKQIEDGV 180

Query: 181 RLMGRGAEHIKWPIHLEVSRVTVRAKEAVEAAGGTVRRVYYNKLGLRALLKPEWFEKKGR 240
           RLMGRGA+ IKWP+H EVSRVTVRAKE VEAAGG+VRRVYYNKLGLRALLKPEWFEKKGR
Sbjct: 181 RLMGRGADDIKWPLHFEVSRVTVRAKEVVEAAGGSVRRVYYNKLGLRALLKPEWFEKKGR 240

Query: 241 LLPRAARPPPKQQDKVDSIGRLPAPTKPIPF 269
           LLP+AARPPPKQQDKVDSIGRLPAP KPIPF
Sbjct: 241 LLPKAARPPPKQQDKVDSIGRLPAPKKPIPF 267

[Close]

BLAST of CsaV3_5G027610 vs. TAIR10
Match: AT3G25920.1 (ribosomal protein L15)

HSP 1 Score: 45.1 bits (105), Expect = 8.7e-05
Identity = 52/184 (28.26%), Postives = 84/184 (45.65%), Query Frame = 0


Query: 76  RKQKTRKXXXXXXXXXXXXXXXHKGQRAR-GSGKL-GFEGGQTPLRRRLPK-RGFKNPFS 135
           RK++ RK                +GQ++R G G + GFEGGQT L RRLPK RG      
Sbjct: 93  RKKQKRKGRGISAGQGASCGFGMRGQKSRSGPGIMRGFEGGQTALYRRLPKLRGIAGGMR 152

Query: 136 LTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAI---GKQIEDGVRLMGRGAEHIKW 195
            +  P  L    K I        + ++++TLK  G I   G++ +  ++++G G   +K 
Sbjct: 153 -SGLPKYLPVNIKDIETAGFQEGDEVSLETLKQKGLINPSGRERKLPLKILGTGELSMK- 212

Query: 196 PIHLEVSRVTVRAKEAVEAAGGTVRRVYYNKLGLRALL------KPEWFEKKGRLLPRAA 248
            +  +    + +AKE +EA+G T+  +   K  ++  +        E+F KK      AA
Sbjct: 213 -LTFKARAFSTQAKEKLEASGCTLTVLPGRKKWVKPSVAKNQARADEYFAKKRAAAAEAA 272

[Close]

BLAST of CsaV3_5G027610 vs. Swiss-Prot
Match: sp|P36520|RM10_YEAST (54S ribosomal protein L10, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=MRPL10 PE=1 SV=2)

HSP 1 Score: 100.1 bits (248), Expect = 4.1e-20
Identity = 60/154 (38.96%), Postives = 87/154 (56.49%), Query Frame = 0


Query: 99  KGQRARGSGKLGFEGGQTPLRRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGK--IDSSE 158
           KGQ+ARG  K  FEGGQTP+ +  PK GF N  +   + + L +I    +  +  +   E
Sbjct: 94  KGQKARGKVKSWFEGGQTPIYKLFPKIGFTNVGAKPLKELNLKRIQWFHDKNRLHLQPGE 153

Query: 159 LITMKTLKDTGAIGKQIEDGVRLMGRGAEHIKWPIHLEVSRVTVRAKEAVEAAGGTVRRV 218
           ++ M  ++  G +   I+ GV+++  G  H   PI LE SR + +A  A+E AGG     
Sbjct: 154 VLDMNKMRKLGLVTGPIKYGVKILASGKFHYNLPIALEASRASAKAIAAIEKAGGKFTAR 213

Query: 219 YYNKLGLRALLKPEWF-EKKGRLLPRAARPPPKQ 250
           YY  LGLRA L P+WF EK+GR +P  ARP  ++
Sbjct: 214 YYTPLGLRAHLNPQWFLEKRGR-VPLQARPTKRR 246

[Close]

BLAST of CsaV3_5G027610 vs. Swiss-Prot
Match: sp|A9H3K5|RL15_GLUDA (50S ribosomal protein L15 OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) OX=272568 GN=rplO PE=3 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 9.1e-20
Identity = 73/152 (48.03%), Postives = 92/152 (60.53%), Query Frame = 0


Query: 65  LSLNDLRDKV-PRKQKTRKXXXXXXXXXXXXXXXHKGQRAR-GSGKLGFEGGQTPLRRRL 124
           ++LN+LRD    R +K R       XXXXXXXXX KGQ+AR G    GFEGGQ PL RRL
Sbjct: 1   MNLNELRDNAGSRYRKKRLGRGIGSXXXXXXXXXVKGQKAREGVSLNGFEGGQLPLYRRL 60

Query: 125 PKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGVRLMGR 184
           PKRGFKN F   + PV LG + K I  GKID+  ++T   L+  G +G     GVRL+ +
Sbjct: 61  PKRGFKNIFRKEYAPVNLGALDKAIADGKIDAGTVVTEDVLRTAGLVGSGKFAGVRLLAK 120

Query: 185 GAEHIKWPIHLEVSRVTVRAKEAVEAAGGTVR 215
           G   +   + +EVS  +  A  AVE AGG+VR
Sbjct: 121 G--ELARAVTIEVSGASATAVAAVEKAGGSVR 150

[Close]

BLAST of CsaV3_5G027610 vs. Swiss-Prot
Match: sp|Q211G7|RL15_RHOPB (50S ribosomal protein L15 OS=Rhodopseudomonas palustris (strain BisB18) OX=316056 GN=rplO PE=3 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 9.1e-20
Identity = 72/152 (47.37%), Postives = 97/152 (63.82%), Query Frame = 0


Query: 65  LSLNDLRDKV-PRKQKTRKXXXXXXXXXXXXXXXHKGQRARGSGKL-GFEGGQTPLRRRL 124
           + L+D+ D    RK++ R   XXXXXXXXX   X KGQ AR   ++ GFEGGQ PL RRL
Sbjct: 1   MKLSDIADNAGSRKKRMRVGRXXXXXXXXXAGRXXKGQTARSGVRIKGFEGGQMPLHRRL 60

Query: 125 PKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGVRLMGR 184
           PKRGF N F L F  + L ++ + ++A  ID S +I  +TL  +G + ++ +DGVRL+GR
Sbjct: 61  PKRGFNNIFRLDFAEINLDRLQEAVDAKTIDGSGVINAETLVASGVL-RRAKDGVRLLGR 120

Query: 185 GAEHIKWPIHLEVSRVTVRAKEAVEAAGGTVR 215
           G   +K  + +EV   T  A EAVE AGGTV+
Sbjct: 121 G--ELKAKLTIEVHGATKTAIEAVEKAGGTVK 149

[Close]

BLAST of CsaV3_5G027610 vs. Swiss-Prot
Match: sp|Q2RQX9|RL15_RHORT (50S ribosomal protein L15 OS=Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG 4362 / NCIB 8255 / S1) OX=269796 GN=rplO PE=3 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 2.0e-19
Identity = 61/151 (40.40%), Postives = 88/151 (58.28%), Query Frame = 0


Query: 65  LSLNDLRDKV-PRKQKTRKXXXXXXXXXXXXXXXHKGQRAR-GSGKLGFEGGQTPLRRRL 124
           + LN+LRD     K + R                 KGQ++R G    GFEGGQ P+ RRL
Sbjct: 1   MKLNELRDNPGATKNRIRVGRGIGSGKGKTAGRGVKGQKSREGVSINGFEGGQMPIYRRL 60

Query: 125 PKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGVRLMGR 184
           PKRGF NP   +F  V L +I K I+A K+D++ +IT K L + G + ++ +DGVRL+G+
Sbjct: 61  PKRGFNNPTRKSFAVVNLDRIQKAIDAKKLDATAVITEKALIEAGLV-RRSQDGVRLLGK 120

Query: 185 GAEHIKWPIHLEVSRVTVRAKEAVEAAGGTV 214
           G   +K  + +EV+  +  A+E VE AGGT+
Sbjct: 121 GELSVK--VAIEVAGASATAREGVEKAGGTL 148

[Close]

BLAST of CsaV3_5G027610 vs. Swiss-Prot
Match: sp|B2S660|RL15_BRUA1 (50S ribosomal protein L15 OS=Brucella abortus (strain S19) OX=430066 GN=rplO PE=3 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 3.5e-19
Identity = 60/153 (39.22%), Postives = 88/153 (57.52%), Query Frame = 0


Query: 65  LSLNDLRDKVPRKQKTRKXXXXXXXXXXXXXXXH--KGQRARGSGKL-GFEGGQTPLRRR 124
           + LNDLRDK P   K RK                  KGQ++R    + GFEGGQ P+ RR
Sbjct: 1   MKLNDLRDK-PGSVKARKRVGRGIGSGTGKTGGRGVKGQKSRSGVSINGFEGGQMPIYRR 60

Query: 125 LPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGVRLMG 184
           LPKRGF N F+ +F  V LG+I   I+AGK+D+  ++ + +LK  G I ++ +DGVR++ 
Sbjct: 61  LPKRGFTNIFAKSFNVVSLGRIQAAIDAGKLDAKAVVNLDSLKAAGVI-RRAKDGVRILS 120

Query: 185 RGAEHIKWPIHLEVSRVTVRAKEAVEAAGGTVR 215
            G   +K  +  EV+  +  A E +E AGG+++
Sbjct: 121 DG--ELKAKVAFEVAGASKAAVEKIEKAGGSIK 149

[Close]

BLAST of CsaV3_5G027610 vs. TrEMBL
Match: tr|A0A0A0KP79|A0A0A0KP79_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G532450 PE=3 SV=1)

HSP 1 Score: 531.6 bits (1368), Expect = 1.1e-147
Identity = 284/284 (100.00%), Postives = 284/284 (100.00%), Query Frame = 0


Query: 1   MLRRRLCCLLSSSLASVHTKPPPAIVINQALSRPFLEFQQNPFLDRCVGSLPSGNIFGFR 60
           MLRRRLCCLLSSSLASVHTKPPPAIVINQALSRPFLEFQQNPFLDRCVGSLPSGNIFGFR
Sbjct: 1   MLRRRLCCLLSSSLASVHTKPPPAIVINQALSRPFLEFQQNPFLDRCVGSLPSGNIFGFR 60

Query: 61  AFSLLSLNDLRDKVPRKQKTRKXXXXXXXXXXXXXXXHKGQRARGSGKLGFEGGQTPLRR 120
           AFSLLSLNDLRDKVPRKQKTRKXXXXXXXXXXXXXXXHKGQRARGSGKLGFEGGQTPLRR
Sbjct: 61  AFSLLSLNDLRDKVPRKQKTRKXXXXXXXXXXXXXXXHKGQRARGSGKLGFEGGQTPLRR 120

Query: 121 RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGVRLM 180
           RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGVRLM
Sbjct: 121 RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGVRLM 180

Query: 181 GRGAEHIKWPIHLEVSRVTVRAKEAVEAAGGTVRRVYYNKLGLRALLKPEWFEKKGRLLP 240
           GRGAEHIKWPIHLEVSRVTVRAKEAVEAAGGTVRRVYYNKLGLRALLKPEWFEKKGRLLP
Sbjct: 181 GRGAEHIKWPIHLEVSRVTVRAKEAVEAAGGTVRRVYYNKLGLRALLKPEWFEKKGRLLP 240

Query: 241 RAARPPPKQQDKVDSIGRLPAPTKPIPFSVEYEDGGKAASNLST 285
           RAARPPPKQQDKVDSIGRLPAPTKPIPFSVEYEDGGKAASNLST
Sbjct: 241 RAARPPPKQQDKVDSIGRLPAPTKPIPFSVEYEDGGKAASNLST 284

[Close]

BLAST of CsaV3_5G027610 vs. TrEMBL
Match: tr|A0A1S4E3M6|A0A1S4E3M6_CUCME (50S ribosomal protein L15 OS=Cucumis melo OX=3656 GN=LOC103499363 PE=3 SV=1)

HSP 1 Score: 508.8 bits (1309), Expect = 7.7e-141
Identity = 276/284 (97.18%), Postives = 277/284 (97.54%), Query Frame = 0


Query: 1   MLRRRLCCLLSSSLASVHTKPPPAIVINQALSRPFLEFQQNPFLDRCVGSLPSGNIFGFR 60
           MLRR+LC LLSSSLASV TKPPPAIVINQAL  PFLEFQQNP LDRCVGS  SGNIFGFR
Sbjct: 1   MLRRQLCYLLSSSLASVRTKPPPAIVINQALLHPFLEFQQNPCLDRCVGSPLSGNIFGFR 60

Query: 61  AFSLLSLNDLRDKVPRKQKTRKXXXXXXXXXXXXXXXHKGQRARGSGKLGFEGGQTPLRR 120
           AFSLLSLNDLRDKVPRKQKTRKXXXXXXXXXXXXXXXHKGQRARGSGKLGFEGGQTPLRR
Sbjct: 61  AFSLLSLNDLRDKVPRKQKTRKXXXXXXXXXXXXXXXHKGQRARGSGKLGFEGGQTPLRR 120

Query: 121 RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGVRLM 180
           RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGVRLM
Sbjct: 121 RLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGVRLM 180

Query: 181 GRGAEHIKWPIHLEVSRVTVRAKEAVEAAGGTVRRVYYNKLGLRALLKPEWFEKKGRLLP 240
           GRGAEHIKWPIHLEVSRVTVRAKEAVEAAGGTVRRVYYNKLGLRALLKPEWFEKKGRLLP
Sbjct: 181 GRGAEHIKWPIHLEVSRVTVRAKEAVEAAGGTVRRVYYNKLGLRALLKPEWFEKKGRLLP 240

Query: 241 RAARPPPKQQDKVDSIGRLPAPTKPIPFSVEYEDGGKAASNLST 285
           RAARPPPKQQDKVDSIGRLPAPTKPIPFSVEYEDGGKAASNLST
Sbjct: 241 RAARPPPKQQDKVDSIGRLPAPTKPIPFSVEYEDGGKAASNLST 284

[Close]

BLAST of CsaV3_5G027610 vs. TrEMBL
Match: tr|M5VMS3|M5VMS3_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G100400 PE=3 SV=1)

HSP 1 Score: 381.3 bits (978), Expect = 1.9e-102
Identity = 225/294 (76.53%), Postives = 241/294 (81.97%), Query Frame = 0


Query: 1   MLRRRLCCLLSSSL--ASVHTKPPPAIVINQALSRPFLEFQQNPFLDRCVGSLPS---GN 60
           MLRRR+  LLS+++  +S+ TKP         LS   + FQ   FL +C    PS     
Sbjct: 41  MLRRRVTSLLSTTIRSSSIRTKP--------TLSASPISFQSLHFL-QCPNPNPSISNAK 100

Query: 61  IFGF-----RAFSLLSLNDLRDKVPRKQKTRKXXXXXXXXXXXXXXXHKGQRARGSGKLG 120
            FGF     RA+SLLSLNDLR KVPRKQKTRK XXXXXXXXXXXX  HKGQ+ARGSGKLG
Sbjct: 101 GFGFQPEGMRAYSLLSLNDLRGKVPRKQKTRKGXXXXXXXXXXXXRGHKGQKARGSGKLG 160

Query: 121 FEGGQTPLRRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIG 180
           FEGGQTPLRRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIG
Sbjct: 161 FEGGQTPLRRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIG 220

Query: 181 KQIEDGVRLMGRGAEHIKWPIHLEVSRVTVRAKEAVEAAGGTVRRVYYNKLGLRALLKPE 240
           KQI+DGVRLMGRGAE I+WPIH EVSRVTVRAKEAVEAAGG+VRRVYYNKLG RALLKPE
Sbjct: 221 KQIKDGVRLMGRGAEQIQWPIHFEVSRVTVRAKEAVEAAGGSVRRVYYNKLGFRALLKPE 280

Query: 241 WFEKKGRLLPRAARPPPKQQDKVDSIGRLPAPTKPIPFSVEYEDGGKAASNLST 285
           WFEKKGRLLP+AARPPPKQ+DKVDSIGRLPAPTKPIPF  E E     AS+ ST
Sbjct: 281 WFEKKGRLLPKAARPPPKQKDKVDSIGRLPAPTKPIPFFTEEE----VASSSST 321

[Close]

BLAST of CsaV3_5G027610 vs. TrEMBL
Match: tr|A0A2P5DU77|A0A2P5DU77_PARAD (Ribosomal protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_031550 PE=3 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 3.2e-102
Identity = 210/281 (74.73%), Postives = 232/281 (82.56%), Query Frame = 0


Query: 1   MLRRRLCCLLSSSLAS--VHTKPPPAIVINQALSRPFLEFQQNPFLDRCVGSLPSGNIFG 60
           MLRRRLC + ++ + +  + T PPP +        PF   +   FL   +GS       G
Sbjct: 1   MLRRRLCSIFNAYVRTQLIATPPPPPV--------PFWTLRFVQFLKPRLGSDEGFGFGG 60

Query: 61  FRAFSLLSLNDLRDKVPRKQKTRKXXXXXXXXXXXXXXXHKGQRARGSGKLGFEGGQTPL 120
            RA+SLLSLNDLR KVPRKQKTRK  XXXXXXXXXX   HKGQ+ARGSG+LGFEGGQTPL
Sbjct: 61  LRAYSLLSLNDLRGKVPRKQKTRKGRXXXXXXXXXXGRGHKGQKARGSGRLGFEGGQTPL 120

Query: 121 RRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQIEDGVR 180
           RRRLPKRGFKNPFSLTFQPVGLGKIAKLIN GKIDS ELITMKTLKDTGA+GKQI+DGVR
Sbjct: 121 RRRLPKRGFKNPFSLTFQPVGLGKIAKLINEGKIDSHELITMKTLKDTGAVGKQIKDGVR 180

Query: 181 LMGRGAEHIKWPIHLEVSRVTVRAKEAVEAAGGTVRRVYYNKLGLRALLKPEWFEKKGRL 240
           LMGRGA+ IKWPIHLEVSRVTVRAK AVEAAGG+VRRVYYNKLG +ALLKPEWFEKKGRL
Sbjct: 181 LMGRGADQIKWPIHLEVSRVTVRAKAAVEAAGGSVRRVYYNKLGFQALLKPEWFEKKGRL 240

Query: 241 LPRAARPPPKQQDKVDSIGRLPAPTKPIPFSVEYEDGGKAA 280
           LP+AARPPPKQ+DKVDSIGRLPAPTKPIPFSVE ++   +A
Sbjct: 241 LPKAARPPPKQKDKVDSIGRLPAPTKPIPFSVEGKESALSA 273

[Close]

BLAST of CsaV3_5G027610 vs. TrEMBL
Match: tr|A0A251NT27|A0A251NT27_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G163200 PE=3 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 4.1e-102
Identity = 222/292 (76.03%), Postives = 238/292 (81.51%), Query Frame = 0


Query: 1   MLRRRLCCLLSSSLASVHTKPPPAIVINQALSRPFLEFQQNPFLDRCVGSLPS-GNIFGF 60
           MLRRRL  LLS+   ++ TKP         LS   + FQ    L +C    PS G++ GF
Sbjct: 1   MLRRRLASLLST---AIRTKP--------TLSPSPISFQSLHLL-QCPNPNPSIGDVKGF 60

Query: 61  -------RAFSLLSLNDLRDKVPRKQKTRKXXXXXXXXXXXXXXXHKGQRARGSGKLGFE 120
                  RA+SLLSLNDLR KVPRKQKTRK  XXXXXXXXXX   HKGQ+ARGSGKLGFE
Sbjct: 61  GFQPQGLRAYSLLSLNDLRGKVPRKQKTRKGRXXXXXXXXXXGRGHKGQKARGSGKLGFE 120

Query: 121 GGQTPLRRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQ 180
           GGQTPLRRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQ
Sbjct: 121 GGQTPLRRRLPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDTGAIGKQ 180

Query: 181 IEDGVRLMGRGAEHIKWPIHLEVSRVTVRAKEAVEAAGGTVRRVYYNKLGLRALLKPEWF 240
           I+DGVRLMGRGAE I+WPIHLEVSRVTVRAKEAVEAAGG+VRRVYYNKLG RALLKPEWF
Sbjct: 181 IKDGVRLMGRGAEQIQWPIHLEVSRVTVRAKEAVEAAGGSVRRVYYNKLGFRALLKPEWF 240

Query: 241 EKKGRLLPRAARPPPKQQDKVDSIGRLPAPTKPIPFSVEYEDGGKAASNLST 285
           EKKGRLLP+AARPPPKQ+DKVDSIGRLPAPTKP+PF  E E     AS+ ST
Sbjct: 241 EKKGRLLPKAARPPPKQKDKVDSIGRLPAPTKPVPFFTEEE----VASSSST 276

The following BLAST results are available for this feature:

BLAST of CsaV3_5G027610 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004142813.1	1.7e-147	100.00	PREDICTED: 54S ribosomal protein L10, mitochondrial [Cucumis sativus] >XP_011655...	[more]
XP_008460571.1	1.2e-140	97.18	PREDICTED: 50S ribosomal protein L15 [Cucumis melo] >XP_016902580.1 PREDICTED: 5...	[more]
XP_022933073.1	2.7e-129	90.43	uncharacterized protein LOC111439779 [Cucurbita moschata] >XP_022933074.1 unchar...	[more]
XP_023530556.1	3.9e-128	89.72	uncharacterized protein LOC111793072 [Cucurbita pepo subsp. pepo] >XP_023530565....	[more]
XP_022998443.1	1.5e-127	89.36	uncharacterized protein LOC111493075 [Cucurbita maxima] >XP_022998452.1 uncharac...	[more]

BLAST of CsaV3_5G027610 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G64670.1	5.5e-100	73.43	Ribosomal protein L18e/L15 superfamily protein	[more]
AT3G25920.1	8.7e-05	28.26	ribosomal protein L15	[more]

BLAST of CsaV3_5G027610 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P36520\|RM10_YEAST	4.1e-20	38.96	54S ribosomal protein L10, mitochondrial OS=Saccharomyces cerevisiae (strain ATC...	[more]
sp\|A9H3K5\|RL15_GLUDA	9.1e-20	48.03	50S ribosomal protein L15 OS=Gluconacetobacter diazotrophicus (strain ATCC 49037...	[more]
sp\|Q211G7\|RL15_RHOPB	9.1e-20	47.37	50S ribosomal protein L15 OS=Rhodopseudomonas palustris (strain BisB18) OX=31605...	[more]
sp\|Q2RQX9\|RL15_RHORT	2.0e-19	40.40	50S ribosomal protein L15 OS=Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1....	[more]
sp\|B2S660\|RL15_BRUA1	3.5e-19	39.22	50S ribosomal protein L15 OS=Brucella abortus (strain S19) OX=430066 GN=rplO PE=...	[more]

BLAST of CsaV3_5G027610 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KP79\|A0A0A0KP79_CUCSA	1.1e-147	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G532450 PE=3 SV=1	[more]
tr\|A0A1S4E3M6\|A0A1S4E3M6_CUCME	7.7e-141	97.18	50S ribosomal protein L15 OS=Cucumis melo OX=3656 GN=LOC103499363 PE=3 SV=1	[more]
tr\|M5VMS3\|M5VMS3_PRUPE	1.9e-102	76.53	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G100400 PE=3 SV=1	[more]
tr\|A0A2P5DU77\|A0A2P5DU77_PARAD	3.2e-102	74.73	Ribosomal protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_031550 PE=3 SV=...	[more]
tr\|A0A251NT27\|A0A251NT27_PRUPE	4.1e-102	76.03	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G163200 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0015934	large ribosomal subunit

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **INTERPRO**
Term	Definition
IPR036227	L18e/L15P_sf
IPR030878	Ribosomal_L15
IPR005749	Ribosomal_L15_bac-type
IPR021131	Ribosomal_L18e/L15P

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006412	translation
cellular_component	GO:0015934	large ribosomal subunit
molecular_function	GO:0003735	structural constituent of ribosome

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_5G027610.1	CsaV3_5G027610.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021131	Ribosomal protein L18e/L15P	PFAM	PF00828	Ribosomal_L27A	coord: 90..213 e-value: 5.0E-30 score: 104.6
IPR005749	Ribosomal protein L15, bacterial-type	TIGRFAM	TIGR01071	TIGR01071	coord: 67..213 e-value: 2.4E-38 score: 129.2
IPR005749	Ribosomal protein L15, bacterial-type	PANTHER	PTHR12934	50S RIBOSOMAL PROTEIN L15	coord: 13..270
None	No IPR available	GENE3D	G3DSA:3.100.10.10		coord: 135..255 e-value: 1.9E-39 score: 136.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 239..284
None	No IPR available	PANTHER	PTHR12934:SF12	39S RIBOSOMAL PROTEIN L15, MITOCHONDRIAL	coord: 13..270
IPR030878	Ribosomal protein L15	HAMAP	MF_01341	Ribosomal_L15	coord: 67..216 score: 19.086
IPR036227	Ribosomal L18e/L15P superfamily	SUPERFAMILY	SSF52080	Ribosomal proteins L15p and L18e	coord: 75..213

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_5G027610	CSPI05G18790	Wild cucumber (PI 183967)	cpicucB284
CsaV3_5G027610	Cucsa.011740	Cucumber (Gy14) v1	cgycucB300
CsaV3_5G027610	CmaCh04G018900	Cucurbita maxima (Rimu)	cmacucB0898
CsaV3_5G027610	CmoCh04G019940	Cucurbita moschata (Rifu)	cmocucB0892
CsaV3_5G027610	Cp4.1LG01g17050	Cucurbita pepo (Zucchini)	cpecucB0560
CsaV3_5G027610	CsGy5G018320	Cucumber (Gy14) v2	cgybcucB232
CsaV3_5G027610	Carg26169	Silver-seed gourd	carcucB0311
CsaV3_5G027610	Cla001875	Watermelon (97103) v1	cucwmB460
CsaV3_5G027610	MELO3C022914	Melon (DHL92) v3.5.1	cucmeB384
CsaV3_5G027610	Lsi11G001070	Bottle gourd (USVL1VR-Ls)	cuclsiB361
CsaV3_5G027610	MELO3C022914.2	Melon (DHL92) v3.6.1	cucmedB378
CsaV3_5G027610	Cla97C11G206400	Watermelon (97103) v2	cucwmbB379

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_5G027610	Watermelon (Charleston Gray)	cucwcgB381
CsaV3_5G027610	Wax gourd	cucwgoB504